Result of FASTA (omim) for
pFN21AE6448
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE6448, 541 aa
1>>>pF1KE6448 541 - 541 aa - 541 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.7029+/-0.000327; mu= 11.2871+/- 0.020
mean_var=287.4987+/-59.171, 0's: 0 Z-trim(124.8): 1774 B-trim: 46 in 1/60
Lambda= 0.075641
statistics sampled from 45205 (47334) to 45205 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.825), E-opt: 0.2 (0.555), width: 16
Scan time: 11.000
The best scores are: opt bits E(85289)
NP_653232 (OMIM: 613598,613617) zinc finger protei ( 541) 4004 450.3 7.2e-126
XP_005264199 (OMIM: 613598,613617) PREDICTED: zinc ( 479) 3587 404.7 3.3e-112
NP_001188388 (OMIM: 613598,613617) zinc finger pro ( 479) 3587 404.7 3.3e-112
XP_005264200 (OMIM: 613598,613617) PREDICTED: zinc ( 373) 2808 319.5 1.1e-86
XP_016885222 (OMIM: 300573) PREDICTED: zinc finger ( 513) 571 75.6 4.1e-13
XP_016885221 (OMIM: 300573) PREDICTED: zinc finger ( 513) 571 75.6 4.1e-13
XP_016885218 (OMIM: 300573) PREDICTED: zinc finger ( 514) 571 75.6 4.1e-13
XP_016885219 (OMIM: 300573) PREDICTED: zinc finger ( 514) 571 75.6 4.1e-13
XP_016885220 (OMIM: 300573) PREDICTED: zinc finger ( 514) 571 75.6 4.1e-13
XP_016885217 (OMIM: 300573) PREDICTED: zinc finger ( 514) 571 75.6 4.1e-13
XP_011542247 (OMIM: 300573) PREDICTED: zinc finger ( 514) 571 75.6 4.1e-13
XP_011542246 (OMIM: 300573) PREDICTED: zinc finger ( 545) 571 75.6 4.3e-13
NP_001139763 (OMIM: 300573) zinc finger protein 67 ( 575) 571 75.7 4.4e-13
NP_001177346 (OMIM: 300573) zinc finger protein 67 ( 576) 571 75.7 4.4e-13
XP_011542245 (OMIM: 300573) PREDICTED: zinc finger ( 580) 571 75.7 4.4e-13
XP_011542243 (OMIM: 300573) PREDICTED: zinc finger ( 581) 571 75.7 4.4e-13
NP_001034980 (OMIM: 300573) zinc finger protein 67 ( 581) 571 75.7 4.4e-13
XP_016867415 (OMIM: 611272) PREDICTED: zinc finger ( 575) 547 73.0 2.7e-12
NP_001305013 (OMIM: 611272) zinc finger protein wi ( 575) 547 73.0 2.7e-12
XP_016867416 (OMIM: 611272) PREDICTED: zinc finger ( 575) 547 73.0 2.7e-12
XP_016867414 (OMIM: 611272) PREDICTED: zinc finger ( 689) 547 73.2 3e-12
XP_011514301 (OMIM: 611272) PREDICTED: zinc finger ( 690) 547 73.2 3e-12
NP_001305012 (OMIM: 611272) zinc finger protein wi ( 766) 547 73.2 3.2e-12
XP_016867413 (OMIM: 611272) PREDICTED: zinc finger ( 766) 547 73.2 3.2e-12
XP_016867412 (OMIM: 611272) PREDICTED: zinc finger ( 766) 547 73.2 3.2e-12
XP_016867409 (OMIM: 611272) PREDICTED: zinc finger ( 838) 547 73.3 3.4e-12
XP_016867410 (OMIM: 611272) PREDICTED: zinc finger ( 838) 547 73.3 3.4e-12
XP_016867411 (OMIM: 611272) PREDICTED: zinc finger ( 838) 547 73.3 3.4e-12
NP_001305011 (OMIM: 611272) zinc finger protein wi ( 839) 547 73.3 3.4e-12
XP_016867408 (OMIM: 611272) PREDICTED: zinc finger ( 839) 547 73.3 3.4e-12
NP_659570 (OMIM: 611272) zinc finger protein with ( 839) 547 73.3 3.4e-12
XP_016867407 (OMIM: 611272) PREDICTED: zinc finger ( 839) 547 73.3 3.4e-12
NP_055384 (OMIM: 611272) zinc finger protein with ( 839) 547 73.3 3.4e-12
NP_001303926 (OMIM: 606957) zinc finger protein 25 ( 487) 522 70.2 1.6e-11
NP_001303927 (OMIM: 606957) zinc finger protein 25 ( 487) 522 70.2 1.6e-11
NP_001303925 (OMIM: 606957) zinc finger protein 25 ( 531) 522 70.3 1.7e-11
