Result of FASTA (omim) for
pFN21AE6243
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE6243, 301 aa
1>>>pF1KE6243 301 - 301 aa - 301 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.0276+/-0.000294; mu= 17.7987+/- 0.019
mean_var=68.9838+/-14.308, 0's: 0 Z-trim(118.2): 273 B-trim: 1559 in 1/53
Lambda= 0.154419
statistics sampled from 30688 (30994) to 30688 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.721), E-opt: 0.2 (0.363), width: 16
Scan time: 6.320
The best scores are: opt bits E(85289)
NP_000378 (OMIM: 212138,613698) mitochondrial carn ( 301) 2052 465.5 5.6e-131
NP_114153 (OMIM: 608157) mitochondrial ornithine t ( 301) 524 125.1 1.6e-28
NP_055067 (OMIM: 238970,603861) mitochondrial orni ( 301) 513 122.7 9e-28
NP_872362 (OMIM: 610825) solute carrier family 25 ( 288) 476 114.4 2.6e-25
NP_001070709 (OMIM: 610825) solute carrier family ( 246) 403 98.1 1.8e-20
NP_001265180 (OMIM: 610825) solute carrier family ( 246) 403 98.1 1.8e-20
NP_001265179 (OMIM: 610825) solute carrier family ( 264) 403 98.1 1.9e-20
XP_006718572 (OMIM: 610825) PREDICTED: solute carr ( 246) 399 97.2 3.4e-20
XP_016873054 (OMIM: 610825) PREDICTED: solute carr ( 246) 399 97.2 3.4e-20
XP_016873052 (OMIM: 610825) PREDICTED: solute carr ( 246) 399 97.2 3.4e-20
XP_016873053 (OMIM: 610825) PREDICTED: solute carr ( 246) 399 97.2 3.4e-20
XP_006718573 (OMIM: 610825) PREDICTED: solute carr ( 246) 399 97.2 3.4e-20
XP_016873055 (OMIM: 610825) PREDICTED: solute carr ( 246) 399 97.2 3.4e-20
XP_011543245 (OMIM: 610825) PREDICTED: solute carr ( 246) 399 97.2 3.4e-20
XP_011543246 (OMIM: 610825) PREDICTED: solute carr ( 246) 399 97.2 3.4e-20
XP_016873057 (OMIM: 610825) PREDICTED: solute carr ( 246) 399 97.2 3.4e-20
XP_016873056 (OMIM: 610825) PREDICTED: solute carr ( 246) 399 97.2 3.4e-20
XP_011543251 (OMIM: 610825) PREDICTED: solute carr ( 246) 399 97.2 3.4e-20
XP_016873058 (OMIM: 610825) PREDICTED: solute carr ( 246) 399 97.2 3.4e-20
NP_085134 (OMIM: 607571) mitochondrial 2-oxodicarb ( 299) 397 96.8 5.4e-20
NP_001164641 (OMIM: 607571) mitochondrial 2-oxodic ( 298) 389 95.1 1.9e-19
XP_011543249 (OMIM: 610825) PREDICTED: solute carr ( 246) 388 94.8 1.9e-19
NP_110407 (OMIM: 610815,616839) mitochondrial fola ( 315) 389 95.1 1.9e-19
XP_016873051 (OMIM: 610825) PREDICTED: solute carr ( 260) 388 94.8 1.9e-19
NP_005975 (OMIM: 190315,615182) tricarboxylate tra ( 311) 385 94.2 3.5e-19
XP_011535589 (OMIM: 607571) PREDICTED: mitochondri ( 303) 375 91.9 1.6e-18
NP_001287749 (OMIM: 610825) solute carrier family ( 226) 372 91.2 2.1e-18
XP_016873060 (OMIM: 610825) PREDICTED: solute carr ( 184) 368 90.2 3.3e-18
XP_016873059 (OMIM: 610825) PREDICTED: solute carr ( 184) 368 90.2 3.3e-18
XP_011535590 (OMIM: 607571) PREDICTED: mitochondri ( 269) 368 90.3 4.4e-18
