Result of FASTA (omim) for
pFN21AE6320
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE6320, 401 aa
1>>>pF1KE6320 401 - 401 aa - 401 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.5744+/-0.000342; mu= 15.2796+/- 0.021
mean_var=68.2565+/-13.526, 0's: 0 Z-trim(113.4): 31 B-trim: 4 in 1/53
Lambda= 0.155240
statistics sampled from 22703 (22714) to 22703 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.637), E-opt: 0.2 (0.266), width: 16
Scan time: 5.450
The best scores are: opt bits E(85289)
NP_006362 (OMIM: 605497,610682) cartilage-associat ( 401) 2726 619.7 4e-177
NP_001139761 (OMIM: 610339,610915) prolyl 3-hydrox ( 697) 727 172.1 3.8e-42
NP_071751 (OMIM: 610339,610915) prolyl 3-hydroxyla ( 736) 727 172.1 4e-42
NP_001230175 (OMIM: 610339,610915) prolyl 3-hydrox ( 804) 727 172.1 4.3e-42
NP_060662 (OMIM: 610341,614292) prolyl 3-hydroxyla ( 708) 659 156.8 1.5e-37
NP_055077 (OMIM: 610342) prolyl 3-hydroxylase 3 pr ( 736) 269 69.5 3e-11
XP_011511257 (OMIM: 610341,614292) PREDICTED: prol ( 527) 175 48.4 4.9e-05
NP_001127890 (OMIM: 610341,614292) prolyl 3-hydrox ( 527) 175 48.4 4.9e-05
>>NP_006362 (OMIM: 605497,610682) cartilage-associated p (401 aa)
initn: 2726 init1: 2726 opt: 2726 Z-score: 3300.9 bits: 619.7 E(85289): 4e-177
Smith-Waterman score: 2726; 99.8% identity (100.0% similar) in 401 aa overlap (1-401:1-401)
10 20 30 40 50 60
pF1KE6 MEPGRRGAAALLALLCVACALRAGRAQYERYSFRSFPRDELMPLESAYRHALDKYSGEHW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 MEPGRRGAAALLALLCVACALRAGRAQYERYSFRSFPRDELMPLESAYRHALDKYSGEHW
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 AESVGYLEISLRLHRLLRDSEAFCHRNCSAAPQPEPAAGLASYPELRLFGGLLRRAHCLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 AESVGYLEISLRLHRLLRDSEAFCHRNCSAAPQPEPAAGLASYPELRLFGGLLRRAHCLK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 RCKQGLPAFRQSQPSRDVLADFQRREPYKFLQFAYFKANNLPKAIAAAHTFLLKHPDDEM
::::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::
NP_006 RCKQGLPAFRQSQPSREVLADFQRREPYKFLQFAYFKANNLPKAIAAAHTFLLKHPDDEM
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 MKRNMAYYKSLPGAEDYIKDLETKSYESLFIRAVRAYNGENWRTSITDMELALPDFFKAF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 MKRNMAYYKSLPGAEDYIKDLETKSYESLFIRAVRAYNGENWRTSITDMELALPDFFKAF
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE6 YECLAACEGSREIKDFKDFYLSIADHYVEVLECKIQCEENLTPVIGGYPVEKFVATMYHY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 YECLAACEGSREIKDFKDFYLSIADHYVEVLECKIQCEENLTPVIGGYPVEKFVATMYHY
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE6 LQFAYYKLNDLKNAAPCAVSYLLFDQNDKVMQQNLVYYQYHRDTWGLSDEHFQPRPEAVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 LQFAYYKLNDLKNAAPCAVSYLLFDQNDKVMQQNLVYYQYHRDTWGLSDEHFQPRPEAVQ
310 320 330 340 350 360
370 380 390 400
pF1KE6 FFNVTTLQKELYDFAKENIMDDDEGEVVEYVDDLLELEETS
:::::::::::::::::::::::::::::::::::::::::
NP_006 FFNVTTLQKELYDFAKENIMDDDEGEVVEYVDDLLELEETS
370 380 390 400