NP_258429 (OMIM: 606957) zinc finger protein 257 i ( 563) 522 70.3 1.8e-11
NP_612474 (OMIM: 165280) zinc finger protein GLI4 ( 376) 474 64.8 5.3e-10
NP_003566 (OMIM: 603397) zinc finger protein 282 i ( 671) 477 65.5 5.9e-10
XP_006716214 (OMIM: 603397) PREDICTED: zinc finger ( 672) 477 65.5 5.9e-10
XP_016882746 (OMIM: 603977) PREDICTED: zinc finger (1168) 476 65.7 8.8e-10
NP_009084 (OMIM: 603977) zinc finger protein 208 i (1280) 476 65.8 9.3e-10
XP_005259428 (OMIM: 610671) PREDICTED: zinc finger (1055) 468 64.8 1.5e-09
NP_149104 (OMIM: 610671) zinc finger protein 628 [ (1059) 468 64.8 1.5e-09
NP_001273627 (OMIM: 194552) zinc finger protein 79 ( 364) 455 62.7 2.2e-09
XP_006717342 (OMIM: 194552) PREDICTED: zinc finger ( 474) 457 63.1 2.2e-09
NP_001273626 (OMIM: 194552) zinc finger protein 79 ( 474) 457 63.1 2.2e-09
NP_001273625 (OMIM: 194552) zinc finger protein 79 ( 474) 457 63.1 2.2e-09
NP_001309189 (OMIM: 194552) zinc finger protein 79 ( 474) 457 63.1 2.2e-09
NP_009066 (OMIM: 194552) zinc finger protein 79 is ( 498) 457 63.1 2.3e-09
>>NP_653232 (OMIM: 613598,613617) zinc finger protein 51 (541 aa)
initn: 4004 init1: 4004 opt: 4004 Z-score: 2380.8 bits: 450.3 E(85289): 7.2e-126
Smith-Waterman score: 4004; 100.0% identity (100.0% similar) in 541 aa overlap (1-541:1-541)
10 20 30 40 50 60
pF1KE6 MPRRKQSHPQPVKCEGVKVDTEDSLDEGPGALVLESDLLLGQDLEFEEEEEEEEGDGNSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_653 MPRRKQSHPQPVKCEGVKVDTEDSLDEGPGALVLESDLLLGQDLEFEEEEEEEEGDGNSD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 QLMGFERDSEGDSLGARPGLPYGLSDDESGGGRALSAESEVEEPARGPGEARGERPGPAC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_653 QLMGFERDSEGDSLGARPGLPYGLSDDESGGGRALSAESEVEEPARGPGEARGERPGPAC
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 QLCGGPTGEGPCCGAGGPGGGPLLPPRLLYSCRLCTFVSHYSSHLKRHMQTHSGEKPFRC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_653 QLCGGPTGEGPCCGAGGPGGGPLLPPRLLYSCRLCTFVSHYSSHLKRHMQTHSGEKPFRC
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 GRCPYASAQLVNLTRHTRTHTGEKPYRCPHCPFACSSLGNLRRHQRTHAGPPTPPCPTCG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_653 GRCPYASAQLVNLTRHTRTHTGEKPYRCPHCPFACSSLGNLRRHQRTHAGPPTPPCPTCG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE6 FRCCTPRPARPPSPTEQEGAVPRRPEDALLLPDLSLHVPPGGASFLPDCGQLRGEGEGLC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_653 FRCCTPRPARPPSPTEQEGAVPRRPEDALLLPDLSLHVPPGGASFLPDCGQLRGEGEGLC
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE6 GTGSEPLPELLFPWTCRGCGQELEEGEGSRLGAAMCGRCMRGEAGGGASGGPQGPSDKGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_653 GTGSEPLPELLFPWTCRGCGQELEEGEGSRLGAAMCGRCMRGEAGGGASGGPQGPSDKGF
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE6 ACSLCPFATHYPNHLARHMKTHSGEKPFRCARCPYASAHLDNLKRHQRVHTGEKPYKCPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_653 ACSLCPFATHYPNHLARHMKTHSGEKPFRCARCPYASAHLDNLKRHQRVHTGEKPYKCPL
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE6 CPYACGNLANLKRHGRIHSGDKPFRCSLCNYSCNQSMNLKRHMLRHTGEKPFRCATCAYT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_653 CPYACGNLANLKRHGRIHSGDKPFRCSLCNYSCNQSMNLKRHMLRHTGEKPFRCATCAYT
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE6 TGHWDNYKRHQKVHGHGGAGGPGLSASEGWAPPHSPPSVLSSRGPPALGTAGSRAVHTDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_653 TGHWDNYKRHQKVHGHGGAGGPGLSASEGWAPPHSPPSVLSSRGPPALGTAGSRAVHTDS
