Result of FASTA (ccds) for
pFN21AE6381
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE6381, 319 aa
1>>>pF1KE6381 319 - 319 aa - 319 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.4670+/-0.00118; mu= 14.5659+/- 0.070
mean_var=68.7154+/-15.026, 0's: 0 Z-trim(102.1): 35 B-trim: 446 in 1/47
Lambda= 0.154720
statistics sampled from 6783 (6810) to 6783 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.566), E-opt: 0.2 (0.209), width: 16
Scan time: 1.690
The best scores are: opt bits E(32554)
CCDS55624.1 SLC16A4 gene_id:9122|Hs108|chr1 ( 319) 2126 484.0 6.7e-137
CCDS823.1 SLC16A4 gene_id:9122|Hs108|chr1 ( 487) 1172 271.1 1.2e-72
CCDS55622.1 SLC16A4 gene_id:9122|Hs108|chr1 ( 425) 979 228.0 1e-59
CCDS55623.1 SLC16A4 gene_id:9122|Hs108|chr1 ( 439) 979 228.0 1e-59
CCDS55621.1 SLC16A4 gene_id:9122|Hs108|chr1 ( 382) 691 163.7 2.1e-40
CCDS7404.2 SLC16A12 gene_id:387700|Hs108|chr10 ( 516) 425 104.4 2e-22
CCDS11085.1 SLC16A13 gene_id:201232|Hs108|chr17 ( 426) 408 100.6 2.3e-21
CCDS2473.1 SLC16A14 gene_id:151473|Hs108|chr2 ( 510) 380 94.4 2.1e-19
CCDS11675.1 SLC16A6 gene_id:9120|Hs108|chr17 ( 523) 367 91.5 1.6e-18
CCDS8961.1 SLC16A7 gene_id:9194|Hs108|chr12 ( 478) 353 88.3 1.3e-17
CCDS7256.1 SLC16A9 gene_id:220963|Hs108|chr10 ( 509) 337 84.8 1.6e-16
CCDS13966.1 SLC16A8 gene_id:23539|Hs108|chr22 ( 504) 328 82.8 6.4e-16
CCDS858.1 SLC16A1 gene_id:6566|Hs108|chr1 ( 500) 322 81.4 1.6e-15
CCDS11086.1 SLC16A11 gene_id:162515|Hs108|chr17 ( 471) 319 80.7 2.4e-15
CCDS11713.1 SLC16A5 gene_id:9121|Hs108|chr17 ( 505) 318 80.5 3e-15
CCDS11804.1 SLC16A3 gene_id:9123|Hs108|chr17 ( 465) 312 79.2 7.1e-15
CCDS5089.1 SLC16A10 gene_id:117247|Hs108|chr6 ( 515) 309 78.5 1.2e-14
CCDS14426.2 SLC16A2 gene_id:6567|Hs108|chrX ( 539) 271 70.0 4.6e-12
>>CCDS55624.1 SLC16A4 gene_id:9122|Hs108|chr1 (319 aa)
initn: 2126 init1: 2126 opt: 2126 Z-score: 2571.3 bits: 484.0 E(32554): 6.7e-137
Smith-Waterman score: 2126; 100.0% identity (100.0% similar) in 319 aa overlap (1-319:1-319)
10 20 30 40 50 60
pF1KE6 MLKREGKVQPYTKTLDGGWGWMIVIHFFLVNVFVMGMTKTFAIFFVVFQEEFEGTSEQIG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 MLKREGKVQPYTKTLDGGWGWMIVIHFFLVNVFVMGMTKTFAIFFVVFQEEFEGTSEQIG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 WIGSIMSSLRFCAGPLVAIICDILGEKTTSILGAFVVTGGYLISSWATSIPFLCVTMGLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 WIGSIMSSLRFCAGPLVAIICDILGEKTTSILGAFVVTGGYLISSWATSIPFLCVTMGLL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 PGLGSAFLYQVAAVVTTKYFKKRLALSTAIARSGMGLTFLLAPFTKFLIDLYDWTGILET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 PGLGSAFLYQVAAVVTTKYFKKRLALSTAIARSGMGLTFLLAPFTKFLIDLYDWTGILET
