Result of FASTA (ccds) for
pFN21AE6424
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE6424, 553 aa
1>>>pF1KE6424 553 - 553 aa - 553 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 9.6630+/-0.000848; mu= 1.1093+/- 0.051
mean_var=237.4829+/-47.656, 0's: 0 Z-trim(115.9): 10 B-trim: 2 in 1/51
Lambda= 0.083226
statistics sampled from 16501 (16507) to 16501 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.804), E-opt: 0.2 (0.507), width: 16
Scan time: 3.430
The best scores are: opt bits E(32554)
CCDS11796.1 ASPSCR1 gene_id:79058|Hs108|chr17 ( 553) 3737 461.3 1.4e-129
CCDS58611.1 ASPSCR1 gene_id:79058|Hs108|chr17 ( 647) 3081 382.6 8.1e-106
CCDS82222.1 ASPSCR1 gene_id:79058|Hs108|chr17 ( 501) 2435 304.9 1.5e-82
>>CCDS11796.1 ASPSCR1 gene_id:79058|Hs108|chr17 (553 aa)
initn: 3737 init1: 3737 opt: 3737 Z-score: 2439.9 bits: 461.3 E(32554): 1.4e-129
Smith-Waterman score: 3737; 99.8% identity (99.8% similar) in 553 aa overlap (1-553:1-553)
10 20 30 40 50 60
pF1KE6 MAAPAGGGGSAVSVLAPNGRRHTVKVTPSTVLLQVLEDTCRRQDFNPCEYDLKFQRSVLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 MAAPAGGGGSAVSVLAPNGRRHTVKVTPSTVLLQVLEDTCRRQDFNPCEYDLKFQRSVLD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 LSLQWRFANLPNNAKLEMVPASRSREGPENMVRIALQLDDGSRLQDSFCSGQTLWELLSH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 LSLQWRFANLPNNAKLEMVPASRSREGPENMVRIALQLDDGSRLQDSFCSGQTLWELLSH
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 FPQIRECLQHPGGATPVCVYTRDEVTGEAALRGTTLQSLGLTGGSATIRFVMKCYDPVGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 FPQIRECLQHPGGATPVCVYTRDEVTGEAALRGTTLQSLGLTGGSATIRFVMKCYDPVGK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 TPGSLGSSASAGQAAASAPLPLESGELSRGDLSRPEDADTSGPCCEHTQEKQSTRAPAAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 TPGSLGSSASAGQAAASAPLPLESGELSRGDLSRPEDADTSGPCCEHTQEKQSTRAPAAA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE6 PFVPFSGGGQRQGGPPGPTRPLTSSSAKLPKSLSSPGGPSKPKKSKSGQDPQQEQEQERE
::::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 PFVPFSGGGQRLGGPPGPTRPLTSSSAKLPKSLSSPGGPSKPKKSKSGQDPQQEQEQERE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE6 RDPQQEQERERPVDREPVDREPVVCHPDLEERLQAWPAELPDEFFELTVDDVRRRLAQLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 RDPQQEQERERPVDREPVDREPVVCHPDLEERLQAWPAELPDEFFELTVDDVRRRLAQLK
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE6 SERKRLEEAPLVTKAFREAQIKEKLERYPKVALRVLFPDRYVLQGFFRPSETVGDLRDFV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 SERKRLEEAPLVTKAFREAQIKEKLERYPKVALRVLFPDRYVLQGFFRPSETVGDLRDFV
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE6 RSHLGNPELSFYLFITPPKTVLDDHTQTLFQANLFPAALVHLGAEEPAGVYLEPGLLEHA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 RSHLGNPELSFYLFITPPKTVLDDHTQTLFQANLFPAALVHLGAEEPAGVYLEPGLLEHA
