Result of FASTA (omim) for
pFN21AE6570
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE6570, 117 aa
1>>>pF1KE6570 117 - 117 aa - 117 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.0878+/-0.000261; mu= 7.9086+/- 0.016
mean_var=90.2846+/-17.960, 0's: 0 Z-trim(122.5): 16 B-trim: 1619 in 2/54
Lambda= 0.134979
statistics sampled from 40829 (40845) to 40829 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.831), E-opt: 0.2 (0.479), width: 16
Scan time: 3.970
The best scores are: opt bits E(85289)
NP_996927 (OMIM: 603061) alpha-endosulfine isoform ( 117) 763 157.0 6.3e-39
NP_004427 (OMIM: 603061) alpha-endosulfine isoform ( 121) 763 157.0 6.4e-39
NP_996930 (OMIM: 603061) alpha-endosulfine isoform ( 113) 643 133.7 6.6e-32
NP_996929 (OMIM: 603061) alpha-endosulfine isoform ( 117) 643 133.7 6.8e-32
NP_006619 (OMIM: 605487) cAMP-regulated phosphopro ( 112) 554 116.3 1.1e-26
XP_016877357 (OMIM: 605487) PREDICTED: cAMP-regula ( 112) 554 116.3 1.1e-26
NP_001293124 (OMIM: 605487) cAMP-regulated phospho ( 112) 554 116.3 1.1e-26
XP_016877358 (OMIM: 605487) PREDICTED: cAMP-regula ( 112) 537 113.0 1.1e-25
NP_001317238 (OMIM: 605487) cAMP-regulated phospho ( 96) 536 112.8 1.1e-25
XP_016877359 (OMIM: 605487) PREDICTED: cAMP-regula ( 96) 536 112.8 1.1e-25
NP_001293120 (OMIM: 605487) cAMP-regulated phospho ( 131) 537 113.1 1.2e-25
NP_001293125 (OMIM: 605487) cAMP-regulated phospho ( 131) 537 113.1 1.2e-25
NP_997051 (OMIM: 603061) alpha-endosulfine isoform ( 105) 389 84.2 4.8e-17
NP_996926 (OMIM: 603061) alpha-endosulfine isoform ( 133) 389 84.2 5.8e-17
NP_996925 (OMIM: 603061) alpha-endosulfine isoform ( 137) 389 84.2 6e-17
NP_996928 (OMIM: 603061) alpha-endosulfine isoform ( 133) 374 81.3 4.4e-16
>>NP_996927 (OMIM: 603061) alpha-endosulfine isoform 4 [ (117 aa)
initn: 763 init1: 763 opt: 763 Z-score: 819.9 bits: 157.0 E(85289): 6.3e-39
Smith-Waterman score: 763; 99.1% identity (99.1% similar) in 117 aa overlap (1-117:1-117)
10 20 30 40 50 60
pF1KE6 MSQKQEEENPAEETGEEKQDTLEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLMKRLQK
::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::
NP_996 MSQKQEEENPAEETGEEKQDTQEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLMKRLQK
10 20 30 40 50 60
70 80 90 100 110
pF1KE6 GQKYFDSGDYNMAKAKMKNKQLPSAGPDKNLVTGDHIPTPQDLPQRKSSLVTSKLAG
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_996 GQKYFDSGDYNMAKAKMKNKQLPSAGPDKNLVTGDHIPTPQDLPQRKSSLVTSKLAG
70 80 90 100 110
>>NP_004427 (OMIM: 603061) alpha-endosulfine isoform 3 [ (121 aa)
initn: 763 init1: 763 opt: 763 Z-score: 819.7 bits: 157.0 E(85289): 6.4e-39
Smith-Waterman score: 763; 99.1% identity (99.1% similar) in 117 aa overlap (1-117:1-117)
10 20 30 40 50 60
pF1KE6 MSQKQEEENPAEETGEEKQDTLEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLMKRLQK
::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::
NP_004 MSQKQEEENPAEETGEEKQDTQEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLMKRLQK
10 20 30 40 50 60
