Result of FASTA (omim) for
pFN21AE6347
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE6347, 327 aa
1>>>pF1KE6347 327 - 327 aa - 327 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.7873+/-0.000343; mu= 18.6350+/- 0.021
mean_var=64.6297+/-12.582, 0's: 0 Z-trim(114.9): 90 B-trim: 0 in 0/49
Lambda= 0.159536
statistics sampled from 24906 (25001) to 24906 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.674), E-opt: 0.2 (0.293), width: 16
Scan time: 5.750
The best scores are: opt bits E(85289)
NP_003593 (OMIM: 604839) inactive peptidyl-prolyl ( 327) 2200 515.0 8.5e-146
NP_001128683 (OMIM: 604839) inactive peptidyl-prol ( 322) 2078 486.9 2.4e-137
XP_016868230 (OMIM: 604839) PREDICTED: inactive pe ( 317) 2025 474.7 1.1e-133
XP_016868231 (OMIM: 604839) PREDICTED: inactive pe ( 266) 1616 380.5 2.1e-105
NP_001268233 (OMIM: 604839) inactive peptidyl-prol ( 297) 1616 380.5 2.3e-105
XP_006716216 (OMIM: 604839) PREDICTED: inactive pe ( 282) 930 222.6 7.5e-58
NP_001139249 (OMIM: 602623,608516) peptidyl-prolyl ( 268) 280 73.0 7.8e-13
NP_001139247 (OMIM: 602623,608516) peptidyl-prolyl ( 457) 280 73.2 1.2e-12
NP_004108 (OMIM: 602623,608516) peptidyl-prolyl ci ( 457) 280 73.2 1.2e-12
NP_001139248 (OMIM: 602623,608516) peptidyl-prolyl ( 457) 280 73.2 1.2e-12
NP_002005 (OMIM: 600611) peptidyl-prolyl cis-trans ( 459) 262 69.1 2.1e-11
NP_001295302 (OMIM: 604840) peptidyl-prolyl cis-tr ( 412) 237 63.3 1e-09
XP_011526165 (OMIM: 604840) PREDICTED: peptidyl-pr ( 413) 228 61.2 4.4e-09
NP_036313 (OMIM: 604840) peptidyl-prolyl cis-trans ( 413) 228 61.2 4.4e-09
NP_463460 (OMIM: 186945) peptidyl-prolyl cis-trans ( 108) 217 58.2 9e-09
NP_000792 (OMIM: 186945) peptidyl-prolyl cis-trans ( 108) 217 58.2 9e-09
NP_004107 (OMIM: 600620) peptidyl-prolyl cis-trans ( 108) 212 57.1 2e-08
XP_011519231 (OMIM: 600611) PREDICTED: peptidyl-pr ( 414) 218 58.9 2.2e-08
XP_016859082 (OMIM: 600620) PREDICTED: peptidyl-pr ( 79) 185 50.7 1.2e-06
NP_001309892 (OMIM: 600620) peptidyl-prolyl cis-tr ( 79) 185 50.7 1.2e-06
XP_016859084 (OMIM: 600620) PREDICTED: peptidyl-pr ( 79) 185 50.7 1.2e-06
XP_016859083 (OMIM: 600620) PREDICTED: peptidyl-pr ( 79) 185 50.7 1.2e-06
NP_001309893 (OMIM: 600620) peptidyl-prolyl cis-tr ( 79) 185 50.7 1.2e-06
XP_016859085 (OMIM: 600620) PREDICTED: peptidyl-pr ( 79) 185 50.7 1.2e-06
XP_011526166 (OMIM: 604840) PREDICTED: peptidyl-pr ( 383) 192 52.9 1.3e-06
NP_001128680 (OMIM: 186946) peptidyl-prolyl cis-tr ( 142) 176 48.9 7.7e-06
NP_004461 (OMIM: 186946) peptidyl-prolyl cis-trans ( 142) 176 48.9 7.7e-06
XP_005273905 (OMIM: 186946) PREDICTED: peptidyl-pr ( 142) 176 48.9 7.7e-06
NP_476433 (OMIM: 186946) peptidyl-prolyl cis-trans ( 142) 176 48.9 7.7e-06
NP_005029 (OMIM: 601753) peptidyl-prolyl cis-trans ( 370) 177 49.4 1.4e-05