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 VSQIISGWVADQNWIKKYHYHKSYLILCGITNLLAPLATTFPLLMTYTICFAIFAGGYLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 VSQIISGWVADQNWIKKYHYHKSYLILCGITNLLAPLATTFPLLMTYTICFAIFAGGYLA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE6 LILPVLVDLCRNSTVNRFLGLASFFAGMAVLSGPPIAGWLYDYTQTYNGSFYFSGICYLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 LILPVLVDLCRNSTVNRFLGLASFFAGMAVLSGPPIAGWLYDYTQTYNGSFYFSGICYLL
250 260 270 280 290 300
310
pF1KE6 SSVSFFFVPLAERWKNSLT
:::::::::::::::::::
CCDS55 SSVSFFFVPLAERWKNSLT
310
>>CCDS823.1 SLC16A4 gene_id:9122|Hs108|chr1 (487 aa)
initn: 1193 init1: 1167 opt: 1172 Z-score: 1417.7 bits: 271.1 E(32554): 1.2e-72
Smith-Waterman score: 1172; 90.5% identity (93.5% similar) in 199 aa overlap (1-199:1-199)
10 20 30 40 50 60
pF1KE6 MLKREGKVQPYTKTLDGGWGWMIVIHFFLVNVFVMGMTKTFAIFFVVFQEEFEGTSEQIG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 MLKREGKVQPYTKTLDGGWGWMIVIHFFLVNVFVMGMTKTFAIFFVVFQEEFEGTSEQIG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 WIGSIMSSLRFCAGPLVAIICDILGEKTTSILGAFVVTGGYLISSWATSIPFLCVTMGLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 WIGSIMSSLRFCAGPLVAIICDILGEKTTSILGAFVVTGGYLISSWATSIPFLCVTMGLL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 PGLGSAFLYQVAAVVTTKYFKKRLALSTAIARSGMGLTFLLAPFTKFLIDLYDWTGILET
:::::::::::::::::::::::::::::::::::::::::::::::::::::::: :
CCDS82 PGLGSAFLYQVAAVVTTKYFKKRLALSTAIARSGMGLTFLLAPFTKFLIDLYDWTGALIL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 VSQIISGWVADQNWIKKYHYHKSYLILCGITNLLAPLATTFPLLMTYTICFAIFAGGYLA
. : . : .. .. :
CCDS82 FGAIALNLVPSSMLLRPIHIKSENNSGIKDKGSSLSAHGPEAHATETHCHETEESTIKDS
190 200 210 220 230 240
>--
initn: 972 init1: 972 opt: 979 Z-score: 1184.8 bits: 228.1 E(32554): 1.1e-59
Smith-Waterman score: 979; 89.9% identity (92.9% similar) in 169 aa overlap (158-319:319-487)
130 140 150 160 170 180
pF1KE6 LYQVAAVVTTKYFKKRLALSTAIARSGMGLTFLLAPFTKFL-IDLYDWT------GILET
:: :. .: : ::..: . :::::
CCDS82 QLFDISLFRNPFFYIFTWSFLLSQLAYFIPTFHLVARAKTLGIDIMDASYLVSVAGILET
290 300 310 320 330 340
190 200 210 220 230 240
pF1KE6 VSQIISGWVADQNWIKKYHYHKSYLILCGITNLLAPLATTFPLLMTYTICFAIFAGGYLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 VSQIISGWVADQNWIKKYHYHKSYLILCGITNLLAPLATTFPLLMTYTICFAIFAGGYLA
350 360 370 380 390 400
250 260 270 280 290 300
pF1KE6 LILPVLVDLCRNSTVNRFLGLASFFAGMAVLSGPPIAGWLYDYTQTYNGSFYFSGICYLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 LILPVLVDLCRNSTVNRFLGLASFFAGMAVLSGPPIAGWLYDYTQTYNGSFYFSGICYLL
