Result of FASTA (omim) for
pFN21AE6292
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE6292, 301 aa
1>>>pF1KE6292 301 - 301 aa - 301 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.8807+/-0.000434; mu= 17.7098+/- 0.027
mean_var=62.1285+/-13.476, 0's: 0 Z-trim(109.9): 252 B-trim: 1514 in 2/55
Lambda= 0.162715
statistics sampled from 17900 (18200) to 17900 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.572), E-opt: 0.2 (0.213), width: 16
Scan time: 6.730
The best scores are: opt bits E(85289)
NP_114153 (OMIM: 608157) mitochondrial ornithine t ( 301) 1990 476.0 4e-134
NP_055067 (OMIM: 238970,603861) mitochondrial orni ( 301) 1775 425.5 6.3e-119
NP_000378 (OMIM: 212138,613698) mitochondrial carn ( 301) 524 131.8 1.6e-30
NP_872362 (OMIM: 610825) solute carrier family 25 ( 288) 462 117.3 3.7e-26
XP_011543249 (OMIM: 610825) PREDICTED: solute carr ( 246) 371 95.9 8.8e-20
XP_016873051 (OMIM: 610825) PREDICTED: solute carr ( 260) 371 95.9 9.2e-20
NP_001070709 (OMIM: 610825) solute carrier family ( 246) 346 90.0 5.1e-18
NP_001265180 (OMIM: 610825) solute carrier family ( 246) 346 90.0 5.1e-18
XP_016873058 (OMIM: 610825) PREDICTED: solute carr ( 246) 345 89.8 6e-18
XP_006718572 (OMIM: 610825) PREDICTED: solute carr ( 246) 345 89.8 6e-18
XP_011543245 (OMIM: 610825) PREDICTED: solute carr ( 246) 345 89.8 6e-18
XP_016873056 (OMIM: 610825) PREDICTED: solute carr ( 246) 345 89.8 6e-18
XP_016873053 (OMIM: 610825) PREDICTED: solute carr ( 246) 345 89.8 6e-18
XP_011543246 (OMIM: 610825) PREDICTED: solute carr ( 246) 345 89.8 6e-18
XP_011543251 (OMIM: 610825) PREDICTED: solute carr ( 246) 345 89.8 6e-18
XP_016873052 (OMIM: 610825) PREDICTED: solute carr ( 246) 345 89.8 6e-18
XP_016873057 (OMIM: 610825) PREDICTED: solute carr ( 246) 345 89.8 6e-18
XP_016873055 (OMIM: 610825) PREDICTED: solute carr ( 246) 345 89.8 6e-18
XP_006718573 (OMIM: 610825) PREDICTED: solute carr ( 246) 345 89.8 6e-18
XP_016873054 (OMIM: 610825) PREDICTED: solute carr ( 246) 345 89.8 6e-18
NP_001265179 (OMIM: 610825) solute carrier family ( 264) 340 88.6 1.4e-17
XP_011534746 (OMIM: 615064) PREDICTED: mitochondri ( 297) 313 82.3 1.3e-15
XP_006720102 (OMIM: 615064) PREDICTED: mitochondri ( 342) 313 82.3 1.4e-15
XP_011534745 (OMIM: 615064) PREDICTED: mitochondri ( 348) 313 82.4 1.4e-15
XP_006720101 (OMIM: 615064) PREDICTED: mitochondri ( 350) 313 82.4 1.5e-15
XP_016876468 (OMIM: 615064) PREDICTED: mitochondri ( 356) 313 82.4 1.5e-15
NP_001164641 (OMIM: 607571) mitochondrial 2-oxodic ( 298) 309 81.4 2.5e-15
NP_085134 (OMIM: 607571) mitochondrial 2-oxodicarb ( 299) 309 81.4 2.5e-15
XP_016876474 (OMIM: 615064) PREDICTED: mitochondri ( 237) 304 80.1 4.6e-15
XP_011534750 (OMIM: 615064) PREDICTED: mitochondri ( 237) 304 80.1 4.6e-15
XP_016876473 (OMIM: 615064) PREDICTED: mitochondri ( 237) 304 80.1 4.6e-15
XP_016876475 (OMIM: 615064) PREDICTED: mitochondri ( 237) 304 80.1 4.6e-15
XP_016876469 (OMIM: 615064) PREDICTED: mitochondri ( 237) 304 80.1 4.6e-15
XP_016876470 (OMIM: 615064) PREDICTED: mitochondri ( 237) 304 80.1 4.6e-15
