Result of FASTA (omim) for
pFN21AE6518
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE6518, 195 aa
1>>>pF1KE6518 195 - 195 aa - 195 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.4900+/-0.000274; mu= 5.7544+/- 0.017
mean_var=143.0789+/-28.338, 0's: 0 Z-trim(123.2): 60 B-trim: 0 in 0/57
Lambda= 0.107223
statistics sampled from 42584 (42646) to 42584 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.813), E-opt: 0.2 (0.5), width: 16
Scan time: 6.460
The best scores are: opt bits E(85289)
NP_000249 (OMIM: 160790,608751) myosin light chain ( 195) 1301 211.3 8e-55
XP_005257448 (OMIM: 160770) PREDICTED: myosin ligh ( 197) 1051 172.6 3.5e-43
NP_001002841 (OMIM: 160770) myosin light chain 4 [ ( 197) 1051 172.6 3.5e-43
NP_002467 (OMIM: 160770) myosin light chain 4 [Hom ( 197) 1051 172.6 3.5e-43
NP_524144 (OMIM: 160780) myosin light chain 1/3, s ( 194) 885 146.9 1.9e-35
XP_016880173 (OMIM: 160770) PREDICTED: myosin ligh ( 228) 825 137.7 1.3e-32
XP_011523141 (OMIM: 160770) PREDICTED: myosin ligh ( 228) 825 137.7 1.3e-32
XP_016880172 (OMIM: 160770) PREDICTED: myosin ligh ( 228) 825 137.7 1.3e-32
NP_001186558 (OMIM: 609930) myosin light chain 6B ( 208) 808 135.1 7.6e-32
NP_002466 (OMIM: 609930) myosin light chain 6B [Ho ( 208) 808 135.1 7.6e-32
NP_066299 (OMIM: 609931) myosin light polypeptide ( 151) 752 126.3 2.4e-29
NP_524146 (OMIM: 160780) myosin light chain 1/3, s ( 150) 735 123.7 1.5e-28
NP_524147 (OMIM: 609931) myosin light polypeptide ( 151) 723 121.8 5.4e-28
NP_005176 (OMIM: 114184) calmodulin-like protein 3 ( 149) 387 69.8 2.4e-12
NP_005175 (OMIM: 114183) calmodulin isoform 1 [Hom ( 149) 382 69.1 4e-12
NP_008819 (OMIM: 114180,614916,616247) calmodulin ( 149) 382 69.1 4e-12
NP_001316851 (OMIM: 114183) calmodulin isoform 1 [ ( 149) 382 69.1 4e-12
NP_001734 (OMIM: 114182,616249) calmodulin isoform ( 149) 382 69.1 4e-12
XP_006720321 (OMIM: 114180,614916,616247) PREDICTE ( 150) 382 69.1 4e-12
NP_001292553 (OMIM: 114182,616249) calmodulin isof ( 197) 382 69.1 5e-12
NP_001316850 (OMIM: 114183) calmodulin isoform 2 [ ( 113) 298 56.0 2.6e-08
NP_001316852 (OMIM: 114183) calmodulin isoform 2 [ ( 113) 298 56.0 2.6e-08
NP_001292555 (OMIM: 114182,616249) calmodulin isof ( 113) 298 56.0 2.6e-08
NP_001316855 (OMIM: 114183) calmodulin isoform 2 [ ( 113) 298 56.0 2.6e-08
NP_001292554 (OMIM: 114182,616249) calmodulin isof ( 113) 298 56.0 2.6e-08
NP_001316853 (OMIM: 114183) calmodulin isoform 2 [ ( 113) 298 56.0 2.6e-08
NP_001316854 (OMIM: 114183) calmodulin isoform 2 [ ( 113) 298 56.0 2.6e-08
