Result of FASTA (ccds) for
pFN21AE6350
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE6350, 351 aa
1>>>pF1KE6350 351 - 351 aa - 351 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.3923+/-0.000891; mu= 16.5685+/- 0.054
mean_var=81.2250+/-15.882, 0's: 0 Z-trim(107.2): 11 B-trim: 0 in 0/51
Lambda= 0.142308
statistics sampled from 9431 (9436) to 9431 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.657), E-opt: 0.2 (0.29), width: 16
Scan time: 2.470
The best scores are: opt bits E(32554)
CCDS5509.1 ZPBP gene_id:11055|Hs108|chr7 ( 351) 2377 497.7 6.2e-141
CCDS55110.1 ZPBP gene_id:11055|Hs108|chr7 ( 350) 2360 494.2 7e-140
CCDS11352.1 ZPBP2 gene_id:124626|Hs108|chr17 ( 338) 730 159.5 3.7e-39
CCDS11353.2 ZPBP2 gene_id:124626|Hs108|chr17 ( 316) 701 153.5 2.2e-37
>>CCDS5509.1 ZPBP gene_id:11055|Hs108|chr7 (351 aa)
initn: 2377 init1: 2377 opt: 2377 Z-score: 2643.7 bits: 497.7 E(32554): 6.2e-141
Smith-Waterman score: 2377; 100.0% identity (100.0% similar) in 351 aa overlap (1-351:1-351)
10 20 30 40 50 60
pF1KE6 MEAFALGPARRGRRRTRAAGSLLSRAAILLFISAFLVRVPSSVGHLVRLPRAFRLTKDSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 MEAFALGPARRGRRRTRAAGSLLSRAAILLFISAFLVRVPSSVGHLVRLPRAFRLTKDSV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 KIVGSTSFPVKAYVMLHQKSPHVLCVTQQLRNAELIDPSFQWYGPKGKVVSVENRTAQIT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 KIVGSTSFPVKAYVMLHQKSPHVLCVTQQLRNAELIDPSFQWYGPKGKVVSVENRTAQIT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 STGSLVFQNFEESMSGIYTCFLEYKPTVEEIVKRLQLKYAIYAYREPHYYYQFTARYHAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 STGSLVFQNFEESMSGIYTCFLEYKPTVEEIVKRLQLKYAIYAYREPHYYYQFTARYHAA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 PCNSIYNISFEKKLLQILSKLLLDLSCEISLLKSECHRVKMQRAGLQNELFFAFSVSSLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 PCNSIYNISFEKKLLQILSKLLLDLSCEISLLKSECHRVKMQRAGLQNELFFAFSVSSLD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE6 TEKGPKRCTDHNCEPYKRLFKAKNLIERFFNQQVEILGRRAEQLPQIYYIEGTLQMVWIN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 TEKGPKRCTDHNCEPYKRLFKAKNLIERFFNQQVEILGRRAEQLPQIYYIEGTLQMVWIN
250 260 270 280 290 300
310 320 330 340 350
pF1KE6 RCFPGYGMNVQQHPKCPECCVICSPGSYNPRDGIHCLQCNSSLVYGAKTCL
:::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 RCFPGYGMNVQQHPKCPECCVICSPGSYNPRDGIHCLQCNSSLVYGAKTCL
310 320 330 340 350
>>CCDS55110.1 ZPBP gene_id:11055|Hs108|chr7 (350 aa)
initn: 1653 init1: 1653 opt: 2360 Z-score: 2624.8 bits: 494.2 E(32554): 7e-140