XP_011534748 (OMIM: 615064) PREDICTED: mitochondri ( 237) 304 80.1 4.6e-15
XP_016876476 (OMIM: 615064) PREDICTED: mitochondri ( 237) 304 80.1 4.6e-15
XP_016876472 (OMIM: 615064) PREDICTED: mitochondri ( 237) 304 80.1 4.6e-15
XP_011534749 (OMIM: 615064) PREDICTED: mitochondri ( 237) 304 80.1 4.6e-15
NP_001278743 (OMIM: 615064) mitochondrial basic am ( 237) 304 80.1 4.6e-15
NP_001278742 (OMIM: 615064) mitochondrial basic am ( 237) 304 80.1 4.6e-15
XP_016876471 (OMIM: 615064) PREDICTED: mitochondri ( 237) 304 80.1 4.6e-15
NP_689546 (OMIM: 615064) mitochondrial basic amino ( 237) 304 80.1 4.6e-15
NP_110407 (OMIM: 610815,616839) mitochondrial fola ( 315) 291 77.2 4.8e-14
XP_011535589 (OMIM: 607571) PREDICTED: mitochondri ( 303) 290 76.9 5.5e-14
XP_011535590 (OMIM: 607571) PREDICTED: mitochondri ( 269) 287 76.2 8.1e-14
XP_016873060 (OMIM: 610825) PREDICTED: solute carr ( 184) 282 74.9 1.4e-13
XP_016873059 (OMIM: 610825) PREDICTED: solute carr ( 184) 282 74.9 1.4e-13
NP_001287749 (OMIM: 610825) solute carrier family ( 226) 283 75.2 1.4e-13
XP_016856593 (OMIM: 608744) PREDICTED: calcium-bin ( 271) 277 73.8 4.2e-13
NP_001034444 (OMIM: 615064) mitochondrial basic am ( 303) 249 67.3 4.3e-11
>>NP_114153 (OMIM: 608157) mitochondrial ornithine trans (301 aa)
initn: 1990 init1: 1990 opt: 1990 Z-score: 2528.9 bits: 476.0 E(85289): 4e-134
Smith-Waterman score: 1990; 100.0% identity (100.0% similar) in 301 aa overlap (1-301:1-301)
10 20 30 40 50 60
pF1KE6 MKSGPGIQAAIDLTAGAAGGTACVLTGQPFDTIKVKMQTFPDLYKGLTDCFLKTYAQVGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_114 MKSGPGIQAAIDLTAGAAGGTACVLTGQPFDTIKVKMQTFPDLYKGLTDCFLKTYAQVGL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 RGFYKGTGPALMAYVAENSVLFMCYGFCQQFVRKVAGMDKQAKLSDLQTAAAGSFASAFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_114 RGFYKGTGPALMAYVAENSVLFMCYGFCQQFVRKVAGMDKQAKLSDLQTAAAGSFASAFA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 ALALCPTELVKCRLQTMYEMEMSGKIAKSHNTIWSVVKGILKKDGPLGFYHGLSSTLLQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_114 ALALCPTELVKCRLQTMYEMEMSGKIAKSHNTIWSVVKGILKKDGPLGFYHGLSSTLLQE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 VPGYFFFFGGYELSRSFFASGRSKDELGPVHLMLSGGVAGICLWLVVFPVDCIKSRIQVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_114 VPGYFFFFGGYELSRSFFASGRSKDELGPVHLMLSGGVAGICLWLVVFPVDCIKSRIQVL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE6 SMYGKQAGFIGTLLSVVRNEGIVALYSGLKATMIRAIPANGALFVAYEYSRKMMMKQLEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_114 SMYGKQAGFIGTLLSVVRNEGIVALYSGLKATMIRAIPANGALFVAYEYSRKMMMKQLEA
250 260 270 280 290 300
pF1KE6 Y
:
NP_114 Y
>>NP_055067 (OMIM: 238970,603861) mitochondrial ornithin (301 aa)
initn: 1775 init1: 1775 opt: 1775 Z-score: 2256.2 bits: 425.5 E(85289): 6.3e-119
Smith-Waterman score: 1775; 87.4% identity (97.3% similar) in 301 aa overlap (1-301:1-301)
10 20 30 40 50 60
pF1KE6 MKSGPGIQAAIDLTAGAAGGTACVLTGQPFDTIKVKMQTFPDLYKGLTDCFLKTYAQVGL
:::.:.::::::::::::::::::::::::::.:::::::::::.::::: ::::.:::.
