Result of FASTA (ccds) for
pFN21AE6385
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE6385, 340 aa
1>>>pF1KE6385 340 - 340 aa - 340 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.4603+/-0.000862; mu= 15.6842+/- 0.052
mean_var=66.0996+/-13.343, 0's: 0 Z-trim(106.3): 17 B-trim: 0 in 0/51
Lambda= 0.157752
statistics sampled from 8894 (8901) to 8894 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.648), E-opt: 0.2 (0.273), width: 16
Scan time: 2.190
The best scores are: opt bits E(32554)
CCDS1922.1 SFXN5 gene_id:94097|Hs108|chr2 ( 340) 2185 506.0 1.8e-143
CCDS82469.1 SFXN5 gene_id:94097|Hs108|chr2 ( 253) 1368 320.0 1.3e-87
CCDS4394.1 SFXN1 gene_id:94081|Hs108|chr5 ( 322) 783 186.9 1.9e-47
CCDS7508.2 SFXN3 gene_id:81855|Hs108|chr10 ( 325) 776 185.3 5.9e-47
CCDS7539.1 SFXN2 gene_id:118980|Hs108|chr10 ( 322) 761 181.9 6.3e-46
CCDS7610.1 SFXN4 gene_id:119559|Hs108|chr10 ( 337) 414 102.9 3.9e-22
>>CCDS1922.1 SFXN5 gene_id:94097|Hs108|chr2 (340 aa)
initn: 2185 init1: 2185 opt: 2185 Z-score: 2689.2 bits: 506.0 E(32554): 1.8e-143
Smith-Waterman score: 2185; 100.0% identity (100.0% similar) in 340 aa overlap (1-340:1-340)
10 20 30 40 50 60
pF1KE6 MADTATTASAAAASAASASSDAPPFQLGKPRFQQTSFYGRFRHFLDIIDPRTLFVTERRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS19 MADTATTASAAAASAASASSDAPPFQLGKPRFQQTSFYGRFRHFLDIIDPRTLFVTERRL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 REAVQLLEDYKHGTLRPGVTNEQLWSAQKIKQAILHPDTNEKIFMPFRMSGYIPFGTPIV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS19 REAVQLLEDYKHGTLRPGVTNEQLWSAQKIKQAILHPDTNEKIFMPFRMSGYIPFGTPIV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 VGLLLPNQTLASTVFWQWLNQSHNACVNYANRNATKPSPASKFIQGYLGAVISAVSIAVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS19 VGLLLPNQTLASTVFWQWLNQSHNACVNYANRNATKPSPASKFIQGYLGAVISAVSIAVG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 LNVLVQKANKFTPATRLLIQRFVPFPAVASANICNVVLMRYGELEEGIDVLDSDGNLVGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS19 LNVLVQKANKFTPATRLLIQRFVPFPAVASANICNVVLMRYGELEEGIDVLDSDGNLVGS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE6 SKIAARHALLETALTRVVLPMPILVLPPIVMSMLEKTALLQARPRLLLPVQSLVCLAAFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS19 SKIAARHALLETALTRVVLPMPILVLPPIVMSMLEKTALLQARPRLLLPVQSLVCLAAFG
250 260 270 280 290 300
310 320 330 340
pF1KE6 LALPLAISLFPQMSEIETSQLEPEIAQATSSRTVVYNKGL
::::::::::::::::::::::::::::::::::::::::
CCDS19 LALPLAISLFPQMSEIETSQLEPEIAQATSSRTVVYNKGL
310 320 330 340
>>CCDS82469.1 SFXN5 gene_id:94097|Hs108|chr2 (253 aa)
initn: 1368 init1: 1368 opt: 1368 Z-score: 1686.3 bits: 320.0 E(32554): 1.3e-87
Smith-Waterman score: 1368; 100.0% identity (100.0% similar) in 208 aa overlap (1-208:1-208)
10 20 30 40 50 60
