Result of FASTA (omim) for
pFN21AE6608
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE6608, 304 aa
1>>>pF1KE6608 304 - 304 aa - 304 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.8866+/-0.000419; mu= 17.5417+/- 0.026
mean_var=60.6144+/-12.495, 0's: 0 Z-trim(111.1): 264 B-trim: 859 in 1/51
Lambda= 0.164735
statistics sampled from 19361 (19644) to 19361 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.597), E-opt: 0.2 (0.23), width: 16
Scan time: 6.150
The best scores are: opt bits E(85289)
NP_060345 (OMIM: 205950,610819) solute carrier fam ( 304) 2009 486.1 3.7e-137
XP_011532171 (OMIM: 205950,610819) PREDICTED: solu ( 298) 1860 450.7 1.7e-126
XP_006713277 (OMIM: 205950,610819) PREDICTED: solu ( 300) 1860 450.7 1.7e-126
XP_016862199 (OMIM: 205950,610819) PREDICTED: solu ( 237) 1379 336.3 3.6e-92
NP_005975 (OMIM: 190315,615182) tricarboxylate tra ( 311) 367 95.9 1.1e-19
NP_001243463 (OMIM: 190315,615182) tricarboxylate ( 318) 349 91.6 2.2e-18
NP_000378 (OMIM: 212138,613698) mitochondrial carn ( 301) 341 89.7 7.9e-18
XP_016876013 (OMIM: 610793) PREDICTED: kidney mito ( 291) 332 87.5 3.4e-17
NP_001010875 (OMIM: 610793) kidney mitochondrial c ( 291) 332 87.5 3.4e-17
NP_001034444 (OMIM: 615064) mitochondrial basic am ( 303) 324 85.6 1.3e-16
XP_005266379 (OMIM: 610793) PREDICTED: kidney mito ( 254) 322 85.1 1.6e-16
XP_006719856 (OMIM: 610793) PREDICTED: kidney mito ( 293) 322 85.2 1.8e-16
XP_005266378 (OMIM: 610793) PREDICTED: kidney mito ( 293) 322 85.2 1.8e-16
XP_006719857 (OMIM: 610793) PREDICTED: kidney mito ( 293) 322 85.2 1.8e-16
XP_016876012 (OMIM: 610793) PREDICTED: kidney mito ( 293) 322 85.2 1.8e-16
XP_011534745 (OMIM: 615064) PREDICTED: mitochondri ( 348) 308 81.9 2e-15
XP_006720101 (OMIM: 615064) PREDICTED: mitochondri ( 350) 308 81.9 2e-15
XP_016876468 (OMIM: 615064) PREDICTED: mitochondri ( 356) 308 81.9 2.1e-15
XP_011534746 (OMIM: 615064) PREDICTED: mitochondri ( 297) 306 81.4 2.5e-15
XP_011510372 (OMIM: 603667,612949) PREDICTED: calc ( 587) 309 82.3 2.6e-15
NP_003696 (OMIM: 603667,612949) calcium-binding mi ( 678) 309 82.3 2.9e-15
XP_006720102 (OMIM: 615064) PREDICTED: mitochondri ( 342) 303 80.7 4.6e-15
NP_001137252 (OMIM: 610820) solute carrier family ( 359) 299 79.7 9.2e-15
NP_061331 (OMIM: 610821) solute carrier family 25 ( 338) 294 78.5 2e-14
NP_001308169 (OMIM: 610820) solute carrier family ( 336) 293 78.3 2.3e-14
NP_057100 (OMIM: 610820) solute carrier family 25 ( 351) 293 78.3 2.4e-14
XP_011523182 (OMIM: 610820) PREDICTED: solute carr ( 365) 269 72.6 1.3e-12
XP_011523184 (OMIM: 610820) PREDICTED: solute carr ( 342) 263 71.2 3.3e-12
NP_001308170 (OMIM: 610820) solute carrier family ( 357) 263 71.2 3.4e-12
NP_001274316 (OMIM: 190315,615182) tricarboxylate ( 208) 248 67.5 2.6e-11