NP_055 MKSNPAIQAAIDLTAGAAGGTACVLTGQPFDTMKVKMQTFPDLYRGLTDCCLKTYSQVGF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 RGFYKGTGPALMAYVAENSVLFMCYGFCQQFVRKVAGMDKQAKLSDLQTAAAGSFASAFA
:::::::.:::.: .::::::::::::::: ::::::.::::::::::.:::::::::::
NP_055 RGFYKGTSPALIANIAENSVLFMCYGFCQQVVRKVAGLDKQAKLSDLQNAAAGSFASAFA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 ALALCPTELVKCRLQTMYEMEMSGKIAKSHNTIWSVVKGILKKDGPLGFYHGLSSTLLQE
::.:::::::::::::::::: :::::::.::.:::.:.::.::::::::::::::::.:
NP_055 ALVLCPTELVKCRLQTMYEMETSGKIAKSQNTVWSVIKSILRKDGPLGFYHGLSSTLLRE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 VPGYFFFFGGYELSRSFFASGRSKDELGPVHLMLSGGVAGICLWLVVFPVDCIKSRIQVL
:::::::::::::::::::::::::::::: :::::::.::::::.:.::::::::::::
NP_055 VPGYFFFFGGYELSRSFFASGRSKDELGPVPLMLSGGVGGICLWLAVYPVDCIKSRIQVL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE6 SMYGKQAGFIGTLLSVVRNEGIVALYSGLKATMIRAIPANGALFVAYEYSRKMMMKQLEA
:: ::::::: :...::.::::.::::::: :::::.:::::::.:::::::.::.::::
NP_055 SMSGKQAGFIRTFINVVKNEGITALYSGLKPTMIRAFPANGALFLAYEYSRKLMMNQLEA
250 260 270 280 290 300
pF1KE6 Y
:
NP_055 Y
>>NP_000378 (OMIM: 212138,613698) mitochondrial carnitin (301 aa)
initn: 553 init1: 237 opt: 524 Z-score: 669.0 bits: 131.8 E(85289): 1.6e-30
Smith-Waterman score: 524; 33.0% identity (65.3% similar) in 291 aa overlap (12-294:13-294)
10 20 30 40 50
pF1KE6 MKSGPGIQAAIDLTAGAAGGTACVLTGQPFDTIKVKMQTFPD-------LYKGLTDCFL
.: ::. ::. :..:.:.::.::..:: : .:.: :::
NP_000 MADQPKPISPLKNLLAGGFGGVCLVFVGHPLDTVKVRLQTQPPSLPGQPPMYSGTFDCFR
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE6 KTYAQVGLRGFYKGTGPALMAYVAENSVLFMCYGFCQQFVRKVAGMDKQAKLSDLQTAAA
:: . :. :.:.: . ... . .: :. .:. ... .: . :: : ::
NP_000 KTLFREGITGLYRGMAAPIIGVTPMFAVCFFGFGLGKKLQQK----HPEDVLSYPQLFAA
70 80 90 100 110
120 130 140 150 160 170
pF1KE6 GSFASAFAALALCPTELVKCRLQTMYEMEMSGKIAKSHNTIWSVVKGILKKDGPLGFYHG
: ....:.. . : : .:: :: .. :. .: .:. . .: . .. : :.:.:
NP_000 GMLSGVFTTGIMTPGERIKCLLQ----IQASSGESKYTGTL-DCAKKLYQEFGIRGIYKG
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE6 LSSTLLQEVPGYFFFFGGYELSRSFFAS-GRSKDELGPVHLMLSGGVAGICLWLVVFPVD
::...::. ..: :: ...:. :. .::. .....::.::: : :..: :
NP_000 TVLTLMRDVPASGMYFMTYEWLKNIFTPEGKRVSELSAPRILVAGGIAGIFNWAVAIPPD
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE6 CIKSRIQVLSMYGKQAGFIGTLLSVVRNEGIVALYSGLKATMIRAIPANGALFVAYEYSR
.:::.:. :: .: ..:.::...::.:..:.::::.:::.: :...: .
