Result of FASTA (omim) for
pFN21AE6360
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE6360, 324 aa
1>>>pF1KE6360 324 - 324 aa - 324 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.9651+/-0.000261; mu= 13.9265+/- 0.017
mean_var=79.1838+/-15.910, 0's: 0 Z-trim(120.8): 19 B-trim: 0 in 0/61
Lambda= 0.144131
statistics sampled from 36517 (36536) to 36517 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.756), E-opt: 0.2 (0.428), width: 16
Scan time: 6.710
The best scores are: opt bits E(85289)
XP_011539438 (OMIM: 605632,615553) PREDICTED: UDP- ( 325) 322 75.6 1.5e-13
XP_005270748 (OMIM: 605632,615553) PREDICTED: UDP- ( 325) 322 75.6 1.5e-13
NP_036375 (OMIM: 605632,615553) UDP-N-acetylglucos ( 325) 322 75.6 1.5e-13
NP_001258614 (OMIM: 605632,615553) UDP-N-acetylglu ( 367) 322 75.7 1.7e-13
NP_001269578 (OMIM: 300896,314375) UDP-galactose t ( 332) 294 69.8 8.9e-12
NP_001035963 (OMIM: 300896,314375) UDP-galactose t ( 393) 295 70.0 8.9e-12
NP_005651 (OMIM: 300896,314375) UDP-galactose tran ( 396) 295 70.1 8.9e-12
NP_001269579 (OMIM: 300896,314375) UDP-galactose t ( 406) 295 70.1 9.1e-12
NP_001269580 (OMIM: 300896,314375) UDP-galactose t ( 421) 295 70.1 9.4e-12
XP_016856361 (OMIM: 605632,615553) PREDICTED: UDP- ( 195) 250 60.6 3.2e-09
NP_006407 (OMIM: 603585,605634) CMP-sialic acid tr ( 337) 239 58.4 2.5e-08
XP_016856358 (OMIM: 605632,615553) PREDICTED: UDP- ( 284) 237 57.9 2.9e-08
XP_011539437 (OMIM: 605632,615553) PREDICTED: UDP- ( 326) 237 58.0 3.2e-08
>>XP_011539438 (OMIM: 605632,615553) PREDICTED: UDP-N-ac (325 aa)
initn: 304 init1: 130 opt: 322 Z-score: 364.0 bits: 75.6 E(85289): 1.5e-13
Smith-Waterman score: 322; 30.0% identity (65.8% similar) in 237 aa overlap (89-320:87-312)
60 70 80 90 100 110
pF1KE6 LTKLLLCAFSLLVGWQAWPQGPPPWRQAAPFALSALLYGANNNLVIYLQRYMDPSTYQVL
.:. . .: .:::. .: .::::
XP_011 LVYKDSKCSLRALNRVLHDEILNKPMETLKLAIPSGIYTLQNNLLYVALSNLDAATYQVT
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE6 SNLKIGSTAVLYCLCLRHRLSVRQGLALLLLMAAGACYAAGGLQVPGNTLPSPPPAAAAS
.::: .::.. : ..:.: : :.:..::. :. . .: :... . .:.:
XP_011 YQLKILTTALFSVSMLSKKLGVYQWLSLVILMT-GVAF----VQWPSDSQLDSKELSAGS
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE6 PMPLHITPLGLLLLILYCLISGLSSVYTELLMKRQRLPLALQNLFLYTFGVLLNL-GLHA
. .::. .. :. ::...:: : ..:. . . ..:. : :: ...: :..