NP_001243463 (OMIM: 190315,615182) tricarboxylate ( 318) 366 90.0 6.8e-18
NP_003347 (OMIM: 601665,602044) mitochondrial unco ( 312) 354 87.3 4.3e-17
NP_068605 (OMIM: 113730,601665) mitochondrial brow ( 307) 345 85.3 1.7e-16
XP_011532171 (OMIM: 205950,610819) PREDICTED: solu ( 298) 341 84.4 3.1e-16
XP_006713277 (OMIM: 205950,610819) PREDICTED: solu ( 300) 341 84.4 3.1e-16
NP_060345 (OMIM: 205950,610819) solute carrier fam ( 304) 341 84.4 3.1e-16
XP_005263263 (OMIM: 113730,601665) PREDICTED: mito ( 306) 341 84.4 3.1e-16
NP_073714 (OMIM: 601665,602044) mitochondrial unco ( 275) 328 81.4 2.1e-15
XP_011530530 (OMIM: 113730,601665) PREDICTED: mito ( 277) 327 81.2 2.5e-15
XP_011534748 (OMIM: 615064) PREDICTED: mitochondri ( 237) 326 81.0 2.6e-15
XP_016876469 (OMIM: 615064) PREDICTED: mitochondri ( 237) 326 81.0 2.6e-15
XP_016876470 (OMIM: 615064) PREDICTED: mitochondri ( 237) 326 81.0 2.6e-15
XP_016876476 (OMIM: 615064) PREDICTED: mitochondri ( 237) 326 81.0 2.6e-15
NP_001278743 (OMIM: 615064) mitochondrial basic am ( 237) 326 81.0 2.6e-15
XP_016876471 (OMIM: 615064) PREDICTED: mitochondri ( 237) 326 81.0 2.6e-15
XP_016876472 (OMIM: 615064) PREDICTED: mitochondri ( 237) 326 81.0 2.6e-15
XP_016876473 (OMIM: 615064) PREDICTED: mitochondri ( 237) 326 81.0 2.6e-15
XP_016876475 (OMIM: 615064) PREDICTED: mitochondri ( 237) 326 81.0 2.6e-15
NP_689546 (OMIM: 615064) mitochondrial basic amino ( 237) 326 81.0 2.6e-15
XP_016876474 (OMIM: 615064) PREDICTED: mitochondri ( 237) 326 81.0 2.6e-15
>>NP_000378 (OMIM: 212138,613698) mitochondrial carnitin (301 aa)
initn: 2052 init1: 2052 opt: 2052 Z-score: 2472.5 bits: 465.5 E(85289): 5.6e-131
Smith-Waterman score: 2052; 100.0% identity (100.0% similar) in 301 aa overlap (1-301:1-301)
10 20 30 40 50 60
pF1KE6 MADQPKPISPLKNLLAGGFGGVCLVFVGHPLDTVKVRLQTQPPSLPGQPPMYSGTFDCFR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 MADQPKPISPLKNLLAGGFGGVCLVFVGHPLDTVKVRLQTQPPSLPGQPPMYSGTFDCFR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 KTLFREGITGLYRGMAAPIIGVTPMFAVCFFGFGLGKKLQQKHPEDVLSYPQLFAAGMLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 KTLFREGITGLYRGMAAPIIGVTPMFAVCFFGFGLGKKLQQKHPEDVLSYPQLFAAGMLS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 GVFTTGIMTPGERIKCLLQIQASSGESKYTGTLDCAKKLYQEFGIRGIYKGTVLTLMRDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 GVFTTGIMTPGERIKCLLQIQASSGESKYTGTLDCAKKLYQEFGIRGIYKGTVLTLMRDV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 PASGMYFMTYEWLKNIFTPEGKRVSELSAPRILVAGGIAGIFNWAVAIPPDVLKSRFQTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 PASGMYFMTYEWLKNIFTPEGKRVSELSAPRILVAGGIAGIFNWAVAIPPDVLKSRFQTA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE6 PPGKYPNGFRDVLRELIRDEGVTSLYKGFNAVMIRAFPANAACFLGFEVAMKFLNWATPN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 PPGKYPNGFRDVLRELIRDEGVTSLYKGFNAVMIRAFPANAACFLGFEVAMKFLNWATPN