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE6 ISPSAADVLVARYMSRAAGSPSPLPAPDPAPKSEPAAEEGALVPPEPIPGTAQPVKRSLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 ISPSAADVLVARYMSRAAGSPSPLPAPDPAPKSEPAAEEGALVPPEPIPGTAQPVKRSLG
490 500 510 520 530 540
550
pF1KE6 KVPKWLKLPASKR
:::::::::::::
CCDS11 KVPKWLKLPASKR
550
>>CCDS58611.1 ASPSCR1 gene_id:79058|Hs108|chr17 (647 aa)
initn: 3057 init1: 3057 opt: 3081 Z-score: 2013.3 bits: 382.6 E(32554): 8.1e-106
Smith-Waterman score: 3109; 83.8% identity (83.8% similar) in 585 aa overlap (1-491:1-585)
10 20 30 40 50 60
pF1KE6 MAAPAGGGGSAVSVLAPNGRRHTVKVTPSTVLLQVLEDTCRRQDFNPCEYDLKFQRSVLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 MAAPAGGGGSAVSVLAPNGRRHTVKVTPSTVLLQVLEDTCRRQDFNPCEYDLKFQRSVLD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 LSLQWRFANLPNNAKLEMVPASRSREGPENMVRIALQLDDGSRLQDSFCSGQTLWELLSH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 LSLQWRFANLPNNAKLEMVPASRSREGPENMVRIALQLDDGSRLQDSFCSGQTLWELLSH
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 FPQIRECLQHPGGATPVCVYTRDEVTGEAALRGTTLQSLGLTGGSATIRFVMKCYDPVGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 FPQIRECLQHPGGATPVCVYTRDEVTGEAALRGTTLQSLGLTGGSATIRFVMKCYDPVGK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 TPGSLGSSASAGQAAASAPLPLESGELSRGDLSRPEDADTSGPCCEHTQEKQSTRAPAAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 TPGSLGSSASAGQAAASAPLPLESGELSRGDLSRPEDADTSGPCCEHTQEKQSTRAPAAA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE6 PFVPFSGGGQRQGGPPGPTRPLTSSSAKLPKSLSSPGGPSKPKKSKSGQDPQQEQEQERE
::::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 PFVPFSGGGQRLGGPPGPTRPLTSSSAKLPKSLSSPGGPSKPKKSKSGQDPQQEQEQERE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE6 RDPQQEQERERPVDREPVDREPVVCHPDLEERLQAWPAELPDEFFELTVDDVRRRLAQLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 RDPQQEQERERPVDREPVDREPVVCHPDLEERLQAWPAELPDEFFELTVDDVRRRLAQLK
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE6 SERKRLEEAPLVTKAFREAQIKEKLERYPKVALRVLFPDRYVLQGFFRPSETVGDLRDFV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 SERKRLEEAPLVTKAFREAQIKEKLERYPKVALRVLFPDRYVLQGFFRPSETVGDLRDFV
370 380 390 400 410 420
430 440 450
pF1KE6 RSHLGNPELSFYLFITPPKTVLDDHTQTLFQ-----------------------------
:::::::::::::::::::::::::::::::
CCDS58 RSHLGNPELSFYLFITPPKTVLDDHTQTLFQPQLGDRVAPFTLGPSLKRCLGPEQRTRLP
430 440 450 460 470 480
pF1KE6 ------------------------------------------------------------
CCDS58 VVGDGGDVDSGRLLFWGPSRGRASPSTGQPPCHPVCRPSSPPSPRPSSGDPSRVKAGHKH
490 500 510 520 530 540
460 470 480 490 500
pF1KE6 -----ANLFPAALVHLGAEEPAGVYLEPGLLEHAISPSAADVLVARYMSRAAGSPSPLPA