XP_011 QF------VGLMAVLTACFSSGFAGVYFEKILKETKQSVWIRNIQLGFFGSIFGLMGVYI
180 190 200 210 220
240 250 260 270 280 290
pF1KE6 GGG---SGPGLLEGFSGWAALVVLSQALNGLLMSAVMKHGSSITRLFVVSCSLVVNAVLS
: : :...:.. . .::. :::.::...::.:....: . :..: :.......:
XP_011 YDGELVSKNGFFQGYNRLTWIVVVLQALGGLVIAAVIKYADNILKGFATSLSIILSTLIS
230 240 250 260 270 280
300 310 320
pF1KE6 AVLLR-LQLTAAFFLATLLIGLAMRLYYGSR
:. . :..:::...:. : ::
XP_011 YFWLQDFVPTSVFFLGAILVITATFLYGYDPKPAGNPTKA
290 300 310 320
>>XP_005270748 (OMIM: 605632,615553) PREDICTED: UDP-N-ac (325 aa)
initn: 304 init1: 130 opt: 322 Z-score: 364.0 bits: 75.6 E(85289): 1.5e-13
Smith-Waterman score: 322; 30.0% identity (65.8% similar) in 237 aa overlap (89-320:87-312)
60 70 80 90 100 110
pF1KE6 LTKLLLCAFSLLVGWQAWPQGPPPWRQAAPFALSALLYGANNNLVIYLQRYMDPSTYQVL
.:. . .: .:::. .: .::::
XP_005 LVYKDSKCSLRALNRVLHDEILNKPMETLKLAIPSGIYTLQNNLLYVALSNLDAATYQVT
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE6 SNLKIGSTAVLYCLCLRHRLSVRQGLALLLLMAAGACYAAGGLQVPGNTLPSPPPAAAAS
.::: .::.. : ..:.: : :.:..::. :. . .: :... . .:.:
XP_005 YQLKILTTALFSVSMLSKKLGVYQWLSLVILMT-GVAF----VQWPSDSQLDSKELSAGS
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE6 PMPLHITPLGLLLLILYCLISGLSSVYTELLMKRQRLPLALQNLFLYTFGVLLNL-GLHA
. .::. .. :. ::...:: : ..:. . . ..:. : :: ...: :..
XP_005 QF------VGLMAVLTACFSSGFAGVYFEKILKETKQSVWIRNIQLGFFGSIFGLMGVYI
180 190 200 210 220
240 250 260 270 280 290
pF1KE6 GGG---SGPGLLEGFSGWAALVVLSQALNGLLMSAVMKHGSSITRLFVVSCSLVVNAVLS
: : :...:.. . .::. :::.::...::.:....: . :..: :.......:
XP_005 YDGELVSKNGFFQGYNRLTWIVVVLQALGGLVIAAVIKYADNILKGFATSLSIILSTLIS
230 240 250 260 270 280
300 310 320
pF1KE6 AVLLR-LQLTAAFFLATLLIGLAMRLYYGSR
:. . :..:::...:. : ::
XP_005 YFWLQDFVPTSVFFLGAILVITATFLYGYDPKPAGNPTKA
290 300 310 320
>>NP_036375 (OMIM: 605632,615553) UDP-N-acetylglucosamin (325 aa)
initn: 304 init1: 130 opt: 322 Z-score: 364.0 bits: 75.6 E(85289): 1.5e-13
Smith-Waterman score: 322; 30.0% identity (65.8% similar) in 237 aa overlap (89-320:87-312)
60 70 80 90 100 110
pF1KE6 LTKLLLCAFSLLVGWQAWPQGPPPWRQAAPFALSALLYGANNNLVIYLQRYMDPSTYQVL
.:. . .: .:::. .: .::::
NP_036 LVYKDSKCSLRALNRVLHDEILNKPMETLKLAIPSGIYTLQNNLLYVALSNLDAATYQVT
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE6 SNLKIGSTAVLYCLCLRHRLSVRQGLALLLLMAAGACYAAGGLQVPGNTLPSPPPAAAAS
.::: .::.. : ..:.: : :.:..::. :. . .: :... . .:.:
NP_036 YQLKILTTALFSVSMLSKKLGVYQWLSLVILMT-GVAF----VQWPSDSQLDSKELSAGS
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE6 PMPLHITPLGLLLLILYCLISGLSSVYTELLMKRQRLPLALQNLFLYTFGVLLNL-GLHA
. .::. .. :. ::...:: : ..:. . . ..:. : :: ...: :..
