Result of FASTA (omim) for
pFN21AE6262
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE6262, 278 aa
1>>>pF1KE6262 278 - 278 aa - 278 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.3032+/-0.000332; mu= 15.5408+/- 0.021
mean_var=65.0484+/-13.138, 0's: 0 Z-trim(115.1): 36 B-trim: 100 in 1/54
Lambda= 0.159022
statistics sampled from 25319 (25355) to 25319 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.678), E-opt: 0.2 (0.297), width: 16
Scan time: 4.640
The best scores are: opt bits E(85289)
NP_000361 (OMIM: 277460,600415) alpha-tocopherol t ( 278) 1860 435.1 6.8e-122
XP_006716531 (OMIM: 277460,600415) PREDICTED: alph ( 162) 636 154.2 1.5e-37
XP_016868631 (OMIM: 611292) PREDICTED: clavesin-1 ( 354) 481 118.8 1.4e-26
NP_775790 (OMIM: 611292) clavesin-1 [Homo sapiens] ( 354) 481 118.8 1.4e-26
XP_016868630 (OMIM: 611292) PREDICTED: clavesin-1 ( 354) 481 118.8 1.4e-26
NP_001010852 (OMIM: 616945) clavesin-2 [Homo sapie ( 327) 480 118.6 1.6e-26
XP_016865755 (OMIM: 616945) PREDICTED: clavesin-2 ( 327) 480 118.6 1.6e-26
XP_011520172 (OMIM: 136880,180090,607475,607476) P ( 317) 441 109.6 7.6e-24
NP_000317 (OMIM: 136880,180090,607475,607476) reti ( 317) 441 109.6 7.6e-24
XP_016877949 (OMIM: 136880,180090,607475,607476) P ( 326) 441 109.6 7.8e-24
NP_002824 (OMIM: 600768) tyrosine-protein phosphat ( 593) 310 79.7 1.4e-14
XP_016884280 (OMIM: 612825) PREDICTED: SEC14-like ( 352) 238 63.1 8.7e-10
XP_006724298 (OMIM: 612825) PREDICTED: SEC14-like ( 352) 238 63.1 8.7e-10
XP_016884278 (OMIM: 612825) PREDICTED: SEC14-like ( 352) 238 63.1 8.7e-10
XP_011528466 (OMIM: 612825) PREDICTED: SEC14-like ( 391) 238 63.1 9.5e-10
NP_203740 (OMIM: 607558) SEC14-like protein 2 isof ( 392) 238 63.1 9.5e-10
NP_036561 (OMIM: 607558) SEC14-like protein 2 isof ( 403) 238 63.1 9.7e-10
NP_001278861 (OMIM: 607558) SEC14-like protein 2 i ( 349) 227 60.5 4.9e-09
NP_001191133 (OMIM: 607558) SEC14-like protein 2 i ( 320) 217 58.2 2.3e-08
NP_001244308 (OMIM: 612824) SEC14-like protein 3 i ( 341) 215 57.8 3.3e-08
NP_001244311 (OMIM: 612824) SEC14-like protein 3 i ( 341) 215 57.8 3.3e-08
NP_777635 (OMIM: 612824) SEC14-like protein 3 isof ( 400) 215 57.8 3.7e-08
XP_011528430 (OMIM: 612824) PREDICTED: SEC14-like ( 412) 215 57.8 3.8e-08
NP_001244307 (OMIM: 612824) SEC14-like protein 3 i ( 323) 201 54.6 2.9e-07
NP_001154840 (OMIM: 612825) SEC14-like protein 4 i ( 360) 164 46.1 0.00011
NP_777637 (OMIM: 612825) SEC14-like protein 4 isof ( 406) 164 46.1 0.00013
XP_016884279 (OMIM: 612825) PREDICTED: SEC14-like ( 247) 148 42.3 0.0011
XP_016884277 (OMIM: 612825) PREDICTED: SEC14-like ( 437) 148 42.5 0.0017
XP_016884276 (OMIM: 612825) PREDICTED: SEC14-like ( 465) 148 42.5 0.0018
>>NP_000361 (OMIM: 277460,600415) alpha-tocopherol trans (278 aa)
initn: 1860 init1: 1860 opt: 1860 Z-score: 2309.4 bits: 435.1 E(85289): 6.8e-122
