Result of FASTA (ccds) for
pFN21AE6225
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE6225, 222 aa
1>>>pF1KE6225 222 - 222 aa - 222 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.4933+/-0.000678; mu= 12.7734+/- 0.041
mean_var=58.8259+/-11.676, 0's: 0 Z-trim(109.0): 22 B-trim: 9 in 1/49
Lambda= 0.167221
statistics sampled from 10575 (10596) to 10575 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.707), E-opt: 0.2 (0.325), width: 16
Scan time: 1.550
The best scores are: opt bits E(32554)
CCDS4947.1 GSTA3 gene_id:2940|Hs108|chr6 ( 222) 1432 353.3 7.3e-98
CCDS4945.1 GSTA1 gene_id:2938|Hs108|chr6 ( 222) 1292 319.5 1.1e-87
CCDS4944.1 GSTA2 gene_id:2939|Hs108|chr6 ( 222) 1263 312.5 1.4e-85
CCDS4946.1 GSTA5 gene_id:221357|Hs108|chr6 ( 222) 1217 301.4 3e-82
CCDS4948.1 GSTA4 gene_id:2941|Hs108|chr6 ( 222) 835 209.2 1.6e-54
CCDS41679.1 GSTP1 gene_id:2950|Hs108|chr11 ( 210) 295 79.0 2.6e-15
CCDS3640.1 HPGDS gene_id:27306|Hs108|chr4 ( 199) 244 66.7 1.2e-11
>>CCDS4947.1 GSTA3 gene_id:2940|Hs108|chr6 (222 aa)
initn: 1432 init1: 1432 opt: 1432 Z-score: 1870.5 bits: 353.3 E(32554): 7.3e-98
Smith-Waterman score: 1432; 99.5% identity (100.0% similar) in 222 aa overlap (1-222:1-222)
10 20 30 40 50 60
pF1KE6 MAGKPKLHYFNGRGRMEPIRWLLAAAGVEFEEKFIGSAEDLGKLRNDGSLMFQQVPMVEI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 MAGKPKLHYFNGRGRMEPIRWLLAAAGVEFEEKFIGSAEDLGKLRNDGSLMFQQVPMVEI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 DGIKLVQTRAILNYIASKYNLYGKDIKERALIDMYTEGMADLNEMILLLPLCRPEEKDAK
::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 DGMKLVQTRAILNYIASKYNLYGKDIKERALIDMYTEGMADLNEMILLLPLCRPEEKDAK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 IALIKEKTKSRYFPAFEKVLQSHGQDYLVGNKLSRADISLVELLYYVEELDSSLISNFPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 IALIKEKTKSRYFPAFEKVLQSHGQDYLVGNKLSRADISLVELLYYVEELDSSLISNFPL
130 140 150 160 170 180
190 200 210 220
pF1KE6 LKALKTRISNLPTVKKFLQPGSPRKPPADAKALEEARKIFRF
::::::::::::::::::::::::::::::::::::::::::
CCDS49 LKALKTRISNLPTVKKFLQPGSPRKPPADAKALEEARKIFRF
190 200 210 220
>>CCDS4945.1 GSTA1 gene_id:2938|Hs108|chr6 (222 aa)
initn: 1292 init1: 1292 opt: 1292 Z-score: 1687.9 bits: 319.5 E(32554): 1.1e-87
Smith-Waterman score: 1292; 90.1% identity (94.6% similar) in 222 aa overlap (1-222:1-222)
10 20 30 40 50 60
pF1KE6 MAGKPKLHYFNGRGRMEPIRWLLAAAGVEFEEKFIGSAEDLGKLRNDGSLMFQQVPMVEI
:: ::::::::.::::: :::::::::::::::: ::::: :::::: :::::::::::
CCDS49 MAEKPKLHYFNARGRMESTRWLLAAAGVEFEEKFIKSAEDLDKLRNDGYLMFQQVPMVEI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 DGIKLVQTRAILNYIASKYNLYGKDIKERALIDMYTEGMADLNEMILLLPLCRPEEKDAK
::.:::::::::::::::::::::::::::::::: ::.:::.:::::::.: :::::::
CCDS49 DGMKLVQTRAILNYIASKYNLYGKDIKERALIDMYIEGIADLGEMILLLPVCPPEEKDAK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 IALIKEKTKSRYFPAFEKVLQSHGQDYLVGNKLSRADISLVELLYYVEELDSSLISNFPL
.:::::: :.::::::::::.::::::::::::::::: :::::::::::::::::.:::
CCDS49 LALIKEKIKNRYFPAFEKVLKSHGQDYLVGNKLSRADIHLVELLYYVEELDSSLISSFPL
130 140 150 160 170 180
190 200 210 220