NP_003271 (OMIM: 191040,611879,613243) troponin C, ( 161) 270 51.8 7e-07
NP_003270 (OMIM: 191039) troponin C, skeletal musc ( 160) 266 51.1 1.1e-06
XP_011527333 (OMIM: 191039) PREDICTED: troponin C, ( 145) 258 49.9 2.3e-06
NP_057450 (OMIM: 607314,614899) calcium-binding pr ( 220) 245 48.0 1.3e-05
NP_001305425 (OMIM: 607314,614899) calcium-binding ( 226) 245 48.0 1.3e-05
NP_619650 (OMIM: 610171) calmodulin-like protein 6 ( 181) 227 45.1 7.8e-05
XP_005244786 (OMIM: 610171) PREDICTED: calmodulin- ( 203) 227 45.2 8.5e-05
NP_001317242 (OMIM: 610171) calmodulin-like protei ( 164) 221 44.2 0.00014
NP_004356 (OMIM: 602907) centrin-3 isoform 2 [Homo ( 167) 221 44.2 0.00014
NP_004335 (OMIM: 300006) centrin-2 [Homo sapiens] ( 172) 218 43.7 0.0002
NP_004057 (OMIM: 603187) centrin-1 [Homo sapiens] ( 172) 214 43.1 0.0003
NP_001028849 (OMIM: 605563) calcium-binding protei ( 370) 216 43.6 0.00045
NP_062829 (OMIM: 607315) calcium-binding protein 5 ( 173) 209 42.3 0.00052
NP_004267 (OMIM: 605563) calcium-binding protein 1 ( 167) 207 42.0 0.00062
XP_016882481 (OMIM: 607315) PREDICTED: calcium-bin ( 284) 209 42.5 0.00077
NP_112482 (OMIM: 605563) calcium-binding protein 1 ( 227) 207 42.1 0.00079
XP_011543485 (OMIM: 608965,610427) PREDICTED: calc ( 170) 197 40.5 0.0018
NP_001287824 (OMIM: 608965,610427) calcium-binding ( 170) 197 40.5 0.0018
NP_001287825 (OMIM: 608965,610427) calcium-binding ( 170) 197 40.5 0.0018
XP_016873514 (OMIM: 608965,610427) PREDICTED: calc ( 170) 197 40.5 0.0018
NP_001284694 (OMIM: 602907) centrin-3 isoform 1 [H ( 191) 197 40.5 0.002
NP_660201 (OMIM: 608965,610427) calcium-binding pr ( 275) 197 40.6 0.0027
XP_011543483 (OMIM: 608965,610427) PREDICTED: calc ( 295) 197 40.6 0.0029
>>NP_000249 (OMIM: 160790,608751) myosin light chain 3 [ (195 aa)
initn: 1301 init1: 1301 opt: 1301 Z-score: 1105.2 bits: 211.3 E(85289): 8e-55
Smith-Waterman score: 1301; 99.5% identity (100.0% similar) in 195 aa overlap (1-195:1-195)
10 20 30 40 50 60
pF1KE6 MAPEKPEPKKDDAKAAPKAAPAPAPPPEPERPKEVEFDASKIKIEFTPEQIEEFKEAFML
:::.::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 MAPKKPEPKKDDAKAAPKAAPAPAPPPEPERPKEVEFDASKIKIEFTPEQIEEFKEAFML
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 FDRTPKCEMKITYGQCGDVLRALGQNPTQAEVLRVLGKPRQEELNTKMMDFETFLPMLQH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 FDRTPKCEMKITYGQCGDVLRALGQNPTQAEVLRVLGKPRQEELNTKMMDFETFLPMLQH
