Result of FASTA (omim) for
pFN21AE6309
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE6309, 372 aa
1>>>pF1KE6309 372 - 372 aa - 372 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.0111+/-0.000405; mu= 17.9099+/- 0.025
mean_var=64.2517+/-12.845, 0's: 0 Z-trim(109.9): 28 B-trim: 0 in 0/50
Lambda= 0.160004
statistics sampled from 18122 (18146) to 18122 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.572), E-opt: 0.2 (0.213), width: 16
Scan time: 6.010
The best scores are: opt bits E(85289)
NP_001491 (OMIM: 602884) GDP-mannose 4,6 dehydrata ( 372) 2492 584.4 1.4e-166
XP_011512802 (OMIM: 602884) PREDICTED: GDP-mannose ( 342) 2258 530.4 2.4e-150
NP_001240775 (OMIM: 602884) GDP-mannose 4,6 dehydr ( 342) 2257 530.1 2.8e-150
XP_011512804 (OMIM: 602884) PREDICTED: GDP-mannose ( 334) 2196 516.1 4.8e-146
XP_016866241 (OMIM: 602884) PREDICTED: GDP-mannose ( 285) 1725 407.3 2.3e-113
XP_006715129 (OMIM: 602884) PREDICTED: GDP-mannose ( 290) 1710 403.8 2.5e-112
XP_011512809 (OMIM: 602884) PREDICTED: GDP-mannose ( 222) 1429 338.9 6.8e-93
XP_011512808 (OMIM: 602884) PREDICTED: GDP-mannose ( 247) 1421 337.1 2.7e-92
XP_011512807 (OMIM: 602884) PREDICTED: GDP-mannose ( 250) 1421 337.1 2.7e-92
XP_011512805 (OMIM: 602884) PREDICTED: GDP-mannose ( 282) 1421 337.1 3e-92
NP_055120 (OMIM: 616145,616146) dTDP-D-glucose 4,6 ( 350) 220 59.9 1e-08
XP_011519368 (OMIM: 616145,616146) PREDICTED: dTDP ( 318) 217 59.2 1.5e-08
XP_011519367 (OMIM: 616145,616146) PREDICTED: dTDP ( 318) 217 59.2 1.5e-08
NP_001291359 (OMIM: 616145,616146) dTDP-D-glucose ( 318) 217 59.2 1.5e-08
NP_001008217 (OMIM: 230350,606953) UDP-glucose 4-e ( 348) 174 49.3 1.6e-05
NP_001121093 (OMIM: 230350,606953) UDP-glucose 4-e ( 348) 174 49.3 1.6e-05
NP_000394 (OMIM: 230350,606953) UDP-glucose 4-epim ( 348) 174 49.3 1.6e-05
NP_001240805 (OMIM: 609749) UDP-glucuronic acid de ( 252) 143 42.1 0.0017
XP_016860503 (OMIM: 609749) PREDICTED: UDP-glucuro ( 252) 143 42.1 0.0017
XP_016860502 (OMIM: 609749) PREDICTED: UDP-glucuro ( 312) 143 42.1 0.0021
>>NP_001491 (OMIM: 602884) GDP-mannose 4,6 dehydratase i (372 aa)
initn: 2492 init1: 2492 opt: 2492 Z-score: 3111.6 bits: 584.4 E(85289): 1.4e-166
Smith-Waterman score: 2492; 100.0% identity (100.0% similar) in 372 aa overlap (1-372:1-372)
10 20 30 40 50 60
pF1KE6 MAHAPARCPSARGSGDGEMGKPRNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAHAPARCPSARGSGDGEMGKPRNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 NTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 AEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 AAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE6 GNLDAKRDWGHAKDYVEAMWLMLQNDEPEDFVIATGEVHSVREFVEKSFLHIGKTIVWEG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GNLDAKRDWGHAKDYVEAMWLMLQNDEPEDFVIATGEVHSVREFVEKSFLHIGKTIVWEG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE6 KNENEVGRCKETGKVHVTVDLKYYRPTEVDFLQGDCTKAKQKLNWKPRVAFDELVREMVH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KNENEVGRCKETGKVHVTVDLKYYRPTEVDFLQGDCTKAKQKLNWKPRVAFDELVREMVH
310 320 330 340 350 360
370
pF1KE6 ADVELMRTNPNA
::::::::::::
NP_001 ADVELMRTNPNA
370
>>XP_011512802 (OMIM: 602884) PREDICTED: GDP-mannose 4,6 (342 aa)
initn: 2258 init1: 2258 opt: 2258 Z-score: 2820.2 bits: 530.4 E(85289): 2.4e-150
Smith-Waterman score: 2258; 99.7% identity (100.0% similar) in 339 aa overlap (34-372:4-342)
10 20 30 40 50 60
pF1KE6 APARCPSARGSGDGEMGKPRNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTG
.:::::::::::::::::::::::::::::
XP_011 MNLRDGSYLAEFLLEKGYEVHGIVRRSSSFNTG
10 20 30
70 80 90 100 110 120
pF1KE6 RIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEY
40 50 60 70 80 90
130 140 150 160 170 180
pF1KE6 TADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAK
100 110 120 130 140 150
190 200 210 220 230 240
pF1KE6 LYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNL
160 170 180 190 200 210
250 260 270 280 290 300
pF1KE6 DAKRDWGHAKDYVEAMWLMLQNDEPEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DAKRDWGHAKDYVEAMWLMLQNDEPEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNE
220 230 240 250 260 270
310 320 330 340 350 360