NP_036 QF------VGLMAVLTACFSSGFAGVYFEKILKETKQSVWIRNIQLGFFGSIFGLMGVYI
180 190 200 210 220
240 250 260 270 280 290
pF1KE6 GGG---SGPGLLEGFSGWAALVVLSQALNGLLMSAVMKHGSSITRLFVVSCSLVVNAVLS
: : :...:.. . .::. :::.::...::.:....: . :..: :.......:
NP_036 YDGELVSKNGFFQGYNRLTWIVVVLQALGGLVIAAVIKYADNILKGFATSLSIILSTLIS
230 240 250 260 270 280
300 310 320
pF1KE6 AVLLR-LQLTAAFFLATLLIGLAMRLYYGSR
:. . :..:::...:. : ::
NP_036 YFWLQDFVPTSVFFLGAILVITATFLYGYDPKPAGNPTKA
290 300 310 320
>>NP_001258614 (OMIM: 605632,615553) UDP-N-acetylglucosa (367 aa)
initn: 304 init1: 130 opt: 322 Z-score: 363.2 bits: 75.7 E(85289): 1.7e-13
Smith-Waterman score: 322; 30.0% identity (65.8% similar) in 237 aa overlap (89-320:129-354)
60 70 80 90 100 110
pF1KE6 LTKLLLCAFSLLVGWQAWPQGPPPWRQAAPFALSALLYGANNNLVIYLQRYMDPSTYQVL
.:. . .: .:::. .: .::::
NP_001 LVYKDSKCSLRALNRVLHDEILNKPMETLKLAIPSGIYTLQNNLLYVALSNLDAATYQVT
100 110 120 130 140 150
120 130 140 150 160 170
pF1KE6 SNLKIGSTAVLYCLCLRHRLSVRQGLALLLLMAAGACYAAGGLQVPGNTLPSPPPAAAAS
.::: .::.. : ..:.: : :.:..::. :. . .: :... . .:.:
NP_001 YQLKILTTALFSVSMLSKKLGVYQWLSLVILMT-GVAF----VQWPSDSQLDSKELSAGS
160 170 180 190 200 210
180 190 200 210 220 230
pF1KE6 PMPLHITPLGLLLLILYCLISGLSSVYTELLMKRQRLPLALQNLFLYTFGVLLNL-GLHA
. .::. .. :. ::...:: : ..:. . . ..:. : :: ...: :..
NP_001 QF------VGLMAVLTACFSSGFAGVYFEKILKETKQSVWIRNIQLGFFGSIFGLMGVYI
220 230 240 250 260
240 250 260 270 280 290
pF1KE6 GGG---SGPGLLEGFSGWAALVVLSQALNGLLMSAVMKHGSSITRLFVVSCSLVVNAVLS
: : :...:.. . .::. :::.::...::.:....: . :..: :.......:
NP_001 YDGELVSKNGFFQGYNRLTWIVVVLQALGGLVIAAVIKYADNILKGFATSLSIILSTLIS
270 280 290 300 310 320
300 310 320
pF1KE6 AVLLR-LQLTAAFFLATLLIGLAMRLYYGSR
:. . :..:::...:. : ::
NP_001 YFWLQDFVPTSVFFLGAILVITATFLYGYDPKPAGNPTKA
330 340 350 360
>>NP_001269578 (OMIM: 300896,314375) UDP-galactose trans (332 aa)
initn: 290 init1: 123 opt: 294 Z-score: 332.4 bits: 69.8 E(85289): 8.9e-12
Smith-Waterman score: 294; 33.2% identity (61.8% similar) in 238 aa overlap (89-320:54-277)
60 70 80 90 100 110
pF1KE6 LTKLLLCAFSLLVGWQAWPQGPPPWRQAAPFALSALLYGANNNLVIYLQRYMDPSTYQVL
.:. .:.: .::: . .:.::
NP_001 EPGTASAGNVKHLVLFLHEAVLVQYVDTLKLAVPSLIYTLQNNLQYVAISNLPAATFQVT
30 40 50 60 70 80
120 130 140 150 160 170
pF1KE6 SNLKIGSTAVLYCLCLRHRLSVRQGLALLLLMAAGACYAAGGLQVPGNTLPSPPPAAAAS
.::: .::.. : : . :: : .::::.. : .. . :....
