Result of FASTA (omim) for
pFN21AE6604
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE6604, 243 aa
1>>>pF1KE6604 243 - 243 aa - 243 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.7347+/-0.000334; mu= 13.2470+/- 0.021
mean_var=93.6544+/-18.268, 0's: 0 Z-trim(117.5): 82 B-trim: 47 in 1/50
Lambda= 0.132529
statistics sampled from 29410 (29495) to 29410 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.721), E-opt: 0.2 (0.346), width: 16
Scan time: 5.060
The best scores are: opt bits E(85289)
NP_001135880 (OMIM: 187430) cysteine-rich secretor ( 243) 1722 338.9 4.8e-93
NP_001135907 (OMIM: 187430) cysteine-rich secretor ( 243) 1722 338.9 4.8e-93
NP_001135889 (OMIM: 187430) cysteine-rich secretor ( 243) 1722 338.9 4.8e-93
NP_001135879 (OMIM: 187430) cysteine-rich secretor ( 243) 1722 338.9 4.8e-93
NP_001248751 (OMIM: 187430) cysteine-rich secretor ( 243) 1722 338.9 4.8e-93
NP_003287 (OMIM: 187430) cysteine-rich secretory p ( 243) 1722 338.9 4.8e-93
XP_005249408 (OMIM: 187430) PREDICTED: cysteine-ri ( 278) 1195 238.2 1.1e-62
XP_011513143 (OMIM: 187430) PREDICTED: cysteine-ri ( 278) 1195 238.2 1.1e-62
XP_005249406 (OMIM: 187430) PREDICTED: cysteine-ri ( 278) 1195 238.2 1.1e-62
XP_005249409 (OMIM: 187430) PREDICTED: cysteine-ri ( 278) 1195 238.2 1.1e-62
XP_005249410 (OMIM: 187430) PREDICTED: cysteine-ri ( 278) 1195 238.2 1.1e-62
XP_005249407 (OMIM: 187430) PREDICTED: cysteine-ri ( 278) 1195 238.2 1.1e-62
XP_005249413 (OMIM: 187430) PREDICTED: cysteine-ri ( 278) 1195 238.2 1.1e-62
XP_011513144 (OMIM: 187430) PREDICTED: cysteine-ri ( 278) 1195 238.2 1.1e-62
XP_011513145 (OMIM: 187430) PREDICTED: cysteine-ri ( 252) 1190 237.2 2.1e-62
XP_011513146 (OMIM: 187430) PREDICTED: cysteine-ri ( 145) 933 187.9 8.4e-48
NP_001192149 (OMIM: 601193) cysteine-rich secretor ( 249) 759 154.8 1.3e-37
NP_001122 (OMIM: 601193) cysteine-rich secretory p ( 249) 759 154.8 1.3e-37
NP_733758 (OMIM: 601193) cysteine-rich secretory p ( 178) 506 106.3 3.7e-23
XP_016865810 (OMIM: 601193) PREDICTED: cysteine-ri ( 147) 502 105.5 5.4e-23
XP_016865809 (OMIM: 601193) PREDICTED: cysteine-ri ( 147) 502 105.5 5.4e-23
XP_011512617 (OMIM: 601193) PREDICTED: cysteine-ri ( 147) 502 105.5 5.4e-23
NP_006842 (OMIM: 602692) glioma pathogenesis-relat ( 266) 415 89.0 8.7e-18
NP_689992 (OMIM: 610395) GLIPR1-like protein 1 iso ( 233) 395 85.2 1.1e-16
NP_001291893 (OMIM: 610395) GLIPR1-like protein 1 ( 242) 389 84.0 2.5e-16
XP_011536436 (OMIM: 610395) PREDICTED: GLIPR1-like ( 301) 389 84.1 3e-16
NP_001257325 (OMIM: 610394) GLIPR1-like protein 2 ( 344) 300 67.1 4.4e-11
NP_689649 (OMIM: 610394) GLIPR1-like protein 2 iso ( 253) 291 65.3 1.1e-10
XP_016878745 (OMIM: 616572) PREDICTED: C-type lect ( 324) 292 65.6 1.2e-10
XP_016878698 (OMIM: 616571) PREDICTED: C-type lect ( 324) 291 65.4 1.4e-10
