Result of FASTA (omim) for
pFN21AE6342
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE6342, 384 aa
1>>>pF1KE6342 384 - 384 aa - 384 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.1799+/-0.000361; mu= 12.4774+/- 0.023
mean_var=76.4003+/-15.297, 0's: 0 Z-trim(114.2): 29 B-trim: 541 in 2/48
Lambda= 0.146733
statistics sampled from 23943 (23962) to 23943 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.655), E-opt: 0.2 (0.281), width: 16
Scan time: 7.310
The best scores are: opt bits E(85289)
NP_659483 (OMIM: 611414,613875) calreticulin-3 pre ( 384) 2655 571.4 1.2e-162
NP_004334 (OMIM: 109091,187950,254450) calreticuli ( 417) 951 210.7 5e-54
NP_001019820 (OMIM: 114217) calnexin precursor [Ho ( 592) 215 55.0 5.5e-07
XP_011532967 (OMIM: 114217) PREDICTED: calnexin is ( 592) 215 55.0 5.5e-07
NP_001737 (OMIM: 114217) calnexin precursor [Homo ( 592) 215 55.0 5.5e-07
XP_011532966 (OMIM: 114217) PREDICTED: calnexin is ( 646) 215 55.0 5.9e-07
NP_004353 (OMIM: 601858) calmegin precursor [Homo ( 610) 209 53.7 1.4e-06
NP_001124147 (OMIM: 601858) calmegin precursor [Ho ( 610) 209 53.7 1.4e-06
>>NP_659483 (OMIM: 611414,613875) calreticulin-3 precurs (384 aa)
initn: 2655 init1: 2655 opt: 2655 Z-score: 3041.1 bits: 571.4 E(85289): 1.2e-162
Smith-Waterman score: 2655; 99.7% identity (100.0% similar) in 384 aa overlap (1-384:1-384)
10 20 30 40 50 60
pF1KE6 MARALVQFWAICMLRVALATVYFQEEFLDGEHWRNRWLQSTNDSRFGHFRLSSGKFYGHK
:::::::.::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_659 MARALVQLWAICMLRVALATVYFQEEFLDGEHWRNRWLQSTNDSRFGHFRLSSGKFYGHK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 EKDKGLQTTQNGRFYAISARFKPFSNKGKTLVIQYTVKHEQKMDCGGGYIKVFPADIDQK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_659 EKDKGLQTTQNGRFYAISARFKPFSNKGKTLVIQYTVKHEQKMDCGGGYIKVFPADIDQK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 NLNGKSQYYIMFGPDICGFDIKKVHVILHFKNKYHENKKLIRCKVDGFTHLYTLILRPDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_659 NLNGKSQYYIMFGPDICGFDIKKVHVILHFKNKYHENKKLIRCKVDGFTHLYTLILRPDL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 SYDVKIDGQSIESGSIEYDWNLTSLKKETSPAESKDWEQTKDNKAQDWEKHFLDASTSKQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_659 SYDVKIDGQSIESGSIEYDWNLTSLKKETSPAESKDWEQTKDNKAQDWEKHFLDASTSKQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE6 SDWNGDLDGDWPAPMLQKPPYQDGLKPEGIHKDVWLHRKMKNTDYLTQYDLSEFENIGAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_659 SDWNGDLDGDWPAPMLQKPPYQDGLKPEGIHKDVWLHRKMKNTDYLTQYDLSEFENIGAI
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE6 GLELWQVRSGTIFDNFLITDDEEYADNFGKATWGETKGPEREMDAIQAKEEMKKAREEEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_659 GLELWQVRSGTIFDNFLITDDEEYADNFGKATWGETKGPEREMDAIQAKEEMKKAREEEE
310 320 330 340 350 360
370 380
pF1KE6 EELLSGKINRHEHYFNQFHRRNEL
::::::::::::::::::::::::
NP_659 EELLSGKINRHEHYFNQFHRRNEL
370 380
>>NP_004334 (OMIM: 109091,187950,254450) calreticulin pr (417 aa)
initn: 1193 init1: 878 opt: 951 Z-score: 1091.0 bits: 210.7 E(85289): 5e-54
Smith-Waterman score: 1312; 52.4% identity (76.8% similar) in 370 aa overlap (14-362:14-383)
10 20 30 40 50 60
pF1KE6 MARALVQFWAICMLRVALATVYFQEEFLDGEHWRNRWLQSTNDSRFGHFRLSSGKFYGHK
: :: .:::.:.::::. : .::..: . : ::.: :::::::: .