NP_001 YQLKILTTALFSVLMLNRSLSRLQWASLLLLFT-------------GVAIVQAQQAGGGG
90 100 110 120 130
180 190 200 210 220 230
pF1KE6 PMPLHITP-LGLLLLILYCLISGLSSVYTELLMKRQRLPLALQNLFLYTFGVLLNL-GLH
: :: .: :: .. :: ::...:: : ..: . . :.:: : ::. :.: ::
NP_001 PRPLDQNPGAGLAAVVASCLSSGFAGVYFEKILKGSSGSVWLRNLQLGLFGTALGLVGLW
140 150 160 170 180 190
240 250 260 270 280 290
pF1KE6 AGGGSGP---GLLEGFSGWAALVVLSQALNGLLMSAVMKHGSSITRLFVVSCSLVVNAVL
. :.. :.. :.. . :::.::..:::...:.:....: . :..: :.:...:
NP_001 WAEGTAVATRGFFFGYTPAVWGVVLNQAFGGLLVAVVVKYADNILKGFATSLSIVLSTVA
200 210 220 230 240 250
300 310 320
pF1KE6 SAVLLRLQLTAAFFL-ATLLIGLAMRLYYGSR
: :. ... : : : :.:: :. ::
NP_001 SIRLFGFHVDPLFALGAGLVIG-AVYLYSLPRGAAKAIASASASASGPCVHQQPPGQPPP
260 270 280 290 300
>>NP_001035963 (OMIM: 300896,314375) UDP-galactose trans (393 aa)
initn: 290 init1: 123 opt: 295 Z-score: 332.4 bits: 70.0 E(85289): 8.9e-12
Smith-Waterman score: 295; 30.6% identity (59.0% similar) in 288 aa overlap (48-320:65-338)
20 30 40 50 60 70
pF1KE6 RWTLMLLLSTAMYGAHAPLLALCHVDGRVPFRPSSAVLLTELTKLLLCAFSLLVGWQAWP
: ..::...:. : : : . :.. ..
NP_001 LKYISLAVLVVQNASLILSIRYARTLPGDRFFATTAVVMAEVLKGLTCLLLLFAQKRGNV
40 50 60 70 80 90
80 90 100 110 120
pF1KE6 QGPPPWRQAA---------PFALSALLYGANNNLVIYLQRYMDPSTYQVLSNLKIGSTAV
. . . : .:. .:.: .::: . .:.:: .::: .::.
NP_001 KHLVLFLHEAVLVQYVDTLKLAVPSLIYTLQNNLQYVAISNLPAATFQVTYQLKILTTAL
100 110 120 130 140 150
130 140 150 160 170 180
pF1KE6 LYCLCLRHRLSVRQGLALLLLMAAGACYAAGGLQVPGNTLPSPPPAAAASPMPLHITP-L
. : : . :: : .::::.. : .. . :....: :: .:
NP_001 FSVLMLNRSLSRLQWASLLLLFT-------------GVAIVQAQQAGGGGPRPLDQNPGA
160 170 180 190 200
190 200 210 220 230 240
pF1KE6 GLLLLILYCLISGLSSVYTELLMKRQRLPLALQNLFLYTFGVLLNL-GLHAGGGSGP---
:: .. :: ::...:: : ..: . . :.:: : ::. :.: :: . :..
