Result of FASTA (omim) for
pFN21AE6391
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE6391, 414 aa
1>>>pF1KE6391 414 - 414 aa - 414 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.5574+/-0.000526; mu= 7.2887+/- 0.032
mean_var=158.7996+/-30.683, 0's: 0 Z-trim(112.7): 29 B-trim: 268 in 2/53
Lambda= 0.101777
statistics sampled from 21760 (21787) to 21760 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.62), E-opt: 0.2 (0.255), width: 16
Scan time: 7.480
The best scores are: opt bits E(85289)
XP_011535806 (OMIM: 617134) PREDICTED: transmembra ( 457) 2662 403.3 6.2e-112
XP_016876125 (OMIM: 617134) PREDICTED: transmembra ( 428) 2661 403.2 6.5e-112
XP_011535809 (OMIM: 617134) PREDICTED: transmembra ( 411) 2660 403.0 7e-112
XP_011535804 (OMIM: 617134) PREDICTED: transmembra ( 543) 2662 403.4 7.1e-112
XP_011535803 (OMIM: 617134) PREDICTED: transmembra ( 559) 2662 403.4 7.2e-112
XP_016876118 (OMIM: 617134) PREDICTED: transmembra ( 655) 2662 403.5 8.2e-112
XP_011535800 (OMIM: 617134) PREDICTED: transmembra ( 677) 2662 403.5 8.4e-112
XP_006720032 (OMIM: 617134) PREDICTED: transmembra ( 677) 2662 403.5 8.4e-112
NP_060375 (OMIM: 617134) transmembrane and coiled- ( 677) 2662 403.5 8.4e-112
XP_011535811 (OMIM: 617134) PREDICTED: transmembra ( 352) 2238 341.0 2.8e-93
XP_011535808 (OMIM: 617134) PREDICTED: transmembra ( 416) 2238 341.0 3.2e-93
XP_016876123 (OMIM: 617134) PREDICTED: transmembra ( 517) 2238 341.1 3.8e-93
XP_016876122 (OMIM: 617134) PREDICTED: transmembra ( 580) 2238 341.2 4.1e-93
XP_016876119 (OMIM: 617134) PREDICTED: transmembra ( 616) 2238 341.2 4.3e-93
XP_016876124 (OMIM: 617134) PREDICTED: transmembra ( 516) 1333 208.2 3.8e-53
XP_016876121 (OMIM: 617134) PREDICTED: transmembra ( 591) 1333 208.3 4.2e-53
XP_016876120 (OMIM: 617134) PREDICTED: transmembra ( 613) 1333 208.3 4.3e-53
>>XP_011535806 (OMIM: 617134) PREDICTED: transmembrane a (457 aa)
initn: 2685 init1: 2662 opt: 2662 Z-score: 2130.6 bits: 403.3 E(85289): 6.2e-112
Smith-Waterman score: 2662; 99.8% identity (100.0% similar) in 410 aa overlap (1-410:1-410)
10 20 30 40 50 60
pF1KE6 MKVLGRSFFWVLFPVLPWAVQAVEHEEVAQRVIKLHRGRGVAAMQSRQWVRDSCRKLSGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MKVLGRSFFWVLFPVLPWAVQAVEHEEVAQRVIKLHRGRGVAAMQSRQWVRDSCRKLSGL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 LRQKNAVLNKLKTAIGAVEKDVGLSDEEKLFQVHTFEIFQKELNESENSVFQAVYGLQRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LRQKNAVLNKLKTAIGAVEKDVGLSDEEKLFQVHTFEIFQKELNESENSVFQAVYGLQRA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 LQGDYKDVVNMKESSRQRLEALREAAIKEETEYMELLAAEKHQVEALKNMQHQNQSLSML
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LQGDYKDVVNMKESSRQRLEALREAAIKEETEYMELLAAEKHQVEALKNMQHQNQSLSML
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 DEILEDVRKAADRLEEEIEEHAFDDNKSVKGVNFEAVLRVEEEEANSKQNITKREVEDDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DEILEDVRKAADRLEEEIEEHAFDDNKSVKGVNFEAVLRVEEEEANSKQNITKREVEDDL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE6 GLSMLIDSQNNQYILTKPRDSTIPRADHHFIKDIVTIGMLSLPCGWLCTAIGLPTMFGYI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GLSMLIDSQNNQYILTKPRDSTIPRADHHFIKDIVTIGMLSLPCGWLCTAIGLPTMFGYI
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE6 ICGVLLGPSGLNSIKSIVQVETLGEFGVFFTLFLVGLEFSPEKLRKVWKISLQGPCYMTL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ICGVLLGPSGLNSIKSIVQVETLGEFGVFFTLFLVGLEFSPEKLRKVWKISLQGPCYMTL
310 320 330 340 350 360
370 380 390 400 410
pF1KE6 LMIAFGLLWGHLLRIKPTQSVFISTCLSLSSTPLVSRFLMGSARGDKEGNRTAL
:::::::::::::::::::::::::::::::::::::::::::::::::.