Smith-Waterman score: 1860; 100.0% identity (100.0% similar) in 278 aa overlap (1-278:1-278)
10 20 30 40 50 60
pF1KE6 MAEARSQPSAGPQLNALPDHSPLLQPGLAALRRRAREAGVPLAPLPLTDSFLLRFLRARD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 MAEARSQPSAGPQLNALPDHSPLLQPGLAALRRRAREAGVPLAPLPLTDSFLLRFLRARD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 FDLDLAWRLLKNYYKWRAECPEISADLHPRSIIGLLKAGYHGVLRSRDPTGSKVLIYRIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 FDLDLAWRLLKNYYKWRAECPEISADLHPRSIIGLLKAGYHGVLRSRDPTGSKVLIYRIA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 HWDPKVFTAYDVFRVSLITSELIVQEVETQRNGIKAIFDLEGWQFSHAFQITPSVAKKIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 HWDPKVFTAYDVFRVSLITSELIVQEVETQRNGIKAIFDLEGWQFSHAFQITPSVAKKIA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 AVLTDSFPLKVRGIHLINEPVIFHAVFSMIKPFLTEKIKERIHMHGNNYKQSLLQHFPDI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 AVLTDSFPLKVRGIHLINEPVIFHAVFSMIKPFLTEKIKERIHMHGNNYKQSLLQHFPDI
190 200 210 220 230 240
250 260 270
pF1KE6 LPLEYGGEEFSMEDICQEWTNFIMKSEDYLSSISESIQ
::::::::::::::::::::::::::::::::::::::
NP_000 LPLEYGGEEFSMEDICQEWTNFIMKSEDYLSSISESIQ
250 260 270
>>XP_006716531 (OMIM: 277460,600415) PREDICTED: alpha-to (162 aa)
initn: 1080 init1: 636 opt: 636 Z-score: 795.3 bits: 154.2 E(85289): 1.5e-37
Smith-Waterman score: 852; 58.3% identity (58.3% similar) in 278 aa overlap (1-278:1-162)
10 20 30 40 50 60
pF1KE6 MAEARSQPSAGPQLNALPDHSPLLQPGLAALRRRAREAGVPLAPLPLTDSFLLRFLRARD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MAEARSQPSAGPQLNALPDHSPLLQPGLAALRRRAREAGVPLAPLPLTDSFLLRFLRARD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 FDLDLAWRLLKNYYKWRAECPEISADLHPRSIIGLLKAGYHGVLRSRDPTGSKVLIYRIA
::::::::
XP_006 FDLDLAWR----------------------------------------------------
130 140 150 160 170 180
pF1KE6 HWDPKVFTAYDVFRVSLITSELIVQEVETQRNGIKAIFDLEGWQFSHAFQITPSVAKKIA
XP_006 ------------------------------------------------------------
190 200 210 220 230 240
pF1KE6 AVLTDSFPLKVRGIHLINEPVIFHAVFSMIKPFLTEKIKERIHMHGNNYKQSLLQHFPDI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 ----DSFPLKVRGIHLINEPVIFHAVFSMIKPFLTEKIKERIHMHGNNYKQSLLQHFPDI
70 80 90 100 110 120
250 260 270
pF1KE6 LPLEYGGEEFSMEDICQEWTNFIMKSEDYLSSISESIQ
::::::::::::::::::::::::::::::::::::::
XP_006 LPLEYGGEEFSMEDICQEWTNFIMKSEDYLSSISESIQ
130 140 150 160
>>XP_016868631 (OMIM: 611292) PREDICTED: clavesin-1 isof (354 aa)
initn: 491 init1: 399 opt: 481 Z-score: 598.0 bits: 118.8 E(85289): 1.4e-26
Smith-Waterman score: 481; 38.4% identity (69.0% similar) in 203 aa overlap (49-247:73-273)
20 30 40 50 60 70
pF1KE6 DHSPLLQPGLAALRRRAREAGVPLAPLPLTDSFLLRFLRARDFDLDLAWRLLKNYYKWRA
:.:.::::::: : :.::: .:...:
XP_016 NENPDVLHQDIQQVRDMIITRPDIGFLRTDDAFILRFLRARKFHQADAFRLLAQYFQYRQ
50 60 70 80 90 100
80 90 100 110 120 130
pF1KE6 ECPEISADLHPRSIIGLLKA---GYHGVLRSRDPTGSKVLIYRIAHWDPKVFTAYDVFRV
.. ... . :. .: :. :::..:: : :.:. :.:: . . :..:.