>>NP_001139761 (OMIM: 610339,610915) prolyl 3-hydroxylas (697 aa)
initn: 704 init1: 202 opt: 727 Z-score: 877.6 bits: 172.1 E(85289): 3.8e-42
Smith-Waterman score: 727; 36.3% identity (62.4% similar) in 391 aa overlap (6-375:4-379)
10 20 30 40 50 60
pF1KE6 MEPGRRGAAALLALLCVACALRAGRAQYERYSFRSFPRDELMPLESAYRHALDKYSGEHW
:. : .:: :. : :..:. : . .. .:. :.. .: :. :
NP_001 MAVRALKLLTTLLAVVAA--ASQAEVESEAGWGMVTPDLLFAEGTAAYA----RGD-W
10 20 30 40 50
70 80 90 100 110
pF1KE6 AESVGYLEISLRLHRLLRDSEAFCHRNCSA----------APQPEPAAGLASYPELRLFG
: .: .:: . :: . :. .:.: .:.: :.: :. .: .::
NP_001 PGVVLSMERALRSRAALRALRLRCRTQCAADFPWELDPDWSPSPAQASGAAALRDLSFFG
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE6 GLLRRAHCLKRCKQGLPAFRQSQPSRDVLADFQRREPYKFLQFAYFKANNLPKAIAAAHT
:::::: ::.:: : :: . :... .:..: ::..:: :::: :.: ::.:::::
NP_001 GLLRRAACLRRC-LGPPA--AHSLSEEMELEFRKRSPYNYLQVAYFKINKLEKAVAAAHT
120 130 140 150 160
180 190 200 210 220
pF1KE6 FLLKHPDDEMMKRNMAYYKSLPGAEDY-IKDLETKSYESLFIRAVRAYNGENWRTSITDM
:.. .:. :..:. ::... :... .:::::. . . : .:: :. :. . .. .
NP_001 FFVGNPEHMEMQQNLDYYQTMSGVKEADFKDLETQPHMQEFRLGVRLYSEEQPQEAVPHL
170 180 190 200 210 220
230 240 250 260 270 280
pF1KE6 ELALPDFFKAFYECLAACEGSREIKDFK------DFYLSIADHYVEVLECKIQCEENLTP
: :: ..: :. :: : ::: . .. :.. .:.:::..::.:: .: .:.
NP_001 EAALQEYFVAYEECRALCEGPYDYDGYNYLEYNADLFQAITDHYIQVLNCKQNCVTELAS
230 240 250 260 270 280
290 300 310 320 330 340
pF1KE6 VIGGY-PVEKFVATMYHYLQFAYYKLNDLKNAAPCAVSYLLFDQNDKVMQQNLVYYQYHR
. : : :. . :.:::::::.... .:. :: .:::: ::.::.:::.::
NP_001 HPSREKPFEDFLPSHYNYLQFAYYNIGNYTQAVECAKTYLLFFPNDEVMNQNLAYYAAM-
290 300 310 320 330 340
350 360 370 380 390
pF1KE6 DTWGLSDEHFQ---PRPEAVQFFNVTTLQKELYDFAKENIMDDDEGEVVEYVDDLLELEE
:..:: . :: : .. . . :.::: ::
NP_001 ----LGEEHTRSIGPRESAKEYRQRSLLEKELLFFAYDVFGIPFVDPDSWTPEEVIPKRL
350 360 370 380 390 400
400
pF1KE6 TS
NP_001 QEKQKSERETAVRISQEIGNLMKEIETLVEEKTKESLDVSRLTREGGPLLYEGISLTMNS
410 420 430 440 450 460
>>NP_071751 (OMIM: 610339,610915) prolyl 3-hydroxylase 1 (736 aa)
initn: 704 init1: 202 opt: 727 Z-score: 877.2 bits: 172.1 E(85289): 4e-42
Smith-Waterman score: 727; 36.3% identity (62.4% similar) in 391 aa overlap (6-375:4-379)
10 20 30 40 50 60
pF1KE6 MEPGRRGAAALLALLCVACALRAGRAQYERYSFRSFPRDELMPLESAYRHALDKYSGEHW
:. : .:: :. : :..:. : . .. .:. :.. .: :. :
NP_071 MAVRALKLLTTLLAVVAA--ASQAEVESEAGWGMVTPDLLFAEGTAAYA----RGD-W
10 20 30 40 50
70 80 90 100 110
pF1KE6 AESVGYLEISLRLHRLLRDSEAFCHRNCSA----------APQPEPAAGLASYPELRLFG
: .: .:: . :: . :. .:.: .:.: :.: :. .: .::
NP_071 PGVVLSMERALRSRAALRALRLRCRTQCAADFPWELDPDWSPSPAQASGAAALRDLSFFG
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE6 GLLRRAHCLKRCKQGLPAFRQSQPSRDVLADFQRREPYKFLQFAYFKANNLPKAIAAAHT
:::::: ::.:: : :: . :... .:..: ::..:: :::: :.: ::.:::::
NP_071 GLLRRAACLRRC-LGPPA--AHSLSEEMELEFRKRSPYNYLQVAYFKINKLEKAVAAAHT
120 130 140 150 160
180 190 200 210 220
pF1KE6 FLLKHPDDEMMKRNMAYYKSLPGAEDY-IKDLETKSYESLFIRAVRAYNGENWRTSITDM
:.. .:. :..:. ::... :... .:::::. . . : .:: :. :. . .. .