XP_005256033 (OMIM: 616572) PREDICTED: C-type lect ( 446) 292 65.7 1.5e-10
XP_016878744 (OMIM: 616572) PREDICTED: C-type lect ( 446) 292 65.7 1.5e-10
NP_001011880 (OMIM: 616572) C-type lectin domain f ( 455) 292 65.7 1.6e-10
XP_005255991 (OMIM: 616571) PREDICTED: C-type lect ( 446) 291 65.5 1.8e-10
NP_001129686 (OMIM: 616571) C-type lectin domain f ( 446) 291 65.5 1.8e-10
NP_872425 (OMIM: 616571) C-type lectin domain fami ( 446) 291 65.5 1.8e-10
NP_001258126 (OMIM: 616571) C-type lectin domain f ( 446) 291 65.5 1.8e-10
XP_016878695 (OMIM: 616571) PREDICTED: C-type lect ( 476) 291 65.5 1.9e-10
NP_775890 (OMIM: 616573) C-type lectin domain fami ( 446) 290 65.3 2e-10
XP_011521339 (OMIM: 616573) PREDICTED: C-type lect ( 329) 270 61.4 2.3e-09
XP_011521337 (OMIM: 616573) PREDICTED: C-type lect ( 396) 270 61.5 2.6e-09
XP_006721242 (OMIM: 616573) PREDICTED: C-type lect ( 451) 270 61.5 2.9e-09
XP_011521336 (OMIM: 616573) PREDICTED: C-type lect ( 451) 270 61.5 2.9e-09
NP_113664 (OMIM: 612434) cysteine-rich secretory p ( 497) 267 61.0 4.6e-09
XP_005256247 (OMIM: 612434) PREDICTED: cysteine-ri ( 497) 267 61.0 4.6e-09
NP_056970 (OMIM: 607076) peptidase inhibitor 15 pr ( 258) 250 57.5 2.7e-08
NP_001311332 (OMIM: 607076) peptidase inhibitor 15 ( 258) 250 57.5 2.7e-08
XP_016874337 (OMIM: 610394) PREDICTED: GLIPR1-like ( 267) 238 55.2 1.3e-07
XP_011536077 (OMIM: 602692) PREDICTED: glioma path ( 266) 226 52.9 6.6e-07
NP_071738 (OMIM: 607141) Golgi-associated plant pa ( 154) 213 50.2 2.4e-06
>>NP_001135880 (OMIM: 187430) cysteine-rich secretory pr (243 aa)
initn: 1722 init1: 1722 opt: 1722 Z-score: 1791.4 bits: 338.9 E(85289): 4.8e-93
Smith-Waterman score: 1722; 100.0% identity (100.0% similar) in 243 aa overlap (1-243:1-243)
10 20 30 40 50 60
pF1KE6 MALLPVLFLVTVLLPSLPAEGKDPAFTALLTTQLQVQREIVNKHNELRKAVSPPASNMLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MALLPVLFLVTVLLPSLPAEGKDPAFTALLTTQLQVQREIVNKHNELRKAVSPPASNMLK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 MEWSREVTTNAQRWANKCTLQHSDPEDRKTSTRCGENLYMSSDPTSWSSAIQSWYDEILD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MEWSREVTTNAQRWANKCTLQHSDPEDRKTSTRCGENLYMSSDPTSWSSAIQSWYDEILD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 FVYGVGPKSPNAVVGHYTQLVWYSTYQVGCGIAYCPNQDSLKYYYVCQYCPAGNNMNRKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FVYGVGPKSPNAVVGHYTQLVWYSTYQVGCGIAYCPNQDSLKYYYVCQYCPAGNNMNRKN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 TPYQQGTPCAGCPDDCDKGLCTNSCQYQDLLSNCDSLKNTAGCEHELLKEKCKATCLCEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TPYQQGTPCAGCPDDCDKGLCTNSCQYQDLLSNCDSLKNTAGCEHELLKEKCKATCLCEN
190 200 210 220 230 240
pF1KE6 KIY
:::
NP_001 KIY
>>NP_001135907 (OMIM: 187430) cysteine-rich secretory pr (243 aa)