XP_005263263 (OMIM: 113730,601665) PREDICTED: mito ( 306) 246 67.1 5e-11
NP_068605 (OMIM: 113730,601665) mitochondrial brow ( 307) 246 67.1 5e-11
NP_001269127 (OMIM: 300242) brain mitochondrial ca ( 290) 244 66.6 6.7e-11
XP_016885425 (OMIM: 300242) PREDICTED: brain mitoc ( 306) 244 66.6 6.9e-11
NP_001269125 (OMIM: 300242) brain mitochondrial ca ( 322) 244 66.6 7.2e-11
NP_001269124 (OMIM: 300242) brain mitochondrial ca ( 325) 244 66.6 7.3e-11
XP_011529704 (OMIM: 300242) PREDICTED: brain mitoc ( 334) 244 66.7 7.5e-11
XP_016885428 (OMIM: 300242) PREDICTED: brain mitoc ( 338) 244 66.7 7.5e-11
XP_016885427 (OMIM: 300242) PREDICTED: brain mitoc ( 341) 244 66.7 7.6e-11
XP_016885426 (OMIM: 300242) PREDICTED: brain mitoc ( 350) 244 66.7 7.7e-11
XP_005259918 (OMIM: 610823) PREDICTED: mitochondri ( 318) 240 65.7 1.4e-10
XP_011526239 (OMIM: 610823) PREDICTED: mitochondri ( 318) 240 65.7 1.4e-10
NP_001308473 (OMIM: 610823) mitochondrial coenzyme ( 318) 240 65.7 1.4e-10
NP_848621 (OMIM: 610823) mitochondrial coenzyme A ( 318) 240 65.7 1.4e-10
NP_003346 (OMIM: 601693,607447) mitochondrial unco ( 309) 239 65.4 1.6e-10
XP_016882159 (OMIM: 610823) PREDICTED: mitochondri ( 382) 240 65.7 1.6e-10
XP_016867153 (OMIM: 603471,603859,605814) PREDICTE ( 391) 231 63.6 7.2e-10
XP_016867154 (OMIM: 603471,603859,605814) PREDICTE ( 391) 231 63.6 7.2e-10
NP_775742 (OMIM: 611037,616794) S-adenosylmethioni ( 274) 228 62.8 8.9e-10
XP_016867152 (OMIM: 603471,603859,605814) PREDICTE ( 672) 231 63.8 1.1e-09
>>NP_060345 (OMIM: 205950,610819) solute carrier family (304 aa)
initn: 2009 init1: 2009 opt: 2009 Z-score: 2583.5 bits: 486.1 E(85289): 3.7e-137
Smith-Waterman score: 2009; 100.0% identity (100.0% similar) in 304 aa overlap (1-304:1-304)
10 20 30 40 50 60
pF1KE6 MIQNSRPSLLQPQDVGDTVETLMLHPVIKAFLCGSISGTCSTLLFQPLDLLKTRLQTLQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 MIQNSRPSLLQPQDVGDTVETLMLHPVIKAFLCGSISGTCSTLLFQPLDLLKTRLQTLQP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 SDHGSRRVGMLAVLLKVVRTESLLGLWKGMSPSIVRCVPGVGIYFGTLYSLKQYFLRGHP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 SDHGSRRVGMLAVLLKVVRTESLLGLWKGMSPSIVRCVPGVGIYFGTLYSLKQYFLRGHP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 PTALESVMLGVGSRSVAGVCMSPITVIKTRYESGKYGYESIYAALRSIYHSEGHRGLFSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 PTALESVMLGVGSRSVAGVCMSPITVIKTRYESGKYGYESIYAALRSIYHSEGHRGLFSG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 LTATLLRDAPFSGIYLMFYNQTKNIVPHDQVDATLIPITNFSCGIFAGILASLVTQPADV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 LTATLLRDAPFSGIYLMFYNQTKNIVPHDQVDATLIPITNFSCGIFAGILASLVTQPADV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE6 IKTHMQLYPLKFQWIGQAVTLIFKDYGLRGFFQGGIPRALRRTLMAAMAWTVYEEMMAKM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 IKTHMQLYPLKFQWIGQAVTLIFKDYGLRGFFQGGIPRALRRTLMAAMAWTVYEEMMAKM