NP_068758 (OMIM: 259450,607063,610968) peptidyl-pr ( 582) 175 49.1 2.7e-05
XP_011523401 (OMIM: 259450,607063,610968) PREDICTE ( 601) 175 49.1 2.7e-05
XP_011534867 (OMIM: 186947) PREDICTED: peptidyl-pr ( 191) 168 47.1 3.5e-05
NP_002004 (OMIM: 186947) peptidyl-prolyl cis-trans ( 224) 168 47.2 3.9e-05
NP_057678 (OMIM: 610571) peptidyl-prolyl cis-trans ( 201) 159 45.1 0.00015
XP_011523402 (OMIM: 259450,607063,610968) PREDICTE ( 510) 159 45.4 0.00031
NP_060416 (OMIM: 614505,614557) peptidyl-prolyl ci ( 211) 149 42.8 0.00078
NP_001128684 (OMIM: 607062) peptidyl-prolyl cis-tr ( 221) 149 42.8 0.0008
NP_001271272 (OMIM: 616257) peptidyl-prolyl cis-tr ( 338) 145 42.0 0.0021
NP_001271270 (OMIM: 616257) peptidyl-prolyl cis-tr ( 623) 145 42.2 0.0034
NP_851939 (OMIM: 607062) peptidyl-prolyl cis-trans ( 222) 139 40.5 0.004
XP_011513417 (OMIM: 616257) PREDICTED: peptidyl-pr ( 359) 138 40.4 0.0067
NP_009201 (OMIM: 616257) peptidyl-prolyl cis-trans ( 570) 138 40.6 0.0096
>>NP_003593 (OMIM: 604839) inactive peptidyl-prolyl cis- (327 aa)
initn: 2200 init1: 2200 opt: 2200 Z-score: 2738.5 bits: 515.0 E(85289): 8.5e-146
Smith-Waterman score: 2200; 100.0% identity (100.0% similar) in 327 aa overlap (1-327:1-327)
10 20 30 40 50 60
pF1KE6 MGGSALNQGVLEGDDAPGQSLYERLSQRMLDISGDRGVLKDVIREGAGDLVAPDASVLVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 MGGSALNQGVLEGDDAPGQSLYERLSQRMLDISGDRGVLKDVIREGAGDLVAPDASVLVK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 YSGYLEHMDRPFDSNYFRKTPRLMKLGEDITLWGMELGLLSMRRGELARFLFKPNYAYGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 YSGYLEHMDRPFDSNYFRKTPRLMKLGEDITLWGMELGLLSMRRGELARFLFKPNYAYGT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 LGCPPLIPPNTTVLFEIELLDFLDCAESDKFCALSAEQQDQFPLQKVLKVAATEREFGNY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 LGCPPLIPPNTTVLFEIELLDFLDCAESDKFCALSAEQQDQFPLQKVLKVAATEREFGNY
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 LFRQNRFYDAKVRYKRALLLLRRRSAPPEEQHLVEAAKLPVLLNLSFTYLKLDRPTIALC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 LFRQNRFYDAKVRYKRALLLLRRRSAPPEEQHLVEAAKLPVLLNLSFTYLKLDRPTIALC
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE6 YGEQALIIDQKNAKALFRCGQACLLLTEYQKARDFLVRAQKEQPFNHDINNELKKLASCY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 YGEQALIIDQKNAKALFRCGQACLLLTEYQKARDFLVRAQKEQPFNHDINNELKKLASCY
250 260 270 280 290 300
310 320
pF1KE6 RDYVDKEKEMWHRMFAPCGDGSTAGES
:::::::::::::::::::::::::::
NP_003 RDYVDKEKEMWHRMFAPCGDGSTAGES
310 320
>>NP_001128683 (OMIM: 604839) inactive peptidyl-prolyl c (322 aa)
initn: 2078 init1: 2078 opt: 2078 Z-score: 2586.8 bits: 486.9 E(85289): 2.4e-137
Smith-Waterman score: 2078; 99.4% identity (99.7% similar) in 311 aa overlap (17-327:12-322)