410 420 430 440 450 460
310
pF1KE6 SSVSFFFVPLAERWKNSLT
:::::::::::::::::::
CCDS82 SSVSFFFVPLAERWKNSLT
470 480
>>CCDS55622.1 SLC16A4 gene_id:9122|Hs108|chr1 (425 aa)
initn: 972 init1: 972 opt: 979 Z-score: 1185.7 bits: 228.0 E(32554): 1e-59
Smith-Waterman score: 979; 89.9% identity (92.9% similar) in 169 aa overlap (158-319:257-425)
130 140 150 160 170 180
pF1KE6 LYQVAAVVTTKYFKKRLALSTAIARSGMGLTFLLAPFTKFL-IDLYDWT------GILET
:: :. .: : ::..: . :::::
CCDS55 QLFDISLFRNPFFYIFTWSFLLSQLAYFIPTFHLVARAKTLGIDIMDASYLVSVAGILET
230 240 250 260 270 280
190 200 210 220 230 240
pF1KE6 VSQIISGWVADQNWIKKYHYHKSYLILCGITNLLAPLATTFPLLMTYTICFAIFAGGYLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 VSQIISGWVADQNWIKKYHYHKSYLILCGITNLLAPLATTFPLLMTYTICFAIFAGGYLA
290 300 310 320 330 340
250 260 270 280 290 300
pF1KE6 LILPVLVDLCRNSTVNRFLGLASFFAGMAVLSGPPIAGWLYDYTQTYNGSFYFSGICYLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 LILPVLVDLCRNSTVNRFLGLASFFAGMAVLSGPPIAGWLYDYTQTYNGSFYFSGICYLL
350 360 370 380 390 400
310
pF1KE6 SSVSFFFVPLAERWKNSLT
:::::::::::::::::::
CCDS55 SSVSFFFVPLAERWKNSLT
410 420
>--
initn: 715 init1: 666 opt: 676 Z-score: 820.2 bits: 160.4 E(32554): 2.3e-39
Smith-Waterman score: 676; 83.7% identity (88.4% similar) in 129 aa overlap (71-199:9-137)
50 60 70 80 90 100
pF1KE6 FAIFFVVFQEEFEGTSEQIGWIGSIMSSLRFCAGPLVAIICDILGEKTTSILGAFVVTGG
: :::::::::::::::::::::::::::
CCDS55 MGMDDCDSFFPGPLVAIICDILGEKTTSILGAFVVTGG
10 20 30
110 120 130 140 150 160
pF1KE6 YLISSWATSIPFLCVTMGLLPGLGSAFLYQVAAVVTTKYFKKRLALSTAIARSGMGLTFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 YLISSWATSIPFLCVTMGLLPGLGSAFLYQVAAVVTTKYFKKRLALSTAIARSGMGLTFL
40 50 60 70 80 90
170 180 190 200 210 220
pF1KE6 LAPFTKFLIDLYDWTGILETVSQIISGWVADQNWIKKYHYHKSYLILCGITNLLAPLATT
:::::::::::::::: : . : . : .. .. :
CCDS55 LAPFTKFLIDLYDWTGALILFGAIALNLVPSSMLLRPIHIKSENNSGIKDKGSSLSAHGP
100 110 120 130 140 150
230 240 250 260 270 280
pF1KE6 FPLLMTYTICFAIFAGGYLALILPVLVDLCRNSTVNRFLGLASFFAGMAVLSGPPIAGWL
CCDS55 EAHATETHCHETEESTIKDSTTQKAGLPSKNLTVSQNQSEEFYNGPNRNRLLLKSDEESD
160 170 180 190 200 210
>>CCDS55623.1 SLC16A4 gene_id:9122|Hs108|chr1 (439 aa)
initn: 1467 init1: 972 opt: 979 Z-score: 1185.5 bits: 228.0 E(32554): 1e-59
Smith-Waterman score: 979; 89.9% identity (92.9% similar) in 169 aa overlap (158-319:271-439)
130 140 150 160 170 180
pF1KE6 LYQVAAVVTTKYFKKRLALSTAIARSGMGLTFLLAPFTKFL-IDLYDWT------GILET
:: :. .: : ::..: . :::::
CCDS55 QLFDISLFRNPFFYIFTWSFLLSQLAYFIPTFHLVARAKTLGIDIMDASYLVSVAGILET