250 260 270 280 290 300
pF1KE6 GLKS
::::
NP_060 GLKS
>>XP_011532171 (OMIM: 205950,610819) PREDICTED: solute c (298 aa)
initn: 1860 init1: 1860 opt: 1860 Z-score: 2392.2 bits: 450.7 E(85289): 1.7e-126
Smith-Waterman score: 1860; 100.0% identity (100.0% similar) in 281 aa overlap (24-304:18-298)
10 20 30 40 50 60
pF1KE6 MIQNSRPSLLQPQDVGDTVETLMLHPVIKAFLCGSISGTCSTLLFQPLDLLKTRLQTLQP
:::::::::::::::::::::::::::::::::::::
XP_011 MACTREAKYEENMRHHQLHPVIKAFLCGSISGTCSTLLFQPLDLLKTRLQTLQP
10 20 30 40 50
70 80 90 100 110 120
pF1KE6 SDHGSRRVGMLAVLLKVVRTESLLGLWKGMSPSIVRCVPGVGIYFGTLYSLKQYFLRGHP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SDHGSRRVGMLAVLLKVVRTESLLGLWKGMSPSIVRCVPGVGIYFGTLYSLKQYFLRGHP
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE6 PTALESVMLGVGSRSVAGVCMSPITVIKTRYESGKYGYESIYAALRSIYHSEGHRGLFSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PTALESVMLGVGSRSVAGVCMSPITVIKTRYESGKYGYESIYAALRSIYHSEGHRGLFSG
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE6 LTATLLRDAPFSGIYLMFYNQTKNIVPHDQVDATLIPITNFSCGIFAGILASLVTQPADV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LTATLLRDAPFSGIYLMFYNQTKNIVPHDQVDATLIPITNFSCGIFAGILASLVTQPADV
180 190 200 210 220 230
250 260 270 280 290 300
pF1KE6 IKTHMQLYPLKFQWIGQAVTLIFKDYGLRGFFQGGIPRALRRTLMAAMAWTVYEEMMAKM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IKTHMQLYPLKFQWIGQAVTLIFKDYGLRGFFQGGIPRALRRTLMAAMAWTVYEEMMAKM
240 250 260 270 280 290
pF1KE6 GLKS
::::
XP_011 GLKS
>>XP_006713277 (OMIM: 205950,610819) PREDICTED: solute c (300 aa)
initn: 1860 init1: 1860 opt: 1860 Z-score: 2392.2 bits: 450.7 E(85289): 1.7e-126
Smith-Waterman score: 1860; 100.0% identity (100.0% similar) in 281 aa overlap (24-304:20-300)
10 20 30 40 50 60
pF1KE6 MIQNSRPSLLQPQDVGDTVETLMLHPVIKAFLCGSISGTCSTLLFQPLDLLKTRLQTLQP
:::::::::::::::::::::::::::::::::::::
XP_006 MSETRWKRLWYEENMRHHQLHPVIKAFLCGSISGTCSTLLFQPLDLLKTRLQTLQP
10 20 30 40 50
70 80 90 100 110 120
pF1KE6 SDHGSRRVGMLAVLLKVVRTESLLGLWKGMSPSIVRCVPGVGIYFGTLYSLKQYFLRGHP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 SDHGSRRVGMLAVLLKVVRTESLLGLWKGMSPSIVRCVPGVGIYFGTLYSLKQYFLRGHP
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE6 PTALESVMLGVGSRSVAGVCMSPITVIKTRYESGKYGYESIYAALRSIYHSEGHRGLFSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PTALESVMLGVGSRSVAGVCMSPITVIKTRYESGKYGYESIYAALRSIYHSEGHRGLFSG
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE6 LTATLLRDAPFSGIYLMFYNQTKNIVPHDQVDATLIPITNFSCGIFAGILASLVTQPADV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LTATLLRDAPFSGIYLMFYNQTKNIVPHDQVDATLIPITNFSCGIFAGILASLVTQPADV
180 190 200 210 220 230
250 260 270 280 290 300