10 20 30 40 50 60
pF1KE6 MGGSALNQGVLEGDDAPGQSLYERLSQRMLDISGDRGVLKDVIREGAGDLVAPDASVLVK
: .:::::::::::::::::::::::::::::::::::::::::
NP_001 MSASSWPQNGMPPSSLYERLSQRMLDISGDRGVLKDVIREGAGDLVAPDASVLVK
10 20 30 40 50
70 80 90 100 110 120
pF1KE6 YSGYLEHMDRPFDSNYFRKTPRLMKLGEDITLWGMELGLLSMRRGELARFLFKPNYAYGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YSGYLEHMDRPFDSNYFRKTPRLMKLGEDITLWGMELGLLSMRRGELARFLFKPNYAYGT
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE6 LGCPPLIPPNTTVLFEIELLDFLDCAESDKFCALSAEQQDQFPLQKVLKVAATEREFGNY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LGCPPLIPPNTTVLFEIELLDFLDCAESDKFCALSAEQQDQFPLQKVLKVAATEREFGNY
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE6 LFRQNRFYDAKVRYKRALLLLRRRSAPPEEQHLVEAAKLPVLLNLSFTYLKLDRPTIALC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LFRQNRFYDAKVRYKRALLLLRRRSAPPEEQHLVEAAKLPVLLNLSFTYLKLDRPTIALC
180 190 200 210 220 230
250 260 270 280 290 300
pF1KE6 YGEQALIIDQKNAKALFRCGQACLLLTEYQKARDFLVRAQKEQPFNHDINNELKKLASCY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YGEQALIIDQKNAKALFRCGQACLLLTEYQKARDFLVRAQKEQPFNHDINNELKKLASCY
240 250 260 270 280 290
310 320
pF1KE6 RDYVDKEKEMWHRMFAPCGDGSTAGES
:::::::::::::::::::::::::::
NP_001 RDYVDKEKEMWHRMFAPCGDGSTAGES
300 310 320
>>XP_016868230 (OMIM: 604839) PREDICTED: inactive peptid (317 aa)
initn: 1221 init1: 1163 opt: 2025 Z-score: 2521.0 bits: 474.7 E(85289): 1.1e-133
Smith-Waterman score: 2025; 97.7% identity (98.1% similar) in 311 aa overlap (17-327:12-317)
10 20 30 40 50 60
pF1KE6 MGGSALNQGVLEGDDAPGQSLYERLSQRMLDISGDRGVLKDVIREGAGDLVAPDASVLVK
: .:::::::::::::::::::::::::::::::::::::::::
XP_016 MSASSWPQNGMPPSSLYERLSQRMLDISGDRGVLKDVIREGAGDLVAPDASVLVK
10 20 30 40 50
70 80 90 100 110 120
pF1KE6 YSGYLEHMDRPFDSNYFRKTPRLMKLGEDITLWGMELGLLSMRRGELARFLFKPNYAYGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YSGYLEHMDRPFDSNYFRKTPRLMKLGEDITLWGMELGLLSMRRGELARFLFKPNYAYGT
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE6 LGCPPLIPPNTTVLFEIELLDFLDCAESDKFCALSAEQQDQFPLQKVLKVAATEREFGNY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LGCPPLIPPNTTVLFEIELLDFLDCAESDKFCALSAEQQDQFPLQKVLKVAATEREFGNY
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE6 LFRQNRFYDAKVRYKRALLLLRRRSAPPEEQHLVEAAKLPVLLNLSFTYLKLDRPTIALC
::::::::::: ::::::::::::::::::::::::::::::::::::::::::::
XP_016 LFRQNRFYDAK-----ALLLLRRRSAPPEEQHLVEAAKLPVLLNLSFTYLKLDRPTIALC
180 190 200 210 220 230
250 260 270 280 290 300
pF1KE6 YGEQALIIDQKNAKALFRCGQACLLLTEYQKARDFLVRAQKEQPFNHDINNELKKLASCY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YGEQALIIDQKNAKALFRCGQACLLLTEYQKARDFLVRAQKEQPFNHDINNELKKLASCY
240 250 260 270 280 290
310 320
pF1KE6 RDYVDKEKEMWHRMFAPCGDGSTAGES
:::::::::::::::::::::::::::
XP_016 RDYVDKEKEMWHRMFAPCGDGSTAGES
300 310