XP_011 LMIAFGLLWGHLLRIKPTQSVFISTCLSLSSTPLVSRFLMGSARGDKEGDIDYSTVLLGM
370 380 390 400 410 420
XP_011 LVTQDVQLGLFMAVMPTLIQAGASASSRECLWPFEAF
430 440 450
>>XP_016876125 (OMIM: 617134) PREDICTED: transmembrane a (428 aa)
initn: 2684 init1: 2661 opt: 2661 Z-score: 2130.2 bits: 403.2 E(85289): 6.5e-112
Smith-Waterman score: 2661; 99.8% identity (100.0% similar) in 410 aa overlap (1-410:1-410)
10 20 30 40 50 60
pF1KE6 MKVLGRSFFWVLFPVLPWAVQAVEHEEVAQRVIKLHRGRGVAAMQSRQWVRDSCRKLSGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MKVLGRSFFWVLFPVLPWAVQAVEHEEVAQRVIKLHRGRGVAAMQSRQWVRDSCRKLSGL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 LRQKNAVLNKLKTAIGAVEKDVGLSDEEKLFQVHTFEIFQKELNESENSVFQAVYGLQRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LRQKNAVLNKLKTAIGAVEKDVGLSDEEKLFQVHTFEIFQKELNESENSVFQAVYGLQRA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 LQGDYKDVVNMKESSRQRLEALREAAIKEETEYMELLAAEKHQVEALKNMQHQNQSLSML
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LQGDYKDVVNMKESSRQRLEALREAAIKEETEYMELLAAEKHQVEALKNMQHQNQSLSML
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 DEILEDVRKAADRLEEEIEEHAFDDNKSVKGVNFEAVLRVEEEEANSKQNITKREVEDDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DEILEDVRKAADRLEEEIEEHAFDDNKSVKGVNFEAVLRVEEEEANSKQNITKREVEDDL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE6 GLSMLIDSQNNQYILTKPRDSTIPRADHHFIKDIVTIGMLSLPCGWLCTAIGLPTMFGYI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GLSMLIDSQNNQYILTKPRDSTIPRADHHFIKDIVTIGMLSLPCGWLCTAIGLPTMFGYI
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE6 ICGVLLGPSGLNSIKSIVQVETLGEFGVFFTLFLVGLEFSPEKLRKVWKISLQGPCYMTL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ICGVLLGPSGLNSIKSIVQVETLGEFGVFFTLFLVGLEFSPEKLRKVWKISLQGPCYMTL
310 320 330 340 350 360
370 380 390 400 410
pF1KE6 LMIAFGLLWGHLLRIKPTQSVFISTCLSLSSTPLVSRFLMGSARGDKEGNRTAL
:::::::::::::::::::::::::::::::::::::::::::::::::.