70 80 90 100 110
pF1KE6 GQKYFDSGDYNMAKAKMKNKQLPSAGPDKNLVTGDHIPTPQDLPQRKSSLVTSKLAG
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 GQKYFDSGDYNMAKAKMKNKQLPSAGPDKNLVTGDHIPTPQDLPQRKSSLVTSKLAGGQV
70 80 90 100 110 120
NP_004 E
>>NP_996930 (OMIM: 603061) alpha-endosulfine isoform 7 [ (113 aa)
initn: 643 init1: 643 opt: 643 Z-score: 693.8 bits: 133.7 E(85289): 6.6e-32
Smith-Waterman score: 643; 98.0% identity (99.0% similar) in 99 aa overlap (19-117:15-113)
10 20 30 40 50 60
pF1KE6 MSQKQEEENPAEETGEEKQDTLEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLMKRLQK
.:: ::::::::::::::::::::::::::::::::::::::
NP_996 MAGGLGCDVCYWFVEDTQEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLMKRLQK
10 20 30 40 50
70 80 90 100 110
pF1KE6 GQKYFDSGDYNMAKAKMKNKQLPSAGPDKNLVTGDHIPTPQDLPQRKSSLVTSKLAG
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_996 GQKYFDSGDYNMAKAKMKNKQLPSAGPDKNLVTGDHIPTPQDLPQRKSSLVTSKLAG
60 70 80 90 100 110
>>NP_996929 (OMIM: 603061) alpha-endosulfine isoform 6 [ (117 aa)
initn: 643 init1: 643 opt: 643 Z-score: 693.6 bits: 133.7 E(85289): 6.8e-32
Smith-Waterman score: 643; 98.0% identity (99.0% similar) in 99 aa overlap (19-117:15-113)
10 20 30 40 50 60
pF1KE6 MSQKQEEENPAEETGEEKQDTLEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLMKRLQK
.:: ::::::::::::::::::::::::::::::::::::::
NP_996 MAGGLGCDVCYWFVEDTQEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLMKRLQK
10 20 30 40 50
70 80 90 100 110
pF1KE6 GQKYFDSGDYNMAKAKMKNKQLPSAGPDKNLVTGDHIPTPQDLPQRKSSLVTSKLAG
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_996 GQKYFDSGDYNMAKAKMKNKQLPSAGPDKNLVTGDHIPTPQDLPQRKSSLVTSKLAGGQV
60 70 80 90 100 110
NP_996 E
>>NP_006619 (OMIM: 605487) cAMP-regulated phosphoprotein (112 aa)
initn: 552 init1: 535 opt: 554 Z-score: 600.2 bits: 116.3 E(85289): 1.1e-26
Smith-Waterman score: 554; 76.4% identity (88.2% similar) in 110 aa overlap (8-117:4-112)
10 20 30 40 50 60
pF1KE6 MSQKQEEENPAEETGEEKQDTLEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLMKRLQK
: : ..::... .: . ::.::::::::.:: ::::::::::: :::::
NP_006 MSAEVPEAASAEEQKE-MEDKVTSPEKAEEAKLKARYPHLGQKPGGSDFLRKRLQK
10 20 30 40 50
70 80 90 100 110
pF1KE6 GQKYFDSGDYNMAKAKMKNKQLPSAGPDKNLVTGDHIPTPQDLPQRKSSLVTSKLAG
:::::::::::::::::::::::.:.:::. :::::::::::::::: :::.:::::
NP_006 GQKYFDSGDYNMAKAKMKNKQLPTAAPDKTEVTGDHIPTPQDLPQRKPSLVASKLAG
60 70 80 90 100 110
>>XP_016877357 (OMIM: 605487) PREDICTED: cAMP-regulated (112 aa)
initn: 552 init1: 535 opt: 554 Z-score: 600.2 bits: 116.3 E(85289): 1.1e-26
Smith-Waterman score: 554; 76.4% identity (88.2% similar) in 110 aa overlap (8-117:4-112)
10 20 30 40 50 60
pF1KE6 MSQKQEEENPAEETGEEKQDTLEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLMKRLQK
: : ..::... .: . ::.::::::::.:: ::::::::::: :::::
XP_016 MSAEVPEAASAEEQKE-MEDKVTSPEKAEEAKLKARYPHLGQKPGGSDFLRKRLQK
10 20 30 40 50
70 80 90 100 110
pF1KE6 GQKYFDSGDYNMAKAKMKNKQLPSAGPDKNLVTGDHIPTPQDLPQRKSSLVTSKLAG
:::::::::::::::::::::::.:.:::. :::::::::::::::: :::.:::::