>>XP_016868231 (OMIM: 604839) PREDICTED: inactive peptid (266 aa)
initn: 1616 init1: 1616 opt: 1616 Z-score: 2013.3 bits: 380.5 E(85289): 2.1e-105
Smith-Waterman score: 1616; 99.2% identity (99.6% similar) in 245 aa overlap (17-261:12-256)
10 20 30 40 50 60
pF1KE6 MGGSALNQGVLEGDDAPGQSLYERLSQRMLDISGDRGVLKDVIREGAGDLVAPDASVLVK
: .:::::::::::::::::::::::::::::::::::::::::
XP_016 MSASSWPQNGMPPSSLYERLSQRMLDISGDRGVLKDVIREGAGDLVAPDASVLVK
10 20 30 40 50
70 80 90 100 110 120
pF1KE6 YSGYLEHMDRPFDSNYFRKTPRLMKLGEDITLWGMELGLLSMRRGELARFLFKPNYAYGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YSGYLEHMDRPFDSNYFRKTPRLMKLGEDITLWGMELGLLSMRRGELARFLFKPNYAYGT
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE6 LGCPPLIPPNTTVLFEIELLDFLDCAESDKFCALSAEQQDQFPLQKVLKVAATEREFGNY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LGCPPLIPPNTTVLFEIELLDFLDCAESDKFCALSAEQQDQFPLQKVLKVAATEREFGNY
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE6 LFRQNRFYDAKVRYKRALLLLRRRSAPPEEQHLVEAAKLPVLLNLSFTYLKLDRPTIALC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LFRQNRFYDAKVRYKRALLLLRRRSAPPEEQHLVEAAKLPVLLNLSFTYLKLDRPTIALC
180 190 200 210 220 230
250 260 270 280 290 300
pF1KE6 YGEQALIIDQKNAKALFRCGQACLLLTEYQKARDFLVRAQKEQPFNHDINNELKKLASCY
:::::::::::::::::::::
XP_016 YGEQALIIDQKNAKALFRCGQFSPWDRLVFS
240 250 260
>>NP_001268233 (OMIM: 604839) inactive peptidyl-prolyl c (297 aa)
initn: 1977 init1: 1616 opt: 1616 Z-score: 2012.6 bits: 380.5 E(85289): 2.3e-105
Smith-Waterman score: 1921; 90.8% identity (90.8% similar) in 327 aa overlap (1-327:1-297)
10 20 30 40 50 60
pF1KE6 MGGSALNQGVLEGDDAPGQSLYERLSQRMLDISGDRGVLKDVIREGAGDLVAPDASVLVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGGSALNQGVLEGDDAPGQSLYERLSQRMLDISGDRGVLKDVIREGAGDLVAPDASVL--
10 20 30 40 50
70 80 90 100 110 120
pF1KE6 YSGYLEHMDRPFDSNYFRKTPRLMKLGEDITLWGMELGLLSMRRGELARFLFKPNYAYGT
::::::::::::::::::::::::::::::::
NP_001 ----------------------------DITLWGMELGLLSMRRGELARFLFKPNYAYGT
60 70 80 90
130 140 150 160 170 180
pF1KE6 LGCPPLIPPNTTVLFEIELLDFLDCAESDKFCALSAEQQDQFPLQKVLKVAATEREFGNY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LGCPPLIPPNTTVLFEIELLDFLDCAESDKFCALSAEQQDQFPLQKVLKVAATEREFGNY
100 110 120 130 140 150
190 200 210 220 230 240
pF1KE6 LFRQNRFYDAKVRYKRALLLLRRRSAPPEEQHLVEAAKLPVLLNLSFTYLKLDRPTIALC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LFRQNRFYDAKVRYKRALLLLRRRSAPPEEQHLVEAAKLPVLLNLSFTYLKLDRPTIALC
160 170 180 190 200 210
250 260 270 280 290 300
pF1KE6 YGEQALIIDQKNAKALFRCGQACLLLTEYQKARDFLVRAQKEQPFNHDINNELKKLASCY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YGEQALIIDQKNAKALFRCGQACLLLTEYQKARDFLVRAQKEQPFNHDINNELKKLASCY
220 230 240 250 260 270
310 320
pF1KE6 RDYVDKEKEMWHRMFAPCGDGSTAGES
:::::::::::::::::::::::::::
NP_001 RDYVDKEKEMWHRMFAPCGDGSTAGES