pF1KE6 LKALKTRISNLPTVKKFLQPGSPRKPPADAKALEEARKIFRF
::::::::::::::::::::::::::: : :.::::::::::
CCDS49 LKALKTRISNLPTVKKFLQPGSPRKPPMDEKSLEEARKIFRF
190 200 210 220
>>CCDS4944.1 GSTA2 gene_id:2939|Hs108|chr6 (222 aa)
initn: 1263 init1: 1263 opt: 1263 Z-score: 1650.1 bits: 312.5 E(32554): 1.4e-85
Smith-Waterman score: 1263; 88.3% identity (94.6% similar) in 222 aa overlap (1-222:1-222)
10 20 30 40 50 60
pF1KE6 MAGKPKLHYFNGRGRMEPIRWLLAAAGVEFEEKFIGSAEDLGKLRNDGSLMFQQVPMVEI
:: :::::: : ::::: ::::::::::::::::: ::::: :::::: :::::::::::
CCDS49 MAEKPKLHYSNIRGRMESIRWLLAAAGVEFEEKFIKSAEDLDKLRNDGYLMFQQVPMVEI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 DGIKLVQTRAILNYIASKYNLYGKDIKERALIDMYTEGMADLNEMILLLPLCRPEEKDAK
::.:::::::::::::::::::::::::.:::::: ::.:::.:::::::. .:::.:::
CCDS49 DGMKLVQTRAILNYIASKYNLYGKDIKEKALIDMYIEGIADLGEMILLLPFSQPEEQDAK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 IALIKEKTKSRYFPAFEKVLQSHGQDYLVGNKLSRADISLVELLYYVEELDSSLISNFPL
.:::.::::.::::::::::.::::::::::::::::: :::::::::::::::::.:::
CCDS49 LALIQEKTKNRYFPAFEKVLKSHGQDYLVGNKLSRADIHLVELLYYVEELDSSLISSFPL
130 140 150 160 170 180
190 200 210 220
pF1KE6 LKALKTRISNLPTVKKFLQPGSPRKPPADAKALEEARKIFRF
::::::::::::::::::::::::::: : :.:::.::::::
CCDS49 LKALKTRISNLPTVKKFLQPGSPRKPPMDEKSLEESRKIFRF
190 200 210 220
>>CCDS4946.1 GSTA5 gene_id:221357|Hs108|chr6 (222 aa)
initn: 1217 init1: 1217 opt: 1217 Z-score: 1590.1 bits: 301.4 E(32554): 3e-82
Smith-Waterman score: 1217; 85.1% identity (93.2% similar) in 222 aa overlap (1-222:1-222)
10 20 30 40 50 60
pF1KE6 MAGKPKLHYFNGRGRMEPIRWLLAAAGVEFEEKFIGSAEDLGKLRNDGSLMFQQVPMVEI
:: :::::: :.:: :: :::::::::::.::::. ::::: ::::::::.:::::::::
CCDS49 MAEKPKLHYSNARGSMESIRWLLAAAGVELEEKFLESAEDLDKLRNDGSLLFQQVPMVEI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 DGIKLVQTRAILNYIASKYNLYGKDIKERALIDMYTEGMADLNEMILLLPLCRPEEKDAK
::.::::::::::::::::::::::.::::::::::::..::.:::::: .:.:::.:::
CCDS49 DGMKLVQTRAILNYIASKYNLYGKDMKERALIDMYTEGIVDLTEMILLLLICQPEERDAK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 IALIKEKTKSRYFPAFEKVLQSHGQDYLVGNKLSRADISLVELLYYVEELDSSLISNFPL
::.::: :.::::::::::.:: :::::::::: ::: ::::.::::::::::::.:::
CCDS49 TALVKEKIKNRYFPAFEKVLKSHRQDYLVGNKLSWADIHLVELFYYVEELDSSLISSFPL
130 140 150 160 170 180
190 200 210 220
pF1KE6 LKALKTRISNLPTVKKFLQPGSPRKPPADAKALEEARKIFRF
:::::::::::::::::::::: :::: : :.::::::::::
CCDS49 LKALKTRISNLPTVKKFLQPGSQRKPPMDEKSLEEARKIFRF
190 200 210 220
>>CCDS4948.1 GSTA4 gene_id:2941|Hs108|chr6 (222 aa)
initn: 835 init1: 835 opt: 835 Z-score: 1092.1 bits: 209.2 E(32554): 1.6e-54
Smith-Waterman score: 835; 52.9% identity (83.7% similar) in 221 aa overlap (1-221:1-221)
10 20 30 40 50 60
pF1KE6 MAGKPKLHYFNGRGRMEPIRWLLAAAGVEFEEKFIGSAEDLGKLRNDGSLMFQQVPMVEI
::..::::: ::::::: .::.::::::::.:.:. . :.: ::.. . :.:::::::::
CCDS49 MAARPKLHYPNGRGRMESVRWVLAAAGVEFDEEFLETKEQLYKLQDGNHLLFQQVPMVEI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 DGIKLVQTRAILNYIASKYNLYGKDIKERALIDMYTEGMADLNEMILLLPLCRPEEKDAK
::.::::::.::.:::.:.::.::..:::.:::::.:: :: :.... :. .:.... .