initn: 1722 init1: 1722 opt: 1722 Z-score: 1791.4 bits: 338.9 E(85289): 4.8e-93
Smith-Waterman score: 1722; 100.0% identity (100.0% similar) in 243 aa overlap (1-243:1-243)
10 20 30 40 50 60
pF1KE6 MALLPVLFLVTVLLPSLPAEGKDPAFTALLTTQLQVQREIVNKHNELRKAVSPPASNMLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MALLPVLFLVTVLLPSLPAEGKDPAFTALLTTQLQVQREIVNKHNELRKAVSPPASNMLK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 MEWSREVTTNAQRWANKCTLQHSDPEDRKTSTRCGENLYMSSDPTSWSSAIQSWYDEILD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MEWSREVTTNAQRWANKCTLQHSDPEDRKTSTRCGENLYMSSDPTSWSSAIQSWYDEILD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 FVYGVGPKSPNAVVGHYTQLVWYSTYQVGCGIAYCPNQDSLKYYYVCQYCPAGNNMNRKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FVYGVGPKSPNAVVGHYTQLVWYSTYQVGCGIAYCPNQDSLKYYYVCQYCPAGNNMNRKN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 TPYQQGTPCAGCPDDCDKGLCTNSCQYQDLLSNCDSLKNTAGCEHELLKEKCKATCLCEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TPYQQGTPCAGCPDDCDKGLCTNSCQYQDLLSNCDSLKNTAGCEHELLKEKCKATCLCEN
190 200 210 220 230 240
pF1KE6 KIY
:::
NP_001 KIY
>>NP_001135889 (OMIM: 187430) cysteine-rich secretory pr (243 aa)
initn: 1722 init1: 1722 opt: 1722 Z-score: 1791.4 bits: 338.9 E(85289): 4.8e-93
Smith-Waterman score: 1722; 100.0% identity (100.0% similar) in 243 aa overlap (1-243:1-243)
10 20 30 40 50 60
pF1KE6 MALLPVLFLVTVLLPSLPAEGKDPAFTALLTTQLQVQREIVNKHNELRKAVSPPASNMLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MALLPVLFLVTVLLPSLPAEGKDPAFTALLTTQLQVQREIVNKHNELRKAVSPPASNMLK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 MEWSREVTTNAQRWANKCTLQHSDPEDRKTSTRCGENLYMSSDPTSWSSAIQSWYDEILD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MEWSREVTTNAQRWANKCTLQHSDPEDRKTSTRCGENLYMSSDPTSWSSAIQSWYDEILD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 FVYGVGPKSPNAVVGHYTQLVWYSTYQVGCGIAYCPNQDSLKYYYVCQYCPAGNNMNRKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FVYGVGPKSPNAVVGHYTQLVWYSTYQVGCGIAYCPNQDSLKYYYVCQYCPAGNNMNRKN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 TPYQQGTPCAGCPDDCDKGLCTNSCQYQDLLSNCDSLKNTAGCEHELLKEKCKATCLCEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TPYQQGTPCAGCPDDCDKGLCTNSCQYQDLLSNCDSLKNTAGCEHELLKEKCKATCLCEN
190 200 210 220 230 240
pF1KE6 KIY
:::
NP_001 KIY
>>NP_001135879 (OMIM: 187430) cysteine-rich secretory pr (243 aa)
initn: 1722 init1: 1722 opt: 1722 Z-score: 1791.4 bits: 338.9 E(85289): 4.8e-93
Smith-Waterman score: 1722; 100.0% identity (100.0% similar) in 243 aa overlap (1-243:1-243)
10 20 30 40 50 60