250 260 270 280 290 300
pF1KE6 L
:
NP_000 L
>>NP_114153 (OMIM: 608157) mitochondrial ornithine trans (301 aa)
initn: 505 init1: 237 opt: 524 Z-score: 632.8 bits: 125.1 E(85289): 1.6e-28
Smith-Waterman score: 524; 33.0% identity (65.3% similar) in 291 aa overlap (13-294:12-294)
10 20 30 40 50 60
pF1KE6 MADQPKPISPLKNLLAGGFGGVCLVFVGHPLDTVKVRLQTQPPSLPGQPPMYSGTFDCFR
.: ::. ::. :..:.:.::.::..:: : .:.: :::
NP_114 MKSGPGIQAAIDLTAGAAGGTACVLTGQPFDTIKVKMQT-------FPDLYKGLTDCFL
10 20 30 40 50
70 80 90 100 110
pF1KE6 KTLFREGITGLYRGMAAPIIGVTPMFAVCFFGFGLGKKLQQK----HPEDVLSYPQLFAA
:: . :. :.:.: . ... . .: :. .:. ... .: . :: : ::
NP_114 KTYAQVGLRGFYKGTGPALMAYVAENSVLFMCYGFCQQFVRKVAGMDKQAKLSDLQTAAA
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE6 GMLSGVFTTGIMTPGERIKCLLQ----IQASSGESKYTGTL-DCAKKLYQEFGIRGIYKG
: ....:.. . : : .:: :: .. :. .: .:. . .: . .. : :.:.:
NP_114 GSFASAFAALALCPTELVKCRLQTMYEMEMSGKIAKSHNTIWSVVKGILKKDGPLGFYHG
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE6 TVLTLMRDVPASGMYFMTYEWLKNIFTPEGKRVSELSAPRILVAGGIAGIFNWAVAIPPD
::...::. ..: :: ...:. :. .::. .....::.::: : :..: :
NP_114 LSSTLLQEVPGYFFFFGGYELSRSFFAS-GRSKDELGPVHLMLSGGVAGICLWLVVFPVD
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE6 VLKSRFQTAPPGKYPNGFRDVLRELIRDEGVTSLYKGFNAVMIRAFPANAACFLGFEVAM
.:::.:. :: .: ..:.::...::.:..:.::::.:::.: :...: .
NP_114 CIKSRIQVLSMYGKQAGFIGTLLSVVRNEGIVALYSGLKATMIRAIPANGALFVAYEYSR
240 250 260 270 280 290
300
pF1KE6 KFLNWATPNL
:..
NP_114 KMMMKQLEAY
300
>>NP_055067 (OMIM: 238970,603861) mitochondrial ornithin (301 aa)
initn: 421 init1: 229 opt: 513 Z-score: 619.6 bits: 122.7 E(85289): 9e-28
Smith-Waterman score: 513; 32.7% identity (64.0% similar) in 303 aa overlap (1-294:1-294)
10 20 30 40 50 60
pF1KE6 MADQPKPISPLKNLLAGGFGGVCLVFVGHPLDTVKVRLQTQPPSLPGQPPMYSGTFDCFR
: ..: :. .: ::. ::. :..:.:.::.::..:: : .: : ::
NP_055 MKSNPA-IQAAIDLTAGAAGGTACVLTGQPFDTMKVKMQTFPD-------LYRGLTDCCL
10 20 30 40 50
70 80 90 100 110
pF1KE6 KTLFREGITGLYRGMAAPIIGVTPMFAVCFFGFGLGKKLQQK----HPEDVLSYPQLFAA
:: . :. :.:.: . .:. .: :. .:. ... .: . :: : ::
NP_055 KTYSQVGFRGFYKGTSPALIANIAENSVLFMCYGFCQQVVRKVAGLDKQAKLSDLQNAAA
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE6 GMLSGVFTTGIMTPGERIKCLLQIQ---ASSGE-SKYTGTL-DCAKKLYQEFGIRGIYKG
: ....:.. .. : : .:: :: . .::. .: .:. . :.. .. : :.:.:
NP_055 GSFASAFAALVLCPTELVKCRLQTMYEMETSGKIAKSQNTVWSVIKSILRKDGPLGFYHG
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE6 TVLTLMRDVPASGMYFMTYEWLKNIFTPEGKRVSELSAPRILVAGGIAGIFNWAVAIPPD
::.:.::. ..: :: ...:. :. .::. ....::..:: : .. : :
NP_055 LSSTLLREVPGYFFFFGGYELSRSFFAS-GRSKDELGPVPLMLSGGVGGICLWLAVYPVD
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE6 VLKSRFQTAPPGKYPNGFRDVLRELIRDEGVTSLYKGFNAVMIRAFPANAACFLGFEVAM
.:::.:. . :: .. .....::.:.::.:.. .::::::::.: ::..: .