XP_016 LMIAFGLLWGHLLRIKPTQSVFISTCLSLSSTPLVSRFLMGSARGDKEGSLNSFFPIWTP
370 380 390 400 410 420
XP_016 ALCLRDAH
>>XP_011535809 (OMIM: 617134) PREDICTED: transmembrane a (411 aa)
initn: 2660 init1: 2660 opt: 2660 Z-score: 2129.6 bits: 403.0 E(85289): 7e-112
Smith-Waterman score: 2660; 100.0% identity (100.0% similar) in 409 aa overlap (1-409:1-409)
10 20 30 40 50 60
pF1KE6 MKVLGRSFFWVLFPVLPWAVQAVEHEEVAQRVIKLHRGRGVAAMQSRQWVRDSCRKLSGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MKVLGRSFFWVLFPVLPWAVQAVEHEEVAQRVIKLHRGRGVAAMQSRQWVRDSCRKLSGL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 LRQKNAVLNKLKTAIGAVEKDVGLSDEEKLFQVHTFEIFQKELNESENSVFQAVYGLQRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LRQKNAVLNKLKTAIGAVEKDVGLSDEEKLFQVHTFEIFQKELNESENSVFQAVYGLQRA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 LQGDYKDVVNMKESSRQRLEALREAAIKEETEYMELLAAEKHQVEALKNMQHQNQSLSML
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LQGDYKDVVNMKESSRQRLEALREAAIKEETEYMELLAAEKHQVEALKNMQHQNQSLSML
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 DEILEDVRKAADRLEEEIEEHAFDDNKSVKGVNFEAVLRVEEEEANSKQNITKREVEDDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DEILEDVRKAADRLEEEIEEHAFDDNKSVKGVNFEAVLRVEEEEANSKQNITKREVEDDL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE6 GLSMLIDSQNNQYILTKPRDSTIPRADHHFIKDIVTIGMLSLPCGWLCTAIGLPTMFGYI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GLSMLIDSQNNQYILTKPRDSTIPRADHHFIKDIVTIGMLSLPCGWLCTAIGLPTMFGYI
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE6 ICGVLLGPSGLNSIKSIVQVETLGEFGVFFTLFLVGLEFSPEKLRKVWKISLQGPCYMTL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ICGVLLGPSGLNSIKSIVQVETLGEFGVFFTLFLVGLEFSPEKLRKVWKISLQGPCYMTL
310 320 330 340 350 360
370 380 390 400 410
pF1KE6 LMIAFGLLWGHLLRIKPTQSVFISTCLSLSSTPLVSRFLMGSARGDKEGNRTAL
:::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LMIAFGLLWGHLLRIKPTQSVFISTCLSLSSTPLVSRFLMGSARGDKEGLS
370 380 390 400 410
>>XP_011535804 (OMIM: 617134) PREDICTED: transmembrane a (543 aa)
initn: 2685 init1: 2662 opt: 2662 Z-score: 2129.5 bits: 403.4 E(85289): 7.1e-112
Smith-Waterman score: 2662; 99.8% identity (100.0% similar) in 410 aa overlap (1-410:1-410)
10 20 30 40 50 60
pF1KE6 MKVLGRSFFWVLFPVLPWAVQAVEHEEVAQRVIKLHRGRGVAAMQSRQWVRDSCRKLSGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MKVLGRSFFWVLFPVLPWAVQAVEHEEVAQRVIKLHRGRGVAAMQSRQWVRDSCRKLSGL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 LRQKNAVLNKLKTAIGAVEKDVGLSDEEKLFQVHTFEIFQKELNESENSVFQAVYGLQRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LRQKNAVLNKLKTAIGAVEKDVGLSDEEKLFQVHTFEIFQKELNESENSVFQAVYGLQRA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 LQGDYKDVVNMKESSRQRLEALREAAIKEETEYMELLAAEKHQVEALKNMQHQNQSLSML
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LQGDYKDVVNMKESSRQRLEALREAAIKEETEYMELLAAEKHQVEALKNMQHQNQSLSML
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 DEILEDVRKAADRLEEEIEEHAFDDNKSVKGVNFEAVLRVEEEEANSKQNITKREVEDDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DEILEDVRKAADRLEEEIEEHAFDDNKSVKGVNFEAVLRVEEEEANSKQNITKREVEDDL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE6 GLSMLIDSQNNQYILTKPRDSTIPRADHHFIKDIVTIGMLSLPCGWLCTAIGLPTMFGYI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GLSMLIDSQNNQYILTKPRDSTIPRADHHFIKDIVTIGMLSLPCGWLCTAIGLPTMFGYI
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE6 ICGVLLGPSGLNSIKSIVQVETLGEFGVFFTLFLVGLEFSPEKLRKVWKISLQGPCYMTL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ICGVLLGPSGLNSIKSIVQVETLGEFGVFFTLFLVGLEFSPEKLRKVWKISLQGPCYMTL
310 320 330 340 350 360
370 380 390 400 410
pF1KE6 LMIAFGLLWGHLLRIKPTQSVFISTCLSLSSTPLVSRFLMGSARGDKEGNRTAL
:::::::::::::::::::::::::::::::::::::::::::::::::.