280 290
>>XP_006716216 (OMIM: 604839) PREDICTED: inactive peptid (282 aa)
initn: 1798 init1: 930 opt: 930 Z-score: 1159.6 bits: 222.6 E(85289): 7.5e-58
Smith-Waterman score: 1722; 86.5% identity (86.8% similar) in 311 aa overlap (17-327:12-282)
10 20 30 40 50 60
pF1KE6 MGGSALNQGVLEGDDAPGQSLYERLSQRMLDISGDRGVLKDVIREGAGDLVAPDASVLVK
: .:::::::::::::::::::::::::::::::::::::::::
XP_006 MSASSWPQNGMPPSSLYERLSQRMLDISGDRGVLKDVIREGAGDLVAPDASVLVK
10 20 30 40 50
70 80 90 100 110 120
pF1KE6 YSGYLEHMDRPFDSNYFRKTPRLMKLGEDITLWGMELGLLSMRRGELARFLFKPNYAYGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 YSGYLEHMDRPFDSNYFRKTPRLMKLGEDITLWGMELGLLSMRRGELARFLFKPNYAYGT
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE6 LGCPPLIPPNTTVLFEIELLDFLDCAESDKFCALSAEQQDQFPLQKVLKVAATEREFGNY
::::::::::::::::::::::::::::::::::::
XP_006 LGCPPLIPPNTTVLFEIELLDFLDCAESDKFCALSA------------------------
120 130 140 150
190 200 210 220 230 240
pF1KE6 LFRQNRFYDAKVRYKRALLLLRRRSAPPEEQHLVEAAKLPVLLNLSFTYLKLDRPTIALC
::::::::::::::::::::::::::::::::::::::::::::
XP_006 ----------------ALLLLRRRSAPPEEQHLVEAAKLPVLLNLSFTYLKLDRPTIALC
160 170 180 190
250 260 270 280 290 300
pF1KE6 YGEQALIIDQKNAKALFRCGQACLLLTEYQKARDFLVRAQKEQPFNHDINNELKKLASCY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 YGEQALIIDQKNAKALFRCGQACLLLTEYQKARDFLVRAQKEQPFNHDINNELKKLASCY
200 210 220 230 240 250
310 320
pF1KE6 RDYVDKEKEMWHRMFAPCGDGSTAGES
:::::::::::::::::::::::::::
XP_006 RDYVDKEKEMWHRMFAPCGDGSTAGES
260 270 280
>>NP_001139249 (OMIM: 602623,608516) peptidyl-prolyl cis (268 aa)
initn: 248 init1: 248 opt: 280 Z-score: 351.4 bits: 73.0 E(85289): 7.8e-13
Smith-Waterman score: 280; 37.9% identity (69.3% similar) in 140 aa overlap (7-142:4-137)
10 20 30 40 50
pF1KE6 MGGSALNQGVLEGDDAPGQSLYERLSQRMLDISG--DRGVLKDVIREGAGDLVAP--DAS
..:. .....: .. :. ::.. :::::: : : : :. . : .
NP_001 MTTDEGAKNNEESPTATVAEQGE----DITSKKDRGVLKIVKRVGNGEET-PMIGDK
10 20 30 40 50
60 70 80 90 100 110
pF1KE6 VLVKYSGYLEHMDRPFDSNYFRKTPRLMKLGEDITLWGMELGLLSMRRGELARFLFKPNY
: :.:.: : . . :::.. :. : ...::. .. . ..:. .:..::. ..: ::.:
NP_001 VYVHYKGKLSN-GKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKKGEICHLLCKPEY
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE6 AYGTLGCPPLIPPNTTVLFEIELLDFLDCAESDKFCALSAEQQDQFPLQKVLKVAATERE
:::. : : :: :.:..::::::::
NP_001 AYGSAGSLPKIPSNATLFFEIELLDFKGEDLFEDGGIIRRTKRKGEGYSNPNEGATVEIH
120 130 140 150 160 170
>>NP_001139247 (OMIM: 602623,608516) peptidyl-prolyl cis (457 aa)
initn: 382 init1: 248 opt: 280 Z-score: 348.2 bits: 73.2 E(85289): 1.2e-12
Smith-Waterman score: 282; 25.3% identity (57.3% similar) in 288 aa overlap (31-315:141-413)
10 20 30 40 50 60
pF1KE6 MGGSALNQGVLEGDDAPGQSLYERLSQRMLDISGDRGVLKDVIREGAGDLVAPDASVLVK
:. : :... . :.: : :. .. :.