pF1KE6 NEVGRCKETGKVHVTVDLKYYRPTEVDFLQGDCTKAKQKLNWKPRVAFDELVREMVHADV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NEVGRCKETGKVHVTVDLKYYRPTEVDFLQGDCTKAKQKLNWKPRVAFDELVREMVHADV
280 290 300 310 320 330
370
pF1KE6 ELMRTNPNA
:::::::::
XP_011 ELMRTNPNA
340
>>NP_001240775 (OMIM: 602884) GDP-mannose 4,6 dehydratas (342 aa)
initn: 2257 init1: 2257 opt: 2257 Z-score: 2819.0 bits: 530.1 E(85289): 2.8e-150
Smith-Waterman score: 2257; 100.0% identity (100.0% similar) in 338 aa overlap (35-372:5-342)
10 20 30 40 50 60
pF1KE6 PARCPSARGSGDGEMGKPRNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGR
::::::::::::::::::::::::::::::
NP_001 MCKMDGSYLAEFLLEKGYEVHGIVRRSSSFNTGR
10 20 30
70 80 90 100 110 120
pF1KE6 IEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYT
40 50 60 70 80 90
130 140 150 160 170 180
pF1KE6 ADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKL
100 110 120 130 140 150
190 200 210 220 230 240
pF1KE6 YAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLD
160 170 180 190 200 210
250 260 270 280 290 300
pF1KE6 AKRDWGHAKDYVEAMWLMLQNDEPEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AKRDWGHAKDYVEAMWLMLQNDEPEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNEN
220 230 240 250 260 270
310 320 330 340 350 360
pF1KE6 EVGRCKETGKVHVTVDLKYYRPTEVDFLQGDCTKAKQKLNWKPRVAFDELVREMVHADVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EVGRCKETGKVHVTVDLKYYRPTEVDFLQGDCTKAKQKLNWKPRVAFDELVREMVHADVE
280 290 300 310 320 330
370
pF1KE6 LMRTNPNA
::::::::
NP_001 LMRTNPNA
340
>>XP_011512804 (OMIM: 602884) PREDICTED: GDP-mannose 4,6 (334 aa)
initn: 2196 init1: 2196 opt: 2196 Z-score: 2743.0 bits: 516.1 E(85289): 4.8e-146
Smith-Waterman score: 2196; 100.0% identity (100.0% similar) in 329 aa overlap (1-329:1-329)
10 20 30 40 50 60
pF1KE6 MAHAPARCPSARGSGDGEMGKPRNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MAHAPARCPSARGSGDGEMGKPRNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 NTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 AEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 AAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE6 GNLDAKRDWGHAKDYVEAMWLMLQNDEPEDFVIATGEVHSVREFVEKSFLHIGKTIVWEG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GNLDAKRDWGHAKDYVEAMWLMLQNDEPEDFVIATGEVHSVREFVEKSFLHIGKTIVWEG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE6 KNENEVGRCKETGKVHVTVDLKYYRPTEVDFLQGDCTKAKQKLNWKPRVAFDELVREMVH
:::::::::::::::::::::::::::::
XP_011 KNENEVGRCKETGKVHVTVDLKYYRPTEVVVCSL
310 320 330
>>XP_016866241 (OMIM: 602884) PREDICTED: GDP-mannose 4,6 (285 aa)
initn: 1725 init1: 1725 opt: 1725 Z-score: 2156.4 bits: 407.3 E(85289): 2.3e-113
Smith-Waterman score: 1725; 99.6% identity (100.0% similar) in 258 aa overlap (115-372:28-285)
90 100 110 120 130 140
pF1KE6 GDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGL
.:::::::::::::::::::::::::::::
XP_016 MMPTFQARNGLAGFSYLLLHLVCFNTYQISFDLAEYTADVDGVGTLRLLDAVKTCGL
10 20 30 40 50
150 160 170 180 190 200
pF1KE6 INSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVNG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 INSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVNG
60 70 80 90 100 110
210 220 230 240 250 260
pF1KE6 ILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQ
120 130 140 150 160 170
270 280 290 300 310 320
pF1KE6 NDEPEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVTVDLKYY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NDEPEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVTVDLKYY
180 190 200 210 220 230
330 340 350 360 370
pF1KE6 RPTEVDFLQGDCTKAKQKLNWKPRVAFDELVREMVHADVELMRTNPNA
::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RPTEVDFLQGDCTKAKQKLNWKPRVAFDELVREMVHADVELMRTNPNA
240 250 260 270 280
>>XP_006715129 (OMIM: 602884) PREDICTED: GDP-mannose 4,6 (290 aa)
initn: 1710 init1: 1710 opt: 1710 Z-score: 2137.6 bits: 403.8 E(85289): 2.5e-112
Smith-Waterman score: 1710; 100.0% identity (100.0% similar) in 257 aa overlap (1-257:1-257)
10 20 30 40 50 60