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 ISKNKDTGTYEDFVEGLRVFDKEGNGTVMGAELRHVLATLGERLTEDEVEKLMAGQEDSN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 ISKNKDTGTYEDFVEGLRVFDKEGNGTVMGAELRHVLATLGERLTEDEVEKLMAGQEDSN
130 140 150 160 170 180
190
pF1KE6 GCINYEAFVKHIMSS
:::::::::::::::
NP_000 GCINYEAFVKHIMSS
190
>>XP_005257448 (OMIM: 160770) PREDICTED: myosin light ch (197 aa)
initn: 987 init1: 987 opt: 1051 Z-score: 896.2 bits: 172.6 E(85289): 3.5e-43
Smith-Waterman score: 1051; 80.1% identity (90.8% similar) in 196 aa overlap (1-194:1-196)
10 20 30 40 50
pF1KE6 MAPEKPEPKKDDAKAAPKAAPAPAP-P-PEPERPKEVEFDASKIKIEFTPEQIEEFKEAF
:::.::::::. :: :: :::::: : : :: ::: :: ...::.:: .:::::::::
XP_005 MAPKKPEPKKEAAKPAPAPAPAPAPAPAPAPEAPKEPAFDPKSVKIDFTADQIEEFKEAF
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE6 MLFDRTPKCEMKITYGQCGDVLRALGQNPTQAEVLRVLGKPRQEELNTKMMDFETFLPML
:::::: :::::::::::::::::::::.::::::::::. ::.:.::.:::::::.:
XP_005 SLFDRTPTGEMKITYGQCGDVLRALGQNPTNAEVLRVLGKPKPEEMNVKMLDFETFLPIL
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE6 QHISKNKDTGTYEDFVEGLRVFDKEGNGTVMGAELRHVLATLGERLTEDEVEKLMAGQED
::::.::. ::::::::::::::::.::::::::::::::::::..:: :::.:.:::::
XP_005 QHISRNKEQGTYEDFVEGLRVFDKESNGTVMGAELRHVLATLGEKMTEAEVEQLLAGQED
130 140 150 160 170 180
180 190
pF1KE6 SNGCINYEAFVKHIMSS
.:::::::::::::::
XP_005 ANGCINYEAFVKHIMSG
190
>>NP_001002841 (OMIM: 160770) myosin light chain 4 [Homo (197 aa)
initn: 987 init1: 987 opt: 1051 Z-score: 896.2 bits: 172.6 E(85289): 3.5e-43
Smith-Waterman score: 1051; 80.1% identity (90.8% similar) in 196 aa overlap (1-194:1-196)
10 20 30 40 50
pF1KE6 MAPEKPEPKKDDAKAAPKAAPAPAP-P-PEPERPKEVEFDASKIKIEFTPEQIEEFKEAF
:::.::::::. :: :: :::::: : : :: ::: :: ...::.:: .:::::::::
NP_001 MAPKKPEPKKEAAKPAPAPAPAPAPAPAPAPEAPKEPAFDPKSVKIDFTADQIEEFKEAF
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE6 MLFDRTPKCEMKITYGQCGDVLRALGQNPTQAEVLRVLGKPRQEELNTKMMDFETFLPML
:::::: :::::::::::::::::::::.::::::::::. ::.:.::.:::::::.:
NP_001 SLFDRTPTGEMKITYGQCGDVLRALGQNPTNAEVLRVLGKPKPEEMNVKMLDFETFLPIL
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE6 QHISKNKDTGTYEDFVEGLRVFDKEGNGTVMGAELRHVLATLGERLTEDEVEKLMAGQED
::::.::. ::::::::::::::::.::::::::::::::::::..:: :::.:.:::::
NP_001 QHISRNKEQGTYEDFVEGLRVFDKESNGTVMGAELRHVLATLGEKMTEAEVEQLLAGQED
130 140 150 160 170 180
180 190
pF1KE6 SNGCINYEAFVKHIMSS
.:::::::::::::::
NP_001 ANGCINYEAFVKHIMSG
190
>>NP_002467 (OMIM: 160770) myosin light chain 4 [Homo sa (197 aa)
initn: 987 init1: 987 opt: 1051 Z-score: 896.2 bits: 172.6 E(85289): 3.5e-43