XP_011 LMIAFGLLWGHLLRIKPTQSVFISTCLSLSSTPLVSRFLMGSARGDKEGDIDYSTVLLGM
370 380 390 400 410 420
XP_011 LVTQDVQLGLFMAVMPTLIQAGASASSSIVVEVLRILVLIGQILFSLAAVFLLCLVIKKY
430 440 450 460 470 480
>>XP_011535803 (OMIM: 617134) PREDICTED: transmembrane a (559 aa)
initn: 2685 init1: 2662 opt: 2662 Z-score: 2129.4 bits: 403.4 E(85289): 7.2e-112
Smith-Waterman score: 2662; 99.8% identity (100.0% similar) in 410 aa overlap (1-410:1-410)
10 20 30 40 50 60
pF1KE6 MKVLGRSFFWVLFPVLPWAVQAVEHEEVAQRVIKLHRGRGVAAMQSRQWVRDSCRKLSGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MKVLGRSFFWVLFPVLPWAVQAVEHEEVAQRVIKLHRGRGVAAMQSRQWVRDSCRKLSGL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 LRQKNAVLNKLKTAIGAVEKDVGLSDEEKLFQVHTFEIFQKELNESENSVFQAVYGLQRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LRQKNAVLNKLKTAIGAVEKDVGLSDEEKLFQVHTFEIFQKELNESENSVFQAVYGLQRA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 LQGDYKDVVNMKESSRQRLEALREAAIKEETEYMELLAAEKHQVEALKNMQHQNQSLSML
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LQGDYKDVVNMKESSRQRLEALREAAIKEETEYMELLAAEKHQVEALKNMQHQNQSLSML
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 DEILEDVRKAADRLEEEIEEHAFDDNKSVKGVNFEAVLRVEEEEANSKQNITKREVEDDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DEILEDVRKAADRLEEEIEEHAFDDNKSVKGVNFEAVLRVEEEEANSKQNITKREVEDDL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE6 GLSMLIDSQNNQYILTKPRDSTIPRADHHFIKDIVTIGMLSLPCGWLCTAIGLPTMFGYI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GLSMLIDSQNNQYILTKPRDSTIPRADHHFIKDIVTIGMLSLPCGWLCTAIGLPTMFGYI
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE6 ICGVLLGPSGLNSIKSIVQVETLGEFGVFFTLFLVGLEFSPEKLRKVWKISLQGPCYMTL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ICGVLLGPSGLNSIKSIVQVETLGEFGVFFTLFLVGLEFSPEKLRKVWKISLQGPCYMTL
310 320 330 340 350 360
370 380 390 400 410
pF1KE6 LMIAFGLLWGHLLRIKPTQSVFISTCLSLSSTPLVSRFLMGSARGDKEGNRTAL
:::::::::::::::::::::::::::::::::::::::::::::::::.
XP_011 LMIAFGLLWGHLLRIKPTQSVFISTCLSLSSTPLVSRFLMGSARGDKEGDIDYSTVLLGM
370 380 390 400 410 420
XP_011 LVTQDVQLGLFMAVMPTLIQAGASASSRSDVLMGSLSKHAETVRTAVDTAPRMCRSRAAH
430 440 450 460 470 480
>>XP_016876118 (OMIM: 617134) PREDICTED: transmembrane a (655 aa)
initn: 2662 init1: 2662 opt: 2662 Z-score: 2128.4 bits: 403.5 E(85289): 8.2e-112
Smith-Waterman score: 2662; 99.8% identity (100.0% similar) in 410 aa overlap (1-410:1-410)
10 20 30 40 50 60
pF1KE6 MKVLGRSFFWVLFPVLPWAVQAVEHEEVAQRVIKLHRGRGVAAMQSRQWVRDSCRKLSGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MKVLGRSFFWVLFPVLPWAVQAVEHEEVAQRVIKLHRGRGVAAMQSRQWVRDSCRKLSGL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 LRQKNAVLNKLKTAIGAVEKDVGLSDEEKLFQVHTFEIFQKELNESENSVFQAVYGLQRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LRQKNAVLNKLKTAIGAVEKDVGLSDEEKLFQVHTFEIFQKELNESENSVFQAVYGLQRA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 LQGDYKDVVNMKESSRQRLEALREAAIKEETEYMELLAAEKHQVEALKNMQHQNQSLSML