pF1KE6 MALLPVLFLVTVLLPSLPAEGKDPAFTALLTTQLQVQREIVNKHNELRKAVSPPASNMLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MALLPVLFLVTVLLPSLPAEGKDPAFTALLTTQLQVQREIVNKHNELRKAVSPPASNMLK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 MEWSREVTTNAQRWANKCTLQHSDPEDRKTSTRCGENLYMSSDPTSWSSAIQSWYDEILD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MEWSREVTTNAQRWANKCTLQHSDPEDRKTSTRCGENLYMSSDPTSWSSAIQSWYDEILD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 FVYGVGPKSPNAVVGHYTQLVWYSTYQVGCGIAYCPNQDSLKYYYVCQYCPAGNNMNRKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FVYGVGPKSPNAVVGHYTQLVWYSTYQVGCGIAYCPNQDSLKYYYVCQYCPAGNNMNRKN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 TPYQQGTPCAGCPDDCDKGLCTNSCQYQDLLSNCDSLKNTAGCEHELLKEKCKATCLCEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TPYQQGTPCAGCPDDCDKGLCTNSCQYQDLLSNCDSLKNTAGCEHELLKEKCKATCLCEN
190 200 210 220 230 240
pF1KE6 KIY
:::
NP_001 KIY
>>NP_001248751 (OMIM: 187430) cysteine-rich secretory pr (243 aa)
initn: 1722 init1: 1722 opt: 1722 Z-score: 1791.4 bits: 338.9 E(85289): 4.8e-93
Smith-Waterman score: 1722; 100.0% identity (100.0% similar) in 243 aa overlap (1-243:1-243)
10 20 30 40 50 60
pF1KE6 MALLPVLFLVTVLLPSLPAEGKDPAFTALLTTQLQVQREIVNKHNELRKAVSPPASNMLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MALLPVLFLVTVLLPSLPAEGKDPAFTALLTTQLQVQREIVNKHNELRKAVSPPASNMLK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 MEWSREVTTNAQRWANKCTLQHSDPEDRKTSTRCGENLYMSSDPTSWSSAIQSWYDEILD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MEWSREVTTNAQRWANKCTLQHSDPEDRKTSTRCGENLYMSSDPTSWSSAIQSWYDEILD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 FVYGVGPKSPNAVVGHYTQLVWYSTYQVGCGIAYCPNQDSLKYYYVCQYCPAGNNMNRKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FVYGVGPKSPNAVVGHYTQLVWYSTYQVGCGIAYCPNQDSLKYYYVCQYCPAGNNMNRKN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 TPYQQGTPCAGCPDDCDKGLCTNSCQYQDLLSNCDSLKNTAGCEHELLKEKCKATCLCEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TPYQQGTPCAGCPDDCDKGLCTNSCQYQDLLSNCDSLKNTAGCEHELLKEKCKATCLCEN
190 200 210 220 230 240
pF1KE6 KIY
:::
NP_001 KIY
>>NP_003287 (OMIM: 187430) cysteine-rich secretory prote (243 aa)
initn: 1722 init1: 1722 opt: 1722 Z-score: 1791.4 bits: 338.9 E(85289): 4.8e-93
Smith-Waterman score: 1722; 100.0% identity (100.0% similar) in 243 aa overlap (1-243:1-243)
10 20 30 40 50 60
pF1KE6 MALLPVLFLVTVLLPSLPAEGKDPAFTALLTTQLQVQREIVNKHNELRKAVSPPASNMLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 MALLPVLFLVTVLLPSLPAEGKDPAFTALLTTQLQVQREIVNKHNELRKAVSPPASNMLK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 MEWSREVTTNAQRWANKCTLQHSDPEDRKTSTRCGENLYMSSDPTSWSSAIQSWYDEILD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 MEWSREVTTNAQRWANKCTLQHSDPEDRKTSTRCGENLYMSSDPTSWSSAIQSWYDEILD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 FVYGVGPKSPNAVVGHYTQLVWYSTYQVGCGIAYCPNQDSLKYYYVCQYCPAGNNMNRKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 FVYGVGPKSPNAVVGHYTQLVWYSTYQVGCGIAYCPNQDSLKYYYVCQYCPAGNNMNRKN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 TPYQQGTPCAGCPDDCDKGLCTNSCQYQDLLSNCDSLKNTAGCEHELLKEKCKATCLCEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 TPYQQGTPCAGCPDDCDKGLCTNSCQYQDLLSNCDSLKNTAGCEHELLKEKCKATCLCEN
