Result of FASTA (omim) for
pFN21AE6375
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE6375, 400 aa
1>>>pF1KE6375 400 - 400 aa - 400 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.6833+/-0.000418; mu= 20.4813+/- 0.026
mean_var=66.4054+/-13.849, 0's: 0 Z-trim(110.6): 73 B-trim: 948 in 1/56
Lambda= 0.157388
statistics sampled from 18973 (19029) to 18973 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.594), E-opt: 0.2 (0.223), width: 16
Scan time: 5.280
The best scores are: opt bits E(85289)
XP_011521993 (OMIM: 219750,219800,219900,606272) P ( 400) 2647 610.3 2.6e-174
XP_005256542 (OMIM: 219750,219800,219900,606272) P ( 400) 2647 610.3 2.6e-174
NP_001026851 (OMIM: 219750,219800,219900,606272) c ( 400) 2647 610.3 2.6e-174
XP_006721526 (OMIM: 219750,219800,219900,606272) P ( 400) 2647 610.3 2.6e-174
NP_004928 (OMIM: 219750,219800,219900,606272) cyst ( 367) 2404 555.1 1e-157
XP_006721527 (OMIM: 219750,219800,219900,606272) P ( 253) 1704 396.0 5.3e-110
XP_011521994 (OMIM: 219750,219800,219900,606272) P ( 253) 1704 396.0 5.3e-110
XP_016879743 (OMIM: 219750,219800,219900,606272) P ( 253) 1704 396.0 5.3e-110
XP_016879744 (OMIM: 219750,219800,219900,606272) P ( 220) 1461 340.8 2e-93
XP_016879745 (OMIM: 219750,219800,219900,606272) P ( 220) 1461 340.8 2e-93
XP_016879746 (OMIM: 219750,219800,219900,606272) P ( 220) 1461 340.8 2e-93
XP_016879747 (OMIM: 219750,219800,219900,606272) P ( 220) 1461 340.8 2e-93
>>XP_011521993 (OMIM: 219750,219800,219900,606272) PREDI (400 aa)
initn: 2647 init1: 2647 opt: 2647 Z-score: 3250.4 bits: 610.3 E(85289): 2.6e-174
Smith-Waterman score: 2647; 99.8% identity (99.8% similar) in 400 aa overlap (1-400:1-400)
10 20 30 40 50 60
pF1KE6 MIRNWLTIFILFPLKLVEKCESSVSLTVPPVVKLENGSSTNVSLTLRPPLNATLVITFEI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MIRNWLTIFILFPLKLVEKCESSVSLTVPPVVKLENGSSTNVSLTLRPPLNATLVITFEI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 TFRSKNITILELPDEVVVPPGVTNSSFQVTSQNVGQLTVYLHGNHSNQTGPRIRFLVIRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TFRSKNITILELPDEVVVPPGVTNSSFQVTSQNVGQLTVYLHGNHSNQTGPRIRFLVIRS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 SAISIINQVIGWIYFVAWSISFYPQVIMNWRRKSVIGLSFDFVALNLTGFVAYSVFNIGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SAISIINQVIGWIYFVAWSISFYPQVIMNWRRKSVIGLSFDFVALNLTGFVAYSVFNIGL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 LWVPYIKEQFLLKYPNGVNPVNSNDVFFSLHAVVLTLIIIVQCCLYERGGQRVSWPAIGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LWVPYIKEQFLLKYPNGVNPVNSNDVFFSLHAVVLTLIIIVQCCLYERGGQRVSWPAIGF
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE6 LVLAWLFAFVTMIVAAVGVITWLQFLFCFSYIKLAVTLVKYFPQAYMNFYYKSTEGWSIG
::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::