250 260 270 280 290 300
190 200 210 220 230 240
pF1KE6 VSQIISGWVADQNWIKKYHYHKSYLILCGITNLLAPLATTFPLLMTYTICFAIFAGGYLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 VSQIISGWVADQNWIKKYHYHKSYLILCGITNLLAPLATTFPLLMTYTICFAIFAGGYLA
310 320 330 340 350 360
250 260 270 280 290 300
pF1KE6 LILPVLVDLCRNSTVNRFLGLASFFAGMAVLSGPPIAGWLYDYTQTYNGSFYFSGICYLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 LILPVLVDLCRNSTVNRFLGLASFFAGMAVLSGPPIAGWLYDYTQTYNGSFYFSGICYLL
370 380 390 400 410 420
310
pF1KE6 SSVSFFFVPLAERWKNSLT
:::::::::::::::::::
CCDS55 SSVSFFFVPLAERWKNSLT
430
>--
initn: 895 init1: 509 opt: 513 Z-score: 623.4 bits: 124.0 E(32554): 2.1e-28
Smith-Waterman score: 751; 66.3% identity (69.3% similar) in 199 aa overlap (1-199:1-151)
10 20 30 40 50 60
pF1KE6 MLKREGKVQPYTKTLDGGWGWMIVIHFFLVNVFVMGMTKTFAIFFVVFQEEFEGTSEQIG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 MLKREGKVQPYTKTLDGGWGWMIVIHFFLVNVFVMGMTKTFAIFFVVFQEEFEGTSEQIG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 WIGSIMSSLRFCAGPLVAIICDILGEKTTSILGAFVVTGGYLISSWATSIPFLCVTMGLL
::::::::::::::
CCDS55 WIGSIMSSLRFCAG----------------------------------------------
70
130 140 150 160 170 180
pF1KE6 PGLGSAFLYQVAAVVTTKYFKKRLALSTAIARSGMGLTFLLAPFTKFLIDLYDWTGILET
:::::::::::::::::::::::::::::::::::::::::::::::::::::: :
CCDS55 --LGSAFLYQVAAVVTTKYFKKRLALSTAIARSGMGLTFLLAPFTKFLIDLYDWTGALIL
80 90 100 110 120 130
190 200 210 220 230 240
pF1KE6 VSQIISGWVADQNWIKKYHYHKSYLILCGITNLLAPLATTFPLLMTYTICFAIFAGGYLA
. : . : .. .. :
CCDS55 FGAIALNLVPSSMLLRPIHIKSENNSGIKDKGSSLSAHGPEAHATETHCHETEESTIKDS
140 150 160 170 180 190
>>CCDS55621.1 SLC16A4 gene_id:9122|Hs108|chr1 (382 aa)
initn: 677 init1: 677 opt: 691 Z-score: 839.0 bits: 163.7 E(32554): 2.1e-40
Smith-Waterman score: 691; 72.0% identity (82.3% similar) in 164 aa overlap (158-308:209-372)
130 140 150 160 170 180
pF1KE6 LYQVAAVVTTKYFKKRLALSTAIARSGMGLTFLLAPFTKFL-IDLYDWT------GILET
:: :. .: : ::..: . :::::
CCDS55 QLFDISLFRNPFFYIFTWSFLLSQLAYFIPTFHLVARAKTLGIDIMDASYLVSVAGILET
180 190 200 210 220 230
190 200 210 220 230 240
pF1KE6 VSQIISGWVADQNWIKKYHYHKSYLILCGITNLLAPLATTFPLLMTYTICFAIFAGGYLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 VSQIISGWVADQNWIKKYHYHKSYLILCGITNLLAPLATTFPLLMTYTICFAIFAGGYLA
240 250 260 270 280 290
250 260 270 280 290
pF1KE6 LILPVLVDLCRNSTVNRFLGLASFFAGMAVLSGPPIAGWLYDYTQTY----NGSFYFS-G
::::::::::::::::::::::::::::::::::::: . .. : .. .: .
CCDS55 LILPVLVDLCRNSTVNRFLGLASFFAGMAVLSGPPIAEIIPSFQAGYMIIPRHTMALSTS
300 310 320 330 340 350
300 310
pF1KE6 ICYLLSSVSF-FFVPLAERWKNSLT
. : .::..: ::.