XP_016 GQKYFDSGDYNMAKAKMKNKQLPTAAPDKTEVTGDHIPTPQDLPQRKPSLVASKLAG
60 70 80 90 100 110
>>NP_001293124 (OMIM: 605487) cAMP-regulated phosphoprot (112 aa)
initn: 552 init1: 535 opt: 554 Z-score: 600.2 bits: 116.3 E(85289): 1.1e-26
Smith-Waterman score: 554; 76.4% identity (88.2% similar) in 110 aa overlap (8-117:4-112)
10 20 30 40 50 60
pF1KE6 MSQKQEEENPAEETGEEKQDTLEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLMKRLQK
: : ..::... .: . ::.::::::::.:: ::::::::::: :::::
NP_001 MSAEVPEAASAEEQKE-MEDKVTSPEKAEEAKLKARYPHLGQKPGGSDFLRKRLQK
10 20 30 40 50
70 80 90 100 110
pF1KE6 GQKYFDSGDYNMAKAKMKNKQLPSAGPDKNLVTGDHIPTPQDLPQRKSSLVTSKLAG
:::::::::::::::::::::::.:.:::. :::::::::::::::: :::.:::::
NP_001 GQKYFDSGDYNMAKAKMKNKQLPTAAPDKTEVTGDHIPTPQDLPQRKPSLVASKLAG
60 70 80 90 100 110
>>XP_016877358 (OMIM: 605487) PREDICTED: cAMP-regulated (112 aa)
initn: 535 init1: 535 opt: 537 Z-score: 582.3 bits: 113.0 E(85289): 1.1e-25
Smith-Waterman score: 537; 81.6% identity (90.8% similar) in 98 aa overlap (20-117:15-112)
10 20 30 40 50 60
pF1KE6 MSQKQEEENPAEETGEEKQDTLEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLMKRLQK
. .: . ::.::::::::.:: ::::::::::: :::::
XP_016 MLPWSLQPSIPNSLEEMEDKVTSPEKAEEAKLKARYPHLGQKPGGSDFLRKRLQK
10 20 30 40 50
70 80 90 100 110
pF1KE6 GQKYFDSGDYNMAKAKMKNKQLPSAGPDKNLVTGDHIPTPQDLPQRKSSLVTSKLAG
:::::::::::::::::::::::.:.:::. :::::::::::::::: :::.:::::
XP_016 GQKYFDSGDYNMAKAKMKNKQLPTAAPDKTEVTGDHIPTPQDLPQRKPSLVASKLAG
60 70 80 90 100 110
>>NP_001317238 (OMIM: 605487) cAMP-regulated phosphoprot (96 aa)
initn: 535 init1: 535 opt: 536 Z-score: 582.3 bits: 112.8 E(85289): 1.1e-25
Smith-Waterman score: 536; 83.3% identity (91.7% similar) in 96 aa overlap (22-117:1-96)
10 20 30 40 50 60
pF1KE6 MSQKQEEENPAEETGEEKQDTLEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLMKRLQK
.: . ::.::::::::.:: ::::::::::: :::::
NP_001 MEDKVTSPEKAEEAKLKARYPHLGQKPGGSDFLRKRLQK
10 20 30
70 80 90 100 110
pF1KE6 GQKYFDSGDYNMAKAKMKNKQLPSAGPDKNLVTGDHIPTPQDLPQRKSSLVTSKLAG
:::::::::::::::::::::::.:.:::. :::::::::::::::: :::.:::::
NP_001 GQKYFDSGDYNMAKAKMKNKQLPTAAPDKTEVTGDHIPTPQDLPQRKPSLVASKLAG
40 50 60 70 80 90
>>XP_016877359 (OMIM: 605487) PREDICTED: cAMP-regulated (96 aa)
initn: 535 init1: 535 opt: 536 Z-score: 582.3 bits: 112.8 E(85289): 1.1e-25
Smith-Waterman score: 536; 83.3% identity (91.7% similar) in 96 aa overlap (22-117:1-96)
10 20 30 40 50 60
pF1KE6 MSQKQEEENPAEETGEEKQDTLEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLMKRLQK
.: . ::.::::::::.:: ::::::::::: :::::
XP_016 MEDKVTSPEKAEEAKLKARYPHLGQKPGGSDFLRKRLQK
10 20 30
70 80 90 100 110
pF1KE6 GQKYFDSGDYNMAKAKMKNKQLPSAGPDKNLVTGDHIPTPQDLPQRKSSLVTSKLAG
:::::::::::::::::::::::.:.:::. :::::::::::::::: :::.:::::
XP_016 GQKYFDSGDYNMAKAKMKNKQLPTAAPDKTEVTGDHIPTPQDLPQRKPSLVASKLAG
40 50 60 70 80 90
117 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 14:29:41 2016 done: Tue Nov 8 14:29:42 2016
Total Scan time: 3.970 Total Display time: -0.030
Function used was FASTA [36.3.4 Apr, 2011]