NP_000 VLKSRFQTAPPGKYPNGFRDVLRELIRDEGVTSLYKGFNAVMIRAFPANAACFLGFEVAM
240 250 260 270 280 290
300
pF1KE6 KMMMKQLEAY
:..
NP_000 KFLNWATPNL
300
>>NP_872362 (OMIM: 610825) solute carrier family 25 memb (288 aa)
initn: 301 init1: 115 opt: 462 Z-score: 590.6 bits: 117.3 E(85289): 3.7e-26
Smith-Waterman score: 462; 29.4% identity (64.5% similar) in 282 aa overlap (12-289:5-282)
10 20 30 40 50 60
pF1KE6 MKSGPGIQAAIDLTAGAAGGTACVLTGQPFDTIKVKMQTFPDLYKGLTDCFLKTYAQVGL
...:: .:. .. :.::::.::..:: :.:..::..: : . .:
NP_872 MPVEEFVAGWISGALGLVLGHPFDTVKVRLQT-QTTYRGIVDCMVKIYRHESL
10 20 30 40 50
70 80 90 100 110
pF1KE6 RGFYKGTGPALMAYVAENSVLFMCYGFCQQFVRKVAGMDKQAKL-SDLQTAAAGSFASAF
::.:: . . . .. ::::: :. . .. ....:. : .. :: .. .
NP_872 LGFFKGMSFPIASIAVVNSVLFGVYSNTLLVLTATSHQERRAQPPSYMHIFLAGCTGGFL
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE6 AALALCPTELVKCRLQTMYEMEMS-GKIAKSHNTIWSVVKGILKKDGPLGFYHGLSSTLL
: : : .:.: :::.. : . . :. .. . .:....:: :...: . :
NP_872 QAYCLAPFDLIKVRLQNQTEPRAQPGSPPPRYQGPVHCAASIFREEGPRGLFRGAWALTL
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE6 QEVPGYFFFFGGYE-LSRSFFASGRSKDELGPVHLMLSGGVAGICLWLVVFPVDCIKSRI
...: ..: :: : :.. :.. . . ....:: ::: :... :.: ::::.
NP_872 RDTPTVGIYFITYEGLCRQYTPEGQNPSS---ATVLVAGGFAGIASWVAATPLDVIKSRM
180 190 200 210 220
240 250 260 270 280 290
pF1KE6 QVLSMYGK-QAGFIGTLLSVVRNEGIVALYSGLKATMIRAIPANGALFVAYEYSRKMMMK
:. .. . :.. ..: .:.::. ... :. . ::.:.:.. :..:::
NP_872 QMDGLRRRVYQGMLDCMVSSIRQEGLGVFFRGVTINSARAFPVNAVTFLSYEYLLRWWG
230 240 250 260 270 280
300
pF1KE6 QLEAY
>>XP_011543249 (OMIM: 610825) PREDICTED: solute carrier (246 aa)
initn: 209 init1: 115 opt: 371 Z-score: 476.2 bits: 95.9 E(85289): 8.8e-20
Smith-Waterman score: 371; 29.9% identity (63.6% similar) in 231 aa overlap (12-239:5-231)
10 20 30 40 50 60
pF1KE6 MKSGPGIQAAIDLTAGAAGGTACVLTGQPFDTIKVKMQTFPDLYKGLTDCFLKTYAQVGL
...:: .:. .. :.::::.::..:: :.:..::..: : . .:
XP_011 MPVEEFVAGWISGALGLVLGHPFDTVKVRLQT-QTTYRGIVDCMVKIYRHESL
10 20 30 40 50
70 80 90 100 110
pF1KE6 RGFYKGTGPALMAYVAENSVLFMCYGFCQQFVRKVAGMDKQAKL-SDLQTAAAGSFASAF
::.:: . . . .. ::::: :. . .. ....:. : .. :: .. .