190 200 210 220 230 240
pF1KE6 KIY
:::
NP_003 KIY
>>XP_005249408 (OMIM: 187430) PREDICTED: cysteine-rich s (278 aa)
initn: 1189 init1: 1189 opt: 1195 Z-score: 1246.1 bits: 238.2 E(85289): 1.1e-62
Smith-Waterman score: 1623; 87.3% identity (87.3% similar) in 275 aa overlap (1-240:1-275)
10 20 30 40 50 60
pF1KE6 MALLPVLFLVTVLLPSLPAEGKDPAFTALLTTQLQVQREIVNKHNELRKAVSPPASNMLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MALLPVLFLVTVLLPSLPAEGKDPAFTALLTTQLQVQREIVNKHNELRKAVSPPASNMLK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 MEWSREVTTNAQRWANKCTLQHSDPEDRKTSTRCGENLYMSSDPTSWSSAIQSWYDEILD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MEWSREVTTNAQRWANKCTLQHSDPEDRKTSTRCGENLYMSSDPTSWSSAIQSWYDEILD
70 80 90 100 110 120
130 140 150 160 170
pF1KE6 FVYGVGPKSPNAVVGHYTQLVWYSTYQVGCGIAYCPNQDSLKYYYVCQYCPA--------
::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 FVYGVGPKSPNAVVGHYTQLVWYSTYQVGCGIAYCPNQDSLKYYYVCQYCPAMKTYLNKR
130 140 150 160 170 180
180 190 200
pF1KE6 ---------------------------GNNMNRKNTPYQQGTPCAGCPDDCDKGLCTNSC
:::::::::::::::::::::::::::::::::
XP_005 EGINVWKCFLRLRHFQLLRGEQLLTFSGNNMNRKNTPYQQGTPCAGCPDDCDKGLCTNSC
190 200 210 220 230 240
210 220 230 240
pF1KE6 QYQDLLSNCDSLKNTAGCEHELLKEKCKATCLCENKIY
:::::::::::::::::::::::::::::::::::
XP_005 QYQDLLSNCDSLKNTAGCEHELLKEKCKATCLCENKIY
250 260 270
>>XP_011513143 (OMIM: 187430) PREDICTED: cysteine-rich s (278 aa)
initn: 1189 init1: 1189 opt: 1195 Z-score: 1246.1 bits: 238.2 E(85289): 1.1e-62
Smith-Waterman score: 1623; 87.3% identity (87.3% similar) in 275 aa overlap (1-240:1-275)
10 20 30 40 50 60
pF1KE6 MALLPVLFLVTVLLPSLPAEGKDPAFTALLTTQLQVQREIVNKHNELRKAVSPPASNMLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MALLPVLFLVTVLLPSLPAEGKDPAFTALLTTQLQVQREIVNKHNELRKAVSPPASNMLK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 MEWSREVTTNAQRWANKCTLQHSDPEDRKTSTRCGENLYMSSDPTSWSSAIQSWYDEILD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MEWSREVTTNAQRWANKCTLQHSDPEDRKTSTRCGENLYMSSDPTSWSSAIQSWYDEILD
70 80 90 100 110 120
130 140 150 160 170
pF1KE6 FVYGVGPKSPNAVVGHYTQLVWYSTYQVGCGIAYCPNQDSLKYYYVCQYCPA--------
::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FVYGVGPKSPNAVVGHYTQLVWYSTYQVGCGIAYCPNQDSLKYYYVCQYCPAMKTYLNKR
130 140 150 160 170 180
180 190 200
pF1KE6 ---------------------------GNNMNRKNTPYQQGTPCAGCPDDCDKGLCTNSC
:::::::::::::::::::::::::::::::::
XP_011 EGINVWKCFLRLRHFQLLRGEQLLTFSGNNMNRKNTPYQQGTPCAGCPDDCDKGLCTNSC
190 200 210 220 230 240
210 220 230 240
pF1KE6 QYQDLLSNCDSLKNTAGCEHELLKEKCKATCLCENKIY
:::::::::::::::::::::::::::::::::::
XP_011 QYQDLLSNCDSLKNTAGCEHELLKEKCKATCLCENKIY