NP_001 YAYGSAGSLPKIPSNATLFFEIELLDFKGEDLFEDGGIIRRTKRKGEG-YSNPNEGATVE
120 130 140 150 160
70 80 90 100 110
pF1KE6 YSGYLEHMDRPFDSNYFRKTPRLMKLGEDITL-WGMELGLLSMRRGELARFLFKPNYAYG
. : :: : . . ::: . :.. .: .:.: : . . : :..:
NP_001 IHLEGRCGGRMFDC---RDVAFTVGEGEDHDIPIGIDKALEKMQREEQCILYLGPRYGFG
170 180 190 200 210 220
120 130 140 150 160 170
pF1KE6 TLGCPPL-IPPNTTVLFEIELLDFLDCAESDKFCALSAEQQDQFPLQKVLKVAATEREFG
: : . : ::. ...:. : .: : : :.. . :.. :: .: :
NP_001 EAGKPKFGIEPNAELIYEVTLKSFEKAKE-------SWEMDTKEKLEQ----AAIVKEKG
230 240 250 260 270
180 190 200 210 220 230
pF1KE6 NYLFRQNRFYDAKVRYKRALLLLRRRSAPPE-EQHLVEAAKLPVLLNLSFTYLKLDRPTI
. :. .....: ..: . . :. . . : :.. :. : ..:::.. :::: . :
NP_001 TVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTK
280 290 300 310 320 330
240 250 260 270 280 290
pF1KE6 ALCYGEQALIIDQKNAKALFRCGQACLLLTEYQKARDFLVRAQKEQPFNHDINNELKKLA
:. ..:: .:. : :.:.: :.: ::..:...:. . .. . .: :. ...
NP_001 AVECCDKALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQISMCQ
340 350 360 370 380 390
300 310 320
pF1KE6 SCYRDYVDKEKEMWHRMFAPCGDGSTAGES
. ... ....... ::
NP_001 KKAKEHNERDRRIYANMFKKFAEQDAKEEANKAMGKKTSEGVTNEKGTDSQAMEEEKPEG
400 410 420 430 440 450
>--
initn: 382 init1: 248 opt: 280 Z-score: 348.2 bits: 73.2 E(85289): 1.2e-12
Smith-Waterman score: 280; 37.9% identity (69.3% similar) in 140 aa overlap (7-142:4-137)
10 20 30 40 50
pF1KE6 MGGSALNQGVLEGDDAPGQSLYERLSQRMLDISG--DRGVLKDVIREGAGDLVAP--DAS
..:. .....: .. :. ::.. :::::: : : : :. . : .
NP_001 MTTDEGAKNNEESPTATVAEQGE----DITSKKDRGVLKIVKRVGNGEET-PMIGDK
10 20 30 40 50
60 70 80 90 100 110
pF1KE6 VLVKYSGYLEHMDRPFDSNYFRKTPRLMKLGEDITLWGMELGLLSMRRGELARFLFKPNY
: :.:.: : . . :::.. :. : ...::. .. . ..:. .:..::. ..: ::.:
NP_001 VYVHYKGKLSN-GKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKKGEICHLLCKPEY
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE6 AYGTLGCPPLIPPNTTVLFEIELLDFLDCAESDKFCALSAEQQDQFPLQKVLKVAATERE
:::. : : :: :.:..::::::::
NP_001 AYGSAGSLPKIPSNATLFFEIELLDFKGEDLFEDGGIIRRTKRKGEGYSNPNEGATVEIH
120 130 140 150 160 170
>>NP_004108 (OMIM: 602623,608516) peptidyl-prolyl cis-tr (457 aa)
initn: 382 init1: 248 opt: 280 Z-score: 348.2 bits: 73.2 E(85289): 1.2e-12
Smith-Waterman score: 282; 25.3% identity (57.3% similar) in 288 aa overlap (31-315:141-413)
10 20 30 40 50 60
pF1KE6 MGGSALNQGVLEGDDAPGQSLYERLSQRMLDISGDRGVLKDVIREGAGDLVAPDASVLVK
:. : :... . :.: : :. .. :.