NP_001 GLAAVVASCLSSGFAGVYFEKILKGSSGSVWLRNLQLGLFGTALGLVGLWWAEGTAVATR
210 220 230 240 250 260
250 260 270 280 290 300
pF1KE6 GLLEGFSGWAALVVLSQALNGLLMSAVMKHGSSITRLFVVSCSLVVNAVLSAVLLRLQLT
:.. :.. . :::.::..:::...:.:....: . :..: :.:...: : :. ...
NP_001 GFFFGYTPAVWGVVLNQAFGGLLVAVVVKYADNILKGFATSLSIVLSTVASIRLFGFHVD
270 280 290 300 310 320
310 320
pF1KE6 AAFFL-ATLLIGLAMRLYYGSR
: : : :.:: :. ::
NP_001 PLFALGAGLVIG-AVYLYSLPRGAAKAIASASASASGPCVHQQPPGQPPPPQLSSHRGDL
330 340 350 360 370 380
>>NP_005651 (OMIM: 300896,314375) UDP-galactose transloc (396 aa)
initn: 290 init1: 123 opt: 295 Z-score: 332.4 bits: 70.1 E(85289): 8.9e-12
Smith-Waterman score: 295; 30.6% identity (59.0% similar) in 288 aa overlap (48-320:65-338)
20 30 40 50 60 70
pF1KE6 RWTLMLLLSTAMYGAHAPLLALCHVDGRVPFRPSSAVLLTELTKLLLCAFSLLVGWQAWP
: ..::...:. : : : . :.. ..
NP_005 LKYISLAVLVVQNASLILSIRYARTLPGDRFFATTAVVMAEVLKGLTCLLLLFAQKRGNV
40 50 60 70 80 90
80 90 100 110 120
pF1KE6 QGPPPWRQAA---------PFALSALLYGANNNLVIYLQRYMDPSTYQVLSNLKIGSTAV
. . . : .:. .:.: .::: . .:.:: .::: .::.
NP_005 KHLVLFLHEAVLVQYVDTLKLAVPSLIYTLQNNLQYVAISNLPAATFQVTYQLKILTTAL
100 110 120 130 140 150
130 140 150 160 170 180
pF1KE6 LYCLCLRHRLSVRQGLALLLLMAAGACYAAGGLQVPGNTLPSPPPAAAASPMPLHITP-L
. : : . :: : .::::.. : .. . :....: :: .:
NP_005 FSVLMLNRSLSRLQWASLLLLFT-------------GVAIVQAQQAGGGGPRPLDQNPGA
160 170 180 190 200
190 200 210 220 230 240
pF1KE6 GLLLLILYCLISGLSSVYTELLMKRQRLPLALQNLFLYTFGVLLNL-GLHAGGGSGP---
:: .. :: ::...:: : ..: . . :.:: : ::. :.: :: . :..
NP_005 GLAAVVASCLSSGFAGVYFEKILKGSSGSVWLRNLQLGLFGTALGLVGLWWAEGTAVATR
210 220 230 240 250 260
250 260 270 280 290 300
pF1KE6 GLLEGFSGWAALVVLSQALNGLLMSAVMKHGSSITRLFVVSCSLVVNAVLSAVLLRLQLT
:.. :.. . :::.::..:::...:.:....: . :..: :.:...: : :. ...