Smith-Waterman score: 2360; 99.7% identity (99.7% similar) in 351 aa overlap (1-351:1-350)
10 20 30 40 50 60
pF1KE6 MEAFALGPARRGRRRTRAAGSLLSRAAILLFISAFLVRVPSSVGHLVRLPRAFRLTKDSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 MEAFALGPARRGRRRTRAAGSLLSRAAILLFISAFLVRVPSSVGHLVRLPRAFRLTKDSV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 KIVGSTSFPVKAYVMLHQKSPHVLCVTQQLRNAELIDPSFQWYGPKGKVVSVENRTAQIT
::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::
CCDS55 KIVGSTSFPVKAYVMLHQKSPHVLCVTQQLRNAELIDPSFQWYGPKGKVVS-ENRTAQIT
70 80 90 100 110
130 140 150 160 170 180
pF1KE6 STGSLVFQNFEESMSGIYTCFLEYKPTVEEIVKRLQLKYAIYAYREPHYYYQFTARYHAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 STGSLVFQNFEESMSGIYTCFLEYKPTVEEIVKRLQLKYAIYAYREPHYYYQFTARYHAA
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE6 PCNSIYNISFEKKLLQILSKLLLDLSCEISLLKSECHRVKMQRAGLQNELFFAFSVSSLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 PCNSIYNISFEKKLLQILSKLLLDLSCEISLLKSECHRVKMQRAGLQNELFFAFSVSSLD
180 190 200 210 220 230
250 260 270 280 290 300
pF1KE6 TEKGPKRCTDHNCEPYKRLFKAKNLIERFFNQQVEILGRRAEQLPQIYYIEGTLQMVWIN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 TEKGPKRCTDHNCEPYKRLFKAKNLIERFFNQQVEILGRRAEQLPQIYYIEGTLQMVWIN
240 250 260 270 280 290
310 320 330 340 350
pF1KE6 RCFPGYGMNVQQHPKCPECCVICSPGSYNPRDGIHCLQCNSSLVYGAKTCL
:::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 RCFPGYGMNVQQHPKCPECCVICSPGSYNPRDGIHCLQCNSSLVYGAKTCL
300 310 320 330 340 350
>>CCDS11352.1 ZPBP2 gene_id:124626|Hs108|chr17 (338 aa)
initn: 631 init1: 253 opt: 730 Z-score: 816.4 bits: 159.5 E(32554): 3.7e-39
Smith-Waterman score: 730; 37.7% identity (66.8% similar) in 313 aa overlap (47-350:18-326)
20 30 40 50 60 70
pF1KE6 RAAGSLLSRAAILLFISAFLVRVPSSVGHLVRLPRAFRLTKDSVKIVGSTSFPVKAYVML
:. :: : : . . : :.:. : : :: :
CCDS11 MMRTCVLLSAVLWCLTGVQCPR-FTLFNKKGFIYGKTGQPDKIYVEL
10 20 30 40
80 90 100 110 120 130
pF1KE6 HQKSPHVLCVTQQLRNAELIDPSFQWYGPKGKVVSVENRTAQITSTGSLVFQNFEESMSG
::.:: ..:. .: . :..::.. : ::. :... .:: .:: ::.:. ..: : .::
CCDS11 HQNSPVLICMDFKLSKKEIVDPTYLWIGPNEKTLTGNNRI-NITETGQLMVKDFLEPLSG
50 60 70 80 90 100
140 150 160 170 180 190
pF1KE6 IYTCFLEYKP----TVEEIVKRLQLKYAIYAYREPHYYYQFTARYHAAPCNSIYNISFEK
.::: : :: : :: . . . . ..::::: : ::...:. . : . :: : .
CCDS11 LYTCTLSYKTVKAETQEEKTVKKRYDFMVFAYREPDYSYQMAVRFTTRSCIGRYNDVFFR
110 120 130 140 150 160
200 210 220 230 240 250
pF1KE6 KLLQILSKLLLDLSCEISLLKSECHRVKMQRAGLQNELFFAFSVSSLDTE-KGPKRCTDH
: .::..:. ::::.. . .:: :.. . :: .:::.::.:. . :: :.