490 500 510 520 530 540
pF1KE6 S
:
NP_653 S
>>XP_005264199 (OMIM: 613598,613617) PREDICTED: zinc fin (479 aa)
initn: 3587 init1: 3587 opt: 3587 Z-score: 2135.4 bits: 404.7 E(85289): 3.3e-112
Smith-Waterman score: 3587; 100.0% identity (100.0% similar) in 479 aa overlap (63-541:1-479)
40 50 60 70 80 90
pF1KE6 VLESDLLLGQDLEFEEEEEEEEGDGNSDQLMGFERDSEGDSLGARPGLPYGLSDDESGGG
::::::::::::::::::::::::::::::
XP_005 MGFERDSEGDSLGARPGLPYGLSDDESGGG
10 20 30
100 110 120 130 140 150
pF1KE6 RALSAESEVEEPARGPGEARGERPGPACQLCGGPTGEGPCCGAGGPGGGPLLPPRLLYSC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RALSAESEVEEPARGPGEARGERPGPACQLCGGPTGEGPCCGAGGPGGGPLLPPRLLYSC
40 50 60 70 80 90
160 170 180 190 200 210
pF1KE6 RLCTFVSHYSSHLKRHMQTHSGEKPFRCGRCPYASAQLVNLTRHTRTHTGEKPYRCPHCP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RLCTFVSHYSSHLKRHMQTHSGEKPFRCGRCPYASAQLVNLTRHTRTHTGEKPYRCPHCP
100 110 120 130 140 150
220 230 240 250 260 270
pF1KE6 FACSSLGNLRRHQRTHAGPPTPPCPTCGFRCCTPRPARPPSPTEQEGAVPRRPEDALLLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 FACSSLGNLRRHQRTHAGPPTPPCPTCGFRCCTPRPARPPSPTEQEGAVPRRPEDALLLP
160 170 180 190 200 210
280 290 300 310 320 330
pF1KE6 DLSLHVPPGGASFLPDCGQLRGEGEGLCGTGSEPLPELLFPWTCRGCGQELEEGEGSRLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DLSLHVPPGGASFLPDCGQLRGEGEGLCGTGSEPLPELLFPWTCRGCGQELEEGEGSRLG
220 230 240 250 260 270
340 350 360 370 380 390
pF1KE6 AAMCGRCMRGEAGGGASGGPQGPSDKGFACSLCPFATHYPNHLARHMKTHSGEKPFRCAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AAMCGRCMRGEAGGGASGGPQGPSDKGFACSLCPFATHYPNHLARHMKTHSGEKPFRCAR
280 290 300 310 320 330
400 410 420 430 440 450
pF1KE6 CPYASAHLDNLKRHQRVHTGEKPYKCPLCPYACGNLANLKRHGRIHSGDKPFRCSLCNYS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 CPYASAHLDNLKRHQRVHTGEKPYKCPLCPYACGNLANLKRHGRIHSGDKPFRCSLCNYS
340 350 360 370 380 390
460 470 480 490 500 510
pF1KE6 CNQSMNLKRHMLRHTGEKPFRCATCAYTTGHWDNYKRHQKVHGHGGAGGPGLSASEGWAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 CNQSMNLKRHMLRHTGEKPFRCATCAYTTGHWDNYKRHQKVHGHGGAGGPGLSASEGWAP
400 410 420 430 440 450
520 530 540
pF1KE6 PHSPPSVLSSRGPPALGTAGSRAVHTDSS
:::::::::::::::::::::::::::::
XP_005 PHSPPSVLSSRGPPALGTAGSRAVHTDSS
460 470
>>NP_001188388 (OMIM: 613598,613617) zinc finger protein (479 aa)
initn: 3587 init1: 3587 opt: 3587 Z-score: 2135.4 bits: 404.7 E(85289): 3.3e-112
Smith-Waterman score: 3587; 100.0% identity (100.0% similar) in 479 aa overlap (63-541:1-479)
40 50 60 70 80 90
pF1KE6 VLESDLLLGQDLEFEEEEEEEEGDGNSDQLMGFERDSEGDSLGARPGLPYGLSDDESGGG
::::::::::::::::::::::::::::::
NP_001 MGFERDSEGDSLGARPGLPYGLSDDESGGG
10 20 30
100 110 120 130 140 150
pF1KE6 RALSAESEVEEPARGPGEARGERPGPACQLCGGPTGEGPCCGAGGPGGGPLLPPRLLYSC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RALSAESEVEEPARGPGEARGERPGPACQLCGGPTGEGPCCGAGGPGGGPLLPPRLLYSC
40 50 60 70 80 90
160 170 180 190 200 210
pF1KE6 RLCTFVSHYSSHLKRHMQTHSGEKPFRCGRCPYASAQLVNLTRHTRTHTGEKPYRCPHCP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RLCTFVSHYSSHLKRHMQTHSGEKPFRCGRCPYASAQLVNLTRHTRTHTGEKPYRCPHCP
100 110 120 130 140 150
220 230 240 250 260 270
