FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6455, 569 aa 1>>>pF1KE6455 569 - 569 aa - 569 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 10.0306+/-0.00101; mu= -0.0293+/- 0.062 mean_var=301.2741+/-61.505, 0's: 0 Z-trim(114.8): 24 B-trim: 0 in 0/53 Lambda= 0.073891 statistics sampled from 15372 (15395) to 15372 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.776), E-opt: 0.2 (0.473), width: 16 Scan time: 3.180 The best scores are: opt bits E(32554) CCDS7647.1 MMP21 gene_id:118856|Hs108|chr10 ( 569) 4040 444.1 2.1e-124 >>CCDS7647.1 MMP21 gene_id:118856|Hs108|chr10 (569 aa) initn: 4040 init1: 4040 opt: 4040 Z-score: 2346.8 bits: 444.1 E(32554): 2.1e-124 Smith-Waterman score: 4040; 100.0% identity (100.0% similar) in 569 aa overlap (1-569:1-569) 10 20 30 40 50 60 pF1KE6 MLAASIFRPTLLLCWLAAPWPTQPESLFHSRDRSDLEPSPLRQAKPIADLHAAQRFLSRY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 MLAASIFRPTLLLCWLAAPWPTQPESLFHSRDRSDLEPSPLRQAKPIADLHAAQRFLSRY 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 GWSGVWAAWGPSPEGPPETPKGAALAEAVRRFQRANALPASGELDAATLAAMNRPRCGVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 GWSGVWAAWGPSPEGPPETPKGAALAEAVRRFQRANALPASGELDAATLAAMNRPRCGVP 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 DMRPPPPSAPPSPPGPPPRARSRRSPRAPLSLSRRGWQPRGYPDGGAAQAFSKRTLSWRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 DMRPPPPSAPPSPPGPPPRARSRRSPRAPLSLSRRGWQPRGYPDGGAAQAFSKRTLSWRL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 LGEALSSQLSVADQRRIVALAFRMWSEVTPLDFREDLAAPGAAVDIKLGFGRGRHLGCPR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 LGEALSSQLSVADQRRIVALAFRMWSEVTPLDFREDLAAPGAAVDIKLGFGRGRHLGCPR 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE6 AFDGSGQEFAHAWRLGDIHFDDDEHFTPPTSDTGISLLKVAVHEIGHVLGLPHTYRTGSI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 AFDGSGQEFAHAWRLGDIHFDDDEHFTPPTSDTGISLLKVAVHEIGHVLGLPHTYRTGSI 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE6 MQPNYIPQEPAFELDWSDRKAIQKLYGSCEGSFDTAFDWIRKERNQYGEVMVRFSTYFFR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 MQPNYIPQEPAFELDWSDRKAIQKLYGSCEGSFDTAFDWIRKERNQYGEVMVRFSTYFFR 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE6 NSWYWLYENRNNRTRYGDPIQILTGWPGIPTHNIDAFVHIWTWKRDERYFFQGNQYWRYD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 NSWYWLYENRNNRTRYGDPIQILTGWPGIPTHNIDAFVHIWTWKRDERYFFQGNQYWRYD 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE6 SDKDQALTEDEQGKSYPKLISEGFPGIPSPLDTAFYDRRQKLIYFFKESLVFAFDVNRNR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 SDKDQALTEDEQGKSYPKLISEGFPGIPSPLDTAFYDRRQKLIYFFKESLVFAFDVNRNR 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE6 VLNSYPKRITEVFPAVIPQNHPFRNIDSAYYSYAYNSIFFFKGNAYWKVVNDKDKQQNSW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 VLNSYPKRITEVFPAVIPQNHPFRNIDSAYYSYAYNSIFFFKGNAYWKVVNDKDKQQNSW 490 500 510 520 530 540 550 560 pF1KE6 LPANGLFPKKFISEKWFDVCDVHISTLNM ::::::::::::::::::::::::::::: CCDS76 LPANGLFPKKFISEKWFDVCDVHISTLNM 550 560 569 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 13:27:35 2016 done: Tue Nov 8 13:27:36 2016 Total Scan time: 3.180 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]