NP_071 FFVGNPEHMEMQQNLDYYQTMSGVKEADFKDLETQPHMQEFRLGVRLYSEEQPQEAVPHL
170 180 190 200 210 220
230 240 250 260 270 280
pF1KE6 ELALPDFFKAFYECLAACEGSREIKDFK------DFYLSIADHYVEVLECKIQCEENLTP
: :: ..: :. :: : ::: . .. :.. .:.:::..::.:: .: .:.
NP_071 EAALQEYFVAYEECRALCEGPYDYDGYNYLEYNADLFQAITDHYIQVLNCKQNCVTELAS
230 240 250 260 270 280
290 300 310 320 330 340
pF1KE6 VIGGY-PVEKFVATMYHYLQFAYYKLNDLKNAAPCAVSYLLFDQNDKVMQQNLVYYQYHR
. : : :. . :.:::::::.... .:. :: .:::: ::.::.:::.::
NP_071 HPSREKPFEDFLPSHYNYLQFAYYNIGNYTQAVECAKTYLLFFPNDEVMNQNLAYYAAM-
290 300 310 320 330 340
350 360 370 380 390
pF1KE6 DTWGLSDEHFQ---PRPEAVQFFNVTTLQKELYDFAKENIMDDDEGEVVEYVDDLLELEE
:..:: . :: : .. . . :.::: ::
NP_071 ----LGEEHTRSIGPRESAKEYRQRSLLEKELLFFAYDVFGIPFVDPDSWTPEEVIPKRL
350 360 370 380 390 400
400
pF1KE6 TS
NP_071 QEKQKSERETAVRISQEIGNLMKEIETLVEEKTKESLDVSRLTREGGPLLYEGISLTMNS
410 420 430 440 450 460
>>NP_001230175 (OMIM: 610339,610915) prolyl 3-hydroxylas (804 aa)
initn: 704 init1: 202 opt: 727 Z-score: 876.6 bits: 172.1 E(85289): 4.3e-42
Smith-Waterman score: 727; 36.3% identity (62.4% similar) in 391 aa overlap (6-375:4-379)
10 20 30 40 50 60
pF1KE6 MEPGRRGAAALLALLCVACALRAGRAQYERYSFRSFPRDELMPLESAYRHALDKYSGEHW
:. : .:: :. : :..:. : . .. .:. :.. .: :. :
NP_001 MAVRALKLLTTLLAVVAA--ASQAEVESEAGWGMVTPDLLFAEGTAAYA----RGD-W
10 20 30 40 50
70 80 90 100 110
pF1KE6 AESVGYLEISLRLHRLLRDSEAFCHRNCSA----------APQPEPAAGLASYPELRLFG
: .: .:: . :: . :. .:.: .:.: :.: :. .: .::
NP_001 PGVVLSMERALRSRAALRALRLRCRTQCAADFPWELDPDWSPSPAQASGAAALRDLSFFG
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE6 GLLRRAHCLKRCKQGLPAFRQSQPSRDVLADFQRREPYKFLQFAYFKANNLPKAIAAAHT
:::::: ::.:: : :: . :... .:..: ::..:: :::: :.: ::.:::::
NP_001 GLLRRAACLRRC-LGPPA--AHSLSEEMELEFRKRSPYNYLQVAYFKINKLEKAVAAAHT
120 130 140 150 160
180 190 200 210 220
pF1KE6 FLLKHPDDEMMKRNMAYYKSLPGAEDY-IKDLETKSYESLFIRAVRAYNGENWRTSITDM
:.. .:. :..:. ::... :... .:::::. . . : .:: :. :. . .. .