pF1KE6 FACSSLGNLRRHQRTHAGPPTPPCPTCGFRCCTPRPARPPSPTEQEGAVPRRPEDALLLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FACSSLGNLRRHQRTHAGPPTPPCPTCGFRCCTPRPARPPSPTEQEGAVPRRPEDALLLP
160 170 180 190 200 210
280 290 300 310 320 330
pF1KE6 DLSLHVPPGGASFLPDCGQLRGEGEGLCGTGSEPLPELLFPWTCRGCGQELEEGEGSRLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DLSLHVPPGGASFLPDCGQLRGEGEGLCGTGSEPLPELLFPWTCRGCGQELEEGEGSRLG
220 230 240 250 260 270
340 350 360 370 380 390
pF1KE6 AAMCGRCMRGEAGGGASGGPQGPSDKGFACSLCPFATHYPNHLARHMKTHSGEKPFRCAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AAMCGRCMRGEAGGGASGGPQGPSDKGFACSLCPFATHYPNHLARHMKTHSGEKPFRCAR
280 290 300 310 320 330
400 410 420 430 440 450
pF1KE6 CPYASAHLDNLKRHQRVHTGEKPYKCPLCPYACGNLANLKRHGRIHSGDKPFRCSLCNYS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CPYASAHLDNLKRHQRVHTGEKPYKCPLCPYACGNLANLKRHGRIHSGDKPFRCSLCNYS
340 350 360 370 380 390
460 470 480 490 500 510
pF1KE6 CNQSMNLKRHMLRHTGEKPFRCATCAYTTGHWDNYKRHQKVHGHGGAGGPGLSASEGWAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CNQSMNLKRHMLRHTGEKPFRCATCAYTTGHWDNYKRHQKVHGHGGAGGPGLSASEGWAP
400 410 420 430 440 450
520 530 540
pF1KE6 PHSPPSVLSSRGPPALGTAGSRAVHTDSS
:::::::::::::::::::::::::::::
NP_001 PHSPPSVLSSRGPPALGTAGSRAVHTDSS
460 470
>>XP_005264200 (OMIM: 613598,613617) PREDICTED: zinc fin (373 aa)
initn: 2808 init1: 2808 opt: 2808 Z-score: 1677.1 bits: 319.5 E(85289): 1.1e-86
Smith-Waterman score: 2808; 100.0% identity (100.0% similar) in 373 aa overlap (169-541:1-373)
140 150 160 170 180 190
pF1KE6 GGGPLLPPRLLYSCRLCTFVSHYSSHLKRHMQTHSGEKPFRCGRCPYASAQLVNLTRHTR
::::::::::::::::::::::::::::::
XP_005 MQTHSGEKPFRCGRCPYASAQLVNLTRHTR
10 20 30
200 210 220 230 240 250
pF1KE6 THTGEKPYRCPHCPFACSSLGNLRRHQRTHAGPPTPPCPTCGFRCCTPRPARPPSPTEQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 THTGEKPYRCPHCPFACSSLGNLRRHQRTHAGPPTPPCPTCGFRCCTPRPARPPSPTEQE
40 50 60 70 80 90
260 270 280 290 300 310
pF1KE6 GAVPRRPEDALLLPDLSLHVPPGGASFLPDCGQLRGEGEGLCGTGSEPLPELLFPWTCRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GAVPRRPEDALLLPDLSLHVPPGGASFLPDCGQLRGEGEGLCGTGSEPLPELLFPWTCRG
100 110 120 130 140 150
320 330 340 350 360 370
pF1KE6 CGQELEEGEGSRLGAAMCGRCMRGEAGGGASGGPQGPSDKGFACSLCPFATHYPNHLARH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 CGQELEEGEGSRLGAAMCGRCMRGEAGGGASGGPQGPSDKGFACSLCPFATHYPNHLARH
160 170 180 190 200 210
380 390 400 410 420 430
pF1KE6 MKTHSGEKPFRCARCPYASAHLDNLKRHQRVHTGEKPYKCPLCPYACGNLANLKRHGRIH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MKTHSGEKPFRCARCPYASAHLDNLKRHQRVHTGEKPYKCPLCPYACGNLANLKRHGRIH
220 230 240 250 260 270
440 450 460 470 480 490
pF1KE6 SGDKPFRCSLCNYSCNQSMNLKRHMLRHTGEKPFRCATCAYTTGHWDNYKRHQKVHGHGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SGDKPFRCSLCNYSCNQSMNLKRHMLRHTGEKPFRCATCAYTTGHWDNYKRHQKVHGHGG
280 290 300 310 320 330
500 510 520 530 540
pF1KE6 AGGPGLSASEGWAPPHSPPSVLSSRGPPALGTAGSRAVHTDSS
:::::::::::::::::::::::::::::::::::::::::::
XP_005 AGGPGLSASEGWAPPHSPPSVLSSRGPPALGTAGSRAVHTDSS
340 350 360 370
>>XP_016885222 (OMIM: 300573) PREDICTED: zinc finger pro (513 aa)
initn: 986 init1: 393 opt: 571 Z-score: 356.3 bits: 75.6 E(85289): 4.1e-13
Smith-Waterman score: 620; 31.9% identity (58.0% similar) in 348 aa overlap (149-494:155-479)
120 130 140 150 160 170
pF1KE6 ACQLCGGPTGEGPCCGAGGPGGGPLLPPRLLYSCRLCTFVSHYSSHLKRHMQTHSGEKPF
::.: : : ...: :..::.::::.