XP_011 LVLAWLFAFVTMIVAAVGVTTWLQFLFCFSYIKLAVTLVKYFPQAYMNFYYKSTEGWSIG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE6 NVLLDFTGGSFSLLQMFLQSYNNDQWTLIFGDPTKFGLGVFSIVFDVVFFIQHFCLYRKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NVLLDFTGGSFSLLQMFLQSYNNDQWTLIFGDPTKFGLGVFSIVFDVVFFIQHFCLYRKR
310 320 330 340 350 360
370 380 390 400
pF1KE6 PGLQAARTGSGSRLRQDWAPSLQPKALPQTTSVSASSLKG
::::::::::::::::::::::::::::::::::::::::
XP_011 PGLQAARTGSGSRLRQDWAPSLQPKALPQTTSVSASSLKG
370 380 390 400
>>XP_005256542 (OMIM: 219750,219800,219900,606272) PREDI (400 aa)
initn: 2647 init1: 2647 opt: 2647 Z-score: 3250.4 bits: 610.3 E(85289): 2.6e-174
Smith-Waterman score: 2647; 99.8% identity (99.8% similar) in 400 aa overlap (1-400:1-400)
10 20 30 40 50 60
pF1KE6 MIRNWLTIFILFPLKLVEKCESSVSLTVPPVVKLENGSSTNVSLTLRPPLNATLVITFEI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MIRNWLTIFILFPLKLVEKCESSVSLTVPPVVKLENGSSTNVSLTLRPPLNATLVITFEI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 TFRSKNITILELPDEVVVPPGVTNSSFQVTSQNVGQLTVYLHGNHSNQTGPRIRFLVIRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TFRSKNITILELPDEVVVPPGVTNSSFQVTSQNVGQLTVYLHGNHSNQTGPRIRFLVIRS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 SAISIINQVIGWIYFVAWSISFYPQVIMNWRRKSVIGLSFDFVALNLTGFVAYSVFNIGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SAISIINQVIGWIYFVAWSISFYPQVIMNWRRKSVIGLSFDFVALNLTGFVAYSVFNIGL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 LWVPYIKEQFLLKYPNGVNPVNSNDVFFSLHAVVLTLIIIVQCCLYERGGQRVSWPAIGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LWVPYIKEQFLLKYPNGVNPVNSNDVFFSLHAVVLTLIIIVQCCLYERGGQRVSWPAIGF
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE6 LVLAWLFAFVTMIVAAVGVITWLQFLFCFSYIKLAVTLVKYFPQAYMNFYYKSTEGWSIG
::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::
XP_005 LVLAWLFAFVTMIVAAVGVTTWLQFLFCFSYIKLAVTLVKYFPQAYMNFYYKSTEGWSIG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE6 NVLLDFTGGSFSLLQMFLQSYNNDQWTLIFGDPTKFGLGVFSIVFDVVFFIQHFCLYRKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 NVLLDFTGGSFSLLQMFLQSYNNDQWTLIFGDPTKFGLGVFSIVFDVVFFIQHFCLYRKR
310 320 330 340 350 360
370 380 390 400
pF1KE6 PGLQAARTGSGSRLRQDWAPSLQPKALPQTTSVSASSLKG
::::::::::::::::::::::::::::::::::::::::
XP_005 PGLQAARTGSGSRLRQDWAPSLQPKALPQTTSVSASSLKG
370 380 390 400
>>NP_001026851 (OMIM: 219750,219800,219900,606272) cysti (400 aa)
initn: 2647 init1: 2647 opt: 2647 Z-score: 3250.4 bits: 610.3 E(85289): 2.6e-174
Smith-Waterman score: 2647; 99.8% identity (99.8% similar) in 400 aa overlap (1-400:1-400)
10 20 30 40 50 60