NP_005 GFFFGYTPAVWGVVLNQAFGGLLVAVVVKYADNILKGFATSLSIVLSTVASIRLFGFHVD
270 280 290 300 310 320
310 320
pF1KE6 AAFFL-ATLLIGLAMRLYYGSR
: : : :.:: :. ::
NP_005 PLFALGAGLVIG-AVYLYSLPRGAAKAIASASASASGPCVHQQPPGQPPPPQLSSHRGDL
330 340 350 360 370 380
>>NP_001269579 (OMIM: 300896,314375) UDP-galactose trans (406 aa)
initn: 290 init1: 123 opt: 295 Z-score: 332.2 bits: 70.1 E(85289): 9.1e-12
Smith-Waterman score: 295; 30.6% identity (59.0% similar) in 288 aa overlap (48-320:78-351)
20 30 40 50 60 70
pF1KE6 RWTLMLLLSTAMYGAHAPLLALCHVDGRVPFRPSSAVLLTELTKLLLCAFSLLVGWQAWP
: ..::...:. : : : . :.. ..
NP_001 LKYISLAVLVVQNASLILSIRYARTLPGDRFFATTAVVMAEVLKGLTCLLLLFAQKRGNV
50 60 70 80 90 100
80 90 100 110 120
pF1KE6 QGPPPWRQAA---------PFALSALLYGANNNLVIYLQRYMDPSTYQVLSNLKIGSTAV
. . . : .:. .:.: .::: . .:.:: .::: .::.
NP_001 KHLVLFLHEAVLVQYVDTLKLAVPSLIYTLQNNLQYVAISNLPAATFQVTYQLKILTTAL
110 120 130 140 150 160
130 140 150 160 170 180
pF1KE6 LYCLCLRHRLSVRQGLALLLLMAAGACYAAGGLQVPGNTLPSPPPAAAASPMPLHITP-L
. : : . :: : .::::.. : .. . :....: :: .:
NP_001 FSVLMLNRSLSRLQWASLLLLFT-------------GVAIVQAQQAGGGGPRPLDQNPGA
170 180 190 200 210
190 200 210 220 230 240
pF1KE6 GLLLLILYCLISGLSSVYTELLMKRQRLPLALQNLFLYTFGVLLNL-GLHAGGGSGP---
:: .. :: ::...:: : ..: . . :.:: : ::. :.: :: . :..
NP_001 GLAAVVASCLSSGFAGVYFEKILKGSSGSVWLRNLQLGLFGTALGLVGLWWAEGTAVATR
220 230 240 250 260 270
250 260 270 280 290 300
pF1KE6 GLLEGFSGWAALVVLSQALNGLLMSAVMKHGSSITRLFVVSCSLVVNAVLSAVLLRLQLT
:.. :.. . :::.::..:::...:.:....: . :..: :.:...: : :. ...
NP_001 GFFFGYTPAVWGVVLNQAFGGLLVAVVVKYADNILKGFATSLSIVLSTVASIRLFGFHVD
280 290 300 310 320 330
310 320
pF1KE6 AAFFL-ATLLIGLAMRLYYGSR
: : : :.:: :. ::
NP_001 PLFALGAGLVIG-AVYLYSLPRGAAKAIASASASASGPCVHQQPPGQPPPPQLSSHRGDL
340 350 360 370 380 390
>>NP_001269580 (OMIM: 300896,314375) UDP-galactose trans (421 aa)
initn: 280 init1: 113 opt: 295 Z-score: 332.0 bits: 70.1 E(85289): 9.4e-12
Smith-Waterman score: 295; 30.6% identity (59.0% similar) in 288 aa overlap (48-320:93-366)
20 30 40 50 60 70
pF1KE6 RWTLMLLLSTAMYGAHAPLLALCHVDGRVPFRPSSAVLLTELTKLLLCAFSLLVGWQAWP
: ..::...:. : : : . :.. ..
NP_001 LKYISLAVLVVQNASLILSIRYARTLPGDRFFATTAVVMAEVLKGLTCLLLLFAQKRGNV
70 80 90 100 110 120
80 90 100 110 120
pF1KE6 QGPPPWRQAA---------PFALSALLYGANNNLVIYLQRYMDPSTYQVLSNLKIGSTAV
. . . : .:. .:.: .::: . .:.:: .::: .::.