NP_001 FFVGNPEHMEMQQNLDYYQTMSGVKEADFKDLETQPHMQEFRLGVRLYSEEQPQEAVPHL
170 180 190 200 210 220
230 240 250 260 270 280
pF1KE6 ELALPDFFKAFYECLAACEGSREIKDFK------DFYLSIADHYVEVLECKIQCEENLTP
: :: ..: :. :: : ::: . .. :.. .:.:::..::.:: .: .:.
NP_001 EAALQEYFVAYEECRALCEGPYDYDGYNYLEYNADLFQAITDHYIQVLNCKQNCVTELAS
230 240 250 260 270 280
290 300 310 320 330 340
pF1KE6 VIGGY-PVEKFVATMYHYLQFAYYKLNDLKNAAPCAVSYLLFDQNDKVMQQNLVYYQYHR
. : : :. . :.:::::::.... .:. :: .:::: ::.::.:::.::
NP_001 HPSREKPFEDFLPSHYNYLQFAYYNIGNYTQAVECAKTYLLFFPNDEVMNQNLAYYAAM-
290 300 310 320 330 340
350 360 370 380 390
pF1KE6 DTWGLSDEHFQ---PRPEAVQFFNVTTLQKELYDFAKENIMDDDEGEVVEYVDDLLELEE
:..:: . :: : .. . . :.::: ::
NP_001 ----LGEEHTRSIGPRESAKEYRQRSLLEKELLFFAYDVFGIPFVDPDSWTPEEVIPKRL
350 360 370 380 390 400
400
pF1KE6 TS
NP_001 QEKQKSERETAVRISQEIGNLMKEIETLVEEKTKESLDVSRLTREGGPLLYEGISLTMNS
410 420 430 440 450 460
>>NP_060662 (OMIM: 610341,614292) prolyl 3-hydroxylase 2 (708 aa)
initn: 517 init1: 205 opt: 659 Z-score: 795.2 bits: 156.8 E(85289): 1.5e-37
Smith-Waterman score: 659; 34.6% identity (61.5% similar) in 382 aa overlap (11-379:13-389)
10 20 30 40 50
pF1KE6 MEPGRRGAAALLALLCVACALRAGRAQYERYSFRSFPRDELMPLESAYRH-ALDKYSG
:: :: . : .: . : .. : :.:.. : : :::
NP_060 MRERIWAPPLLLLLPLL-LPPPLWGGPPDSPRRELELEP-GPLQPFDLLYASGAAAYYSG
10 20 30 40 50
60 70 80 90 100 110
pF1KE6 EHWAESVGYLEISLRLHRLLRDSEAFCHRNCSAA-PQPEPAAGLASYPELRLFGGLLRRA
.. ..: :: .:: :: ::. .. : :.:.: : : : : . :: :: .:: ::
NP_060 DY-ERAVRDLEAALRSHRRLREIRTRCARHCAARHPLPPPPPGEGPGAELPLFRSLLGRA
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE6 HCLKRC---KQGLPAFRQSQPSRDVLADFQRREPYKFLQFAYFKANNLPKAIAAAHTFLL
.: . : . : :: :. . :.:: .::::: ::..:: ::.: :.: ::. :::::..
NP_060 RCYRSCETQRLGGPASRH-RVSEDVRSDFQRRVPYNYLQRAYIKLNQLEKAVEAAHTFFV
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE6 KHPDDEMMKRNMAYYKSLPGAEDY-IKDLETKSYESLFIRAVRAYNGENWRTSITDMELA
.:. :..:. :.. :.: . : :.: . . .:. :...... .: .: :
NP_060 ANPEHMEMQQNIENYRATAGVEALQLVDREAKPHMESYNAGVKHYEADDFEMAIRHFEQA
180 190 200 210 220 230
240 250 260 270 280
pF1KE6 LPDFFKAFYECLAACEGSREIKDFK------DFYLSIADHYVEVLECKIQCEENLTPVIG
: ..: :: . ::: ....... .: .:::::..:: :. .: ..:. :
NP_060 LREYFVEDTECRTLCEGPQRFEEYEYLGYKAGLYEAIADHYMQVLVCQHECVRELATRPG
240 250 260 270 280 290
290 300 310 320 330 340
pF1KE6 GY-PVEKFVATMYHYLQFAYYKLNDLKNAAPCAVSYLLFDQNDKVMQQNLVYYQYHRDTW
:.:.:. : :::::::.... .: :: .::: .:. . .:. ::. :
NP_060 RLSPIENFLPLHYDYLQFAYYRVGEYVKALECAKAYLLCHPDDEDVLDNVDYYESLLDD-
300 310 320 330 340 350
350 360 370 380 390 400
pF1KE6 GLSDEHFQPRPEAVQFFNVTTLQKELYDFAKENIMDDDEGEVVEYVDDLLELEETS
... .. : . ..: . :..:: : :..