Smith-Waterman score: 1051; 80.1% identity (90.8% similar) in 196 aa overlap (1-194:1-196)
10 20 30 40 50
pF1KE6 MAPEKPEPKKDDAKAAPKAAPAPAP-P-PEPERPKEVEFDASKIKIEFTPEQIEEFKEAF
:::.::::::. :: :: :::::: : : :: ::: :: ...::.:: .:::::::::
NP_002 MAPKKPEPKKEAAKPAPAPAPAPAPAPAPAPEAPKEPAFDPKSVKIDFTADQIEEFKEAF
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE6 MLFDRTPKCEMKITYGQCGDVLRALGQNPTQAEVLRVLGKPRQEELNTKMMDFETFLPML
:::::: :::::::::::::::::::::.::::::::::. ::.:.::.:::::::.:
NP_002 SLFDRTPTGEMKITYGQCGDVLRALGQNPTNAEVLRVLGKPKPEEMNVKMLDFETFLPIL
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE6 QHISKNKDTGTYEDFVEGLRVFDKEGNGTVMGAELRHVLATLGERLTEDEVEKLMAGQED
::::.::. ::::::::::::::::.::::::::::::::::::..:: :::.:.:::::
NP_002 QHISRNKEQGTYEDFVEGLRVFDKESNGTVMGAELRHVLATLGEKMTEAEVEQLLAGQED
130 140 150 160 170 180
180 190
pF1KE6 SNGCINYEAFVKHIMSS
.:::::::::::::::
NP_002 ANGCINYEAFVKHIMSG
190
>>NP_524144 (OMIM: 160780) myosin light chain 1/3, skele (194 aa)
initn: 706 init1: 706 opt: 885 Z-score: 757.5 bits: 146.9 E(85289): 1.9e-35
Smith-Waterman score: 885; 71.8% identity (83.1% similar) in 195 aa overlap (1-194:1-193)
10 20 30 40 50
pF1KE6 MAPEKPEPKK-DDAKAAPKAAPAPAPPPEPERPKEVEFDASKIKIEFTPEQIEEFKEAFM
:::.: : : ::: :::::: : : .::: ..: : :::::. :: .::::::.
NP_524 MAPKKDVKKPVAAAAAAPAPAPAPAPAPAPAKPKEEKIDLSAIKIEFSKEQQDEFKEAFL
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE6 LFDRTPKCEMKITYGQCGDVLRALGQNPTQAEVLRVLGKPRQEELNTKMMDFETFLPMLQ
::::: . ::: .: :::::::: :::.::: .:::.: .::::.: ..:: ::::.:
NP_524 LFDRTG--DSKITLSQVGDVLRALGTNPTNAEVRKVLGNPSNEELNAKKIEFEQFLPMMQ
70 80 90 100 110
120 130 140 150 160 170
pF1KE6 HISKNKDTGTYEDFVEGLRVFDKEGNGTVMGAELRHVLATLGERLTEDEVEKLMAGQEDS
::.::: .::::::::::::::::::::::::::::::::::.. :.::: ::::::::
NP_524 AISNNKDQATYEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMKEEEVEALMAGQEDS
120 130 140 150 160 170
180 190
pF1KE6 NGCINYEAFVKHIMSS
:::::::::::::::
NP_524 NGCINYEAFVKHIMSI
180 190
>>XP_016880173 (OMIM: 160770) PREDICTED: myosin light ch (228 aa)
initn: 1010 init1: 825 opt: 825 Z-score: 706.3 bits: 137.7 E(85289): 1.3e-32
Smith-Waterman score: 972; 69.0% identity (78.3% similar) in 226 aa overlap (2-194:2-227)
10 20 30 40 50
pF1KE6 MAPEKPEPKKDDAKAAPKAAPAPAP-P-PEPERPKEVEFDASKIKIEFTPEQIE------
::.::::::. :: :: :::::: : : :: ::: :: ...::.:: .:::
XP_016 MAPKKPEPKKEAAKPAPAPAPAPAPAPAPAPEAPKEPAFDPKSVKIDFTADQIEGEYGQP
10 20 30 40 50 60
60 70 80
pF1KE6 -------------------------EFKEAFMLFDRTPKCEMKITYGQCGDVLRALGQNP
:::::: :::::: ::::::::::::::::::::
XP_016 HLSVSIALSWRRRRRRKKRRSSCPHEFKEAFSLFDRTPTGEMKITYGQCGDVLRALGQNP