XP_016 ERFFDPNQRGKALHQKQALRKSQRSQTGEKLYKCTECGKVFIQKANLVVHQRTHTGEKPY
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE6 RCGRCPYASAQLVNLTRHTRTHTGEKPYRCPHCPFACSSLGNLRRHQRTHAGPPTPPCPT
.: .: : .: .: : :::::::::.: .: . . ..: .:::::.: :
XP_016 ECCECAKAFSQKSTLIAHQRTHTGEKPYECSECGKTFIQKSTLIKHQRTHTGEKPFVCDK
190 200 210 220 230 240
240 250 260 270 280 290
pF1KE6 C--GFRCCTPRPARPPSPTEQEGAVPRRPEDALLLPDLSLHVPPGGASFLPDCGQLRGEG
: .:. . . .: . . :. . .: .: :.:..
XP_016 CPKAFKSSYHLIRHEKTHIRQAFYKGIKCTTSSLIYQ-RIH-----TSEKPQCSE-----
250 260 270 280 290
300 310 320 330 340 350
pF1KE6 EGLCGTGSEPLPELLFPWTCRGCGQELEEGEGSRLGAAMCGRCMRGEAGGGASGGPQGPS
: .:. : : : .: . : :. ::. .::.. .. . .
XP_016 ---HGKASDEKPSPTKHW--RTHTKE-NIYECSK-----CGKSFRGKSHLSVHQRIH-TG
300 310 320 330 340
360 370 380 390 400 410
pF1KE6 DKGFACSLCPFATHYPNHLARHMKTHSGEKPFRCARCPYASAHLDNLKRHQRVHTGEKPY
.: . ::.: . .::. : .::.::::..: :: : .. ..: :::.:::::::
XP_016 EKPYECSICGKTFSGKSHLSVHHRTHTGEKPYECRRCGKAFGEKSTLIVHQRMHTGEKPY
350 360 370 380 390 400
420 430 440 450 460 470
pF1KE6 KCPLCPYACGNLANLKRHGRIHSGDKPFRCSLCNYSCNQSMNLKRHMLRHTGEKPFRCAT
:: : : .. . : .: :::.:..:..:. :. . ... .: .:. ::::::..:.
XP_016 KCNECGKAFSEKSPLIKHQRIHTGERPYECTDCKKAFSRKSTLIKHQRIHTGEKPYKCSE
410 420 430 440 450 460
480 490 500 510 520 530
pF1KE6 CAYTTGHWDNYKRHQKVHGHGGAGGPGLSASEGWAPPHSPPSVLSSRGPPALGTAGSRAV
:. . . .. :...:
XP_016 CGKAFSVKSTLIVHHRTHTGEKPYECRDCGKAFSGKSTLIKHQRSHTGDKNL
470 480 490 500 510
>>XP_016885221 (OMIM: 300573) PREDICTED: zinc finger pro (513 aa)
initn: 986 init1: 393 opt: 571 Z-score: 356.3 bits: 75.6 E(85289): 4.1e-13
Smith-Waterman score: 620; 31.9% identity (58.0% similar) in 348 aa overlap (149-494:155-479)
120 130 140 150 160 170
pF1KE6 ACQLCGGPTGEGPCCGAGGPGGGPLLPPRLLYSCRLCTFVSHYSSHLKRHMQTHSGEKPF
::.: : : ...: :..::.::::.
XP_016 ERFFDPNQRGKALHQKQALRKSQRSQTGEKLYKCTECGKVFIQKANLVVHQRTHTGEKPY
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE6 RCGRCPYASAQLVNLTRHTRTHTGEKPYRCPHCPFACSSLGNLRRHQRTHAGPPTPPCPT
.: .: : .: .: : :::::::::.: .: . . ..: .:::::.: :
XP_016 ECCECAKAFSQKSTLIAHQRTHTGEKPYECSECGKTFIQKSTLIKHQRTHTGEKPFVCDK
190 200 210 220 230 240
240 250 260 270 280 290
pF1KE6 C--GFRCCTPRPARPPSPTEQEGAVPRRPEDALLLPDLSLHVPPGGASFLPDCGQLRGEG
: .:. . . .: . . :. . .: .: :.:..
XP_016 CPKAFKSSYHLIRHEKTHIRQAFYKGIKCTTSSLIYQ-RIH-----TSEKPQCSE-----
250 260 270 280 290
300 310 320 330 340 350
pF1KE6 EGLCGTGSEPLPELLFPWTCRGCGQELEEGEGSRLGAAMCGRCMRGEAGGGASGGPQGPS
: .:. : : : .: . : :. ::. .::.. .. . .