NP_004 MLLSVPLLLGLLGLAVAEPAVYFKEQFLDGDGWTSRWIESKHKSDFGKFVLSSGKFYGDE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 EKDKGLQTTQNGRFYAISARFKPFSNKGKTLVIQYTVKHEQKMDCGGGYIKVFPADIDQK
::::::::.:..::::.:: :.::::::.:::.:.::::::..::::::.:.:: ..::
NP_004 EKDKGLQTSQDARFYALSASFEPFSNKGQTLVVQFTVKHEQNIDCGGGYVKLFPNSLDQT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 NLNGKSQYYIMFGPDICGFDIKKVHVILHFKNKYHENKKLIRCKVDGFTHLYTLILRPDL
...: :.: ::::::::: ::::::...:.: .: :::: : ::::::::.:::
NP_004 DMHGDSEYNIMFGPDICGPGTKKVHVIFNYKGKNVLINKDIRCKDDEFTHLYTLIVRPDN
130 140 150 160 170 180
190 200 210 220 230
pF1KE6 SYDVKIDGQSIESGSIEYDWNLTSLKKETSPAESK--DW-EQTK-----DNKAQDWEK--
.:.::::....::::.: ::.. :: .: :: :: :..: :.: .::.:
NP_004 TYEVKIDNSQVESGSLEDDWDFLPPKKIKDPDASKPEDWDERAKIDDPTDSKPEDWDKPE
190 200 210 220 230 240
240 250 260 270 280
pF1KE6 HFLDASTSKQSDWNGDLDGDWPAPMLQKPPYQDGLKPEGI----HKDVWLHRKMKNTDYL
:. : ...: ::. ..::.: :..:.: :. ::. : .: .:.: .. : .:
NP_004 HIPDPDAKKPEDWDEEMDGEWEPPVIQNPEYKGEWKPRQIDNPDYKGTWIHPEIDNPEYS
250 260 270 280 290 300
290 300 310 320 330 340
pF1KE6 TQYDLSEFENIGAIGLELWQVRSGTIFDNFLITDDEEYADNFGKATWGETKGPEREM---
. .. ..:.:..::.::::.:::::::::::.:: ::..::. ::: ::. :..:
NP_004 PDPSIYAYDNFGVLGLDLWQVKSGTIFDNFLITNDEAYAEEFGNETWGVTKAAEKQMKDK
310 320 330 340 350 360
350 360 370 380
pF1KE6 ----DAIQAKEEMKKAREEEEEELLSGKINRHEHYFNQFHRRNEL
. .. .:: :: .:::: :
NP_004 QDEEQRLKEEEEDKKRKEEEEAEDKEDDEDKDEDEEDEEDKEEDEEEDVPGQAKDEL
370 380 390 400 410
>>NP_001019820 (OMIM: 114217) calnexin precursor [Homo s (592 aa)
initn: 569 init1: 150 opt: 215 Z-score: 246.5 bits: 55.0 E(85289): 5.5e-07
Smith-Waterman score: 492; 31.1% identity (55.0% similar) in 347 aa overlap (63-340:117-462)
40 50 60 70 80 90
pF1KE6 WRNRWLQSTNDSRFGHFRLSSGKFYGHKEKDKGLQTTQNGRFYAISARF-KPFSNKGKTL
:::: . .. .::::.. ::: : :
NP_001 KAKKDDTDDEIAKYDGKWEVEEMKESKLPGDKGLVLMSRAKHHAISAKLNKPFLFDTKPL
90 100 110 120 130 140
100 110 120 130 140
pF1KE6 VIQYTVKHEQKMDCGGGYIKVFPA--DIDQKNLNGKSQYYIMFGPDICGFDIKKVHVILH
..:: :. .. ..:::.:.:.. ... ... :. : :::::: :: : : .: :..