NP_060 SIDPASIEAREDLTMFVKRHKLESELIKSAAEGLGFSYTEPNYWIRYGGRQDENRVPSGV
360 370 380 390 400 410
NP_060 NVEGAEVHGFSMGKKLSPKIDRDLREGGPLLYENITFVYNSEQLNGTQRVLLDNVLSEEQ
420 430 440 450 460 470
>>NP_055077 (OMIM: 610342) prolyl 3-hydroxylase 3 precur (736 aa)
initn: 272 init1: 157 opt: 269 Z-score: 322.9 bits: 69.5 E(85289): 3e-11
Smith-Waterman score: 431; 28.2% identity (55.9% similar) in 365 aa overlap (48-379:41-397)
20 30 40 50 60 70
pF1KE6 ACALRAGRAQYERYSFRSFPRDELMPLESAYRHALDKYSGEHWAESVGYLEISLRLHRLL
: .: :.. :: .:. :. .:: . :
NP_055 LLLLPPPGSPEPPGLTQLSPGAPPQAPDLLYADGLRAYAAGAWAPAVALLREALRSQAAL
20 30 40 50 60 70
80 90 100 110 120
pF1KE6 RDSEAFCHRNCSAAP----------QPEPAAGLASYP---ELRLFGGLLRRAHCLKRCKQ
. : .:.: : ::: .: . : .:. . :::: :: .:
NP_055 GRVRLDCGASCAADPGAALPAVLLGAPEPDSGPGPTQGSWERQLLRAALRRADCLTQCAA
80 90 100 110 120 130
130 140 150 160 170
pF1KE6 ------GLPAFRQSQPSRDVLADFQRREPYKFLQFAYFKANNLPKAIAAAHTFLLKHPDD
: .: .. ::. :.:::::..:: ::.. ..: : ::::::.. .:
NP_055 RRLGPGGAARLRVGSALRDA---FRRREPYNYLQRAYYQLKKLDLAAAAAHTFFVANPMH
140 150 160 170 180
180 190 200 210 220 230
pF1KE6 EMMKRNMAYYKSLPGAEDY-IKDLETKSYESLFIRAVRAYNGENWRTSITDMELALPDFF
.:...:: :. . :.. ..:::: . . . ... . .. .. .: :: .
NP_055 LQMREDMAKYRRMSGVRPQSFRDLETPPHWAAYDTGLELLGRQEAGLALPRLEEALQGSL
190 200 210 220 230 240
240 250 260 270 280
pF1KE6 KAFYECLAACEGSREIKDFKD----------FYLSIADHYVEVLECKIQCEENLTPVIG-
. : : ::: .: . .. .: .:: :...::.:. .: . . :
NP_055 AQMESCRADCEGPEEQQGAEEEEDGAASQGGLYEAIAGHWIQVLQCRQRCVGETATRPGR
250 260 270 280 290 300
290 300 310 320 330 340
pF1KE6 GYPVEKFVATMYHYLQFAYYKLNDLKNAAPCAVSYLLFDQNDKVMQQNLVYYQYHRDTWG
..:: :. .. . :. :. ....:..: ..: ::: .:.. .. : :: . :
NP_055 SFPVPDFLPNQLRRLHEAHAQVGNLSQAIENVLSVLLFYPEDEAAKRALNQYQAQ---LG
310 320 330 340 350 360
350 360 370 380 390 400
pF1KE6 LSDEHFQPRPEAVQFFNVTTL--QKELYDFAKENIMDDDEGEVVEYVDDLLELEETS
. :: : .: : . .: ...:: .: :..
NP_055 EPRPGLGPR-EDIQRFILRSLGEKRQLY-YAMEHLGTSFKDPDPWTPAALIPEALREKLR
370 380 390 400 410 420
NP_055 EDQEKRPWDHEPVKPKPLTYWKDVLLLEGVTLTQDSRQLNGSERAVLDGLLTPAECGVLL
430 440 450 460 470 480
>>XP_011511257 (OMIM: 610341,614292) PREDICTED: prolyl 3 (527 aa)
initn: 216 init1: 141 opt: 175 Z-score: 211.4 bits: 48.4 E(85289): 4.9e-05
Smith-Waterman score: 326; 29.5% identity (61.8% similar) in 207 aa overlap (181-379:3-208)
160 170 180 190 200
pF1KE6 LQFAYFKANNLPKAIAAAHTFLLKHPDDEMMKRNMAYYKSLPGAEDY-IKDLETKSYESL
:..:. :.. :.: . : :.: .