XP_016 LNLDMFKNFKADDP-GIKRALIDGFPGVLENRDHYGRKILLLFAANWDQSRNSFTDILRA
110 120 130 140 150 160
140 150 160 170 180 190
pF1KE6 SLITSELIVQEVETQRNGIKAIFDLEGWQFSHAFQITPSVAKKIAAVLTDSFPLKVRGIH
:.. :..... : : ::. :.: ...:..: ..:::. : : :::: . :.:
XP_016 ILLSLEVLIEDPELQINGFILIIDWSNFSFKQASKLTPSILKLAIEGLQDSFPARFGGVH
170 180 190 200 210 220
200 210 220 230 240 250
pF1KE6 LINEPVIFHAVFSMIKPFLTEKIKERIHMHGNNYKQSLLQHF-PDILPLEYGGEEFSMED
..:.: .::....::::: .: ..:: .:::: . :: : . :..:: :.::
XP_016 FVNQPWYIHALYTLIKPFLKDKTRKRIFLHGNNLN-SLHQLIHPEFLPSEFGGTLPPYDM
230 240 250 260 270 280
260 270
pF1KE6 ICQEWTNFIMKSEDYLSSISESIQ
XP_016 GTWARTLLGPDYSDENDYTHTSYNAMHVKHTSSNLERECSPKLMKRSQSVVEAGTLKHEE
290 300 310 320 330 340
>>NP_775790 (OMIM: 611292) clavesin-1 [Homo sapiens] (354 aa)
initn: 491 init1: 399 opt: 481 Z-score: 598.0 bits: 118.8 E(85289): 1.4e-26
Smith-Waterman score: 481; 38.4% identity (69.0% similar) in 203 aa overlap (49-247:73-273)
20 30 40 50 60 70
pF1KE6 DHSPLLQPGLAALRRRAREAGVPLAPLPLTDSFLLRFLRARDFDLDLAWRLLKNYYKWRA
:.:.::::::: : :.::: .:...:
NP_775 NENPDVLHQDIQQVRDMIITRPDIGFLRTDDAFILRFLRARKFHQADAFRLLAQYFQYRQ
50 60 70 80 90 100
80 90 100 110 120 130
pF1KE6 ECPEISADLHPRSIIGLLKA---GYHGVLRSRDPTGSKVLIYRIAHWDPKVFTAYDVFRV
.. ... . :. .: :. :::..:: : :.:. :.:: . . :..:.