NP_001 IVQYEVNFQNGIECGGAYVKLLSKTPELNLDQFHDKTPYTIMFGPDKCGEDYK-LHFIFR
150 160 170 180 190 200
150 160 170 180 190
pF1KE6 FKNK---YHENKKLIRCKVD---GFT----HLYTLILRPDLSYDVKIDGQSIESGSI---
:: .:.:. : .: :: ::::::: :: :... .: . ..::..
NP_001 HKNPKTGIYEEKHAKRPDADLKTYFTDKKTHLYTLILNPDNSFEILVDQSVVNSGNLLND
210 220 230 240 250 260
200 210 220
pF1KE6 ------------------EYDWNLT-------SLKK----ETSPAESKDWEQTKDNKAQD
::. ..: : .::. : : :: . :
NP_001 MTPPVNPSREIEDPEDRKPEDWDERPKIPDPEAVKPDDWDEDAPAKIPDEEATKPEGWLD
270 280 290 300 310 320
230 240 250 260
pF1KE6 WEKHFL-DASTSKQSDWNGDLDGDWPAPML--------------QKP----P-YQDGLKP
: ... : .. : ::. :.::.: ::.. :.: : :. ::
NP_001 DEPEYVPDPDAEKPEDWDEDMDGEWEAPQIANPRCESAPGCGVWQRPVIDNPNYKGKWKP
330 340 350 360 370 380
270 280 290 300 310 320
pF1KE6 EGI----HKDVWLHRKMKNTDYLTQYDLSEFENIGAIGLELWQVRSGTIFDNFLITDDEE
: .. .: ::. : :.. . . .. ..:::::::.. : .::::.: :..
NP_001 PMIDNPSYQGIWKPRKIPNPDFFEDLEPFRMTPFSAIGLELWSMTSDIFFDNFIICADRR
390 400 410 420 430 440
330 340 350 360 370 380
pF1KE6 YADNFGKATWGETKGPEREMDAIQAKEEMKKAREEEEEELLSGKINRHEHYFNQFHRRNE
.:.... :: :. .
NP_001 IVDDWANDGWGLKKAADGAAEPGVVGQMIEAAEERPWLWVVYILTVALPVFLVILFCCSG
450 460 470 480 490 500
>>XP_011532967 (OMIM: 114217) PREDICTED: calnexin isofor (592 aa)
initn: 569 init1: 150 opt: 215 Z-score: 246.5 bits: 55.0 E(85289): 5.5e-07
Smith-Waterman score: 492; 31.1% identity (55.0% similar) in 347 aa overlap (63-340:117-462)
40 50 60 70 80 90
pF1KE6 WRNRWLQSTNDSRFGHFRLSSGKFYGHKEKDKGLQTTQNGRFYAISARF-KPFSNKGKTL
:::: . .. .::::.. ::: : :
XP_011 KAKKDDTDDEIAKYDGKWEVEEMKESKLPGDKGLVLMSRAKHHAISAKLNKPFLFDTKPL
90 100 110 120 130 140
100 110 120 130 140
pF1KE6 VIQYTVKHEQKMDCGGGYIKVFPA--DIDQKNLNGKSQYYIMFGPDICGFDIKKVHVILH
..:: :. .. ..:::.:.:.. ... ... :. : :::::: :: : : .: :..