70 80 90 100 110 120
90 100 110 120 130 140
pF1KE6 TQAEVLRVLGKPRQEELNTKMMDFETFLPMLQHISKNKDTGTYEDFVEGLRVFDKEGNGT
:.::::::::::. ::.:.::.:::::::.:::::.::. ::::::::::::::::.:::
XP_016 TNAEVLRVLGKPKPEEMNVKMLDFETFLPILQHISRNKEQGTYEDFVEGLRVFDKESNGT
130 140 150 160 170 180
150 160 170 180 190
pF1KE6 VMGAELRHVLATLGERLTEDEVEKLMAGQEDSNGCINYEAFVKHIMSS
:::::::::::::::..:: :::.:.:::::.:::::::::::::::
XP_016 VMGAELRHVLATLGEKMTEAEVEQLLAGQEDANGCINYEAFVKHIMSG
190 200 210 220
>>XP_011523141 (OMIM: 160770) PREDICTED: myosin light ch (228 aa)
initn: 1010 init1: 825 opt: 825 Z-score: 706.3 bits: 137.7 E(85289): 1.3e-32
Smith-Waterman score: 972; 69.0% identity (78.3% similar) in 226 aa overlap (2-194:2-227)
10 20 30 40 50
pF1KE6 MAPEKPEPKKDDAKAAPKAAPAPAP-P-PEPERPKEVEFDASKIKIEFTPEQIE------
::.::::::. :: :: :::::: : : :: ::: :: ...::.:: .:::
XP_011 MAPKKPEPKKEAAKPAPAPAPAPAPAPAPAPEAPKEPAFDPKSVKIDFTADQIEGEYGQP
10 20 30 40 50 60
60 70 80
pF1KE6 -------------------------EFKEAFMLFDRTPKCEMKITYGQCGDVLRALGQNP
:::::: :::::: ::::::::::::::::::::
XP_011 HLSVSIALSWRRRRRRKKRRSSCPHEFKEAFSLFDRTPTGEMKITYGQCGDVLRALGQNP
70 80 90 100 110 120
90 100 110 120 130 140
pF1KE6 TQAEVLRVLGKPRQEELNTKMMDFETFLPMLQHISKNKDTGTYEDFVEGLRVFDKEGNGT
:.::::::::::. ::.:.::.:::::::.:::::.::. ::::::::::::::::.:::
XP_011 TNAEVLRVLGKPKPEEMNVKMLDFETFLPILQHISRNKEQGTYEDFVEGLRVFDKESNGT
130 140 150 160 170 180
150 160 170 180 190
pF1KE6 VMGAELRHVLATLGERLTEDEVEKLMAGQEDSNGCINYEAFVKHIMSS
:::::::::::::::..:: :::.:.:::::.:::::::::::::::
XP_011 VMGAELRHVLATLGEKMTEAEVEQLLAGQEDANGCINYEAFVKHIMSG
190 200 210 220
>>XP_016880172 (OMIM: 160770) PREDICTED: myosin light ch (228 aa)
initn: 1010 init1: 825 opt: 825 Z-score: 706.3 bits: 137.7 E(85289): 1.3e-32
Smith-Waterman score: 972; 69.0% identity (78.3% similar) in 226 aa overlap (2-194:2-227)
10 20 30 40 50
pF1KE6 MAPEKPEPKKDDAKAAPKAAPAPAP-P-PEPERPKEVEFDASKIKIEFTPEQIE------
::.::::::. :: :: :::::: : : :: ::: :: ...::.:: .:::
XP_016 MAPKKPEPKKEAAKPAPAPAPAPAPAPAPAPEAPKEPAFDPKSVKIDFTADQIEGEYGQP
10 20 30 40 50 60
60 70 80
pF1KE6 -------------------------EFKEAFMLFDRTPKCEMKITYGQCGDVLRALGQNP
:::::: :::::: ::::::::::::::::::::
XP_016 HLSVSIALSWRRRRRRKKRRSSCPHEFKEAFSLFDRTPTGEMKITYGQCGDVLRALGQNP
70 80 90 100 110 120
90 100 110 120 130 140
pF1KE6 TQAEVLRVLGKPRQEELNTKMMDFETFLPMLQHISKNKDTGTYEDFVEGLRVFDKEGNGT
:.::::::::::. ::.:.::.:::::::.:::::.::. ::::::::::::::::.:::
XP_016 TNAEVLRVLGKPKPEEMNVKMLDFETFLPILQHISRNKEQGTYEDFVEGLRVFDKESNGT
130 140 150 160 170 180
150 160 170 180 190