CCDS11 VLKKILDSLISDLSCHVIEPSYKCHSVEIPEHGLIHELFIAFQVNPFAPGWKGA--CNGS
170 180 190 200 210 220
260 270 280 290 300
pF1KE6 -NCEPY--KRLFKAKNLIERFFNQQVEILGRRAEQ-LPQIYYIEGTLQMVWINRCFPGYG
.:: . ...:.. :: :: .:. :. . .. :: ..... .::.: .. : ::.:
CCDS11 VDCEDTTNHNILQARDRIEDFFRSQAYIFYHNFNKTLPAMHFVDHSLQVVRLDSCRPGFG
230 240 250 260 270 280
310 320 330 340 350
pF1KE6 MNVQQHPKCPECCVICSPGSYNPRDGIHCLQCNSSLVYGAKTCL
: . : .: :::.:::....: .. : : : :.::::.:
CCDS11 KNERLHSNCASCCVVCSPATFSPDVNVTCQTCVSVLTYGAKSCPQTSNKNQQYED
290 300 310 320 330
>>CCDS11353.2 ZPBP2 gene_id:124626|Hs108|chr17 (316 aa)
initn: 612 init1: 253 opt: 701 Z-score: 784.6 bits: 153.5 E(32554): 2.2e-37
Smith-Waterman score: 701; 37.7% identity (67.5% similar) in 289 aa overlap (71-350:19-304)
50 60 70 80 90 100
pF1KE6 SSVGHLVRLPRAFRLTKDSVKIVGSTSFPVKAYVMLHQKSPHVLCVTQQLRNAELIDPSF
: :: :::.:: ..:. .: . :..::..
CCDS11 MMRTCVLLSAVLWCLTGDKIYVELHQNSPVLICMDFKLSKKEIVDPTY
10 20 30 40
110 120 130 140 150
pF1KE6 QWYGPKGKVVSVENRTAQITSTGSLVFQNFEESMSGIYTCFLEYKP----TVEEIVKRLQ
: ::. :... .:: .:: ::.:. ..: : .::.::: : :: : :: . . .
CCDS11 LWIGPNEKTLTGNNRI-NITETGQLMVKDFLEPLSGLYTCTLSYKTVKAETQEEKTVKKR
50 60 70 80 90 100
160 170 180 190 200 210
pF1KE6 LKYAIYAYREPHYYYQFTARYHAAPCNSIYNISFEKKLLQILSKLLLDLSCEISLLKSEC
. ..::::: : ::...:. . : . :: : . : .::..:. ::::.. . .:
CCDS11 YDFMVFAYREPDYSYQMAVRFTTRSCIGRYNDVFFRVLKKILDSLISDLSCHVIEPSYKC
110 120 130 140 150 160
220 230 240 250 260 270
pF1KE6 HRVKMQRAGLQNELFFAFSVSSLDTE-KGPKRCTDH-NCEPY--KRLFKAKNLIERFFNQ
: :.. . :: .:::.::.:. . :: :. .:: . ...:.. :: :: .
CCDS11 HSVEIPEHGLIHELFIAFQVNPFAPGWKGA--CNGSVDCEDTTNHNILQARDRIEDFFRS
170 180 190 200 210 220
280 290 300 310 320 330
pF1KE6 QVEILGRRAEQ-LPQIYYIEGTLQMVWINRCFPGYGMNVQQHPKCPECCVICSPGSYNPR
:. :. . .. :: ..... .::.: .. : ::.: : . : .: :::.:::....:
CCDS11 QAYIFYHNFNKTLPAMHFVDHSLQVVRLDSCRPGFGKNERLHSNCASCCVVCSPATFSPD
230 240 250 260 270 280
340 350
pF1KE6 DGIHCLQCNSSLVYGAKTCL
.. : : : :.::::.:
CCDS11 VNVTCQTCVSVLTYGAKSCPQTSNKNQQYED
290 300 310
351 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 12:22:07 2016 done: Tue Nov 8 12:22:08 2016
Total Scan time: 2.470 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]