NP_055 CIKSRIQVLSMSGKQAGFIRTFINVVKNEGITALYSGLKPTMIRAFPANGALFLAYEYSR
240 250 260 270 280 290
300
pF1KE6 KFLNWATPNL
:..
NP_055 KLMMNQLEAY
300
>>NP_872362 (OMIM: 610825) solute carrier family 25 memb (288 aa)
initn: 502 init1: 185 opt: 476 Z-score: 575.3 bits: 114.4 E(85289): 2.6e-25
Smith-Waterman score: 555; 34.4% identity (61.9% similar) in 299 aa overlap (10-296:2-287)
10 20 30 40 50 60
pF1KE6 MADQPKPISPLKNLLAGGFGGVCLVFVGHPLDTVKVRLQTQPPSLPGQPPMYSGTFDCFR
:.....:: ..:. . .:::.:::::::::: : : ::.
NP_872 MPVEEFVAGWISGALGLVLGHPFDTVKVRLQTQTT--------YRGIVDCMV
10 20 30 40
70 80 90 100 110
pF1KE6 KTLFREGITGLYRGMAAPIIGVTPMFAVCFFGFG-----LGKKLQQKHPEDVLSYPQLFA
: .:.. :...::. :: ... . .: : .. : .:.. . :: ..:
NP_872 KIYRHESLLGFFKGMSFPIASIAVVNSVLFGVYSNTLLVLTATSHQERRAQPPSYMHIFL
50 60 70 80 90 100
120 130 140 150 160
pF1KE6 AGMLSGVFTTGIMTPGERIKCLLQ------IQASSGESKYTGTLDCAKKLYQEFGIRGIY
:: .: . . ..: . :: :: : .: .: : . :: ....: : ::..
NP_872 AGCTGGFLQAYCLAPFDLIKVRLQNQTEPRAQPGSPPPRYQGPVHCAASIFREEGPRGLF
110 120 130 140 150 160
170 180 190 200 210 220
pF1KE6 KGTVLTLMRDVPASGMYFMTYEWLKNIFTPEGKRVSELSAPRILVAGGIAGIFNWAVAIP
.:. .::.:. :.::.::: : .::::. . :. .:::::.::: .:..: :
NP_872 RGAWALTLRDTPTVGIYFITYEGLCRQYTPEGQ---NPSSATVLVAGGFAGIASWVAATP
170 180 190 200 210 220
230 240 250 260 270 280
pF1KE6 PDVLKSRFQTAP-PGKYPNGFRDVLRELIRDEGVTSLYKGFNAVMIRAFPANAACFLGFE
::.:::.: . .:. : . ::.::. ...: . ::::.::. ::..:
NP_872 LDVIKSRMQMDGLRRRVYQGMLDCMVSSIRQEGLGVFFRGVTINSARAFPVNAVTFLSYE
230 240 250 260 270 280
290 300
pF1KE6 VAMKFLNWATPNL
... :
NP_872 YLLRW--WG
>>NP_001070709 (OMIM: 610825) solute carrier family 25 m (246 aa)
initn: 435 init1: 185 opt: 403 Z-score: 488.4 bits: 98.1 E(85289): 1.8e-20
Smith-Waterman score: 436; 33.2% identity (61.5% similar) in 247 aa overlap (63-296:4-245)
40 50 60 70 80 90
pF1KE6 TVKVRLQTQPPSLPGQPPMYSGTFDCFRKTLFR-EGITGLYRGMAAPIIGVTPMFAVCFF
..: :.. :...::. :: ... . .: :
NP_001 MVKIYRHESLLGFFKGMSFPIASIAVVNSVLFG
10 20 30
100 110 120 130 140
pF1KE6 GFG-----LGKKLQQKHPEDVLSYPQLFAAGMLSGVFTTGIMTPGERIKCLLQ------I
.. : .:.. . :: ..: :: .: . . ..: . :: ::
NP_001 VYSNTLLVLTATSHQERRAQPPSYMHIFLAGCTGGFLQAYCLAPFDLIKVRLQNQTEPRA
40 50 60 70 80 90
150 160 170 180 190 200
pF1KE6 QASSGESKYTGTLDCAKKLYQEFGIRGIYKGTVLTLMRDVPASGMYFMTYEWLKNIFTPE
: .: .: : . :: ....: : ::...:. .::.:. :.::.::: : .:::
NP_001 QPGSPPPRYQGPVHCAASIFREEGPRGLFRGAWALTLRDTPTVGIYFITYEGLCRQYTPE
100 110 120 130 140 150
210 220 230 240 250
pF1KE6 GKRVSELSAPRILVAGGIAGIFNWAVAIPPDVLKSRFQTAP-PGKYPNGFRDVLRELIRD
:. : . .:::::.::: .:..: : ::.:::.: . .:. : . ::.