NP_004 YAYGSAGSLPKIPSNATLFFEIELLDFKGEDLFEDGGIIRRTKRKGEG-YSNPNEGATVE
120 130 140 150 160
70 80 90 100 110
pF1KE6 YSGYLEHMDRPFDSNYFRKTPRLMKLGEDITL-WGMELGLLSMRRGELARFLFKPNYAYG
. : :: : . . ::: . :.. .: .:.: : . . : :..:
NP_004 IHLEGRCGGRMFDC---RDVAFTVGEGEDHDIPIGIDKALEKMQREEQCILYLGPRYGFG
170 180 190 200 210 220
120 130 140 150 160 170
pF1KE6 TLGCPPL-IPPNTTVLFEIELLDFLDCAESDKFCALSAEQQDQFPLQKVLKVAATEREFG
: : . : ::. ...:. : .: : : :.. . :.. :: .: :
NP_004 EAGKPKFGIEPNAELIYEVTLKSFEKAKE-------SWEMDTKEKLEQ----AAIVKEKG
230 240 250 260 270
180 190 200 210 220 230
pF1KE6 NYLFRQNRFYDAKVRYKRALLLLRRRSAPPE-EQHLVEAAKLPVLLNLSFTYLKLDRPTI
. :. .....: ..: . . :. . . : :.. :. : ..:::.. :::: . :
NP_004 TVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTK
280 290 300 310 320 330
240 250 260 270 280 290
pF1KE6 ALCYGEQALIIDQKNAKALFRCGQACLLLTEYQKARDFLVRAQKEQPFNHDINNELKKLA
:. ..:: .:. : :.:.: :.: ::..:...:. . .. . .: :. ...
NP_004 AVECCDKALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQISMCQ
340 350 360 370 380 390
300 310 320
pF1KE6 SCYRDYVDKEKEMWHRMFAPCGDGSTAGES
. ... ....... ::
NP_004 KKAKEHNERDRRIYANMFKKFAEQDAKEEANKAMGKKTSEGVTNEKGTDSQAMEEEKPEG
400 410 420 430 440 450
>--
initn: 382 init1: 248 opt: 280 Z-score: 348.2 bits: 73.2 E(85289): 1.2e-12
Smith-Waterman score: 280; 37.9% identity (69.3% similar) in 140 aa overlap (7-142:4-137)
10 20 30 40 50
pF1KE6 MGGSALNQGVLEGDDAPGQSLYERLSQRMLDISG--DRGVLKDVIREGAGDLVAP--DAS
..:. .....: .. :. ::.. :::::: : : : :. . : .
NP_004 MTTDEGAKNNEESPTATVAEQGE----DITSKKDRGVLKIVKRVGNGEET-PMIGDK
10 20 30 40 50
60 70 80 90 100 110
pF1KE6 VLVKYSGYLEHMDRPFDSNYFRKTPRLMKLGEDITLWGMELGLLSMRRGELARFLFKPNY
: :.:.: : . . :::.. :. : ...::. .. . ..:. .:..::. ..: ::.:
NP_004 VYVHYKGKLSN-GKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKKGEICHLLCKPEY
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE6 AYGTLGCPPLIPPNTTVLFEIELLDFLDCAESDKFCALSAEQQDQFPLQKVLKVAATERE
:::. : : :: :.:..::::::::
NP_004 AYGSAGSLPKIPSNATLFFEIELLDFKGEDLFEDGGIIRRTKRKGEGYSNPNEGATVEIH
120 130 140 150 160 170
>>NP_001139248 (OMIM: 602623,608516) peptidyl-prolyl cis (457 aa)
initn: 382 init1: 248 opt: 280 Z-score: 348.2 bits: 73.2 E(85289): 1.2e-12
Smith-Waterman score: 282; 25.3% identity (57.3% similar) in 288 aa overlap (31-315:141-413)
10 20 30 40 50 60
pF1KE6 MGGSALNQGVLEGDDAPGQSLYERLSQRMLDISGDRGVLKDVIREGAGDLVAPDASVLVK
:. : :... . :.: : :. .. :.