XP_011 IVQYEVNFQNGIECGGAYVKLLSKTPELNLDQFHDKTPYTIMFGPDKCGEDYK-LHFIFR
150 160 170 180 190 200
150 160 170 180 190
pF1KE6 FKNK---YHENKKLIRCKVD---GFT----HLYTLILRPDLSYDVKIDGQSIESGSI---
:: .:.:. : .: :: ::::::: :: :... .: . ..::..
XP_011 HKNPKTGIYEEKHAKRPDADLKTYFTDKKTHLYTLILNPDNSFEILVDQSVVNSGNLLND
210 220 230 240 250 260
200 210 220
pF1KE6 ------------------EYDWNLT-------SLKK----ETSPAESKDWEQTKDNKAQD
::. ..: : .::. : : :: . :
XP_011 MTPPVNPSREIEDPEDRKPEDWDERPKIPDPEAVKPDDWDEDAPAKIPDEEATKPEGWLD
270 280 290 300 310 320
230 240 250 260
pF1KE6 WEKHFL-DASTSKQSDWNGDLDGDWPAPML--------------QKP----P-YQDGLKP
: ... : .. : ::. :.::.: ::.. :.: : :. ::
XP_011 DEPEYVPDPDAEKPEDWDEDMDGEWEAPQIANPRCESAPGCGVWQRPVIDNPNYKGKWKP
330 340 350 360 370 380
270 280 290 300 310 320
pF1KE6 EGI----HKDVWLHRKMKNTDYLTQYDLSEFENIGAIGLELWQVRSGTIFDNFLITDDEE
: .. .: ::. : :.. . . .. ..:::::::.. : .::::.: :..
XP_011 PMIDNPSYQGIWKPRKIPNPDFFEDLEPFRMTPFSAIGLELWSMTSDIFFDNFIICADRR
390 400 410 420 430 440
330 340 350 360 370 380
pF1KE6 YADNFGKATWGETKGPEREMDAIQAKEEMKKAREEEEEELLSGKINRHEHYFNQFHRRNE
.:.... :: :. .
XP_011 IVDDWANDGWGLKKAADGAAEPGVVGQMIEAAEERPWLWVVYILTVALPVFLVILFCCSG
450 460 470 480 490 500
>>NP_001737 (OMIM: 114217) calnexin precursor [Homo sapi (592 aa)
initn: 569 init1: 150 opt: 215 Z-score: 246.5 bits: 55.0 E(85289): 5.5e-07
Smith-Waterman score: 492; 31.1% identity (55.0% similar) in 347 aa overlap (63-340:117-462)
40 50 60 70 80 90
pF1KE6 WRNRWLQSTNDSRFGHFRLSSGKFYGHKEKDKGLQTTQNGRFYAISARF-KPFSNKGKTL
:::: . .. .::::.. ::: : :
NP_001 KAKKDDTDDEIAKYDGKWEVEEMKESKLPGDKGLVLMSRAKHHAISAKLNKPFLFDTKPL
90 100 110 120 130 140
100 110 120 130 140
pF1KE6 VIQYTVKHEQKMDCGGGYIKVFPA--DIDQKNLNGKSQYYIMFGPDICGFDIKKVHVILH
..:: :. .. ..:::.:.:.. ... ... :. : :::::: :: : : .: :..
NP_001 IVQYEVNFQNGIECGGAYVKLLSKTPELNLDQFHDKTPYTIMFGPDKCGEDYK-LHFIFR
150 160 170 180 190 200
150 160 170 180 190
pF1KE6 FKNK---YHENKKLIRCKVD---GFT----HLYTLILRPDLSYDVKIDGQSIESGSI---
:: .:.:. : .: :: ::::::: :: :... .: . ..::..