XP_011 LGFFKGMSFPIASIAVVNSVLFGVYSNTLLVLTATSHQERRAQPPSYMHIFLAGCTGGFL
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE6 AALALCPTELVKCRLQTMYEMEMS-GKIAKSHNTIWSVVKGILKKDGPLGFYHGLSSTLL
: : : .:.: :::.. : . . :. .. . .:....:: :...: . :
XP_011 QAYCLAPFDLIKVRLQNQTEPRAQPGSPPPRYQGPVHCAASIFREEGPRGLFRGAWALTL
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE6 QEVPGYFFFFGGYE-LSRSFFASGRSKDELGPVHLMLSGGVAGICLWLVVFPVDCIKSRI
...: ..: :: : :.. :.. . . ....:: ::: :... :.: ::::.
XP_011 RDTPTVGIYFITYEGLCRQYTPEGQNPSS---ATVLVAGGFAGIASWVAATPLDMIKSRM
180 190 200 210 220
240 250 260 270 280 290
pF1KE6 QVLSMYGKQAGFIGTLLSVVRNEGIVALYSGLKATMIRAIPANGALFVAYEYSRKMMMKQ
:.
XP_011 QMDGLRRRVYQGMLDCM
230 240
>>XP_016873051 (OMIM: 610825) PREDICTED: solute carrier (260 aa)
initn: 209 init1: 115 opt: 371 Z-score: 475.8 bits: 95.9 E(85289): 9.2e-20
Smith-Waterman score: 371; 29.9% identity (63.6% similar) in 231 aa overlap (12-239:5-231)
10 20 30 40 50 60
pF1KE6 MKSGPGIQAAIDLTAGAAGGTACVLTGQPFDTIKVKMQTFPDLYKGLTDCFLKTYAQVGL
...:: .:. .. :.::::.::..:: :.:..::..: : . .:
XP_016 MPVEEFVAGWISGALGLVLGHPFDTVKVRLQT-QTTYRGIVDCMVKIYRHESL
10 20 30 40 50
70 80 90 100 110
pF1KE6 RGFYKGTGPALMAYVAENSVLFMCYGFCQQFVRKVAGMDKQAKL-SDLQTAAAGSFASAF
::.:: . . . .. ::::: :. . .. ....:. : .. :: .. .
XP_016 LGFFKGMSFPIASIAVVNSVLFGVYSNTLLVLTATSHQERRAQPPSYMHIFLAGCTGGFL
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE6 AALALCPTELVKCRLQTMYEMEMS-GKIAKSHNTIWSVVKGILKKDGPLGFYHGLSSTLL
: : : .:.: :::.. : . . :. .. . .:....:: :...: . :
XP_016 QAYCLAPFDLIKVRLQNQTEPRAQPGSPPPRYQGPVHCAASIFREEGPRGLFRGAWALTL
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE6 QEVPGYFFFFGGYE-LSRSFFASGRSKDELGPVHLMLSGGVAGICLWLVVFPVDCIKSRI
...: ..: :: : :.. :.. . . ....:: ::: :... :.: ::::.
XP_016 RDTPTVGIYFITYEGLCRQYTPEGQNPSS---ATVLVAGGFAGIASWVAATPLDMIKSRM
180 190 200 210 220
240 250 260 270 280 290
pF1KE6 QVLSMYGKQAGFIGTLLSVVRNEGIVALYSGLKATMIRAIPANGALFVAYEYSRKMMMKQ
:.
XP_016 QMDGLRRRVYQGMLDCMRQGFTMSARMVLIS
230 240 250 260
>>NP_001070709 (OMIM: 610825) solute carrier family 25 m (246 aa)
initn: 259 init1: 106 opt: 346 Z-score: 444.5 bits: 90.0 E(85289): 5.1e-18
Smith-Waterman score: 346; 27.7% identity (62.4% similar) in 242 aa overlap (52-289:2-240)
30 40 50 60 70 80
pF1KE6 ACVLTGQPFDTIKVKMQTFPDLYKGLTDCFLKTYAQVGLRGFYKGTGPALMAYVAENSVL
.: : . .: ::.:: . . . .. ::::
NP_001 MVKIYRHESLLGFFKGMSFPIASIAVVNSVL
10 20 30
90 100 110 120 130 140
pF1KE6 FMCYGFCQQFVRKVAGMDKQAKL-SDLQTAAAGSFASAFAALALCPTELVKCRLQTMYEM
: :. . .. ....:. : .. :: .. . : : : .:.: :::.. :
NP_001 FGVYSNTLLVLTATSHQERRAQPPSYMHIFLAGCTGGFLQAYCLAPFDLIKVRLQNQTEP
40 50 60 70 80 90
150 160 170 180 190
pF1KE6 EMS-GKIAKSHNTIWSVVKGILKKDGPLGFYHGLSSTLLQEVPGYFFFFGGYE-LSRSFF
. . :. .. . .:....:: :...: . :...: ..: :: : :..