NP_001 YAYGSAGSLPKIPSNATLFFEIELLDFKGEDLFEDGGIIRRTKRKGEG-YSNPNEGATVE
120 130 140 150 160
70 80 90 100 110
pF1KE6 YSGYLEHMDRPFDSNYFRKTPRLMKLGEDITL-WGMELGLLSMRRGELARFLFKPNYAYG
. : :: : . . ::: . :.. .: .:.: : . . : :..:
NP_001 IHLEGRCGGRMFDC---RDVAFTVGEGEDHDIPIGIDKALEKMQREEQCILYLGPRYGFG
170 180 190 200 210 220
120 130 140 150 160 170
pF1KE6 TLGCPPL-IPPNTTVLFEIELLDFLDCAESDKFCALSAEQQDQFPLQKVLKVAATEREFG
: : . : ::. ...:. : .: : : :.. . :.. :: .: :
NP_001 EAGKPKFGIEPNAELIYEVTLKSFEKAKE-------SWEMDTKEKLEQ----AAIVKEKG
230 240 250 260 270
180 190 200 210 220 230
pF1KE6 NYLFRQNRFYDAKVRYKRALLLLRRRSAPPE-EQHLVEAAKLPVLLNLSFTYLKLDRPTI
. :. .....: ..: . . :. . . : :.. :. : ..:::.. :::: . :
NP_001 TVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTK
280 290 300 310 320 330
240 250 260 270 280 290
pF1KE6 ALCYGEQALIIDQKNAKALFRCGQACLLLTEYQKARDFLVRAQKEQPFNHDINNELKKLA
:. ..:: .:. : :.:.: :.: ::..:...:. . .. . .: :. ...
NP_001 AVECCDKALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQISMCQ
340 350 360 370 380 390
300 310 320
pF1KE6 SCYRDYVDKEKEMWHRMFAPCGDGSTAGES
. ... ....... ::
NP_001 KKAKEHNERDRRIYANMFKKFAEQDAKEEANKAMGKKTSEGVTNEKGTDSQAMEEEKPEG
400 410 420 430 440 450
>--
initn: 382 init1: 248 opt: 280 Z-score: 348.2 bits: 73.2 E(85289): 1.2e-12
Smith-Waterman score: 280; 37.9% identity (69.3% similar) in 140 aa overlap (7-142:4-137)
10 20 30 40 50
pF1KE6 MGGSALNQGVLEGDDAPGQSLYERLSQRMLDISG--DRGVLKDVIREGAGDLVAP--DAS
..:. .....: .. :. ::.. :::::: : : : :. . : .
NP_001 MTTDEGAKNNEESPTATVAEQGE----DITSKKDRGVLKIVKRVGNGEET-PMIGDK
10 20 30 40 50
60 70 80 90 100 110
pF1KE6 VLVKYSGYLEHMDRPFDSNYFRKTPRLMKLGEDITLWGMELGLLSMRRGELARFLFKPNY
: :.:.: : . . :::.. :. : ...::. .. . ..:. .:..::. ..: ::.:
NP_001 VYVHYKGKLSN-GKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKKGEICHLLCKPEY
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE6 AYGTLGCPPLIPPNTTVLFEIELLDFLDCAESDKFCALSAEQQDQFPLQKVLKVAATERE
:::. : : :: :.:..::::::::
NP_001 AYGSAGSLPKIPSNATLFFEIELLDFKGEDLFEDGGIIRRTKRKGEGYSNPNEGATVEIH
120 130 140 150 160 170
327 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 12:20:18 2016 done: Tue Nov 8 12:20:19 2016
Total Scan time: 5.750 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]