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LQGDYKDVVNMKESSRQRLEALREAAIKEETEYMELLAAEKHQVEALKNMQHQNQSLSML
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 DEILEDVRKAADRLEEEIEEHAFDDNKSVKGVNFEAVLRVEEEEANSKQNITKREVEDDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DEILEDVRKAADRLEEEIEEHAFDDNKSVKGVNFEAVLRVEEEEANSKQNITKREVEDDL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE6 GLSMLIDSQNNQYILTKPRDSTIPRADHHFIKDIVTIGMLSLPCGWLCTAIGLPTMFGYI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GLSMLIDSQNNQYILTKPRDSTIPRADHHFIKDIVTIGMLSLPCGWLCTAIGLPTMFGYI
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE6 ICGVLLGPSGLNSIKSIVQVETLGEFGVFFTLFLVGLEFSPEKLRKVWKISLQGPCYMTL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ICGVLLGPSGLNSIKSIVQVETLGEFGVFFTLFLVGLEFSPEKLRKVWKISLQGPCYMTL
310 320 330 340 350 360
370 380 390 400 410
pF1KE6 LMIAFGLLWGHLLRIKPTQSVFISTCLSLSSTPLVSRFLMGSARGDKEGNRTAL
:::::::::::::::::::::::::::::::::::::::::::::::::.
XP_016 LMIAFGLLWGHLLRIKPTQSVFISTCLSLSSTPLVSRFLMGSARGDKEGDIDYSTVLLGM
370 380 390 400 410 420
XP_016 LVTQDVQLGLFMAVMPTLIQAGASASSSIVVEVLRILVLIGQILFSLAAVFLLCLVIKKY
430 440 450 460 470 480
>>XP_011535800 (OMIM: 617134) PREDICTED: transmembrane a (677 aa)
initn: 2662 init1: 2662 opt: 2662 Z-score: 2128.2 bits: 403.5 E(85289): 8.4e-112
Smith-Waterman score: 2662; 99.8% identity (100.0% similar) in 410 aa overlap (1-410:1-410)
10 20 30 40 50 60
pF1KE6 MKVLGRSFFWVLFPVLPWAVQAVEHEEVAQRVIKLHRGRGVAAMQSRQWVRDSCRKLSGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MKVLGRSFFWVLFPVLPWAVQAVEHEEVAQRVIKLHRGRGVAAMQSRQWVRDSCRKLSGL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 LRQKNAVLNKLKTAIGAVEKDVGLSDEEKLFQVHTFEIFQKELNESENSVFQAVYGLQRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LRQKNAVLNKLKTAIGAVEKDVGLSDEEKLFQVHTFEIFQKELNESENSVFQAVYGLQRA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 LQGDYKDVVNMKESSRQRLEALREAAIKEETEYMELLAAEKHQVEALKNMQHQNQSLSML
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LQGDYKDVVNMKESSRQRLEALREAAIKEETEYMELLAAEKHQVEALKNMQHQNQSLSML
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 DEILEDVRKAADRLEEEIEEHAFDDNKSVKGVNFEAVLRVEEEEANSKQNITKREVEDDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DEILEDVRKAADRLEEEIEEHAFDDNKSVKGVNFEAVLRVEEEEANSKQNITKREVEDDL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE6 GLSMLIDSQNNQYILTKPRDSTIPRADHHFIKDIVTIGMLSLPCGWLCTAIGLPTMFGYI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GLSMLIDSQNNQYILTKPRDSTIPRADHHFIKDIVTIGMLSLPCGWLCTAIGLPTMFGYI
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE6 ICGVLLGPSGLNSIKSIVQVETLGEFGVFFTLFLVGLEFSPEKLRKVWKISLQGPCYMTL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ICGVLLGPSGLNSIKSIVQVETLGEFGVFFTLFLVGLEFSPEKLRKVWKISLQGPCYMTL
310 320 330 340 350 360
370 380 390 400 410
pF1KE6 LMIAFGLLWGHLLRIKPTQSVFISTCLSLSSTPLVSRFLMGSARGDKEGNRTAL
:::::::::::::::::::::::::::::::::::::::::::::::::.