pF1KE6 MADTATTASAAAASAASASSDAPPFQLGKPRFQQTSFYGRFRHFLDIIDPRTLFVTERRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 MADTATTASAAAASAASASSDAPPFQLGKPRFQQTSFYGRFRHFLDIIDPRTLFVTERRL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 REAVQLLEDYKHGTLRPGVTNEQLWSAQKIKQAILHPDTNEKIFMPFRMSGYIPFGTPIV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 REAVQLLEDYKHGTLRPGVTNEQLWSAQKIKQAILHPDTNEKIFMPFRMSGYIPFGTPIV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 VGLLLPNQTLASTVFWQWLNQSHNACVNYANRNATKPSPASKFIQGYLGAVISAVSIAVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 VGLLLPNQTLASTVFWQWLNQSHNACVNYANRNATKPSPASKFIQGYLGAVISAVSIAVG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 LNVLVQKANKFTPATRLLIQRFVPFPAVASANICNVVLMRYGELEEGIDVLDSDGNLVGS
::::::::::::::::::::::::::::
CCDS82 LNVLVQKANKFTPATRLLIQRFVPFPAVGRLSCRHAPGCSSLCKASCAWQPSAWPCRWPS
190 200 210 220 230 240
>>CCDS4394.1 SFXN1 gene_id:94081|Hs108|chr5 (322 aa)
initn: 818 init1: 439 opt: 783 Z-score: 965.1 bits: 186.9 E(32554): 1.9e-47
Smith-Waterman score: 785; 39.1% identity (71.5% similar) in 330 aa overlap (19-340:2-322)
10 20 30 40 50
pF1KE6 MADTATTASAAAASAASASSDAPP-FQLGKPRFQQTSFYGRFRHFLDIIDPRTLFVTERR
:.. :: ... .::..:..: :: ::. . :::....:...
CCDS43 MSGELPPNINIKEPRWDQSTFIGRANHFFTVTDPRNILLTNEQ
10 20 30 40
60 70 80 90 100 110
pF1KE6 LREAVQLLEDYKHGTLRPGVTNEQLWSAQKIKQAILHPDTNEKIFMPFRMSGYIPFGTPI
:. : ....::..: . ::.:...:: :. : .. .::::.::... :::. .:.. :
CCDS43 LESARKIVHDYRQGIVPPGLTENELWRAKYIYDSAFHPDTGEKMILIGRMSAQVPMNMTI
50 60 70 80 90 100
120 130 140 150 160 170
pF1KE6 VVGLLLPNQTLASTVFWQWLNQSHNACVNYANRNATKPSPASKFIQGYLGAVISAVSIAV
. .. .: ...::::.::: :: :::.::.. : .... .:..:. .::. :.
CCDS43 TGCMMTFYRTTPAVLFWQWINQSFNAVVNYTNRSGDAPLTVNELGTAYVSATTGAVATAL
110 120 130 140 150 160
180 190 200 210 220 230
pF1KE6 GLNVLVQKANKFTPATRLLIQRFVPFPAVASANICNVVLMRYGELEEGIDVLDSDGNLVG
:::.:.... .: :: ::::: :::.:: :. ::: ::. :: : : .:: .:
CCDS43 GLNALTKHV---SP----LIGRFVPFAAVAAANCINIPLMRQRELKVGIPVTDENGNRLG
170 180 190 200 210
240 250 260 270 280 290
pF1KE6 SSKIAARHALLETALTRVVLPMPILVLPPIVMSMLEKTALLQARPRLLLPVQSLVCLAAF
: ::..:. .....:... : ...::..:. ::: :.:. : . :.: : :..:
CCDS43 ESANAAKQAITQVVVSRILMAAPGMAIPPFIMNTLEKKAFLKRFPWMSAPIQ--VGLVGF
220 230 240 250 260 270
300 310 320 330 340
pF1KE6 GL--ALPLAISLFPQMSEIETSQLEPEI-AQATSS----RTVVYNKGL
: : :: .:::: : . ...:: :. :. : : : .::::
CCDS43 CLVFATPLCCALFPQKSSMSVTSLEAELQAKIQESHPELRRVYFNKGL
280 290 300 310 320
>>CCDS7508.2 SFXN3 gene_id:81855|Hs108|chr10 (325 aa)
initn: 802 init1: 431 opt: 776 Z-score: 956.4 bits: 185.3 E(32554): 5.9e-47
Smith-Waterman score: 778; 39.8% identity (69.3% similar) in 319 aa overlap (29-340:16-325)
10 20 30 40 50 60
pF1KE6 MADTATTASAAAASAASASSDAPPFQLGKPRFQQTSFYGRFRHFLDIIDPRTLFVTERRL
.::..:..: :: :::. . :::.:... .:
CCDS75 MESKMGELPLDINIQEPRWDQSTFLGRARHFFTVTDPRNLLLSGAQL
10 20 30 40
70 80 90 100 110 120
pF1KE6 REAVQLLEDYKHGTLRPGVTNEQLWSAQKIKQAILHPDTNEKIFMPFRMSGYIPFGTPIV
. . .....:. :.. ::.:..::: :. . .. .::::.::. . :::. .:.. :.