XP_011 MEMQQNIENYRATAGVEALQLVDREAKPHMES
10 20 30
210 220 230 240 250 260
pF1KE6 FIRAVRAYNGENWRTSITDMELALPDFFKAFYECLAACEGSREIKDFK------DFYLSI
. .:. :...... .: .: :: ..: :: . ::: ....... .: .:
XP_011 YNAGVKHYEADDFEMAIRHFEQALREYFVEDTECRTLCEGPQRFEEYEYLGYKAGLYEAI
40 50 60 70 80 90
270 280 290 300 310 320
pF1KE6 ADHYVEVLECKIQCEENLTPVIGGY-PVEKFVATMYHYLQFAYYKLNDLKNAAPCAVSYL
::::..:: :. .: ..:. : :.:.:. : :::::::.... .: :: .::
XP_011 ADHYMQVLVCQHECVRELATRPGRLSPIENFLPLHYDYLQFAYYRVGEYVKALECAKAYL
100 110 120 130 140 150
330 340 350 360 370 380
pF1KE6 LFDQNDKVMQQNLVYYQYHRDTWGLSDEHFQPRPEAVQFFNVTTLQKELYDFAKENIMDD
: .:. . .:. ::. : ... .. : . ..: . :..:: : :..
XP_011 LCHPDDEDVLDNVDYYESLLDD-SIDPASIEAREDLTMFVKRHKLESELIKSAAEGLGFS
160 170 180 190 200 210
390 400
pF1KE6 DEGEVVEYVDDLLELEETS
XP_011 YTEPNYWIRYGGRQDENRVPSGVNVEGAEVHGFSMGKKLSPKIDRDLREGGPLLYENITF
220 230 240 250 260 270
>>NP_001127890 (OMIM: 610341,614292) prolyl 3-hydroxylas (527 aa)
initn: 216 init1: 141 opt: 175 Z-score: 211.4 bits: 48.4 E(85289): 4.9e-05
Smith-Waterman score: 326; 29.5% identity (61.8% similar) in 207 aa overlap (181-379:3-208)
160 170 180 190 200
pF1KE6 LQFAYFKANNLPKAIAAAHTFLLKHPDDEMMKRNMAYYKSLPGAEDY-IKDLETKSYESL
:..:. :.. :.: . : :.: .
NP_001 MEMQQNIENYRATAGVEALQLVDREAKPHMES
10 20 30
210 220 230 240 250 260
pF1KE6 FIRAVRAYNGENWRTSITDMELALPDFFKAFYECLAACEGSREIKDFK------DFYLSI
. .:. :...... .: .: :: ..: :: . ::: ....... .: .:
NP_001 YNAGVKHYEADDFEMAIRHFEQALREYFVEDTECRTLCEGPQRFEEYEYLGYKAGLYEAI
40 50 60 70 80 90
270 280 290 300 310 320
pF1KE6 ADHYVEVLECKIQCEENLTPVIGGY-PVEKFVATMYHYLQFAYYKLNDLKNAAPCAVSYL
::::..:: :. .: ..:. : :.:.:. : :::::::.... .: :: .::
NP_001 ADHYMQVLVCQHECVRELATRPGRLSPIENFLPLHYDYLQFAYYRVGEYVKALECAKAYL
100 110 120 130 140 150
330 340 350 360 370 380
pF1KE6 LFDQNDKVMQQNLVYYQYHRDTWGLSDEHFQPRPEAVQFFNVTTLQKELYDFAKENIMDD
: .:. . .:. ::. : ... .. : . ..: . :..:: : :..
NP_001 LCHPDDEDVLDNVDYYESLLDD-SIDPASIEAREDLTMFVKRHKLESELIKSAAEGLGFS
160 170 180 190 200 210
390 400
pF1KE6 DEGEVVEYVDDLLELEETS
NP_001 YTEPNYWIRYGGRQDENRVPSGVNVEGAEVHGFSMGKKLSPKIDRDLREGGPLLYENITF
220 230 240 250 260 270
401 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 12:04:20 2016 done: Tue Nov 8 12:04:21 2016
Total Scan time: 5.450 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]