::::::::::::::::::::::::::::::::::::::::
CCDS58 VGTGRANLFPAALVHLGAEEPAGVYLEPGLLEHAISPSAADVLVARYMSRAAGSPSPLPA
550 560 570 580 590 600
510 520 530 540 550
pF1KE6 PDPAPKSEPAAEEGALVPPEPIPGTAQPVKRSLGKVPKWLKLPASKR
CCDS58 PDPAPKSEPAAEEGALVPPEPIPGTAQPVKRSLGKVPKWLKLPASKR
610 620 630 640
>>CCDS82222.1 ASPSCR1 gene_id:79058|Hs108|chr17 (501 aa)
initn: 3316 init1: 2415 opt: 2435 Z-score: 1595.7 bits: 304.9 E(32554): 1.5e-82
Smith-Waterman score: 3150; 94.6% identity (94.6% similar) in 501 aa overlap (78-553:1-501)
50 60 70 80 90 100
pF1KE6 CEYDLKFQRSVLDLSLQWRFANLPNNAKLEMVPASRSREGPENMVRIALQLDDGSRLQDS
::::::::::::::::::::::::::::::
CCDS82 MVPASRSREGPENMVRIALQLDDGSRLQDS
10 20 30
110 120 130 140 150 160
pF1KE6 FCSGQTLWELLSHFPQIRECLQHPGGATPVCVYTRDEVTGEAALRGTTLQSLGLTGGSAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 FCSGQTLWELLSHFPQIRECLQHPGGATPVCVYTRDEVTGEAALRGTTLQSLGLTGGSAT
40 50 60 70 80 90
170 180 190 200 210 220
pF1KE6 IRFVMKCYDPVGKTPGSLGSSASAGQAAASAPLPLESGELSRGDLSRPEDADTSGPCCEH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 IRFVMKCYDPVGKTPGSLGSSASAGQAAASAPLPLESGELSRGDLSRPEDADTSGPCCEH
100 110 120 130 140 150
230 240 250 260 270 280
pF1KE6 TQEKQSTRAPAAAPFVPFSGGGQRQGGPPGPTRPLTSSSAKLPKSLSSPGGPSKPKKSKS
:::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::
CCDS82 TQEKQSTRAPAAAPFVPFSGGGQRLGGPPGPTRPLTSSSAKLPKSLSSPGGPSKPKKSKS
160 170 180 190 200 210
290 300 310 320 330 340
pF1KE6 GQDPQQEQEQERERDPQQEQERERPVDREPVDREPVVCHPDLEERLQAWPAELPDEFFEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 GQDPQQEQEQERERDPQQEQERERPVDREPVDREPVVCHPDLEERLQAWPAELPDEFFEL
220 230 240 250 260 270
350 360 370 380 390 400
pF1KE6 TVDDVRRRLAQLKSERKRLEEAPLVTKAFREAQIKEKLERYPKVALRVLFPDRYVLQGFF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 TVDDVRRRLAQLKSERKRLEEAPLVTKAFREAQIKEKLERYPKVALRVLFPDRYVLQGFF
280 290 300 310 320 330
410 420 430 440
pF1KE6 RPSETVGDLRDFVRSHLGNPELSFYL-------------------------FITPPKTVL
:::::::::::::::::::::::::: ::::::::
CCDS82 RPSETVGDLRDFVRSHLGNPELSFYLCLSSFGRMDGRGPRCFLTRRCLLSSVITPPKTVL
340 350 360 370 380 390
450 460 470 480 490 500
pF1KE6 DDHTQTLFQANLFPAALVHLGAEEPAGVYLEPGLLEHAISPSAADVLVARYMSRAAGSPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 DDHTQTLFQANLFPAALVHLGAEEPAGVYLEPGLLEHAISPSAADVLVARYMSRAAGSPS
400 410 420 430 440 450
510 520 530 540 550
pF1KE6 PLPAPDPAPKSEPAAEEGALVPPEPIPGTAQPVKRSLGKVPKWLKLPASKR
:::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 PLPAPDPAPKSEPAAEEGALVPPEPIPGTAQPVKRSLGKVPKWLKLPASKR
460 470 480 490 500
553 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 13:09:26 2016 done: Tue Nov 8 13:09:27 2016
Total Scan time: 3.430 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]