pF1KE6 IKTHMQLYPLKFQWIGQAVTLIFKDYGLRGFFQGGIPRALRRTLMAAMAWTVYEEMMAKM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 IKTHMQLYPLKFQWIGQAVTLIFKDYGLRGFFQGGIPRALRRTLMAAMAWTVYEEMMAKM
240 250 260 270 280 290
pF1KE6 GLKS
::::
XP_006 GLKS
300
>>XP_016862199 (OMIM: 205950,610819) PREDICTED: solute c (237 aa)
initn: 1372 init1: 1372 opt: 1379 Z-score: 1775.8 bits: 336.3 E(85289): 3.6e-92
Smith-Waterman score: 1379; 96.8% identity (97.7% similar) in 217 aa overlap (1-217:1-217)
10 20 30 40 50 60
pF1KE6 MIQNSRPSLLQPQDVGDTVETLMLHPVIKAFLCGSISGTCSTLLFQPLDLLKTRLQTLQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MIQNSRPSLLQPQDVGDTVETLMLHPVIKAFLCGSISGTCSTLLFQPLDLLKTRLQTLQP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 SDHGSRRVGMLAVLLKVVRTESLLGLWKGMSPSIVRCVPGVGIYFGTLYSLKQYFLRGHP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SDHGSRRVGMLAVLLKVVRTESLLGLWKGMSPSIVRCVPGVGIYFGTLYSLKQYFLRGHP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 PTALESVMLGVGSRSVAGVCMSPITVIKTRYESGKYGYESIYAALRSIYHSEGHRGLFSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PTALESVMLGVGSRSVAGVCMSPITVIKTRYESGKYGYESIYAALRSIYHSEGHRGLFSG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 LTATLLRDAPFSGIYLMFYNQTKNIVPHDQVDATLIPITNFSCGIFAGILASLVTQPADV
:::::::::::::::::::::::::::: . :.:
XP_016 LTATLLRDAPFSGIYLMFYNQTKNIVPHGLWTTWLLPRWHPPSPPQNSNGSNGVDGV
190 200 210 220 230
250 260 270 280 290 300
pF1KE6 IKTHMQLYPLKFQWIGQAVTLIFKDYGLRGFFQGGIPRALRRTLMAAMAWTVYEEMMAKM
>>NP_005975 (OMIM: 190315,615182) tricarboxylate transpo (311 aa)
initn: 216 init1: 148 opt: 367 Z-score: 474.3 bits: 95.9 E(85289): 1.1e-19
Smith-Waterman score: 367; 27.1% identity (62.7% similar) in 284 aa overlap (23-297:22-301)
10 20 30 40 50 60
pF1KE6 MIQNSRPSLLQPQDVGDTVETLMLHPVIKAFLCGSISGTCSTLLFQPLDLLKTRLQTLQP
. :: ::.: :...: . : . .::.:: :.
NP_005 MPAPRAPRALAAAAPASGKAKLTHPG-KAILAGGLAGGIEICITFPTEYVKTQLQ-LDE
10 20 30 40 50
70 80 90 100 110 120
pF1KE6 SDHGSRRVGMLAVLLKVVRTESLLGLWKGMSPSIVRCVPGVGIYFGTLYSLKQYFLRGHP
.: : :. . ..::....:::..:.: . .: ... :: . :.... ..
NP_005 RSHPPRYRGIGDCVRQTVRSHGVLGLYRGLSSLLYGSIPKAAVRFGMFEFLSNHMRDAQG
60 70 80 90 100 110
130 140 150 160 170
pF1KE6 PT-ALESVMLGVGS---RSVAGVCMSPITVIKTRY----ESGKYGYESIYAALRSIYHSE
. .... :.:. ..:. :: :. .::... : . :.... ..: : . .
NP_005 RLDSTRGLLCGLGAGVAEAVVVVC--PMETIKVKFIHDQTSPNPKYRGFFHGVREIVREQ
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE6 GHRGLFSGLTATLLRDAPFSGIYLMFYNQTKNIVPHDQVDATLIPITNFSCGIFAGILAS
: .: ..:::::.:... ..: .. ... .: :. . . :. . : .:: .
NP_005 GLKGTYQGLTATVLKQGSNQAIRFFVMTSLRNWYRGDNPNKPMNPLITGVFGAIAGAASV
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE6 LVTQPADVIKTHMQ-LYPLKFQWIGQAVTLIFKDYGLRGFFQGGIPRALRRTLMAAMAWT
. . : :::::.:: : :.. . :.: ::..:..: .:: : : .:....
NP_005 FGNTPLDVIKTRMQGLEAHKYRNTWDCGLQILKKEGLKAFYKGTVPRLGRVCLDVAIVFV
240 250 260 270 280 290
300
pF1KE6 VYEEMMAKMGLKS
.:.:..