pF1KE6 MIRNWLTIFILFPLKLVEKCESSVSLTVPPVVKLENGSSTNVSLTLRPPLNATLVITFEI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MIRNWLTIFILFPLKLVEKCESSVSLTVPPVVKLENGSSTNVSLTLRPPLNATLVITFEI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 TFRSKNITILELPDEVVVPPGVTNSSFQVTSQNVGQLTVYLHGNHSNQTGPRIRFLVIRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TFRSKNITILELPDEVVVPPGVTNSSFQVTSQNVGQLTVYLHGNHSNQTGPRIRFLVIRS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 SAISIINQVIGWIYFVAWSISFYPQVIMNWRRKSVIGLSFDFVALNLTGFVAYSVFNIGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SAISIINQVIGWIYFVAWSISFYPQVIMNWRRKSVIGLSFDFVALNLTGFVAYSVFNIGL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 LWVPYIKEQFLLKYPNGVNPVNSNDVFFSLHAVVLTLIIIVQCCLYERGGQRVSWPAIGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LWVPYIKEQFLLKYPNGVNPVNSNDVFFSLHAVVLTLIIIVQCCLYERGGQRVSWPAIGF
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE6 LVLAWLFAFVTMIVAAVGVITWLQFLFCFSYIKLAVTLVKYFPQAYMNFYYKSTEGWSIG
::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::
NP_001 LVLAWLFAFVTMIVAAVGVTTWLQFLFCFSYIKLAVTLVKYFPQAYMNFYYKSTEGWSIG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE6 NVLLDFTGGSFSLLQMFLQSYNNDQWTLIFGDPTKFGLGVFSIVFDVVFFIQHFCLYRKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NVLLDFTGGSFSLLQMFLQSYNNDQWTLIFGDPTKFGLGVFSIVFDVVFFIQHFCLYRKR
310 320 330 340 350 360
370 380 390 400
pF1KE6 PGLQAARTGSGSRLRQDWAPSLQPKALPQTTSVSASSLKG
::::::::::::::::::::::::::::::::::::::::
NP_001 PGLQAARTGSGSRLRQDWAPSLQPKALPQTTSVSASSLKG
370 380 390 400
>>XP_006721526 (OMIM: 219750,219800,219900,606272) PREDI (400 aa)
initn: 2647 init1: 2647 opt: 2647 Z-score: 3250.4 bits: 610.3 E(85289): 2.6e-174
Smith-Waterman score: 2647; 99.8% identity (99.8% similar) in 400 aa overlap (1-400:1-400)
10 20 30 40 50 60
pF1KE6 MIRNWLTIFILFPLKLVEKCESSVSLTVPPVVKLENGSSTNVSLTLRPPLNATLVITFEI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MIRNWLTIFILFPLKLVEKCESSVSLTVPPVVKLENGSSTNVSLTLRPPLNATLVITFEI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 TFRSKNITILELPDEVVVPPGVTNSSFQVTSQNVGQLTVYLHGNHSNQTGPRIRFLVIRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 TFRSKNITILELPDEVVVPPGVTNSSFQVTSQNVGQLTVYLHGNHSNQTGPRIRFLVIRS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 SAISIINQVIGWIYFVAWSISFYPQVIMNWRRKSVIGLSFDFVALNLTGFVAYSVFNIGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 SAISIINQVIGWIYFVAWSISFYPQVIMNWRRKSVIGLSFDFVALNLTGFVAYSVFNIGL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 LWVPYIKEQFLLKYPNGVNPVNSNDVFFSLHAVVLTLIIIVQCCLYERGGQRVSWPAIGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LWVPYIKEQFLLKYPNGVNPVNSNDVFFSLHAVVLTLIIIVQCCLYERGGQRVSWPAIGF
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE6 LVLAWLFAFVTMIVAAVGVITWLQFLFCFSYIKLAVTLVKYFPQAYMNFYYKSTEGWSIG
::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::
XP_006 LVLAWLFAFVTMIVAAVGVTTWLQFLFCFSYIKLAVTLVKYFPQAYMNFYYKSTEGWSIG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE6 NVLLDFTGGSFSLLQMFLQSYNNDQWTLIFGDPTKFGLGVFSIVFDVVFFIQHFCLYRKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 NVLLDFTGGSFSLLQMFLQSYNNDQWTLIFGDPTKFGLGVFSIVFDVVFFIQHFCLYRKR