NP_775 LNLDMFKNFKADDP-GIKRALIDGFPGVLENRDHYGRKILLLFAANWDQSRNSFTDILRA
110 120 130 140 150 160
140 150 160 170 180 190
pF1KE6 SLITSELIVQEVETQRNGIKAIFDLEGWQFSHAFQITPSVAKKIAAVLTDSFPLKVRGIH
:.. :..... : : ::. :.: ...:..: ..:::. : : :::: . :.:
NP_775 ILLSLEVLIEDPELQINGFILIIDWSNFSFKQASKLTPSILKLAIEGLQDSFPARFGGVH
170 180 190 200 210 220
200 210 220 230 240 250
pF1KE6 LINEPVIFHAVFSMIKPFLTEKIKERIHMHGNNYKQSLLQHF-PDILPLEYGGEEFSMED
..:.: .::....::::: .: ..:: .:::: . :: : . :..:: :.::
NP_775 FVNQPWYIHALYTLIKPFLKDKTRKRIFLHGNNLN-SLHQLIHPEFLPSEFGGTLPPYDM
230 240 250 260 270 280
260 270
pF1KE6 ICQEWTNFIMKSEDYLSSISESIQ
NP_775 GTWARTLLGPDYSDENDYTHTSYNAMHVKHTSSNLERECSPKLMKRSQSVVEAGTLKHEE
290 300 310 320 330 340
>>XP_016868630 (OMIM: 611292) PREDICTED: clavesin-1 isof (354 aa)
initn: 491 init1: 399 opt: 481 Z-score: 598.0 bits: 118.8 E(85289): 1.4e-26
Smith-Waterman score: 481; 38.4% identity (69.0% similar) in 203 aa overlap (49-247:73-273)
20 30 40 50 60 70
pF1KE6 DHSPLLQPGLAALRRRAREAGVPLAPLPLTDSFLLRFLRARDFDLDLAWRLLKNYYKWRA
:.:.::::::: : :.::: .:...:
XP_016 NENPDVLHQDIQQVRDMIITRPDIGFLRTDDAFILRFLRARKFHQADAFRLLAQYFQYRQ
50 60 70 80 90 100
80 90 100 110 120 130
pF1KE6 ECPEISADLHPRSIIGLLKA---GYHGVLRSRDPTGSKVLIYRIAHWDPKVFTAYDVFRV
.. ... . :. .: :. :::..:: : :.:. :.:: . . :..:.
XP_016 LNLDMFKNFKADDP-GIKRALIDGFPGVLENRDHYGRKILLLFAANWDQSRNSFTDILRA
110 120 130 140 150 160
140 150 160 170 180 190
pF1KE6 SLITSELIVQEVETQRNGIKAIFDLEGWQFSHAFQITPSVAKKIAAVLTDSFPLKVRGIH
:.. :..... : : ::. :.: ...:..: ..:::. : : :::: . :.:
XP_016 ILLSLEVLIEDPELQINGFILIIDWSNFSFKQASKLTPSILKLAIEGLQDSFPARFGGVH
170 180 190 200 210 220
200 210 220 230 240 250
pF1KE6 LINEPVIFHAVFSMIKPFLTEKIKERIHMHGNNYKQSLLQHF-PDILPLEYGGEEFSMED
..:.: .::....::::: .: ..:: .:::: . :: : . :..:: :.::
XP_016 FVNQPWYIHALYTLIKPFLKDKTRKRIFLHGNNLN-SLHQLIHPEFLPSEFGGTLPPYDM
230 240 250 260 270 280
260 270
pF1KE6 ICQEWTNFIMKSEDYLSSISESIQ
XP_016 GTWARTLLGPDYSDENDYTHTSYNAMHVKHTSSNLERECSPKLMKRSQSVVEAGTLKHEE
290 300 310 320 330 340
>>NP_001010852 (OMIM: 616945) clavesin-2 [Homo sapiens] (327 aa)
initn: 419 init1: 349 opt: 480 Z-score: 597.3 bits: 118.6 E(85289): 1.6e-26
Smith-Waterman score: 480; 39.1% identity (67.3% similar) in 202 aa overlap (49-247:51-251)
20 30 40 50 60 70
pF1KE6 DHSPLLQPGLAALRRRAREAGVPLAPLPLTDSFLLRFLRARDFDLDLAWRLLKNYYKWRA
:.:.::::::: : :.::: .:...:
NP_001 NENPDTLHQDIQEVRDMVITRPDIGFLRTDDAFILRFLRARKFHHFEAFRLLAQYFEYRQ
30 40 50 60 70 80
80 90 100 110 120 130
pF1KE6 ECPEISADLHPRS--IIGLLKAGYHGVLRSRDPTGSKVLIYRIAHWDPKVFTAYDVFRVS
. .. ... . : :: :. : : . : : :.:. :.:: . .: :..:.