NP_005 IYDEVVKLLNKVWKTD
300 310
>>NP_001243463 (OMIM: 190315,615182) tricarboxylate tran (318 aa)
initn: 216 init1: 148 opt: 349 Z-score: 451.0 bits: 91.6 E(85289): 2.2e-18
Smith-Waterman score: 349; 27.4% identity (62.3% similar) in 281 aa overlap (26-297:35-308)
10 20 30 40 50
pF1KE6 MIQNSRPSLLQPQDVGDTVETLMLHPVIKAFLCGSISGTCSTLLFQPLDLLKTRL
:: . : :.: : :. : . .::.:
NP_001 ALARRPRRPKSGTGEGPERQRPGGSLRSGFPVPAGGLAGGIE-ICITF---PTEYVKTQL
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE6 QTLQPSDHGSRRVGMLAVLLKVVRTESLLGLWKGMSPSIVRCVPGVGIYFGTLYSLKQYF
: :. .: : :. . ..::....:::..:.: . .: ... :: . :....
NP_001 Q-LDERSHPPRYRGIGDCVRQTVRSHGVLGLYRGLSSLLYGSIPKAAVRFGMFEFLSNHM
70 80 90 100 110
120 130 140 150 160
pF1KE6 LRGHPPT-ALESVMLGVGS---RSVAGVCMSPITVIKTRY----ESGKYGYESIYAALRS
.. . .... :.:. ..:. :: :. .::... : . :.... ..:
NP_001 RDAQGRLDSTRGLLCGLGAGVAEAVVVVC--PMETIKVKFIHDQTSPNPKYRGFFHGVRE
120 130 140 150 160 170
170 180 190 200 210 220
pF1KE6 IYHSEGHRGLFSGLTATLLRDAPFSGIYLMFYNQTKNIVPHDQVDATLIPITNFSCGIFA
: . .: .: ..:::::.:... ..: .. ... .: :. . . :. . : .:
NP_001 IVREQGLKGTYQGLTATVLKQGSNQAIRFFVMTSLRNWYRGDNPNKPMNPLITGVFGAIA
180 190 200 210 220 230
230 240 250 260 270 280
pF1KE6 GILASLVTQPADVIKTHMQ-LYPLKFQWIGQAVTLIFKDYGLRGFFQGGIPRALRRTLMA
: . . . : :::::.:: : :.. . :.: ::..:..: .:: : : .
NP_001 GAASVFGNTPLDVIKTRMQGLEAHKYRNTWDCGLQILKKEGLKAFYKGTVPRLGRVCLDV
240 250 260 270 280 290
290 300
pF1KE6 AMAWTVYEEMMAKMGLKS
:.....:.:..
NP_001 AIVFVIYDEVVKLLNKVWKTD
300 310
>>NP_000378 (OMIM: 212138,613698) mitochondrial carnitin (301 aa)
initn: 278 init1: 140 opt: 341 Z-score: 441.1 bits: 89.7 E(85289): 7.9e-18
Smith-Waterman score: 341; 29.5% identity (60.2% similar) in 264 aa overlap (28-274:11-268)
10 20 30 40 50 60
pF1KE6 MIQNSRPSLLQPQDVGDTVETLMLHPVIKAFLCGSISGTCSTLLFQPLDLLKTRLQTLQP
.: .: :...:.: ... .::: .:.:::: :
NP_000 MADQPKPISPLKNLLAGGFGGVCLVFVGHPLDTVKVRLQTQPP
10 20 30 40
70 80 90 100 110
pF1KE6 SDHGSRRV--GMLAVLLKVVRTESLLGLWKGMSPSIVRCVPGVGI-YFGTLYSLKQYFLR
: :. . : . . :.. :.. ::..::. :. .: .. .:: ..: . . .