NP_001 RAQPGSPPPRYQGPVHCAASIFREEGPRGLFRGAWALTLRDTPTVGIYFITYEGLCRQYT
100 110 120 130 140 150
200 210 220 230 240 250
pF1KE6 ASGRSKDELGPVHLMLSGGVAGICLWLVVFPVDCIKSRIQVLSMYGK-QAGFIGTLLSVV
:.. . . ....:: ::: :... :.: ::::.:. .. . :.. ..: .
NP_001 PEGQNPSS---ATVLVAGGFAGIASWVAATPLDVIKSRMQMDGLRRRVYQGMLDCMVSSI
160 170 180 190 200
260 270 280 290 300
pF1KE6 RNEGIVALYSGLKATMIRAIPANGALFVAYEYSRKMMMKQLEAY
:.::. ... :. . ::.:.:.. :..:::
NP_001 RQEGLGVFFRGVTINSARAFPVNAVTFLSYEYLLRWWG
210 220 230 240
>>NP_001265180 (OMIM: 610825) solute carrier family 25 m (246 aa)
initn: 259 init1: 106 opt: 346 Z-score: 444.5 bits: 90.0 E(85289): 5.1e-18
Smith-Waterman score: 346; 27.7% identity (62.4% similar) in 242 aa overlap (52-289:2-240)
30 40 50 60 70 80
pF1KE6 ACVLTGQPFDTIKVKMQTFPDLYKGLTDCFLKTYAQVGLRGFYKGTGPALMAYVAENSVL
.: : . .: ::.:: . . . .. ::::
NP_001 MVKIYRHESLLGFFKGMSFPIASIAVVNSVL
10 20 30
90 100 110 120 130 140
pF1KE6 FMCYGFCQQFVRKVAGMDKQAKL-SDLQTAAAGSFASAFAALALCPTELVKCRLQTMYEM
: :. . .. ....:. : .. :: .. . : : : .:.: :::.. :
NP_001 FGVYSNTLLVLTATSHQERRAQPPSYMHIFLAGCTGGFLQAYCLAPFDLIKVRLQNQTEP
40 50 60 70 80 90
150 160 170 180 190
pF1KE6 EMS-GKIAKSHNTIWSVVKGILKKDGPLGFYHGLSSTLLQEVPGYFFFFGGYE-LSRSFF
. . :. .. . .:....:: :...: . :...: ..: :: : :..
NP_001 RAQPGSPPPRYQGPVHCAASIFREEGPRGLFRGAWALTLRDTPTVGIYFITYEGLCRQYT
100 110 120 130 140 150
200 210 220 230 240 250
pF1KE6 ASGRSKDELGPVHLMLSGGVAGICLWLVVFPVDCIKSRIQVLSMYGK-QAGFIGTLLSVV
:.. . . ....:: ::: :... :.: ::::.:. .. . :.. ..: .
NP_001 PEGQNPSS---ATVLVAGGFAGIASWVAATPLDVIKSRMQMDGLRRRVYQGMLDCMVSSI
160 170 180 190 200
260 270 280 290 300
pF1KE6 RNEGIVALYSGLKATMIRAIPANGALFVAYEYSRKMMMKQLEAY
:.::. ... :. . ::.:.:.. :..:::
NP_001 RQEGLGVFFRGVTINSARAFPVNAVTFLSYEYLLRWWG
210 220 230 240
>>XP_016873058 (OMIM: 610825) PREDICTED: solute carrier (246 aa)
initn: 258 init1: 106 opt: 345 Z-score: 443.2 bits: 89.8 E(85289): 6e-18
Smith-Waterman score: 345; 27.7% identity (62.4% similar) in 242 aa overlap (52-289:2-240)
30 40 50 60 70 80
pF1KE6 ACVLTGQPFDTIKVKMQTFPDLYKGLTDCFLKTYAQVGLRGFYKGTGPALMAYVAENSVL
.: : . .: ::.:: . . . .. ::::
XP_016 MVKIYRHESLLGFFKGMSFPIASIAVVNSVL
10 20 30
90 100 110 120 130 140
pF1KE6 FMCYGFCQQFVRKVAGMDKQAKL-SDLQTAAAGSFASAFAALALCPTELVKCRLQTMYEM
: :. . .. ....:. : .. :: .. . : : : .:.: :::.. :
XP_016 FGVYSNTLLVLTATSHQERRAQPPSYMHIFLAGCTGGFLQAYCLAPFDLIKVRLQNQTEP
40 50 60 70 80 90
150 160 170 180 190
pF1KE6 EMS-GKIAKSHNTIWSVVKGILKKDGPLGFYHGLSSTLLQEVPGYFFFFGGYE-LSRSFF
. . :. .. . .:....:: :...: . :...: ..: :: : :..