CCDS75 EASRNIVQNYRAGVVTPGITEDQLWRAKYVYDSAFHPDTGEKVVLIGRMSAQVPMNMTIT
50 60 70 80 90 100
130 140 150 160 170 180
pF1KE6 VGLLLPNQTLASTVFWQWLNQSHNACVNYANRNATKPSPASKFIQGYLGAVISAVSIAVG
.: . ..:::::.::: :: :::.::.. : . .. .:..:. .::. :.:
CCDS75 GCMLTFYRKTPTVVFWQWVNQSFNAIVNYSNRSGDTPITVRQLGTAYVSATTGAVATALG
110 120 130 140 150 160
190 200 210 220 230 240
pF1KE6 LNVLVQKANKFTPATRLLIQRFVPFPAVASANICNVVLMRYGELEEGIDVLDSDGNLVGS
:. : .: : :. ::::: :::.:: :. ::: ::. :: : : :. .:
CCDS75 LKSL----TKHLPP---LVGRFVPFAAVAAANCINIPLMRQRELQVGIPVADEAGQRLGY
170 180 190 200 210 220
250 260 270 280 290 300
pF1KE6 SKIAARHALLETALTRVVLPMPILVLPPIVMSMLEKTALLQARPRLLLPVQSLVCLAAFG
: ::..........:. . .: ...::..:. ::: .:. :: : :.: : :..:
CCDS75 SVTAAKQGIFQVVISRICMAIPAMAIPPLIMDTLEKKDFLKRRPWLGAPLQ--VGLVGFC
230 240 250 260 270
310 320 330 340
pF1KE6 L--ALPLAISLFPQMSEIETSQLEPEI-----AQATSSRTVVYNKGL
: : :: .:::: : :. :.::::. : : ..: :::::
CCDS75 LVFATPLCCALFPQKSSIHISNLEPELRAQIHEQNPSVEVVYYNKGL
280 290 300 310 320
>>CCDS7539.1 SFXN2 gene_id:118980|Hs108|chr10 (322 aa)
initn: 756 init1: 474 opt: 761 Z-score: 938.1 bits: 181.9 E(32554): 6.3e-46
Smith-Waterman score: 761; 39.1% identity (67.6% similar) in 330 aa overlap (20-340:3-322)
10 20 30 40 50 60
pF1KE6 MADTATTASAAAASAASASSDAPPFQLGKPRFQQTSFYGRFRHFLDIIDPRTLFVTERRL
.: :.. ::..: .: :: .:::.: ::::.::.::.:
CCDS75 MEADLSGFNIDAPRWDQRTFLGRVKHFLNITDPRTVFVSEREL
10 20 30 40
70 80 90 100 110 120
pF1KE6 REAVQLLEDYKHGTLRPGVTNEQLWSAQKIKQAILHPDTNEKIFMPFRMSGYIPFGTPIV
: ..: . :.. ::. ::: :.:. .. .::::.::. . ::: .: : :.