NP_001 GQNPSSAT---VLVAGGFAGIASWVAATPLDVIKSRMQMDGLRRRVYQGMLDCMVSSIRQ
160 170 180 190 200 210
260 270 280 290 300
pF1KE6 EGVTSLYKGFNAVMIRAFPANAACFLGFEVAMKFLNWATPNL
::. ...: . ::::.::. ::..: ... :
NP_001 EGLGVFFRGVTINSARAFPVNAVTFLSYEYLLRW--WG
220 230 240
>>NP_001265180 (OMIM: 610825) solute carrier family 25 m (246 aa)
initn: 435 init1: 185 opt: 403 Z-score: 488.4 bits: 98.1 E(85289): 1.8e-20
Smith-Waterman score: 436; 33.2% identity (61.5% similar) in 247 aa overlap (63-296:4-245)
40 50 60 70 80 90
pF1KE6 TVKVRLQTQPPSLPGQPPMYSGTFDCFRKTLFR-EGITGLYRGMAAPIIGVTPMFAVCFF
..: :.. :...::. :: ... . .: :
NP_001 MVKIYRHESLLGFFKGMSFPIASIAVVNSVLFG
10 20 30
100 110 120 130 140
pF1KE6 GFG-----LGKKLQQKHPEDVLSYPQLFAAGMLSGVFTTGIMTPGERIKCLLQ------I
.. : .:.. . :: ..: :: .: . . ..: . :: ::
NP_001 VYSNTLLVLTATSHQERRAQPPSYMHIFLAGCTGGFLQAYCLAPFDLIKVRLQNQTEPRA
40 50 60 70 80 90
150 160 170 180 190 200
pF1KE6 QASSGESKYTGTLDCAKKLYQEFGIRGIYKGTVLTLMRDVPASGMYFMTYEWLKNIFTPE
: .: .: : . :: ....: : ::...:. .::.:. :.::.::: : .:::
NP_001 QPGSPPPRYQGPVHCAASIFREEGPRGLFRGAWALTLRDTPTVGIYFITYEGLCRQYTPE
100 110 120 130 140 150
210 220 230 240 250
pF1KE6 GKRVSELSAPRILVAGGIAGIFNWAVAIPPDVLKSRFQTAP-PGKYPNGFRDVLRELIRD
:. : . .:::::.::: .:..: : ::.:::.: . .:. : . ::.
NP_001 GQNPSSAT---VLVAGGFAGIASWVAATPLDVIKSRMQMDGLRRRVYQGMLDCMVSSIRQ
160 170 180 190 200 210
260 270 280 290 300
pF1KE6 EGVTSLYKGFNAVMIRAFPANAACFLGFEVAMKFLNWATPNL
::. ...: . ::::.::. ::..: ... :
NP_001 EGLGVFFRGVTINSARAFPVNAVTFLSYEYLLRW--WG
220 230 240
>>NP_001265179 (OMIM: 610825) solute carrier family 25 m (264 aa)
initn: 487 init1: 185 opt: 403 Z-score: 487.9 bits: 98.1 E(85289): 1.9e-20
Smith-Waterman score: 435; 30.4% identity (56.9% similar) in 299 aa overlap (10-296:2-263)
10 20 30 40 50 60
pF1KE6 MADQPKPISPLKNLLAGGFGGVCLVFVGHPLDTVKVRLQTQPPSLPGQPPMYSGTFDCFR
:.....:: ..:. . .:::.::::
NP_001 MPVEEFVAGWISGALGLVLGHPFDTVK-------------------------
10 20
70 80 90 100 110
pF1KE6 KTLFREGITGLYRGMAAPIIGVTPMFAVCFFGFG-----LGKKLQQKHPEDVLSYPQLFA
. :...::. :: ... . .: : .. : .:.. . :: ..:
NP_001 -------LLGFFKGMSFPIASIAVVNSVLFGVYSNTLLVLTATSHQERRAQPPSYMHIFL
30 40 50 60 70 80
120 130 140 150 160
pF1KE6 AGMLSGVFTTGIMTPGERIKCLLQ------IQASSGESKYTGTLDCAKKLYQEFGIRGIY
:: .: . . ..: . :: :: : .: .: : . :: ....: : ::..