XP_016 RAQPGSPPPRYQGPVHCAASIFREEGPRGLFRGAWALTLRDTPTVGIYFITYEGLCRQYT
100 110 120 130 140 150
200 210 220 230 240 250
pF1KE6 ASGRSKDELGPVHLMLSGGVAGICLWLVVFPVDCIKSRIQVLSMYGK-QAGFIGTLLSVV
:.. . . ....:: ::: :... :.: ::::.:. .. . :.. ..: .
XP_016 PEGQNPSS---ATVLVAGGFAGIASWVAATPLDMIKSRMQMDGLRRRVYQGMLDCMVSSI
160 170 180 190 200
260 270 280 290 300
pF1KE6 RNEGIVALYSGLKATMIRAIPANGALFVAYEYSRKMMMKQLEAY
:.::. ... :. . ::.:.:.. :..:::
XP_016 RQEGLGVFFRGVTINSARAFPVNAVTFLSYEYLLRWWG
210 220 230 240
>>XP_006718572 (OMIM: 610825) PREDICTED: solute carrier (246 aa)
initn: 258 init1: 106 opt: 345 Z-score: 443.2 bits: 89.8 E(85289): 6e-18
Smith-Waterman score: 345; 27.7% identity (62.4% similar) in 242 aa overlap (52-289:2-240)
30 40 50 60 70 80
pF1KE6 ACVLTGQPFDTIKVKMQTFPDLYKGLTDCFLKTYAQVGLRGFYKGTGPALMAYVAENSVL
.: : . .: ::.:: . . . .. ::::
XP_006 MVKIYRHESLLGFFKGMSFPIASIAVVNSVL
10 20 30
90 100 110 120 130 140
pF1KE6 FMCYGFCQQFVRKVAGMDKQAKL-SDLQTAAAGSFASAFAALALCPTELVKCRLQTMYEM
: :. . .. ....:. : .. :: .. . : : : .:.: :::.. :
XP_006 FGVYSNTLLVLTATSHQERRAQPPSYMHIFLAGCTGGFLQAYCLAPFDLIKVRLQNQTEP
40 50 60 70 80 90
150 160 170 180 190
pF1KE6 EMS-GKIAKSHNTIWSVVKGILKKDGPLGFYHGLSSTLLQEVPGYFFFFGGYE-LSRSFF
. . :. .. . .:....:: :...: . :...: ..: :: : :..
XP_006 RAQPGSPPPRYQGPVHCAASIFREEGPRGLFRGAWALTLRDTPTVGIYFITYEGLCRQYT
100 110 120 130 140 150
200 210 220 230 240 250
pF1KE6 ASGRSKDELGPVHLMLSGGVAGICLWLVVFPVDCIKSRIQVLSMYGK-QAGFIGTLLSVV
:.. . . ....:: ::: :... :.: ::::.:. .. . :.. ..: .
XP_006 PEGQNPSS---ATVLVAGGFAGIASWVAATPLDMIKSRMQMDGLRRRVYQGMLDCMVSSI
160 170 180 190 200
260 270 280 290 300
pF1KE6 RNEGIVALYSGLKATMIRAIPANGALFVAYEYSRKMMMKQLEAY
:.::. ... :. . ::.:.:.. :..:::
XP_006 RQEGLGVFFRGVTINSARAFPVNAVTFLSYEYLLRWWG
210 220 230 240
301 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 11:50:59 2016 done: Tue Nov 8 11:51:00 2016
Total Scan time: 6.730 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]