310 320 330 340 350 360
370 380 390 400
pF1KE6 PGLQAARTGSGSRLRQDWAPSLQPKALPQTTSVSASSLKG
::::::::::::::::::::::::::::::::::::::::
XP_006 PGLQAARTGSGSRLRQDWAPSLQPKALPQTTSVSASSLKG
370 380 390 400
>>NP_004928 (OMIM: 219750,219800,219900,606272) cystinos (367 aa)
initn: 2404 init1: 2404 opt: 2404 Z-score: 2952.7 bits: 555.1 E(85289): 1e-157
Smith-Waterman score: 2404; 99.7% identity (99.7% similar) in 362 aa overlap (1-362:1-362)
10 20 30 40 50 60
pF1KE6 MIRNWLTIFILFPLKLVEKCESSVSLTVPPVVKLENGSSTNVSLTLRPPLNATLVITFEI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 MIRNWLTIFILFPLKLVEKCESSVSLTVPPVVKLENGSSTNVSLTLRPPLNATLVITFEI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 TFRSKNITILELPDEVVVPPGVTNSSFQVTSQNVGQLTVYLHGNHSNQTGPRIRFLVIRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 TFRSKNITILELPDEVVVPPGVTNSSFQVTSQNVGQLTVYLHGNHSNQTGPRIRFLVIRS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 SAISIINQVIGWIYFVAWSISFYPQVIMNWRRKSVIGLSFDFVALNLTGFVAYSVFNIGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 SAISIINQVIGWIYFVAWSISFYPQVIMNWRRKSVIGLSFDFVALNLTGFVAYSVFNIGL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 LWVPYIKEQFLLKYPNGVNPVNSNDVFFSLHAVVLTLIIIVQCCLYERGGQRVSWPAIGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 LWVPYIKEQFLLKYPNGVNPVNSNDVFFSLHAVVLTLIIIVQCCLYERGGQRVSWPAIGF
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE6 LVLAWLFAFVTMIVAAVGVITWLQFLFCFSYIKLAVTLVKYFPQAYMNFYYKSTEGWSIG
::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::
NP_004 LVLAWLFAFVTMIVAAVGVTTWLQFLFCFSYIKLAVTLVKYFPQAYMNFYYKSTEGWSIG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE6 NVLLDFTGGSFSLLQMFLQSYNNDQWTLIFGDPTKFGLGVFSIVFDVVFFIQHFCLYRKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 NVLLDFTGGSFSLLQMFLQSYNNDQWTLIFGDPTKFGLGVFSIVFDVVFFIQHFCLYRKR
310 320 330 340 350 360
370 380 390 400
pF1KE6 PGLQAARTGSGSRLRQDWAPSLQPKALPQTTSVSASSLKG
::
NP_004 PGYDQLN
>>XP_006721527 (OMIM: 219750,219800,219900,606272) PREDI (253 aa)
initn: 1704 init1: 1704 opt: 1704 Z-score: 2095.8 bits: 396.0 E(85289): 5.3e-110
Smith-Waterman score: 1704; 99.6% identity (99.6% similar) in 253 aa overlap (148-400:1-253)
120 130 140 150 160 170
pF1KE6 IRSSAISIINQVIGWIYFVAWSISFYPQVIMNWRRKSVIGLSFDFVALNLTGFVAYSVFN
::::::::::::::::::::::::::::::
XP_006 MNWRRKSVIGLSFDFVALNLTGFVAYSVFN
10 20 30
180 190 200 210 220 230
pF1KE6 IGLLWVPYIKEQFLLKYPNGVNPVNSNDVFFSLHAVVLTLIIIVQCCLYERGGQRVSWPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 IGLLWVPYIKEQFLLKYPNGVNPVNSNDVFFSLHAVVLTLIIIVQCCLYERGGQRVSWPA
40 50 60 70 80 90
240 250 260 270 280 290
pF1KE6 IGFLVLAWLFAFVTMIVAAVGVITWLQFLFCFSYIKLAVTLVKYFPQAYMNFYYKSTEGW
:::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::
XP_006 IGFLVLAWLFAFVTMIVAAVGVTTWLQFLFCFSYIKLAVTLVKYFPQAYMNFYYKSTEGW
100 110 120 130 140 150