NP_001 HKNPKTGIYEEKHAKRPDADLKTYFTDKKTHLYTLILNPDNSFEILVDQSVVNSGNLLND
210 220 230 240 250 260
200 210 220
pF1KE6 ------------------EYDWNLT-------SLKK----ETSPAESKDWEQTKDNKAQD
::. ..: : .::. : : :: . :
NP_001 MTPPVNPSREIEDPEDRKPEDWDERPKIPDPEAVKPDDWDEDAPAKIPDEEATKPEGWLD
270 280 290 300 310 320
230 240 250 260
pF1KE6 WEKHFL-DASTSKQSDWNGDLDGDWPAPML--------------QKP----P-YQDGLKP
: ... : .. : ::. :.::.: ::.. :.: : :. ::
NP_001 DEPEYVPDPDAEKPEDWDEDMDGEWEAPQIANPRCESAPGCGVWQRPVIDNPNYKGKWKP
330 340 350 360 370 380
270 280 290 300 310 320
pF1KE6 EGI----HKDVWLHRKMKNTDYLTQYDLSEFENIGAIGLELWQVRSGTIFDNFLITDDEE
: .. .: ::. : :.. . . .. ..:::::::.. : .::::.: :..
NP_001 PMIDNPSYQGIWKPRKIPNPDFFEDLEPFRMTPFSAIGLELWSMTSDIFFDNFIICADRR
390 400 410 420 430 440
330 340 350 360 370 380
pF1KE6 YADNFGKATWGETKGPEREMDAIQAKEEMKKAREEEEEELLSGKINRHEHYFNQFHRRNE
.:.... :: :. .
NP_001 IVDDWANDGWGLKKAADGAAEPGVVGQMIEAAEERPWLWVVYILTVALPVFLVILFCCSG
450 460 470 480 490 500
>>XP_011532966 (OMIM: 114217) PREDICTED: calnexin isofor (646 aa)
initn: 569 init1: 150 opt: 215 Z-score: 245.8 bits: 55.0 E(85289): 5.9e-07
Smith-Waterman score: 492; 31.1% identity (55.0% similar) in 347 aa overlap (63-340:171-516)
40 50 60 70 80 90
pF1KE6 WRNRWLQSTNDSRFGHFRLSSGKFYGHKEKDKGLQTTQNGRFYAISARF-KPFSNKGKTL
:::: . .. .::::.. ::: : :
XP_011 KAKKDDTDDEIAKYDGKWEVEEMKESKLPGDKGLVLMSRAKHHAISAKLNKPFLFDTKPL
150 160 170 180 190 200
100 110 120 130 140
pF1KE6 VIQYTVKHEQKMDCGGGYIKVFPA--DIDQKNLNGKSQYYIMFGPDICGFDIKKVHVILH
..:: :. .. ..:::.:.:.. ... ... :. : :::::: :: : : .: :..
XP_011 IVQYEVNFQNGIECGGAYVKLLSKTPELNLDQFHDKTPYTIMFGPDKCGEDYK-LHFIFR
210 220 230 240 250
150 160 170 180 190
pF1KE6 FKNK---YHENKKLIRCKVD---GFT----HLYTLILRPDLSYDVKIDGQSIESGSI---
:: .:.:. : .: :: ::::::: :: :... .: . ..::..
XP_011 HKNPKTGIYEEKHAKRPDADLKTYFTDKKTHLYTLILNPDNSFEILVDQSVVNSGNLLND
260 270 280 290 300 310
200 210 220
pF1KE6 ------------------EYDWNLT-------SLKK----ETSPAESKDWEQTKDNKAQD
::. ..: : .::. : : :: . :
XP_011 MTPPVNPSREIEDPEDRKPEDWDERPKIPDPEAVKPDDWDEDAPAKIPDEEATKPEGWLD
320 330 340 350 360 370
230 240 250 260
pF1KE6 WEKHFL-DASTSKQSDWNGDLDGDWPAPML--------------QKP----P-YQDGLKP
: ... : .. : ::. :.::.: ::.. :.: : :. ::
XP_011 DEPEYVPDPDAEKPEDWDEDMDGEWEAPQIANPRCESAPGCGVWQRPVIDNPNYKGKWKP
380 390 400 410 420 430
270 280 290 300 310 320
pF1KE6 EGI----HKDVWLHRKMKNTDYLTQYDLSEFENIGAIGLELWQVRSGTIFDNFLITDDEE
: .. .: ::. : :.. . . .. ..:::::::.. : .::::.: :..