pF1KE6 MAHAPARCPSARGSGDGEMGKPRNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MAHAPARCPSARGSGDGEMGKPRNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 NTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 NTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 AEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 AEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 AAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 AAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE6 GNLDAKRDWGHAKDYVEAMWLMLQNDEPEDFVIATGEVHSVREFVEKSFLHIGKTIVWEG
:::::::::::::::::
XP_006 GNLDAKRDWGHAKDYVEHTSSQMSHSSGLWILIGSLLSYTRNPIFKNHCS
250 260 270 280 290
>>XP_011512809 (OMIM: 602884) PREDICTED: GDP-mannose 4,6 (222 aa)
initn: 1429 init1: 1429 opt: 1429 Z-score: 1788.7 bits: 338.9 E(85289): 6.8e-93
Smith-Waterman score: 1429; 100.0% identity (100.0% similar) in 215 aa overlap (1-215:1-215)
10 20 30 40 50 60
pF1KE6 MAHAPARCPSARGSGDGEMGKPRNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MAHAPARCPSARGSGDGEMGKPRNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 NTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 AEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 AAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSL
:::::::::::::::::::::::::::::::::::
XP_011 AAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGYVVDVAE
190 200 210 220
250 260 270 280 290 300
pF1KE6 GNLDAKRDWGHAKDYVEAMWLMLQNDEPEDFVIATGEVHSVREFVEKSFLHIGKTIVWEG
>>XP_011512808 (OMIM: 602884) PREDICTED: GDP-mannose 4,6 (247 aa)
initn: 1421 init1: 1421 opt: 1421 Z-score: 1778.0 bits: 337.1 E(85289): 2.7e-92
Smith-Waterman score: 1421; 100.0% identity (100.0% similar) in 214 aa overlap (1-214:1-214)
10 20 30 40 50 60
pF1KE6 MAHAPARCPSARGSGDGEMGKPRNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MAHAPARCPSARGSGDGEMGKPRNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 NTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 AEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 AAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSL
::::::::::::::::::::::::::::::::::
XP_011 AAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRAMRKQKQHEIELSKVVKPINANTETR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE6 GNLDAKRDWGHAKDYVEAMWLMLQNDEPEDFVIATGEVHSVREFVEKSFLHIGKTIVWEG
XP_011 NNPRRSH
>>XP_011512807 (OMIM: 602884) PREDICTED: GDP-mannose 4,6 (250 aa)
initn: 1421 init1: 1421 opt: 1421 Z-score: 1778.0 bits: 337.1 E(85289): 2.7e-92
Smith-Waterman score: 1421; 100.0% identity (100.0% similar) in 214 aa overlap (1-214:1-214)
10 20 30 40 50 60
pF1KE6 MAHAPARCPSARGSGDGEMGKPRNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MAHAPARCPSARGSGDGEMGKPRNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 NTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 AEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 AAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSL
::::::::::::::::::::::::::::::::::
XP_011 AAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRAMRKQKQHEIELSKVVKPINANTETR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE6 GNLDAKRDWGHAKDYVEAMWLMLQNDEPEDFVIATGEVHSVREFVEKSFLHIGKTIVWEG
XP_011 NNPRRSHLEN
250
>>XP_011512805 (OMIM: 602884) PREDICTED: GDP-mannose 4,6 (282 aa)
initn: 1421 init1: 1421 opt: 1421 Z-score: 1777.2 bits: 337.1 E(85289): 3e-92
Smith-Waterman score: 1421; 100.0% identity (100.0% similar) in 214 aa overlap (1-214:1-214)
10 20 30 40 50 60
pF1KE6 MAHAPARCPSARGSGDGEMGKPRNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MAHAPARCPSARGSGDGEMGKPRNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 NTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 AEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 AAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSL
::::::::::::::::::::::::::::::::::
XP_011 AAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRAMRKQKQHEIELSKVVKPINANTETR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE6 GNLDAKRDWGHAKDYVEAMWLMLQNDEPEDFVIATGEVHSVREFVEKSFLHIGKTIVWEG
XP_011 NNPRRSHVNIVHICGNNIYTNFRVELEQRNPCDTEWATSAWQ
250 260 270 280
372 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 11:57:47 2016 done: Tue Nov 8 11:57:47 2016
Total Scan time: 6.010 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]