NP_001 AGCTGGFLQAYCLAPFDLIKVRLQNQTEPRAQPGSPPPRYQGPVHCAASIFREEGPRGLF
90 100 110 120 130 140
170 180 190 200 210 220
pF1KE6 KGTVLTLMRDVPASGMYFMTYEWLKNIFTPEGKRVSELSAPRILVAGGIAGIFNWAVAIP
.:. .::.:. :.::.::: : .::::. . :. .:::::.::: .:..: :
NP_001 RGAWALTLRDTPTVGIYFITYEGLCRQYTPEGQ---NPSSATVLVAGGFAGIASWVAATP
150 160 170 180 190
230 240 250 260 270 280
pF1KE6 PDVLKSRFQTAP-PGKYPNGFRDVLRELIRDEGVTSLYKGFNAVMIRAFPANAACFLGFE
::.:::.: . .:. : . ::.::. ...: . ::::.::. ::..:
NP_001 LDVIKSRMQMDGLRRRVYQGMLDCMVSSIRQEGLGVFFRGVTINSARAFPVNAVTFLSYE
200 210 220 230 240 250
290 300
pF1KE6 VAMKFLNWATPNL
... :
NP_001 YLLRW--WG
260
>>XP_006718572 (OMIM: 610825) PREDICTED: solute carrier (246 aa)
initn: 431 init1: 185 opt: 399 Z-score: 483.5 bits: 97.2 E(85289): 3.4e-20
Smith-Waterman score: 432; 32.8% identity (61.5% similar) in 247 aa overlap (63-296:4-245)
40 50 60 70 80 90
pF1KE6 TVKVRLQTQPPSLPGQPPMYSGTFDCFRKTLFR-EGITGLYRGMAAPIIGVTPMFAVCFF
..: :.. :...::. :: ... . .: :
XP_006 MVKIYRHESLLGFFKGMSFPIASIAVVNSVLFG
10 20 30
100 110 120 130 140
pF1KE6 GFG-----LGKKLQQKHPEDVLSYPQLFAAGMLSGVFTTGIMTPGERIKCLLQ------I
.. : .:.. . :: ..: :: .: . . ..: . :: ::
XP_006 VYSNTLLVLTATSHQERRAQPPSYMHIFLAGCTGGFLQAYCLAPFDLIKVRLQNQTEPRA
40 50 60 70 80 90
150 160 170 180 190 200
pF1KE6 QASSGESKYTGTLDCAKKLYQEFGIRGIYKGTVLTLMRDVPASGMYFMTYEWLKNIFTPE
: .: .: : . :: ....: : ::...:. .::.:. :.::.::: : .:::
XP_006 QPGSPPPRYQGPVHCAASIFREEGPRGLFRGAWALTLRDTPTVGIYFITYEGLCRQYTPE
100 110 120 130 140 150
210 220 230 240 250
pF1KE6 GKRVSELSAPRILVAGGIAGIFNWAVAIPPDVLKSRFQTAP-PGKYPNGFRDVLRELIRD
:. : . .:::::.::: .:..: : :..:::.: . .:. : . ::.