XP_011 PMIDNPSYQGIWKPRKIPNPDFFEDLEPFRMTPFSAIGLELWSMTSDIFFDNFIICADRR
440 450 460 470 480 490
330 340 350 360 370 380
pF1KE6 YADNFGKATWGETKGPEREMDAIQAKEEMKKAREEEEEELLSGKINRHEHYFNQFHRRNE
.:.... :: :. .
XP_011 IVDDWANDGWGLKKAADGAAEPGVVGQMIEAAEERPWLWVVYILTVALPVFLVILFCCSG
500 510 520 530 540 550
>>NP_004353 (OMIM: 601858) calmegin precursor [Homo sapi (610 aa)
initn: 550 init1: 131 opt: 209 Z-score: 239.4 bits: 53.7 E(85289): 1.4e-06
Smith-Waterman score: 516; 31.3% identity (55.2% similar) in 339 aa overlap (63-333:108-444)
40 50 60 70 80 90
pF1KE6 WRNRWLQSTNDSRFGHFRLSSGKFYGHKEKDKGLQTTQNGRFYAISARF-KPFSNKGKTL
:.:: . .. .:::: . ::: : :
NP_004 KAKKDDMDEEISIYDGRWEIEELKENQVPGDRGLVLKSRAKHHAISAVLAKPFIFADKPL
80 90 100 110 120 130
100 110 120 130 140
pF1KE6 VIQYTVKHEQKMDCGGGYIKVFPADIDQ---KNLNGKSQYYIMFGPDICGFDIKKVHVIL
..:: :. .. .::::.:::.. :: :. .:. :..: :::::: :: : : .: :.
NP_004 IVQYEVNFQDGIDCGGAYIKLL-ADTDDLILENFYDKTSYIIMFGPDKCGEDYK-LHFIF
140 150 160 170 180 190
150 160 170 180 190
pF1KE6 ---HFKNKYHENKK-------LIRCKVDGFTHLYTLILRPDLSYDVKIDGQSIESGSIEY
: :. :.:. : . .: ::::::.. :: ...: .: ...::.
NP_004 RHKHPKTGVFEEKHAKPPDVDLKKFFTDRKTHLYTLVMNPDDTFEVLVDQTVVNKGSLLE
200 210 220 230 240 250
200 210 220
pF1KE6 D---------------------WNLTSLKKETSPAESKDWEQTKDNKAQD--------W-
: :. . . : .. .::.... . .: :
NP_004 DVVPPIKPPKEIEDPNDKKPEEWDERAKIPDPSAVKPEDWDESEPAQIEDSSVVKPAGWL
260 270 280 290 300 310
230 240 250 260 270
pF1KE6 --EKHFL-DASTSKQSDWNGDLDGDWPAPML-----------QKPPYQDGLKPEGI----
: .:. : .. : .::: : ::.: ::.. :::. :. : .:.