XP_016 ---HGKASDEKPSPTKHW--RTHTKE-NIYECSK-----CGKSFRGKSHLSVHQRIH-TG
300 310 320 330 340
360 370 380 390 400 410
pF1KE6 DKGFACSLCPFATHYPNHLARHMKTHSGEKPFRCARCPYASAHLDNLKRHQRVHTGEKPY
.: . ::.: . .::. : .::.::::..: :: : .. ..: :::.:::::::
XP_016 EKPYECSICGKTFSGKSHLSVHHRTHTGEKPYECRRCGKAFGEKSTLIVHQRMHTGEKPY
350 360 370 380 390 400
420 430 440 450 460 470
pF1KE6 KCPLCPYACGNLANLKRHGRIHSGDKPFRCSLCNYSCNQSMNLKRHMLRHTGEKPFRCAT
:: : : .. . : .: :::.:..:..:. :. . ... .: .:. ::::::..:.
XP_016 KCNECGKAFSEKSPLIKHQRIHTGERPYECTDCKKAFSRKSTLIKHQRIHTGEKPYKCSE
410 420 430 440 450 460
480 490 500 510 520 530
pF1KE6 CAYTTGHWDNYKRHQKVHGHGGAGGPGLSASEGWAPPHSPPSVLSSRGPPALGTAGSRAV
:. . . .. :...:
XP_016 CGKAFSVKSTLIVHHRTHTGEKPYECRDCGKAFSGKSTLIKHQRSHTGDKNL
470 480 490 500 510
>>XP_016885218 (OMIM: 300573) PREDICTED: zinc finger pro (514 aa)
initn: 986 init1: 393 opt: 571 Z-score: 356.3 bits: 75.6 E(85289): 4.1e-13
Smith-Waterman score: 620; 31.9% identity (58.0% similar) in 348 aa overlap (149-494:156-480)
120 130 140 150 160 170
pF1KE6 ACQLCGGPTGEGPCCGAGGPGGGPLLPPRLLYSCRLCTFVSHYSSHLKRHMQTHSGEKPF
::.: : : ...: :..::.::::.
XP_016 ERFFDPNQRGKALHQKQALRKSQRSQTGEKLYKCTECGKVFIQKANLVVHQRTHTGEKPY
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE6 RCGRCPYASAQLVNLTRHTRTHTGEKPYRCPHCPFACSSLGNLRRHQRTHAGPPTPPCPT
.: .: : .: .: : :::::::::.: .: . . ..: .:::::.: :
XP_016 ECCECAKAFSQKSTLIAHQRTHTGEKPYECSECGKTFIQKSTLIKHQRTHTGEKPFVCDK
190 200 210 220 230 240
240 250 260 270 280 290
pF1KE6 C--GFRCCTPRPARPPSPTEQEGAVPRRPEDALLLPDLSLHVPPGGASFLPDCGQLRGEG
: .:. . . .: . . :. . .: .: :.:..
XP_016 CPKAFKSSYHLIRHEKTHIRQAFYKGIKCTTSSLIYQ-RIH-----TSEKPQCSE-----
250 260 270 280 290
300 310 320 330 340 350
pF1KE6 EGLCGTGSEPLPELLFPWTCRGCGQELEEGEGSRLGAAMCGRCMRGEAGGGASGGPQGPS
: .:. : : : .: . : :. ::. .::.. .. . .
XP_016 ---HGKASDEKPSPTKHW--RTHTKE-NIYECSK-----CGKSFRGKSHLSVHQRIH-TG
300 310 320 330 340
360 370 380 390 400 410
pF1KE6 DKGFACSLCPFATHYPNHLARHMKTHSGEKPFRCARCPYASAHLDNLKRHQRVHTGEKPY
.: . ::.: . .::. : .::.::::..: :: : .. ..: :::.:::::::
XP_016 EKPYECSICGKTFSGKSHLSVHHRTHTGEKPYECRRCGKAFGEKSTLIVHQRMHTGEKPY
350 360 370 380 390 400
420 430 440 450 460 470
pF1KE6 KCPLCPYACGNLANLKRHGRIHSGDKPFRCSLCNYSCNQSMNLKRHMLRHTGEKPFRCAT
:: : : .. . : .: :::.:..:..:. :. . ... .: .:. ::::::..:.
XP_016 KCNECGKAFSEKSPLIKHQRIHTGERPYECTDCKKAFSRKSTLIKHQRIHTGEKPYKCSE
410 420 430 440 450 460
480 490 500 510 520 530
pF1KE6 CAYTTGHWDNYKRHQKVHGHGGAGGPGLSASEGWAPPHSPPSVLSSRGPPALGTAGSRAV
:. . . .. :...:
XP_016 CGKAFSVKSTLIVHHRTHTGEKPYECRDCGKAFSGKSTLIKHQRSHTGDKNL
470 480 490 500 510
>>XP_016885219 (OMIM: 300573) PREDICTED: zinc finger pro (514 aa)
initn: 986 init1: 393 opt: 571 Z-score: 356.3 bits: 75.6 E(85289): 4.1e-13
Smith-Waterman score: 620; 31.9% identity (58.0% similar) in 348 aa overlap (149-494:156-480)
120 130 140 150 160 170
pF1KE6 ACQLCGGPTGEGPCCGAGGPGGGPLLPPRLLYSCRLCTFVSHYSSHLKRHMQTHSGEKPF
::.: : : ...: :..::.::::.