NP_001 KHLVLFLHEAVLVQYVDTLKLAVPSLIYTLQNNLQYVAISNLPAATFQVTYQLKILTTAL
130 140 150 160 170 180
130 140 150 160 170 180
pF1KE6 LYCLCLRHRLSVRQGLALLLLMAAGACYAAGGLQVPGNTLPSPPPAAAASPMPLHITP-L
. : : . :: : .::::.. : .. . :....: :: .:
NP_001 FSVLMLNRSLSRLQWASLLLLFT-------------GVAIVQAQQAGGGGPRPLDQNPGA
190 200 210 220
190 200 210 220 230 240
pF1KE6 GLLLLILYCLISGLSSVYTELLMKRQRLPLALQNLFLYTFGVLLNL-GLHAGGGSGP---
:: .. :: ::...:: : ..: . . :.:: : ::. :.: :: . :..
NP_001 GLAAVVASCLSSGFAGVYFEKILKGSSGSVWLRNLQLGLFGTALGLVGLWWAEGTAVATR
230 240 250 260 270 280
250 260 270 280 290 300
pF1KE6 GLLEGFSGWAALVVLSQALNGLLMSAVMKHGSSITRLFVVSCSLVVNAVLSAVLLRLQLT
:.. :.. . :::.::..:::...:.:....: . :..: :.:...: : :. ...
NP_001 GFFFGYTPAVWGVVLNQAFGGLLVAVVVKYADNILKGFATSLSIVLSTVASIRLFGFHVD
290 300 310 320 330 340
310 320
pF1KE6 AAFFL-ATLLIGLAMRLYYGSR
: : : :.:: :. ::
NP_001 PLFALGAGLVIG-AVYLYSLPRGAAKAIASASASASGPCVHQQPPGQPPPPQLSSHRGDL
350 360 370 380 390 400
>>XP_016856361 (OMIM: 605632,615553) PREDICTED: UDP-N-ac (195 aa)
initn: 209 init1: 130 opt: 250 Z-score: 286.6 bits: 60.6 E(85289): 3.2e-09
Smith-Waterman score: 250; 29.2% identity (67.2% similar) in 192 aa overlap (134-320:2-182)
110 120 130 140 150 160
pF1KE6 IYLQRYMDPSTYQVLSNLKIGSTAVLYCLCLRHRLSVRQGLALLLLMAAGACYAAGGLQV
: ..:.: : :.:..::. :. . .:
XP_016 MLSKKLGVYQWLSLVILMT-GVAF----VQW
10 20
170 180 190 200 210 220
pF1KE6 PGNTLPSPPPAAAASPMPLHITPLGLLLLILYCLISGLSSVYTELLMKRQRLPLALQNLF
:... . .:.: . .::. .. :. ::...:: : ..:. . . ..:.
XP_016 PSDSQLDSKELSAGSQF------VGLMAVLTACFSSGFAGVYFEKILKETKQSVWIRNIQ
30 40 50 60 70 80
230 240 250 260 270
pF1KE6 LYTFGVLLNL-GLHAGGG---SGPGLLEGFSGWAALVVLSQALNGLLMSAVMKHGSSITR
: :: ...: :.. : : :...:.. . .::. :::.::...::.:....: .
XP_016 LGFFGSIFGLMGVYIYDGELVSKNGFFQGYNRLTWIVVVLQALGGLVIAAVIKYADNILK
90 100 110 120 130 140
280 290 300 310 320
pF1KE6 LFVVSCSLVVNAVLSAVLLR-LQLTAAFFLATLLIGLAMRLYYGSR
:..: :.......: :. . :..:::...:. : ::
XP_016 GFATSLSIILSTLISYFWLQDFVPTSVFFLGAILVITATFLYGYDPKPAGNPTKA
150 160 170 180 190
324 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 12:27:21 2016 done: Tue Nov 8 12:27:22 2016
Total Scan time: 6.710 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]