NP_000 SLPGQPPMYSGTFDCFRKTLFREGITGLYRGMAAPIIGVTPMFAVCFFG--FGLGKKLQQ
50 60 70 80 90 100
120 130 140 150 160
pF1KE6 GHPPTALESVML-GVGSRS---VAGVCMSPITVIKTRYE----SGKYGYESIYAALRSIY
:: .: .: ..: : ..:. :.: :: . ::. : . ...:
NP_000 KHPEDVLSYPQLFAAGMLSGVFTTGI-MTPGERIKCLLQIQASSGESKYTGTLDCAKKLY
110 120 130 140 150 160
170 180 190 200 210 220
pF1KE6 HSEGHRGLFSGLTATLLRDAPFSGIYLMFYNQTKNI-VPHDQVDATLIPITNFSCGIFAG
. : ::...: . ::.::.: ::.:.: :. ::: .:. . . : . : .::
NP_000 QEFGIRGIYKGTVLTLMRDVPASGMYFMTYEWLKNIFTPEGKRVSELSAPRILVAGGIAG
170 180 190 200 210 220
230 240 250 260 270 280
pF1KE6 ILASLVTQPADVIKTHMQL-----YPLKFQWIGQAVTLIFKDYGLRGFFQGGIPRALRRT
:. :. : ::.:...: :: :. ... ...: :. ....:
NP_000 IFNWAVAIPPDVLKSRFQTAPPGKYPNGFR---DVLRELIRDEGVTSLYKGFNAVMIRAF
230 240 250 260 270
290 300
pF1KE6 LMAAMAWTVYEEMMAKMGLKS
NP_000 PANAACFLGFEVAMKFLNWATPNL
280 290 300
>>XP_016876013 (OMIM: 610793) PREDICTED: kidney mitochon (291 aa)
initn: 234 init1: 110 opt: 332 Z-score: 429.7 bits: 87.5 E(85289): 3.4e-17
Smith-Waterman score: 332; 29.6% identity (60.3% similar) in 287 aa overlap (29-296:7-286)
10 20 30 40 50
pF1KE6 MIQNSRPSLLQPQDVGDTVETLMLHPVIKAFLCG---SISGTCSTLLFQPLDLLKTRLQT
: :. : ::.. :.:. :.:: :::::
XP_016 MSALNWKPFVYGGLASITAECGTF---PIDLTKTRLQI
10 20 30
60 70 80 90 100 110
pF1KE6 L-QPSDHGSRRV---GMLAVLLKVVRTESLLGLWKGMSPSIVRCVPGVGIYFGTLYSLKQ
: .: ... ::: .:... : :.: .:..:..:...: . : .:: :::.
XP_016 QGQTNDAKFKEIRYRGMLHALVRIGREEGLKALYSGIAPAMLRQASYGTIKIGTYQSLKR
40 50 60 70 80 90
120 130 140 150 160 170
pF1KE6 YFL-RGHPPTALESVMLGVGSRSVAGVCMSPITVIKTRYESGKYGYES-IYAALRSIYHS
:. : . : .:. :. : .... .: :.: :... . .. . . . .::..
XP_016 LFIERPEDETLPINVICGILSGVISSTIANPTDVLKIRMQAQSNTIQGGMIGNFMNIYQQ
100 110 120 130 140 150
180 190 200 210 220
pF1KE6 EGHRGLFSGLTATLLRDAPFSGIYLMFYNQTK-NIVPHDQVDATLIP--ITNFSCGIFAG
:: :::..:.. : : : :. : :. :: ... . :. ...:.::. ::
XP_016 EGTRGLWKGVSLTAQRAAIVVGVELPVYDITKKHLILSGLMGDTVYTHFLSSFTCGL-AG
160 170 180 190 200 210
230 240 250 260 270 280
pF1KE6 ILASLVTQPADVIKTHMQ----LYPLKFQ-WIGQAVTLI--FKDYGLRGFFQGGIPRALR
::: .:.::..:.:. : . . . : :. .:. :. ....: : ::
XP_016 ALAS---NPVDVVRTRMMNQRVLRDGRCSGYTGTLDCLLQTWKNEGFFALYKGFWPNWLR
220 230 240 250 260 270
290 300
pF1KE6 RTLMAAMAWTVYEEMMAKMGLKS
. ...::..
XP_016 LGPWNIIFFVTYEQLKKLDL
280 290
>>NP_001010875 (OMIM: 610793) kidney mitochondrial carri (291 aa)
initn: 234 init1: 110 opt: 332 Z-score: 429.7 bits: 87.5 E(85289): 3.4e-17
Smith-Waterman score: 332; 29.6% identity (60.3% similar) in 287 aa overlap (29-296:7-286)
10 20 30 40 50
pF1KE6 MIQNSRPSLLQPQDVGDTVETLMLHPVIKAFLCG---SISGTCSTLLFQPLDLLKTRLQT
: :. : ::.. :.:. :.:: :::::
NP_001 MSALNWKPFVYGGLASITAECGTF---PIDLTKTRLQI
10 20 30
60 70 80 90 100 110
pF1KE6 L-QPSDHGSRRV---GMLAVLLKVVRTESLLGLWKGMSPSIVRCVPGVGIYFGTLYSLKQ
: .: ... ::: .:... : :.: .:..:..:...: . : .:: :::.