XP_011 LMIAFGLLWGHLLRIKPTQSVFISTCLSLSSTPLVSRFLMGSARGDKEGDIDYSTVLLGM
370 380 390 400 410 420
XP_011 LVTQDVQLGLFMAVMPTLIQAGASASSSIVVEVLRILVLIGQILFSLAAVFLLCLVIKKY
430 440 450 460 470 480
>>XP_006720032 (OMIM: 617134) PREDICTED: transmembrane a (677 aa)
initn: 2662 init1: 2662 opt: 2662 Z-score: 2128.2 bits: 403.5 E(85289): 8.4e-112
Smith-Waterman score: 2662; 99.8% identity (100.0% similar) in 410 aa overlap (1-410:1-410)
10 20 30 40 50 60
pF1KE6 MKVLGRSFFWVLFPVLPWAVQAVEHEEVAQRVIKLHRGRGVAAMQSRQWVRDSCRKLSGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MKVLGRSFFWVLFPVLPWAVQAVEHEEVAQRVIKLHRGRGVAAMQSRQWVRDSCRKLSGL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 LRQKNAVLNKLKTAIGAVEKDVGLSDEEKLFQVHTFEIFQKELNESENSVFQAVYGLQRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LRQKNAVLNKLKTAIGAVEKDVGLSDEEKLFQVHTFEIFQKELNESENSVFQAVYGLQRA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 LQGDYKDVVNMKESSRQRLEALREAAIKEETEYMELLAAEKHQVEALKNMQHQNQSLSML
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LQGDYKDVVNMKESSRQRLEALREAAIKEETEYMELLAAEKHQVEALKNMQHQNQSLSML
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 DEILEDVRKAADRLEEEIEEHAFDDNKSVKGVNFEAVLRVEEEEANSKQNITKREVEDDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 DEILEDVRKAADRLEEEIEEHAFDDNKSVKGVNFEAVLRVEEEEANSKQNITKREVEDDL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE6 GLSMLIDSQNNQYILTKPRDSTIPRADHHFIKDIVTIGMLSLPCGWLCTAIGLPTMFGYI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GLSMLIDSQNNQYILTKPRDSTIPRADHHFIKDIVTIGMLSLPCGWLCTAIGLPTMFGYI
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE6 ICGVLLGPSGLNSIKSIVQVETLGEFGVFFTLFLVGLEFSPEKLRKVWKISLQGPCYMTL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 ICGVLLGPSGLNSIKSIVQVETLGEFGVFFTLFLVGLEFSPEKLRKVWKISLQGPCYMTL
310 320 330 340 350 360
370 380 390 400 410
pF1KE6 LMIAFGLLWGHLLRIKPTQSVFISTCLSLSSTPLVSRFLMGSARGDKEGNRTAL
:::::::::::::::::::::::::::::::::::::::::::::::::.
XP_006 LMIAFGLLWGHLLRIKPTQSVFISTCLSLSSTPLVSRFLMGSARGDKEGDIDYSTVLLGM
370 380 390 400 410 420
XP_006 LVTQDVQLGLFMAVMPTLIQAGASASSSIVVEVLRILVLIGQILFSLAAVFLLCLVIKKY
430 440 450 460 470 480
>>NP_060375 (OMIM: 617134) transmembrane and coiled-coil (677 aa)
initn: 2662 init1: 2662 opt: 2662 Z-score: 2128.2 bits: 403.5 E(85289): 8.4e-112
Smith-Waterman score: 2662; 99.8% identity (100.0% similar) in 410 aa overlap (1-410:1-410)
10 20 30 40 50 60
pF1KE6 MKVLGRSFFWVLFPVLPWAVQAVEHEEVAQRVIKLHRGRGVAAMQSRQWVRDSCRKLSGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 MKVLGRSFFWVLFPVLPWAVQAVEHEEVAQRVIKLHRGRGVAAMQSRQWVRDSCRKLSGL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 LRQKNAVLNKLKTAIGAVEKDVGLSDEEKLFQVHTFEIFQKELNESENSVFQAVYGLQRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 LRQKNAVLNKLKTAIGAVEKDVGLSDEEKLFQVHTFEIFQKELNESENSVFQAVYGLQRA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 LQGDYKDVVNMKESSRQRLEALREAAIKEETEYMELLAAEKHQVEALKNMQHQNQSLSML
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 LQGDYKDVVNMKESSRQRLEALREAAIKEETEYMELLAAEKHQVEALKNMQHQNQSLSML