pF1KE6 VMGAELRHVLATLGERLTEDEVEKLMAGQEDSNGCINYEAFVKHIMSS
:::::::::::::::..:: :::.:.:::::.:::::::::::::::
XP_016 VMGAELRHVLATLGEKMTEAEVEQLLAGQEDANGCINYEAFVKHIMSG
190 200 210 220
>>NP_001186558 (OMIM: 609930) myosin light chain 6B [Hom (208 aa)
initn: 864 init1: 647 opt: 808 Z-score: 692.7 bits: 135.1 E(85289): 7.6e-32
Smith-Waterman score: 808; 63.4% identity (82.7% similar) in 191 aa overlap (5-194:19-207)
10 20 30 40
pF1KE6 MAPEKPEPKKDDAKAAP-KAAPAPAPPPEPERPKEVEFDASKIKIE
:: : : : : :. :: : :.. .: : ::. ::
NP_001 MPPKKDVPVKKPAGPSISKPAAKPAAAGAPPAKTKAEPAVPQAPQKTQEPPVDLSKVVIE
10 20 30 40 50 60
50 60 70 80 90 100
pF1KE6 FTPEQIEEFKEAFMLFDRTPKCEMKITYGQCGDVLRALGQNPTQAEVLRVLGKPRQEELN
:. .:.::::::: ::::. . :: :.:::::.::::::::.::::.:::.:...::.
NP_001 FNKDQLEEFKEAFELFDRVG--DGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELK
70 80 90 100 110
110 120 130 140 150 160
pF1KE6 TKMMDFETFLPMLQHISKNKDTGTYEDFVEGLRVFDKEGNGTVMGAELRHVLATLGERLT
.. .:::::::::: ..::. :::::..::.::::::::: ::::::::::.::::..:
NP_001 SRRVDFETFLPMLQAVAKNRGQGTYEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKMT
120 130 140 150 160 170
170 180 190
pF1KE6 EDEVEKLMAGQEDSNGCINYEAFVKHIMSS
:.::: ..::.::::::::::::.:::.:
NP_001 EEEVETVLAGHEDSNGCINYEAFLKHILSV
180 190 200
>>NP_002466 (OMIM: 609930) myosin light chain 6B [Homo s (208 aa)
initn: 864 init1: 647 opt: 808 Z-score: 692.7 bits: 135.1 E(85289): 7.6e-32
Smith-Waterman score: 808; 63.4% identity (82.7% similar) in 191 aa overlap (5-194:19-207)
10 20 30 40
pF1KE6 MAPEKPEPKKDDAKAAP-KAAPAPAPPPEPERPKEVEFDASKIKIE
:: : : : : :. :: : :.. .: : ::. ::
NP_002 MPPKKDVPVKKPAGPSISKPAAKPAAAGAPPAKTKAEPAVPQAPQKTQEPPVDLSKVVIE
10 20 30 40 50 60
50 60 70 80 90 100
pF1KE6 FTPEQIEEFKEAFMLFDRTPKCEMKITYGQCGDVLRALGQNPTQAEVLRVLGKPRQEELN
:. .:.::::::: ::::. . :: :.:::::.::::::::.::::.:::.:...::.
NP_002 FNKDQLEEFKEAFELFDRVG--DGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELK
70 80 90 100 110
110 120 130 140 150 160
pF1KE6 TKMMDFETFLPMLQHISKNKDTGTYEDFVEGLRVFDKEGNGTVMGAELRHVLATLGERLT
.. .:::::::::: ..::. :::::..::.::::::::: ::::::::::.::::..:
NP_002 SRRVDFETFLPMLQAVAKNRGQGTYEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKMT
120 130 140 150 160 170
170 180 190
pF1KE6 EDEVEKLMAGQEDSNGCINYEAFVKHIMSS
:.::: ..::.::::::::::::.:::.:
NP_002 EEEVETVLAGHEDSNGCINYEAFLKHILSV
180 190 200
195 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 14:02:21 2016 done: Tue Nov 8 14:02:22 2016
Total Scan time: 6.460 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]