CCDS55 LAYAISSLQFPFFLYHWPKDGKTV
360 370 380
>--
initn: 423 init1: 361 opt: 368 Z-score: 449.4 bits: 91.6 E(32554): 1e-18
Smith-Waterman score: 368; 74.1% identity (84.0% similar) in 81 aa overlap (119-199:9-89)
90 100 110 120 130 140
pF1KE6 TSILGAFVVTGGYLISSWATSIPFLCVTMGLLPGLGSAFLYQVAAVVTTKYFKKRLALST
..::::::::::::::::::::::::::::
CCDS55 MGMDDCDSFFPGLGSAFLYQVAAVVTTKYFKKRLALST
10 20 30
150 160 170 180 190 200
pF1KE6 AIARSGMGLTFLLAPFTKFLIDLYDWTGILETVSQIISGWVADQNWIKKYHYHKSYLILC
:::::::::::::::::::::::::::: : . : . : .. .. :
CCDS55 AIARSGMGLTFLLAPFTKFLIDLYDWTGALILFGAIALNLVPSSMLLRPIHIKSENNSGI
40 50 60 70 80 90
210 220 230 240 250 260
pF1KE6 GITNLLAPLATTFPLLMTYTICFAIFAGGYLALILPVLVDLCRNSTVNRFLGLASFFAGM
CCDS55 KDKGSSLSAHGPEAHATETHCHETEESTIKDSTTQKAGLPSKNLTVSQNQSEEFYNGPNR
100 110 120 130 140 150
>>CCDS7404.2 SLC16A12 gene_id:387700|Hs108|chr10 (516 aa)
initn: 603 init1: 359 opt: 425 Z-score: 516.1 bits: 104.4 E(32554): 2e-22
Smith-Waterman score: 425; 40.0% identity (70.9% similar) in 175 aa overlap (16-189:44-214)
10 20 30 40
pF1KE6 MLKREGKVQPYTKTLDGGWGWMIVIHFFLVNVFVMGMTKTFAIFF
::::::::: :::.. . ..:. ..:::
CCDS74 IITWLLEQPGKEEKRKTMAKVNRARSTSPPDGGWGWMIVAGCFLVTICTRAVTRCISIFF
20 30 40 50 60 70
50 60 70 80 90 100
pF1KE6 VVFQEEFEGTSEQIGWIGSIMSSLRFCAGPLVAIICDILGEKTTSILGAFVVTGGYLISS
: :: : : .:: ::.. . . .:: ... . :. .. .::..... : ..::
CCDS74 VEFQTYFTQDYAQTAWIHSIVDCVTMLCAPLGSVVSNHLSCQVGIMLGGLLASTGLILSS
80 90 100 110 120 130
110 120 130 140 150 160
pF1KE6 WATSIPFLCVTMGLLPGLGSAFLYQVAAVVTTKYFKKRLALSTAIARSGMGL-TFLLAPF
.:::. : .:.:.: ::: :. :. : ... :::..: ::. .:: :: :. ::.:::
CCDS74 FATSLKHLYLTLGVLTGLGFALCYSPAIAMVGKYFSRRKALAYGIAMSGSGIGTFILAPV
140 150 160 170 180 190
170 180 190 200 210 220
pF1KE6 TKFLIDLYDWTGILETVSQIISGWVADQNWIKKYHYHKSYLILCGITNLLAPLATTFPLL
...::. ..: : : :..:.:
CCDS74 VQLLIEQFSWRGAL----LILGGFVLNLCVCGALMRPITLKEDHTTPEQNHVCRTQKEDI
200 210 220 230 240
>>CCDS11085.1 SLC16A13 gene_id:201232|Hs108|chr17 (426 aa)
initn: 547 init1: 318 opt: 408 Z-score: 496.9 bits: 100.6 E(32554): 2.3e-21
Smith-Waterman score: 408; 30.2% identity (60.4% similar) in 275 aa overlap (12-282:5-274)
10 20 30 40 50 60
pF1KE6 MLKREGKVQPYTKTLDGGWGWMIVIHFFLVNVFVMGMTKTFAIFFVVFQEEFEGTSEQIG
:. ::::::..:. :. ...:.:. ..:..::: : :: . ...