250 260 270
>>XP_005249406 (OMIM: 187430) PREDICTED: cysteine-rich s (278 aa)
initn: 1189 init1: 1189 opt: 1195 Z-score: 1246.1 bits: 238.2 E(85289): 1.1e-62
Smith-Waterman score: 1623; 87.3% identity (87.3% similar) in 275 aa overlap (1-240:1-275)
10 20 30 40 50 60
pF1KE6 MALLPVLFLVTVLLPSLPAEGKDPAFTALLTTQLQVQREIVNKHNELRKAVSPPASNMLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MALLPVLFLVTVLLPSLPAEGKDPAFTALLTTQLQVQREIVNKHNELRKAVSPPASNMLK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 MEWSREVTTNAQRWANKCTLQHSDPEDRKTSTRCGENLYMSSDPTSWSSAIQSWYDEILD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MEWSREVTTNAQRWANKCTLQHSDPEDRKTSTRCGENLYMSSDPTSWSSAIQSWYDEILD
70 80 90 100 110 120
130 140 150 160 170
pF1KE6 FVYGVGPKSPNAVVGHYTQLVWYSTYQVGCGIAYCPNQDSLKYYYVCQYCPA--------
::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 FVYGVGPKSPNAVVGHYTQLVWYSTYQVGCGIAYCPNQDSLKYYYVCQYCPAMKTYLNKR
130 140 150 160 170 180
180 190 200
pF1KE6 ---------------------------GNNMNRKNTPYQQGTPCAGCPDDCDKGLCTNSC
:::::::::::::::::::::::::::::::::
XP_005 EGINVWKCFLRLRHFQLLRGEQLLTFSGNNMNRKNTPYQQGTPCAGCPDDCDKGLCTNSC
190 200 210 220 230 240
210 220 230 240
pF1KE6 QYQDLLSNCDSLKNTAGCEHELLKEKCKATCLCENKIY
:::::::::::::::::::::::::::::::::::
XP_005 QYQDLLSNCDSLKNTAGCEHELLKEKCKATCLCENKIY
250 260 270
>>XP_005249409 (OMIM: 187430) PREDICTED: cysteine-rich s (278 aa)
initn: 1189 init1: 1189 opt: 1195 Z-score: 1246.1 bits: 238.2 E(85289): 1.1e-62
Smith-Waterman score: 1623; 87.3% identity (87.3% similar) in 275 aa overlap (1-240:1-275)
10 20 30 40 50 60
pF1KE6 MALLPVLFLVTVLLPSLPAEGKDPAFTALLTTQLQVQREIVNKHNELRKAVSPPASNMLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MALLPVLFLVTVLLPSLPAEGKDPAFTALLTTQLQVQREIVNKHNELRKAVSPPASNMLK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 MEWSREVTTNAQRWANKCTLQHSDPEDRKTSTRCGENLYMSSDPTSWSSAIQSWYDEILD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MEWSREVTTNAQRWANKCTLQHSDPEDRKTSTRCGENLYMSSDPTSWSSAIQSWYDEILD
70 80 90 100 110 120
130 140 150 160 170
pF1KE6 FVYGVGPKSPNAVVGHYTQLVWYSTYQVGCGIAYCPNQDSLKYYYVCQYCPA--------
::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 FVYGVGPKSPNAVVGHYTQLVWYSTYQVGCGIAYCPNQDSLKYYYVCQYCPAMKTYLNKR
130 140 150 160 170 180
180 190 200
pF1KE6 ---------------------------GNNMNRKNTPYQQGTPCAGCPDDCDKGLCTNSC
:::::::::::::::::::::::::::::::::
XP_005 EGINVWKCFLRLRHFQLLRGEQLLTFSGNNMNRKNTPYQQGTPCAGCPDDCDKGLCTNSC
190 200 210 220 230 240
210 220 230 240
pF1KE6 QYQDLLSNCDSLKNTAGCEHELLKEKCKATCLCENKIY
:::::::::::::::::::::::::::::::::::
XP_005 QYQDLLSNCDSLKNTAGCEHELLKEKCKATCLCENKIY
250 260 270
243 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 14:41:47 2016 done: Tue Nov 8 14:41:47 2016
Total Scan time: 5.060 Total Display time: -0.020
Function used was FASTA [36.3.4 Apr, 2011]