NP_001 QGQTNDAKFKEIRYRGMLHALVRIGREEGLKALYSGIAPAMLRQASYGTIKIGTYQSLKR
40 50 60 70 80 90
120 130 140 150 160 170
pF1KE6 YFL-RGHPPTALESVMLGVGSRSVAGVCMSPITVIKTRYESGKYGYES-IYAALRSIYHS
:. : . : .:. :. : .... .: :.: :... . .. . . . .::..
NP_001 LFIERPEDETLPINVICGILSGVISSTIANPTDVLKIRMQAQSNTIQGGMIGNFMNIYQQ
100 110 120 130 140 150
180 190 200 210 220
pF1KE6 EGHRGLFSGLTATLLRDAPFSGIYLMFYNQTK-NIVPHDQVDATLIP--ITNFSCGIFAG
:: :::..:.. : : : :. : :. :: ... . :. ...:.::. ::
NP_001 EGTRGLWKGVSLTAQRAAIVVGVELPVYDITKKHLILSGLMGDTVYTHFLSSFTCGL-AG
160 170 180 190 200 210
230 240 250 260 270 280
pF1KE6 ILASLVTQPADVIKTHMQ----LYPLKFQ-WIGQAVTLI--FKDYGLRGFFQGGIPRALR
::: .:.::..:.:. : . . . : :. .:. :. ....: : ::
NP_001 ALAS---NPVDVVRTRMMNQRVLRDGRCSGYTGTLDCLLQTWKNEGFFALYKGFWPNWLR
220 230 240 250 260 270
290 300
pF1KE6 RTLMAAMAWTVYEEMMAKMGLKS
. ...::..
NP_001 LGPWNIIFFVTYEQLKKLDL
280 290
>>NP_001034444 (OMIM: 615064) mitochondrial basic amino (303 aa)
initn: 149 init1: 78 opt: 324 Z-score: 419.2 bits: 85.6 E(85289): 1.3e-16
Smith-Waterman score: 324; 28.9% identity (57.4% similar) in 263 aa overlap (31-281:5-257)
10 20 30 40 50 60
pF1KE6 MIQNSRPSLLQPQDVGDTVETLMLHPVIKAFLCGSISGTCSTLLFQPLDLLKTRLQTLQP
:: : .:. ..:. .:.: .:.::: .:
NP_001 MALDFLAGCAGGVAGVLVGHPFDTVKVRLQ-VQS
10 20 30
70 80 90 100 110
pF1KE6 SDHGSRRVGMLAVLLKVVRTESLLGLWKGMSPSIVRCVPGVGIYF--GTLYSLKQYFLR-
.. . : : : . .... ::.:::.::.. : .:. : . ..... ::
NP_001 VEKPQYR-GTLHCFKSIIKQESVLGLYKGLGS------PLMGLTFINALVFGVQGNTLRA
40 50 60 70 80
120 130 140 150 160 170
pF1KE6 -GHPPTALESVMLGVGSRSVAGVCMSPITVIKTRYESGKYG----YESIYAALRSIYHSE
:: . :.. . :... .. : :. . ::: . : :.. : .:: :
NP_001 LGHD-SPLNQFLAGAAAGAIQCVICCPMELAKTRLQLQDAGPARTYKGSLDCLAQIYGHE
90 100 110 120 130 140
180 190 200 210 220 230
pF1KE6 GHRGLFSGLTATLLRDAPFSGIYLMFYNQTKNIVPHDQVDATLIPITNFSCGIFAGILAS
: ::. :...::::..: :.:.. :. . . : :.: .. : .::..
NP_001 GLRGVNRGMVSTLLRETPSFGVYFLTYDALTRALGCEPGDRLLVPKLLLAGGT-SGIVSW
150 160 170 180 190 200
240 250 260 270 280
pF1KE6 LVTQPADVIKTHMQLYPLK----FQWIGQAVTLIFKDYGLRGFFQGGIPRALRRTLMAAM
: : :.::.:...: :. .. : . : .. : : : .: ::
NP_001 LSTYPVDVVKSRLQADGLRGAPRYRGILDCVHQSYRAEGWRVFTRGLASTLLRAFPVNAA
210 220 230 240 250 260
290 300
pF1KE6 AWTVYEEMMAKMGLKS
NP_001 TFATVTVVLTYARGEEAGPEGEAVPAAPAGPALAQPSSL
270 280 290 300
304 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 14:44:01 2016 done: Tue Nov 8 14:44:02 2016
Total Scan time: 6.150 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]