CCDS11 MARRTEPPDGGWGWVVVLSAFFQSALVFGVLRSFGVFFVEFVAAFEEQAARVS
10 20 30 40 50
70 80 90 100 110 120
pF1KE6 WIGSIMSSLRFCAGPLVAIICDILGEKTTSILGAFVVTGGYLISSWATSIPFLCVTMGLL
::.:: ... ..:. . . .: . . . :..... :.:..:.:::. : ...:::
CCDS11 WIASIGIAVQQFGSPVGSALSTKFGPRPVVMTGGILAALGMLLASFATSLTHLYLSIGLL
60 70 80 90 100 110
130 140 150 160 170
pF1KE6 PGLGSAFLYQVAAVVTTKYFKKRLALSTAIARSGMGLT-FLLAPFTKFLIDLYDWTGILE
: : :. . . . . ::..: .:.:..: .:.::. : .::: ..:.. : : : :
CCDS11 SGSGWALTFAPTLACLSCYFSRRRSLATGLALTGVGLSSFTFAPFFQWLLSHYAWRGSLL
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE6 TVSQIISGWVADQNWIKKYHYHKSYLILCGITNLLAPLATTFPLLMTYTICFAIFAGGYL
:: . :: .. .. . : :. : :.: ::. .... ::.
CCDS11 LVSALSLHLVACGALLRPPSLAEDPAV-GGPRAQLTSLLHHGPFL-RYTVALTLINTGYF
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE6 ALILPV---LVDLCRNSTVNRFLGLASFFAGMAVLSGPPIAGWLYDYTQTYNGSFYFSGI
: . : :: . : : : : .. : : ..::: :
CCDS11 IPYLHLVAHLQDLDWDPLPAAF--LLSVVA-ISDLVGRVVSGWLGDAVPGPVTRLLMLWT
240 250 260 270 280
300 310
pF1KE6 CYLLSSVSFFFVPLAERWKNSLT
CCDS11 TLTGVSLALFPVAQAPTALVALAVAYGFTSGALAPLAFSVLPELIGTRRIYCGLGLLQMI
290 300 310 320 330 340
>>CCDS2473.1 SLC16A14 gene_id:151473|Hs108|chr2 (510 aa)
initn: 534 init1: 341 opt: 380 Z-score: 461.9 bits: 94.4 E(32554): 2.1e-19
Smith-Waterman score: 380; 30.5% identity (71.8% similar) in 177 aa overlap (3-178:17-192)
10 20 30 40
pF1KE6 MLKREGKVQPYTKTLDGGWGWMIVIHFFLVNVFVMGMTKTFAIFFV
: . ..:. . .::::.::.:. :.:....:: ..... :
CCDS24 MYTSHEDIGYDFEDGPKDKKTLKPHPN-IDGGWAWMMVLSSFFVHILIMGSQMALGVLNV
10 20 30 40 50
50 60 70 80 90 100
pF1KE6 VFQEEFEGTSEQIGWIGSIMSSLRFCAGPLVAIICDILGEKTTSILGAFVVTGGYLISSW
. :::. . .:..:. .. . .::..... . : . :.:.:..: . :...:..
CCDS24 EWLEEFHQSRGLTAWVSSLSMGITLIVGPFIGLFINTCGCRQTAIIGGLVNSLGWVLSAY
60 70 80 90 100 110
110 120 130 140 150 160
pF1KE6 ATSIPFLCVTMGLLPGLGSAFLYQVAAVVTTKYFKKRLALSTAIARSGMGL-TFLLAPFT
:... .: .:.:. ::::.. : :.:.. .::.:: ::. ... .: :. :::.. .
CCDS24 AANVHYLFITFGVAAGLGSGMAYLPAVVMVGRYFQKRRALAQGLSTTGTGFGTFLMTVLL
120 130 140 150 160 170
170 180 190 200 210 220
pF1KE6 KFLIDLYDWTGILETVSQIISGWVADQNWIKKYHYHKSYLILCGITNLLAPLATTFPLLM
:.: : : . .
