FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE6529, 213 aa
  1>>>pF1KE6529 213 - 213 aa - 213 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 6.0206+/-0.000335; mu= 10.2994+/- 0.021
 mean_var=79.8543+/-15.981, 0's: 0 Z-trim(116.9): 12  B-trim: 265 in 1/50
 Lambda= 0.143524
 statistics sampled from 28372 (28383) to 28372 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.71), E-opt: 0.2 (0.333), width:  16
 Scan time:  4.620

The best scores are:                                      opt bits E(85289)
NP_009110 (OMIM: 606414) insulin-like peptide INSL ( 213) 1440 307.2 1.3e-83
XP_011516004 (OMIM: 606414) PREDICTED: insulin-lik ( 126)  840 182.9   2e-46
NP_005050 (OMIM: 179740) prorelaxin H2 isoform 2 p ( 117)  147 39.4  0.0029
NP_604390 (OMIM: 179740) prorelaxin H2 isoform 1 p ( 185)  147 39.5  0.0044


>>NP_009110 (OMIM: 606414) insulin-like peptide INSL6 pr  (213 aa)
 initn: 1440 init1: 1440 opt: 1440  Z-score: 1622.4  bits: 307.2 E(85289): 1.3e-83
Smith-Waterman score: 1440; 100.0% identity (100.0% similar) in 213 aa overlap (1-213:1-213)

               10        20        30        40        50        60
pF1KE6 MPRLLRLSLLWLGLLLVRFSRELSDISSARKLCGRYLVKEIEKLCGHANWSQFRFEEETP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_009 MPRLLRLSLLWLGLLLVRFSRELSDISSARKLCGRYLVKEIEKLCGHANWSQFRFEEETP
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE6 FSRLIAQASEKVEAYSPYQFESPQTASPARGRGTNPVSTSWEEAVNSWEMQSLPEYKDKK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_009 FSRLIAQASEKVEAYSPYQFESPQTASPARGRGTNPVSTSWEEAVNSWEMQSLPEYKDKK
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE6 GYSPLGKTREFSSSHNINVYIHENAKFQKKRRNKIKTLSNLFWGHHPQRKRRGYSEKCCL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_009 GYSPLGKTREFSSSHNINVYIHENAKFQKKRRNKIKTLSNLFWGHHPQRKRRGYSEKCCL
              130       140       150       160       170       180

              190       200       210   
pF1KE6 TGCTKEELSIACLPYIDFKRLKEKRSSLVTKIY
       :::::::::::::::::::::::::::::::::
NP_009 TGCTKEELSIACLPYIDFKRLKEKRSSLVTKIY
              190       200       210   

>>XP_011516004 (OMIM: 606414) PREDICTED: insulin-like pe  (126 aa)
 initn: 840 init1: 840 opt: 840  Z-score: 954.5  bits: 182.9 E(85289): 2e-46
Smith-Waterman score: 840; 100.0% identity (100.0% similar) in 125 aa overlap (1-125:1-125)

               10        20        30        40        50        60
pF1KE6 MPRLLRLSLLWLGLLLVRFSRELSDISSARKLCGRYLVKEIEKLCGHANWSQFRFEEETP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MPRLLRLSLLWLGLLLVRFSRELSDISSARKLCGRYLVKEIEKLCGHANWSQFRFEEETP
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE6 FSRLIAQASEKVEAYSPYQFESPQTASPARGRGTNPVSTSWEEAVNSWEMQSLPEYKDKK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FSRLIAQASEKVEAYSPYQFESPQTASPARGRGTNPVSTSWEEAVNSWEMQSLPEYKDKK
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE6 GYSPLGKTREFSSSHNINVYIHENAKFQKKRRNKIKTLSNLFWGHHPQRKRRGYSEKCCL
       :::::                                                       
XP_011 GYSPLV                                                      
                                                                   

>>NP_005050 (OMIM: 179740) prorelaxin H2 isoform 2 precu  (117 aa)
 initn: 188 init1:  90 opt: 147  Z-score: 179.5  bits: 39.4 E(85289): 0.0029
Smith-Waterman score: 147; 41.3% identity (68.3% similar) in 63 aa overlap (1-60:1-63)

               10        20          30        40        50        
pF1KE6 MPRLLRLSLLWLGLLLVRFSRELSD--ISSARKLCGRYLVKEIEKLCGHANWSQFRF-EE
       ::::. . :: . ::: .::: ..:  .  . ::::: ::.    .:: ..::.  . .:
NP_005 MPRLFFFHLLGVCLLLNQFSRAVADSWMEEVIKLCGRELVRAQIAICGMSTWSKRSLSQE
               10        20        30        40        50        60

        60        70        80        90       100       110       
pF1KE6 ETPFSRLIAQASEKVEAYSPYQFESPQTASPARGRGTNPVSTSWEEAVNSWEMQSLPEYK
       ..:                                                         
NP_005 DAPQTPRPVAGDFIQTVSLGISPDGGKALRTGSCFTREFLGALSKLCHPSSTKIQKP   
               70        80        90       100       110          

>>NP_604390 (OMIM: 179740) prorelaxin H2 isoform 1 prepr  (185 aa)
 initn: 266 init1:  90 opt: 147  Z-score: 176.4  bits: 39.5 E(85289): 0.0044
Smith-Waterman score: 190; 29.4% identity (55.4% similar) in 204 aa overlap (1-192:1-185)

               10        20          30        40        50        
pF1KE6 MPRLLRLSLLWLGLLLVRFSRELSD--ISSARKLCGRYLVKEIEKLCGHANWSQFRF-EE
       ::::. . :: . ::: .::: ..:  .  . ::::: ::.    .:: ..::.  . .:
NP_604 MPRLFFFHLLGVCLLLNQFSRAVADSWMEEVIKLCGRELVRAQIAICGMSTWSKRSLSQE
               10        20        30        40        50        60

        60        70        80        90       100       110       
pF1KE6 ETPFSRLIAQASEKVEAYSPYQFESPQTASPARGRGTNPVSTSWEEAVNSWEMQ-SLPEY
       ..:      :. . :    : .: . .: .     .   ..   :  ..  ::: .::. 
NP_604 DAP------QTPRPVAEIVP-SFINKDTET-INMMSEFVANLPQELKLTLSEMQPALPQL
                     70         80         90       100       110  

        120       130       140       150            160       170 
pF1KE6 KDKKGYSPLGKTREFSSSHNINVYIHENAKFQKKRRNKI-----KTLSNLFWGHHPQRKR
       ..   . :. :    .::    . ..:  :. ..:...      . :. :    : ..::
NP_604 QQ---HVPVLK----DSS----LLFEEFKKLIRNRQSEAADSSPSELKYLGLDTHSRKKR
               120               130       140       150       160 

                180       190       200       210   
pF1KE6 RGYS---EKCCLTGCTKEELSIACLPYIDFKRLKEKRSSLVTKIY
       . ::   .::: .::::. :.  :                     
NP_604 QLYSALANKCCHVGCTKRSLARFC                     
             170       180                          




213 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Tue Nov  8 14:08:25 2016 done: Tue Nov  8 14:08:25 2016
 Total Scan time:  4.620 Total Display time: -0.030

Function used was FASTA [36.3.4 Apr, 2011]