300 310 320 330 340 350
pF1KE6 SIGNVLLDFTGGSFSLLQMFLQSYNNDQWTLIFGDPTKFGLGVFSIVFDVVFFIQHFCLY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 SIGNVLLDFTGGSFSLLQMFLQSYNNDQWTLIFGDPTKFGLGVFSIVFDVVFFIQHFCLY
160 170 180 190 200 210
360 370 380 390 400
pF1KE6 RKRPGLQAARTGSGSRLRQDWAPSLQPKALPQTTSVSASSLKG
:::::::::::::::::::::::::::::::::::::::::::
XP_006 RKRPGLQAARTGSGSRLRQDWAPSLQPKALPQTTSVSASSLKG
220 230 240 250
>>XP_011521994 (OMIM: 219750,219800,219900,606272) PREDI (253 aa)
initn: 1704 init1: 1704 opt: 1704 Z-score: 2095.8 bits: 396.0 E(85289): 5.3e-110
Smith-Waterman score: 1704; 99.6% identity (99.6% similar) in 253 aa overlap (148-400:1-253)
120 130 140 150 160 170
pF1KE6 IRSSAISIINQVIGWIYFVAWSISFYPQVIMNWRRKSVIGLSFDFVALNLTGFVAYSVFN
::::::::::::::::::::::::::::::
XP_011 MNWRRKSVIGLSFDFVALNLTGFVAYSVFN
10 20 30
180 190 200 210 220 230
pF1KE6 IGLLWVPYIKEQFLLKYPNGVNPVNSNDVFFSLHAVVLTLIIIVQCCLYERGGQRVSWPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IGLLWVPYIKEQFLLKYPNGVNPVNSNDVFFSLHAVVLTLIIIVQCCLYERGGQRVSWPA
40 50 60 70 80 90
240 250 260 270 280 290
pF1KE6 IGFLVLAWLFAFVTMIVAAVGVITWLQFLFCFSYIKLAVTLVKYFPQAYMNFYYKSTEGW
:::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::
XP_011 IGFLVLAWLFAFVTMIVAAVGVTTWLQFLFCFSYIKLAVTLVKYFPQAYMNFYYKSTEGW
100 110 120 130 140 150
300 310 320 330 340 350
pF1KE6 SIGNVLLDFTGGSFSLLQMFLQSYNNDQWTLIFGDPTKFGLGVFSIVFDVVFFIQHFCLY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SIGNVLLDFTGGSFSLLQMFLQSYNNDQWTLIFGDPTKFGLGVFSIVFDVVFFIQHFCLY
160 170 180 190 200 210
360 370 380 390 400
pF1KE6 RKRPGLQAARTGSGSRLRQDWAPSLQPKALPQTTSVSASSLKG
:::::::::::::::::::::::::::::::::::::::::::
XP_011 RKRPGLQAARTGSGSRLRQDWAPSLQPKALPQTTSVSASSLKG
220 230 240 250
>>XP_016879743 (OMIM: 219750,219800,219900,606272) PREDI (253 aa)
initn: 1704 init1: 1704 opt: 1704 Z-score: 2095.8 bits: 396.0 E(85289): 5.3e-110
Smith-Waterman score: 1704; 99.6% identity (99.6% similar) in 253 aa overlap (148-400:1-253)
120 130 140 150 160 170
pF1KE6 IRSSAISIINQVIGWIYFVAWSISFYPQVIMNWRRKSVIGLSFDFVALNLTGFVAYSVFN
::::::::::::::::::::::::::::::
XP_016 MNWRRKSVIGLSFDFVALNLTGFVAYSVFN
10 20 30
180 190 200 210 220 230
pF1KE6 IGLLWVPYIKEQFLLKYPNGVNPVNSNDVFFSLHAVVLTLIIIVQCCLYERGGQRVSWPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IGLLWVPYIKEQFLLKYPNGVNPVNSNDVFFSLHAVVLTLIIIVQCCLYERGGQRVSWPA
40 50 60 70 80 90
240 250 260 270 280 290
pF1KE6 IGFLVLAWLFAFVTMIVAAVGVITWLQFLFCFSYIKLAVTLVKYFPQAYMNFYYKSTEGW
:::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::
XP_016 IGFLVLAWLFAFVTMIVAAVGVTTWLQFLFCFSYIKLAVTLVKYFPQAYMNFYYKSTEGW
100 110 120 130 140 150
300 310 320 330 340 350
pF1KE6 SIGNVLLDFTGGSFSLLQMFLQSYNNDQWTLIFGDPTKFGLGVFSIVFDVVFFIQHFCLY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SIGNVLLDFTGGSFSLLQMFLQSYNNDQWTLIFGDPTKFGLGVFSIVFDVVFFIQHFCLY