CCDS24 KYLCAEYGWRNAMLIQGAVSLNLCVCGALMRPLSPGKNPNDPGEKDVRGLPAHSTESVKS
180 190 200 210 220 230
>>CCDS11675.1 SLC16A6 gene_id:9120|Hs108|chr17 (523 aa)
initn: 465 init1: 356 opt: 367 Z-score: 446.1 bits: 91.5 E(32554): 1.6e-18
Smith-Waterman score: 367; 31.6% identity (69.5% similar) in 174 aa overlap (2-174:6-179)
10 20 30 40 50
pF1KE6 MLKREGKVQPYTKTLDGGWGWMIVIHFFLVNVFVMGMTKTFAIFFVVFQEEFEGTS
:: .:.. ::.. :::::: ... ::.:.::..:. :::..:: ... :. ..
CCDS11 MTQNKLKLCSKANVYTEVPDGGWGWAVAVSFFFVEVFTYGIIKTFGVFFNDLMDSFNESN
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE6 EQIGWIGSIMSSLRFCAGPLVAIICDILGEKTTSILGAFVVTGGYLISSWATSIPFLCVT
.:.:: :: . ..::.... . .:.. . .::...:. :.. .:.. . . :.
CCDS11 SRISWIISICVFVLTFSAPLATVLSNRFGHRLVVMLGGLLVSTGMVAASFSQEVSHMYVA
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE6 MGLLPGLGSAFLYQVAAVVTTKYFKKRLALSTAIARSGMGLT-FLLAPFTKFLIDLYDWT
.:.. ::: : . .... ..:: :: .. ::.: .: .. : .:: : . :
CCDS11 IGIISGLGYCFSFLPTVTILSQYFGKRRSIVTAVASTGECFAVFAFAPAIMALKERIGWR
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE6 GILETVSQIISGWVADQNWIKKYHYHKSYLILCGITNLLAPLATTFPLLMTYTICFAIFA
CCDS11 YSLLFVGLLQLNIVIFGALLRPIFIRGPASPKIVIQENRKEAQYMLENEKTRTSIDSIDS
190 200 210 220 230 240
>>CCDS8961.1 SLC16A7 gene_id:9194|Hs108|chr12 (478 aa)
initn: 500 init1: 303 opt: 353 Z-score: 429.8 bits: 88.3 E(32554): 1.3e-17
Smith-Waterman score: 353; 32.5% identity (66.3% similar) in 169 aa overlap (10-176:9-176)
10 20 30 40 50 60
pF1KE6 MLKREGKVQPYTKTLDGGWGWMIVIHFFLVNVFVMGMTKTFAIFFVVFQEEFEGTSEQIG
: ::::::..: :. : ... :. ..:: .:. :. : .:.
CCDS89 MPPMPSAPPVHPPPDGGWGWIVVGAAFISIGFSYAFPKAVTVFFKEIQQIFHTTYSEIA
10 20 30 40 50
70 80 90 100 110 120
pF1KE6 WIGSIMSSLRFCAGPLVAIICDILGEKTTSILGAFVVTGGYLISSWATSIPFLCVTMGLL
::.::: .. . .::. ... . : . . : :... :....:...:. : .:::..
CCDS89 WISSIMLAVMYAGGPVSSVLVNKYGSRPVVIAGGLLCCLGMVLASFSSSVVQLYLTMGFI
60 70 80 90 100 110
130 140 150 160 170
pF1KE6 PGLGSAFLYQVAAVVTTKYFKKRLALSTAIARSGMGLTFL--LAPFTKFLIDLYDWTGIL
::: :: : : .. ::: .. .....: .: . :: ::::...:.. . : :
CCDS89 TGLGLAFNLQPALTIIGKYFYRKRPMANGLAMAGSPV-FLSSLAPFNQYLFNTFGWKGSF
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE6 ETVSQIISGWVADQNWIKKYHYHKSYLILCGITNLLAPLATTFPLLMTYTICFAIFAGGY
CCDS89 LILGSLLLNACVAGSLMRPLGPNQTTSKSKNKTGKTEDDSSPKKIKTKKSTWEKVNKYLD
180 190 200 210 220 230
319 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 12:45:26 2016 done: Tue Nov 8 12:45:26 2016
Total Scan time: 1.690 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]