NP_001 QNLDMFKSFKATDPGIKQALKDGFPGGLANLDHYGRKILVLFAANWDQSRYTLVDILRAI
90 100 110 120 130 140
140 150 160 170 180 190
pF1KE6 LITSELIVQEVETQRNGIKAIFDLEGWQFSHAFQITPSVAKKIAAVLTDSFPLKVRGIHL
:.. : .... : : ::. :.: .. :..: ..:::. . : :::: . :::.
NP_001 LLSLEAMIEDPELQVNGFVLIIDWSNFTFKQASKLTPSMLRLAIEGLQDSFPARFGGIHF
150 160 170 180 190 200
200 210 220 230 240 250
pF1KE6 INEPVIFHAVFSMIKPFLTEKIKERIHMHGNNYKQSLLQHF-PDILPLEYGGEEFSMEDI
.:.: .::....:.::: :: ..:: .:::: . :: : . :.::: :.::
NP_001 VNQPWYIHALYTVIRPFLKEKTRKRIFLHGNNLN-SLHQLIHPEILPSEFGGMLPPYDMG
210 220 230 240 250
260 270
pF1KE6 CQEWTNFIMKSEDYLSSISESIQ
NP_001 TWARTLLDHEYDDDSEYNVDSYSMPVKEVEKELSPKSMKRSQSVVDPTVLKRMDKNEEEN
260 270 280 290 300 310
>>XP_016865755 (OMIM: 616945) PREDICTED: clavesin-2 isof (327 aa)
initn: 419 init1: 349 opt: 480 Z-score: 597.3 bits: 118.6 E(85289): 1.6e-26
Smith-Waterman score: 480; 39.1% identity (67.3% similar) in 202 aa overlap (49-247:51-251)
20 30 40 50 60 70
pF1KE6 DHSPLLQPGLAALRRRAREAGVPLAPLPLTDSFLLRFLRARDFDLDLAWRLLKNYYKWRA
:.:.::::::: : :.::: .:...:
XP_016 NENPDTLHQDIQEVRDMVITRPDIGFLRTDDAFILRFLRARKFHHFEAFRLLAQYFEYRQ
30 40 50 60 70 80
80 90 100 110 120 130
pF1KE6 ECPEISADLHPRS--IIGLLKAGYHGVLRSRDPTGSKVLIYRIAHWDPKVFTAYDVFRVS
. .. ... . : :: :. : : . : : :.:. :.:: . .: :..:.
XP_016 QNLDMFKSFKATDPGIKQALKDGFPGGLANLDHYGRKILVLFAANWDQSRYTLVDILRAI
90 100 110 120 130 140
140 150 160 170 180 190
pF1KE6 LITSELIVQEVETQRNGIKAIFDLEGWQFSHAFQITPSVAKKIAAVLTDSFPLKVRGIHL
:.. : .... : : ::. :.: .. :..: ..:::. . : :::: . :::.