XP_016 ERFFDPNQRGKALHQKQALRKSQRSQTGEKLYKCTECGKVFIQKANLVVHQRTHTGEKPY
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE6 RCGRCPYASAQLVNLTRHTRTHTGEKPYRCPHCPFACSSLGNLRRHQRTHAGPPTPPCPT
.: .: : .: .: : :::::::::.: .: . . ..: .:::::.: :
XP_016 ECCECAKAFSQKSTLIAHQRTHTGEKPYECSECGKTFIQKSTLIKHQRTHTGEKPFVCDK
190 200 210 220 230 240
240 250 260 270 280 290
pF1KE6 C--GFRCCTPRPARPPSPTEQEGAVPRRPEDALLLPDLSLHVPPGGASFLPDCGQLRGEG
: .:. . . .: . . :. . .: .: :.:..
XP_016 CPKAFKSSYHLIRHEKTHIRQAFYKGIKCTTSSLIYQ-RIH-----TSEKPQCSE-----
250 260 270 280 290
300 310 320 330 340 350
pF1KE6 EGLCGTGSEPLPELLFPWTCRGCGQELEEGEGSRLGAAMCGRCMRGEAGGGASGGPQGPS
: .:. : : : .: . : :. ::. .::.. .. . .
XP_016 ---HGKASDEKPSPTKHW--RTHTKE-NIYECSK-----CGKSFRGKSHLSVHQRIH-TG
300 310 320 330 340
360 370 380 390 400 410
pF1KE6 DKGFACSLCPFATHYPNHLARHMKTHSGEKPFRCARCPYASAHLDNLKRHQRVHTGEKPY
.: . ::.: . .::. : .::.::::..: :: : .. ..: :::.:::::::
XP_016 EKPYECSICGKTFSGKSHLSVHHRTHTGEKPYECRRCGKAFGEKSTLIVHQRMHTGEKPY
350 360 370 380 390 400
420 430 440 450 460 470
pF1KE6 KCPLCPYACGNLANLKRHGRIHSGDKPFRCSLCNYSCNQSMNLKRHMLRHTGEKPFRCAT
:: : : .. . : .: :::.:..:..:. :. . ... .: .:. ::::::..:.
XP_016 KCNECGKAFSEKSPLIKHQRIHTGERPYECTDCKKAFSRKSTLIKHQRIHTGEKPYKCSE
410 420 430 440 450 460
480 490 500 510 520 530
pF1KE6 CAYTTGHWDNYKRHQKVHGHGGAGGPGLSASEGWAPPHSPPSVLSSRGPPALGTAGSRAV
:. . . .. :...:
XP_016 CGKAFSVKSTLIVHHRTHTGEKPYECRDCGKAFSGKSTLIKHQRSHTGDKNL
470 480 490 500 510
>>XP_016885220 (OMIM: 300573) PREDICTED: zinc finger pro (514 aa)
initn: 986 init1: 393 opt: 571 Z-score: 356.3 bits: 75.6 E(85289): 4.1e-13
Smith-Waterman score: 620; 31.9% identity (58.0% similar) in 348 aa overlap (149-494:156-480)
120 130 140 150 160 170
pF1KE6 ACQLCGGPTGEGPCCGAGGPGGGPLLPPRLLYSCRLCTFVSHYSSHLKRHMQTHSGEKPF
::.: : : ...: :..::.::::.
XP_016 ERFFDPNQRGKALHQKQALRKSQRSQTGEKLYKCTECGKVFIQKANLVVHQRTHTGEKPY
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE6 RCGRCPYASAQLVNLTRHTRTHTGEKPYRCPHCPFACSSLGNLRRHQRTHAGPPTPPCPT
.: .: : .: .: : :::::::::.: .: . . ..: .:::::.: :
XP_016 ECCECAKAFSQKSTLIAHQRTHTGEKPYECSECGKTFIQKSTLIKHQRTHTGEKPFVCDK
190 200 210 220 230 240
240 250 260 270 280 290
pF1KE6 C--GFRCCTPRPARPPSPTEQEGAVPRRPEDALLLPDLSLHVPPGGASFLPDCGQLRGEG
: .:. . . .: . . :. . .: .: :.:..
XP_016 CPKAFKSSYHLIRHEKTHIRQAFYKGIKCTTSSLIYQ-RIH-----TSEKPQCSE-----
250 260 270 280 290
300 310 320 330 340 350
pF1KE6 EGLCGTGSEPLPELLFPWTCRGCGQELEEGEGSRLGAAMCGRCMRGEAGGGASGGPQGPS
: .:. : : : .: . : :. ::. .::.. .. . .