NP_004 DDEPKFIPDPNAEKPDDWNEDTDGEWEAPQILNPACRIGCGEWKPPMIDNPKYKGVWRPP
320 330 340 350 360 370
280 290 300 310 320
pF1KE6 ------HKDVWLHRKMKNTDYLTQYDLSEFENIGAIGLELWQVRSGTIFDNFLITDDEEY
.. .: ::. : ::. . . ...:.:::::.. : ::::.: ...:
NP_004 LVDNPNYQGIWSPRKIPNPDYFEDDHPFLLTSFSALGLELWSMTSDIYFDNFIICSEKEV
380 390 400 410 420 430
330 340 350 360 370 380
pF1KE6 ADNFGKATWGETKGPEREMDAIQAKEEMKKAREEEEEELLSGKINRHEHYFNQFHRRNEL
::... :
NP_004 ADHWAADGWRWKIMIANANKPGVLKQLMAAAEGHPWLWLIYLVTAGVPIALITSFCWPRK
440 450 460 470 480 490
>>NP_001124147 (OMIM: 601858) calmegin precursor [Homo s (610 aa)
initn: 550 init1: 131 opt: 209 Z-score: 239.4 bits: 53.7 E(85289): 1.4e-06
Smith-Waterman score: 516; 31.3% identity (55.2% similar) in 339 aa overlap (63-333:108-444)
40 50 60 70 80 90
pF1KE6 WRNRWLQSTNDSRFGHFRLSSGKFYGHKEKDKGLQTTQNGRFYAISARF-KPFSNKGKTL
:.:: . .. .:::: . ::: : :
NP_001 KAKKDDMDEEISIYDGRWEIEELKENQVPGDRGLVLKSRAKHHAISAVLAKPFIFADKPL
80 90 100 110 120 130
100 110 120 130 140
pF1KE6 VIQYTVKHEQKMDCGGGYIKVFPADIDQ---KNLNGKSQYYIMFGPDICGFDIKKVHVIL
..:: :. .. .::::.:::.. :: :. .:. :..: :::::: :: : : .: :.
NP_001 IVQYEVNFQDGIDCGGAYIKLL-ADTDDLILENFYDKTSYIIMFGPDKCGEDYK-LHFIF
140 150 160 170 180 190
150 160 170 180 190
pF1KE6 ---HFKNKYHENKK-------LIRCKVDGFTHLYTLILRPDLSYDVKIDGQSIESGSIEY
: :. :.:. : . .: ::::::.. :: ...: .: ...::.
NP_001 RHKHPKTGVFEEKHAKPPDVDLKKFFTDRKTHLYTLVMNPDDTFEVLVDQTVVNKGSLLE
200 210 220 230 240 250
200 210 220
pF1KE6 D---------------------WNLTSLKKETSPAESKDWEQTKDNKAQD--------W-
: :. . . : .. .::.... . .: :
NP_001 DVVPPIKPPKEIEDPNDKKPEEWDERAKIPDPSAVKPEDWDESEPAQIEDSSVVKPAGWL
260 270 280 290 300 310
230 240 250 260 270
pF1KE6 --EKHFL-DASTSKQSDWNGDLDGDWPAPML-----------QKPPYQDGLKPEGI----
: .:. : .. : .::: : ::.: ::.. :::. :. : .:.
NP_001 DDEPKFIPDPNAEKPDDWNEDTDGEWEAPQILNPACRIGCGEWKPPMIDNPKYKGVWRPP
320 330 340 350 360 370
280 290 300 310 320
pF1KE6 ------HKDVWLHRKMKNTDYLTQYDLSEFENIGAIGLELWQVRSGTIFDNFLITDDEEY
.. .: ::. : ::. . . ...:.:::::.. : ::::.: ...:
NP_001 LVDNPNYQGIWSPRKIPNPDYFEDDHPFLLTSFSALGLELWSMTSDIYFDNFIICSEKEV
380 390 400 410 420 430
330 340 350 360 370 380
pF1KE6 ADNFGKATWGETKGPEREMDAIQAKEEMKKAREEEEEELLSGKINRHEHYFNQFHRRNEL
::... :
NP_001 ADHWAADGWRWKIMIANANKPGVLKQLMAAAEGHPWLWLIYLVTAGVPIALITSFCWPRK
440 450 460 470 480 490
384 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 12:17:20 2016 done: Tue Nov 8 12:17:21 2016
Total Scan time: 7.310 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]