XP_016 LLSLEAMIEDPELQVNGFVLIIDWSNFTFKQASKLTPSMLRLAIEGLQDSFPARFGGIHF
150 160 170 180 190 200
200 210 220 230 240 250
pF1KE6 INEPVIFHAVFSMIKPFLTEKIKERIHMHGNNYKQSLLQHF-PDILPLEYGGEEFSMEDI
.:.: .::....:.::: :: ..:: .:::: . :: : . :.::: :.::
XP_016 VNQPWYIHALYTVIRPFLKEKTRKRIFLHGNNLN-SLHQLIHPEILPSEFGGMLPPYDMG
210 220 230 240 250
260 270
pF1KE6 CQEWTNFIMKSEDYLSSISESIQ
XP_016 TWARTLLDHEYDDDSEYNVDSYSMPVKEVEKELSPKSMKRSQSVVDPTVLKRMDKNEEEN
260 270 280 290 300 310
>>XP_011520172 (OMIM: 136880,180090,607475,607476) PREDI (317 aa)
initn: 437 init1: 437 opt: 441 Z-score: 549.1 bits: 109.6 E(85289): 7.6e-24
Smith-Waterman score: 441; 32.7% identity (66.8% similar) in 226 aa overlap (24-247:66-291)
10 20 30 40 50
pF1KE6 MAEARSQPSAGPQLNALPDHSPLLQPGLAALRRRAREAGVPLAP-LPLTDS-F
:: . : ..: .: .: . :: :
XP_011 PCSQLPRHTLQKAKDELNEREETREEAVRELQEMVQAQAASGEELAVAVAERVQEKDSGF
40 50 60 70 80 90
60 70 80 90 100 110
pF1KE6 LLRFLRARDFDLDLAWRLLKNYYKWRAECPEISADLHPRSIIGLLKAGYHGVLRSRDPTG
.:::.::: :.. :..::..: ..: . ::. .: :... ..::: ::: ::: :
XP_011 FLRFIRARKFNVGRAYELLRGYVNFRLQYPELFDSLSPEAVRCTIEAGYPGVLSSRDKYG
100 110 120 130 140 150
120 130 140 150 160 170
pF1KE6 SKVLIYRIAHWDPKVFTAYDVFRVSLITSELIVQEVETQRNGIKAIFDLEGWQFSHAFQI
:... : .:. . .: ..... . : .... ::: ::. : ...:. ...: ..
XP_011 RVVMLFNIENWQSQEITFDEILQAYCFILEKLLENEETQINGFCIIENFKGFTMQQAASL
160 170 180 190 200 210
180 190 200 210 220 230
pF1KE6 TPSVAKKIAAVLTDSFPLKVRGIHLINEPVIFHAVFSMIKPFLTEKIKERIHMHGNNYKQ
: .:.. .: :::: . ..::.:..: : ......:::: :. ::. .::.. .
XP_011 RTSDLRKMVDMLQDSFPARFKAIHFIHQPWYFTTTYNVVKPFLKSKLLERVFVHGDDLSG
220 230 240 250 260 270
240 250 260 270
pF1KE6 SLLQHFPDILPLEYGGEEFSMEDICQEWTNFIMKSEDYLSSISESIQ
. .::: ..::
XP_011 FYQEIDENILPSDFGGTLPKYDGKAVAEQLFGPQAQAENTAF
280 290 300 310
>>NP_000317 (OMIM: 136880,180090,607475,607476) retinald (317 aa)
initn: 437 init1: 437 opt: 441 Z-score: 549.1 bits: 109.6 E(85289): 7.6e-24
Smith-Waterman score: 441; 32.7% identity (66.8% similar) in 226 aa overlap (24-247:66-291)
10 20 30 40 50
pF1KE6 MAEARSQPSAGPQLNALPDHSPLLQPGLAALRRRAREAGVPLAP-LPLTDS-F
:: . : ..: .: .: . :: :
NP_000 PCSQLPRHTLQKAKDELNEREETREEAVRELQEMVQAQAASGEELAVAVAERVQEKDSGF
40 50 60 70 80 90
60 70 80 90 100 110
pF1KE6 LLRFLRARDFDLDLAWRLLKNYYKWRAECPEISADLHPRSIIGLLKAGYHGVLRSRDPTG
.:::.::: :.. :..::..: ..: . ::. .: :... ..::: ::: ::: :
NP_000 FLRFIRARKFNVGRAYELLRGYVNFRLQYPELFDSLSPEAVRCTIEAGYPGVLSSRDKYG
100 110 120 130 140 150
120 130 140 150 160 170
pF1KE6 SKVLIYRIAHWDPKVFTAYDVFRVSLITSELIVQEVETQRNGIKAIFDLEGWQFSHAFQI
:... : .:. . .: ..... . : .... ::: ::. : ...:. ...: ..