XP_006 GQNPSSAT---VLVAGGFAGIASWVAATPLDMIKSRMQMDGLRRRVYQGMLDCMVSSIRQ
160 170 180 190 200 210
260 270 280 290 300
pF1KE6 EGVTSLYKGFNAVMIRAFPANAACFLGFEVAMKFLNWATPNL
::. ...: . ::::.::. ::..: ... :
XP_006 EGLGVFFRGVTINSARAFPVNAVTFLSYEYLLRW--WG
220 230 240
>>XP_016873054 (OMIM: 610825) PREDICTED: solute carrier (246 aa)
initn: 431 init1: 185 opt: 399 Z-score: 483.5 bits: 97.2 E(85289): 3.4e-20
Smith-Waterman score: 432; 32.8% identity (61.5% similar) in 247 aa overlap (63-296:4-245)
40 50 60 70 80 90
pF1KE6 TVKVRLQTQPPSLPGQPPMYSGTFDCFRKTLFR-EGITGLYRGMAAPIIGVTPMFAVCFF
..: :.. :...::. :: ... . .: :
XP_016 MVKIYRHESLLGFFKGMSFPIASIAVVNSVLFG
10 20 30
100 110 120 130 140
pF1KE6 GFG-----LGKKLQQKHPEDVLSYPQLFAAGMLSGVFTTGIMTPGERIKCLLQ------I
.. : .:.. . :: ..: :: .: . . ..: . :: ::
XP_016 VYSNTLLVLTATSHQERRAQPPSYMHIFLAGCTGGFLQAYCLAPFDLIKVRLQNQTEPRA
40 50 60 70 80 90
150 160 170 180 190 200
pF1KE6 QASSGESKYTGTLDCAKKLYQEFGIRGIYKGTVLTLMRDVPASGMYFMTYEWLKNIFTPE
: .: .: : . :: ....: : ::...:. .::.:. :.::.::: : .:::
XP_016 QPGSPPPRYQGPVHCAASIFREEGPRGLFRGAWALTLRDTPTVGIYFITYEGLCRQYTPE
100 110 120 130 140 150
210 220 230 240 250
pF1KE6 GKRVSELSAPRILVAGGIAGIFNWAVAIPPDVLKSRFQTAP-PGKYPNGFRDVLRELIRD
:. : . .:::::.::: .:..: : :..:::.: . .:. : . ::.
XP_016 GQNPSSAT---VLVAGGFAGIASWVAATPLDMIKSRMQMDGLRRRVYQGMLDCMVSSIRQ
160 170 180 190 200 210
260 270 280 290 300
pF1KE6 EGVTSLYKGFNAVMIRAFPANAACFLGFEVAMKFLNWATPNL
::. ...: . ::::.::. ::..: ... :
XP_016 EGLGVFFRGVTINSARAFPVNAVTFLSYEYLLRW--WG
220 230 240
>>XP_016873052 (OMIM: 610825) PREDICTED: solute carrier (246 aa)
initn: 431 init1: 185 opt: 399 Z-score: 483.5 bits: 97.2 E(85289): 3.4e-20
Smith-Waterman score: 432; 32.8% identity (61.5% similar) in 247 aa overlap (63-296:4-245)
40 50 60 70 80 90
pF1KE6 TVKVRLQTQPPSLPGQPPMYSGTFDCFRKTLFR-EGITGLYRGMAAPIIGVTPMFAVCFF
..: :.. :...::. :: ... . .: :
XP_016 MVKIYRHESLLGFFKGMSFPIASIAVVNSVLFG
10 20 30
100 110 120 130 140
pF1KE6 GFG-----LGKKLQQKHPEDVLSYPQLFAAGMLSGVFTTGIMTPGERIKCLLQ------I
.. : .:.. . :: ..: :: .: . . ..: . :: ::
XP_016 VYSNTLLVLTATSHQERRAQPPSYMHIFLAGCTGGFLQAYCLAPFDLIKVRLQNQTEPRA
40 50 60 70 80 90
150 160 170 180 190 200
pF1KE6 QASSGESKYTGTLDCAKKLYQEFGIRGIYKGTVLTLMRDVPASGMYFMTYEWLKNIFTPE
: .: .: : . :: ....: : ::...:. .::.:. :.::.::: : .:::
XP_016 QPGSPPPRYQGPVHCAASIFREEGPRGLFRGAWALTLRDTPTVGIYFITYEGLCRQYTPE
100 110 120 130 140 150
210 220 230 240 250
pF1KE6 GKRVSELSAPRILVAGGIAGIFNWAVAIPPDVLKSRFQTAP-PGKYPNGFRDVLRELIRD
:. : . .:::::.::: .:..: : :..:::.: . .:. : . ::.
XP_016 GQNPSSAT---VLVAGGFAGIASWVAATPLDMIKSRMQMDGLRRRVYQGMLDCMVSSIRQ
160 170 180 190 200 210
260 270 280 290 300
pF1KE6 EGVTSLYKGFNAVMIRAFPANAACFLGFEVAMKFLNWATPNL
::. ...: . ::::.::. ::..: ... :
XP_016 EGLGVFFRGVTINSARAFPVNAVTFLSYEYLLRW--WG
220 230 240
301 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 11:24:07 2016 done: Tue Nov 8 11:24:08 2016
Total Scan time: 6.320 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]