CCDS75 DWAKVMVEKSRMGVVPPGTQVEQLLYAKKLYDSAFHPDTGEKMNVIGRMSFQLP-GGMII
50 60 70 80 90 100
130 140 150 160 170
pF1KE6 VGLLLP-NQTLASTVFWQWLNQSHNACVNYANRNATKPSPASKFIQGYLGAVISAVSIAV
.:..: .:. ...::::.::: :: :::.::::..:. . .. .:. :. .::. ::
CCDS75 TGFMLQFYRTMPAVIFWQWVNQSFNALVNYTNRNAASPTSVRQMALSYFTATTTAVATAV
110 120 130 140 150 160
180 190 200 210 220 230
pF1KE6 GLNVLVQKANKFTPATRLLIQRFVPFPAVASANICNVVLMRYGELEEGIDVLDSDGNLVG
:.:.:..:: : :. :.::: :::.:: :. .:: :: .:: : : . : .:
CCDS75 GMNMLTKKA----PP---LVGRWVPFAAVAAANCVNIPMMRQQELIKGICVKDRNENEIG
170 180 190 200 210
240 250 260 270 280 290
pF1KE6 SSKIAARHALLETALTRVVLPMPILVLPPIVMSMLEKTALLQARPRLLLPVQSLV--CLA
:. :: .. .....:... : ..: :..: ::: ..: : :.: .. :.
CCDS75 HSRRAAAIGITQVVISRITMSAPGMILLPVIMERLEKLHFMQKVKVLHAPLQVMLSGCFL
220 230 240 250 260 270
300 310 320 330 340
pF1KE6 AFGLALPLAISLFPQMSEIETSQLEPEIAQATSSRT------VVYNKGL
: .:.: .:::: :. .: :::.. .. ... : .::::
CCDS75 IF--MVPVACGLFPQKCELPVSYLEPKLQDTIKAKYGELEPYVYFNKGL
280 290 300 310 320
>>CCDS7610.1 SFXN4 gene_id:119559|Hs108|chr10 (337 aa)
initn: 399 init1: 230 opt: 414 Z-score: 510.9 bits: 102.9 E(32554): 3.9e-22
Smith-Waterman score: 414; 28.4% identity (60.1% similar) in 328 aa overlap (21-340:19-337)
10 20 30 40 50
pF1KE6 MADTATTASAAAASAASASSDA-PPFQLGKPRF---QQTSFYGRFRHFLDIIDPRTLFVT
:: : : . :: .. :: :: .. ...:: ..:..
CCDS76 MSLEQEEETQPGRLLGRRDAVPAFIEPNVRFWITERQSFIRRFLQWTELLDPTNVFIS
10 20 30 40 50
60 70 80 90 100 110
pF1KE6 ERRLREAVQLLEDYKHGTLRPGVTNEQLWSAQKIKQAILHPDTNEKIFMPFRMSGYIPFG
. .... ::: .. . :. ..... : : . : .:::... : :: ....::
CCDS76 VESIENSRQLLCT-NEDVSSPASADQRIQEAWKRSLATVHPDSSNLIPKLFRPAAFLPFM
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE6 TPIVVGLLLPNQTLASTVFWQWLNQSHNACVNYANRNAT---KPSPASKFIQGYLGAVIS
.: : . : . . :... : . .. : : : : . :: : .. : :: :
CCDS76 APTVFLSMTPLKGIKSVILPQVFLCAYMAAFNSINGNRSYTCKPLERSLLMAG---AVAS
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE6 AVSIAVGLNVLVQKANKFTPATRLLIQRFVPFPAVASANICNVVLMRYGELEEGIDVLDS
.. ..: . .:: .: :.:..: ...:. :: . : : .:: :.:.
CCDS76 STFLGV-IPQFVQMKYGLTGP---WIKRLLPVIFLVQASGMNVYMSRSLESIKGIAVMDK
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE6 DGNLVGSSKIAARHALLETALTRVVLPMPILVLPPIVMSMLEKTALLQARPRLLLPVQSL
.::..: :.::. .:. :: .:.:: ..: . ....: .. : : . .:
CCDS76 EGNVLGHSRIAGTKAVRETLASRIVLFGTSALIPEVFTYFFKRTQYFRKNPGSLW-ILKL
240 250 260 270 280
300 310 320 330 340
pF1KE6 VCLA-AFGLALPLAISLFPQMSEIETSQLEPEIAQATSSRTVVYNKGL
: . :.:: .:...:.:::...:. .:: .: . : . :..:.
CCDS76 SCTVLAMGLMVPFSFSIFPQIGQIQYCSLEEKIQSPTEETEIFYHRGV
290 300 310 320 330
340 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 12:47:47 2016 done: Tue Nov 8 12:47:48 2016
Total Scan time: 2.190 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]