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 DEILEDVRKAADRLEEEIEEHAFDDNKSVKGVNFEAVLRVEEEEANSKQNITKREVEDDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 DEILEDVRKAADRLEEEIEEHAFDDNKSVKGVNFEAVLRVEEEEANSKQNITKREVEDDL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE6 GLSMLIDSQNNQYILTKPRDSTIPRADHHFIKDIVTIGMLSLPCGWLCTAIGLPTMFGYI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 GLSMLIDSQNNQYILTKPRDSTIPRADHHFIKDIVTIGMLSLPCGWLCTAIGLPTMFGYI
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE6 ICGVLLGPSGLNSIKSIVQVETLGEFGVFFTLFLVGLEFSPEKLRKVWKISLQGPCYMTL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 ICGVLLGPSGLNSIKSIVQVETLGEFGVFFTLFLVGLEFSPEKLRKVWKISLQGPCYMTL
310 320 330 340 350 360
370 380 390 400 410
pF1KE6 LMIAFGLLWGHLLRIKPTQSVFISTCLSLSSTPLVSRFLMGSARGDKEGNRTAL
:::::::::::::::::::::::::::::::::::::::::::::::::.
NP_060 LMIAFGLLWGHLLRIKPTQSVFISTCLSLSSTPLVSRFLMGSARGDKEGDIDYSTVLLGM
370 380 390 400 410 420
NP_060 LVTQDVQLGLFMAVMPTLIQAGASASSSIVVEVLRILVLIGQILFSLAAVFLLCLVIKKY
430 440 450 460 470 480
>>XP_011535811 (OMIM: 617134) PREDICTED: transmembrane a (352 aa)
initn: 2236 init1: 2236 opt: 2238 Z-score: 1795.7 bits: 341.0 E(85289): 2.8e-93
Smith-Waterman score: 2238; 98.9% identity (99.1% similar) in 352 aa overlap (1-351:1-352)
10 20 30 40 50 60
pF1KE6 MKVLGRSFFWVLFPVLPWAVQAVEHEEVAQRVIKLHRGRGVAAMQSRQWVRDSCRKLSGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MKVLGRSFFWVLFPVLPWAVQAVEHEEVAQRVIKLHRGRGVAAMQSRQWVRDSCRKLSGL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 LRQKNAVLNKLKTAIGAVEKDVGLSDEEKLFQVHTFEIFQKELNESENSVFQAVYGLQRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LRQKNAVLNKLKTAIGAVEKDVGLSDEEKLFQVHTFEIFQKELNESENSVFQAVYGLQRA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 LQGDYKDVVNMKESSRQRLEALREAAIKEETEYMELLAAEKHQVEALKNMQHQNQSLSML
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LQGDYKDVVNMKESSRQRLEALREAAIKEETEYMELLAAEKHQVEALKNMQHQNQSLSML
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 DEILEDVRKAADRLEEEIEEHAFDDNKSVKGVNFEAVLRVEEEEANSKQNITKREVEDDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DEILEDVRKAADRLEEEIEEHAFDDNKSVKGVNFEAVLRVEEEEANSKQNITKREVEDDL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE6 GLSMLIDSQNNQYILTKPRDSTIPRADHHFIKDIVTIGMLSLPCGWLCTAIGLPTMFGYI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GLSMLIDSQNNQYILTKPRDSTIPRADHHFIKDIVTIGMLSLPCGWLCTAIGLPTMFGYI
250 260 270 280 290 300
310 320 330 340 350
pF1KE6 ICGVLLGPSGLNSIKSIVQVETLGEFGVFFTLFLVGLEFSPEKLRKV-WKISLQGPCYMT
:::::::::::::::::::::::::::::::::::::::::::::: :. :
XP_011 ICGVLLGPSGLNSIKSIVQVETLGEFGVFFTLFLVGLEFSPEKLRKKQWNQS
310 320 330 340 350
360 370 380 390 400 410
pF1KE6 LLMIAFGLLWGHLLRIKPTQSVFISTCLSLSSTPLVSRFLMGSARGDKEGNRTAL
414 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 12:51:16 2016 done: Tue Nov 8 12:51:17 2016
Total Scan time: 7.480 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]