NP_000 RVVMLFNIENWQSQEITFDEILQAYCFILEKLLENEETQINGFCIIENFKGFTMQQAASL
160 170 180 190 200 210
180 190 200 210 220 230
pF1KE6 TPSVAKKIAAVLTDSFPLKVRGIHLINEPVIFHAVFSMIKPFLTEKIKERIHMHGNNYKQ
: .:.. .: :::: . ..::.:..: : ......:::: :. ::. .::.. .
NP_000 RTSDLRKMVDMLQDSFPARFKAIHFIHQPWYFTTTYNVVKPFLKSKLLERVFVHGDDLSG
220 230 240 250 260 270
240 250 260 270
pF1KE6 SLLQHFPDILPLEYGGEEFSMEDICQEWTNFIMKSEDYLSSISESIQ
. .::: ..::
NP_000 FYQEIDENILPSDFGGTLPKYDGKAVAEQLFGPQAQAENTAF
280 290 300 310
>>XP_016877949 (OMIM: 136880,180090,607475,607476) PREDI (326 aa)
initn: 437 init1: 437 opt: 441 Z-score: 548.9 bits: 109.6 E(85289): 7.8e-24
Smith-Waterman score: 441; 32.7% identity (66.8% similar) in 226 aa overlap (24-247:75-300)
10 20 30 40 50
pF1KE6 MAEARSQPSAGPQLNALPDHSPLLQPGLAALRRRAREAGVPLAP-LPLTDS-F
:: . : ..: .: .: . :: :
XP_016 PCSQLPRHTLQKAKDELNEREETREEAVRELQEMVQAQAASGEELAVAVAERVQEKDSGF
50 60 70 80 90 100
60 70 80 90 100 110
pF1KE6 LLRFLRARDFDLDLAWRLLKNYYKWRAECPEISADLHPRSIIGLLKAGYHGVLRSRDPTG
.:::.::: :.. :..::..: ..: . ::. .: :... ..::: ::: ::: :
XP_016 FLRFIRARKFNVGRAYELLRGYVNFRLQYPELFDSLSPEAVRCTIEAGYPGVLSSRDKYG
110 120 130 140 150 160
120 130 140 150 160 170
pF1KE6 SKVLIYRIAHWDPKVFTAYDVFRVSLITSELIVQEVETQRNGIKAIFDLEGWQFSHAFQI
:... : .:. . .: ..... . : .... ::: ::. : ...:. ...: ..
XP_016 RVVMLFNIENWQSQEITFDEILQAYCFILEKLLENEETQINGFCIIENFKGFTMQQAASL
170 180 190 200 210 220
180 190 200 210 220 230
pF1KE6 TPSVAKKIAAVLTDSFPLKVRGIHLINEPVIFHAVFSMIKPFLTEKIKERIHMHGNNYKQ
: .:.. .: :::: . ..::.:..: : ......:::: :. ::. .::.. .
XP_016 RTSDLRKMVDMLQDSFPARFKAIHFIHQPWYFTTTYNVVKPFLKSKLLERVFVHGDDLSG
230 240 250 260 270 280
240 250 260 270
pF1KE6 SLLQHFPDILPLEYGGEEFSMEDICQEWTNFIMKSEDYLSSISESIQ
. .::: ..::
XP_016 FYQEIDENILPSDFGGTLPKYDGKAVAEQLFGPQAQAENTAF
290 300 310 320
278 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 11:35:11 2016 done: Tue Nov 8 11:35:12 2016
Total Scan time: 4.640 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]