XP_016 ---HGKASDEKPSPTKHW--RTHTKE-NIYECSK-----CGKSFRGKSHLSVHQRIH-TG
300 310 320 330 340
360 370 380 390 400 410
pF1KE6 DKGFACSLCPFATHYPNHLARHMKTHSGEKPFRCARCPYASAHLDNLKRHQRVHTGEKPY
.: . ::.: . .::. : .::.::::..: :: : .. ..: :::.:::::::
XP_016 EKPYECSICGKTFSGKSHLSVHHRTHTGEKPYECRRCGKAFGEKSTLIVHQRMHTGEKPY
350 360 370 380 390 400
420 430 440 450 460 470
pF1KE6 KCPLCPYACGNLANLKRHGRIHSGDKPFRCSLCNYSCNQSMNLKRHMLRHTGEKPFRCAT
:: : : .. . : .: :::.:..:..:. :. . ... .: .:. ::::::..:.
XP_016 KCNECGKAFSEKSPLIKHQRIHTGERPYECTDCKKAFSRKSTLIKHQRIHTGEKPYKCSE
410 420 430 440 450 460
480 490 500 510 520 530
pF1KE6 CAYTTGHWDNYKRHQKVHGHGGAGGPGLSASEGWAPPHSPPSVLSSRGPPALGTAGSRAV
:. . . .. :...:
XP_016 CGKAFSVKSTLIVHHRTHTGEKPYECRDCGKAFSGKSTLIKHQRSHTGDKNL
470 480 490 500 510
>>XP_016885217 (OMIM: 300573) PREDICTED: zinc finger pro (514 aa)
initn: 986 init1: 393 opt: 571 Z-score: 356.3 bits: 75.6 E(85289): 4.1e-13
Smith-Waterman score: 620; 31.9% identity (58.0% similar) in 348 aa overlap (149-494:156-480)
120 130 140 150 160 170
pF1KE6 ACQLCGGPTGEGPCCGAGGPGGGPLLPPRLLYSCRLCTFVSHYSSHLKRHMQTHSGEKPF
::.: : : ...: :..::.::::.
XP_016 ERFFDPNQRGKALHQKQALRKSQRSQTGEKLYKCTECGKVFIQKANLVVHQRTHTGEKPY
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE6 RCGRCPYASAQLVNLTRHTRTHTGEKPYRCPHCPFACSSLGNLRRHQRTHAGPPTPPCPT
.: .: : .: .: : :::::::::.: .: . . ..: .:::::.: :
XP_016 ECCECAKAFSQKSTLIAHQRTHTGEKPYECSECGKTFIQKSTLIKHQRTHTGEKPFVCDK
190 200 210 220 230 240
240 250 260 270 280 290
pF1KE6 C--GFRCCTPRPARPPSPTEQEGAVPRRPEDALLLPDLSLHVPPGGASFLPDCGQLRGEG
: .:. . . .: . . :. . .: .: :.:..
XP_016 CPKAFKSSYHLIRHEKTHIRQAFYKGIKCTTSSLIYQ-RIH-----TSEKPQCSE-----
250 260 270 280 290
300 310 320 330 340 350
pF1KE6 EGLCGTGSEPLPELLFPWTCRGCGQELEEGEGSRLGAAMCGRCMRGEAGGGASGGPQGPS
: .:. : : : .: . : :. ::. .::.. .. . .
XP_016 ---HGKASDEKPSPTKHW--RTHTKE-NIYECSK-----CGKSFRGKSHLSVHQRIH-TG
300 310 320 330 340
360 370 380 390 400 410
pF1KE6 DKGFACSLCPFATHYPNHLARHMKTHSGEKPFRCARCPYASAHLDNLKRHQRVHTGEKPY
.: . ::.: . .::. : .::.::::..: :: : .. ..: :::.:::::::
XP_016 EKPYECSICGKTFSGKSHLSVHHRTHTGEKPYECRRCGKAFGEKSTLIVHQRMHTGEKPY
350 360 370 380 390 400
420 430 440 450 460 470
pF1KE6 KCPLCPYACGNLANLKRHGRIHSGDKPFRCSLCNYSCNQSMNLKRHMLRHTGEKPFRCAT
:: : : .. . : .: :::.:..:..:. :. . ... .: .:. ::::::..:.
XP_016 KCNECGKAFSEKSPLIKHQRIHTGERPYECTDCKKAFSRKSTLIKHQRIHTGEKPYKCSE
410 420 430 440 450 460
480 490 500 510 520 530
pF1KE6 CAYTTGHWDNYKRHQKVHGHGGAGGPGLSASEGWAPPHSPPSVLSSRGPPALGTAGSRAV
:. . . .. :...:
XP_016 CGKAFSVKSTLIVHHRTHTGEKPYECRDCGKAFSGKSTLIKHQRSHTGDKNL
470 480 490 500 510
541 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 13:24:17 2016 done: Tue Nov 8 13:24:19 2016
Total Scan time: 11.000 Total Display time: 0.050
Function used was FASTA [36.3.4 Apr, 2011]