160 170 180 190 200 210
360 370 380 390 400
pF1KE6 RKRPGLQAARTGSGSRLRQDWAPSLQPKALPQTTSVSASSLKG
:::::::::::::::::::::::::::::::::::::::::::
XP_016 RKRPGLQAARTGSGSRLRQDWAPSLQPKALPQTTSVSASSLKG
220 230 240 250
>>XP_016879744 (OMIM: 219750,219800,219900,606272) PREDI (220 aa)
initn: 1461 init1: 1461 opt: 1461 Z-score: 1798.4 bits: 340.8 E(85289): 2e-93
Smith-Waterman score: 1461; 99.5% identity (99.5% similar) in 215 aa overlap (148-362:1-215)
120 130 140 150 160 170
pF1KE6 IRSSAISIINQVIGWIYFVAWSISFYPQVIMNWRRKSVIGLSFDFVALNLTGFVAYSVFN
::::::::::::::::::::::::::::::
XP_016 MNWRRKSVIGLSFDFVALNLTGFVAYSVFN
10 20 30
180 190 200 210 220 230
pF1KE6 IGLLWVPYIKEQFLLKYPNGVNPVNSNDVFFSLHAVVLTLIIIVQCCLYERGGQRVSWPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IGLLWVPYIKEQFLLKYPNGVNPVNSNDVFFSLHAVVLTLIIIVQCCLYERGGQRVSWPA
40 50 60 70 80 90
240 250 260 270 280 290
pF1KE6 IGFLVLAWLFAFVTMIVAAVGVITWLQFLFCFSYIKLAVTLVKYFPQAYMNFYYKSTEGW
:::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::
XP_016 IGFLVLAWLFAFVTMIVAAVGVTTWLQFLFCFSYIKLAVTLVKYFPQAYMNFYYKSTEGW
100 110 120 130 140 150
300 310 320 330 340 350
pF1KE6 SIGNVLLDFTGGSFSLLQMFLQSYNNDQWTLIFGDPTKFGLGVFSIVFDVVFFIQHFCLY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SIGNVLLDFTGGSFSLLQMFLQSYNNDQWTLIFGDPTKFGLGVFSIVFDVVFFIQHFCLY
160 170 180 190 200 210
360 370 380 390 400
pF1KE6 RKRPGLQAARTGSGSRLRQDWAPSLQPKALPQTTSVSASSLKG
:::::
XP_016 RKRPGYDQLN
220
>>XP_016879745 (OMIM: 219750,219800,219900,606272) PREDI (220 aa)
initn: 1461 init1: 1461 opt: 1461 Z-score: 1798.4 bits: 340.8 E(85289): 2e-93
Smith-Waterman score: 1461; 99.5% identity (99.5% similar) in 215 aa overlap (148-362:1-215)
120 130 140 150 160 170
pF1KE6 IRSSAISIINQVIGWIYFVAWSISFYPQVIMNWRRKSVIGLSFDFVALNLTGFVAYSVFN
::::::::::::::::::::::::::::::
XP_016 MNWRRKSVIGLSFDFVALNLTGFVAYSVFN
10 20 30
180 190 200 210 220 230
pF1KE6 IGLLWVPYIKEQFLLKYPNGVNPVNSNDVFFSLHAVVLTLIIIVQCCLYERGGQRVSWPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IGLLWVPYIKEQFLLKYPNGVNPVNSNDVFFSLHAVVLTLIIIVQCCLYERGGQRVSWPA
40 50 60 70 80 90
240 250 260 270 280 290
pF1KE6 IGFLVLAWLFAFVTMIVAAVGVITWLQFLFCFSYIKLAVTLVKYFPQAYMNFYYKSTEGW
:::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::
XP_016 IGFLVLAWLFAFVTMIVAAVGVTTWLQFLFCFSYIKLAVTLVKYFPQAYMNFYYKSTEGW
100 110 120 130 140 150
300 310 320 330 340 350
pF1KE6 SIGNVLLDFTGGSFSLLQMFLQSYNNDQWTLIFGDPTKFGLGVFSIVFDVVFFIQHFCLY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SIGNVLLDFTGGSFSLLQMFLQSYNNDQWTLIFGDPTKFGLGVFSIVFDVVFFIQHFCLY
160 170 180 190 200 210
360 370 380 390 400
pF1KE6 RKRPGLQAARTGSGSRLRQDWAPSLQPKALPQTTSVSASSLKG
:::::
XP_016 RKRPGYDQLN
220
400 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 12:42:39 2016 done: Tue Nov 8 12:42:40 2016
Total Scan time: 5.280 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]