CCDS49 DGMKLVQTRSILHYIADKHNLFGKNLKERTLIDMYVEGTLDLLELLIMHPFLKPDDQQKE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 IALIKEKTKSRYFPAFEKVLQSHGQDYLVGNKLSRADISLVELLYYVEELDSSLISNFPL
.. . .:. ::::.:::.:..:::..::::.:: ::. :.. . .:: ...: ::.
CCDS49 VVNMAQKAIIRYFPVFEKILRGHGQSFLVGNQLSLADVILLQTILALEEKIPNILSAFPF
130 140 150 160 170 180
190 200 210 220
pF1KE6 LKALKTRISNLPTVKKFLQPGSPRKPPADAKALEEARKIFRF
:. ...::.::.:.::.::: .::: : .. . .:::
CCDS49 LQEYTVKLSNIPTIKRFLEPGSKKKPPPDEIYVRTVYNIFRP
190 200 210 220
>>CCDS41679.1 GSTP1 gene_id:2950|Hs108|chr11 (210 aa)
initn: 278 init1: 130 opt: 295 Z-score: 388.4 bits: 79.0 E(32554): 2.6e-15
Smith-Waterman score: 295; 32.8% identity (58.6% similar) in 198 aa overlap (9-203:8-197)
10 20 30 40 50 60
pF1KE6 MAGKPKLHYFNGRGRMEPIRWLLAAAGVEFEEKFIGSAEDLGKLRNDGSLMFQQVPMVEI
:: ::: .: ::: : ..:. . ..: . .: .. :.: .
CCDS41 MPPYTVVYFPVRGRCAALRMLLADQGQSWKEEVV-TVETWQEGSLKASCLYGQLPKFQD
10 20 30 40 50
70 80 90 100 110
pF1KE6 DGIKLVQTRAILNYIASKYNLYGKDIKERALIDMYTEGMADLN-EMILLLPLCRPEEKDA
. : :. .:: ... .::::: .: ::.:: ..:. :: ..: :. ::
CCDS41 GDLTLYQSNTILRHLGRTLGLYGKDQQEAALVDMVNDGVEDLRCKYISLIYTNYEAGKDD
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE6 KIALIKEKTKSRYFPAFEKVLQSH--GQDYLVGNKLSRADISLVELLYYVEELDSSLISN
. . . : : :: .:... :. ..::...: :: .:..:: : : . ..
CCDS41 YVKALPGQLK----P-FETLLSQNQGGKTFIVGDQISFADYNLLDLLLIHEVLAPGCLDA
120 130 140 150 160 170
180 190 200 210 220
pF1KE6 FPLLKALKTRISNLPTVKKFLQPGSPRKPPADAKALEEARKIFRF
::::.: :.: : .: :: .::
CCDS41 FPLLSAYVGRLSARPKLKAFL--ASPEYVNLPINGNGKQ
180 190 200 210
>>CCDS3640.1 HPGDS gene_id:27306|Hs108|chr4 (199 aa)
initn: 149 init1: 75 opt: 244 Z-score: 322.3 bits: 66.7 E(32554): 1.2e-11
Smith-Waterman score: 246; 27.1% identity (62.3% similar) in 207 aa overlap (6-206:5-195)
10 20 30 40 50 60
pF1KE6 MAGKPKLHYFNGRGRMEPIRWLLAAAGVEFEEKFIGSAEDLGKLRNDGSLMFQQVPMVEI
:: ::: ::: : ::...: ...:.. : .: : .... .: : ..:..:.
CCDS36 MPNYKLTYFNMRGRAEIIRYIFAYLDIQYEDHRIEQA-DWPEIKS--TLPFGKIPILEV
10 20 30 40 50
70 80 90 100 110 120
pF1KE6 DGIKLVQTRAILNYIASKYNLYGKDIKERALIDMYTEGMADLNEMILLLPLCRPEEKDAK
::. : :. :: :.... .: :. :. .: .. . :. . .: . ...:.:
CCDS36 DGLTLHQSLAIARYLTKNTDLAGNTEMEQCHVDAIVDTLDDF---MSCFPWAE-KKQDVK
60 70 80 90 100 110
130 140 150 160 170
pF1KE6 IALIKEKTKSRYFPAFEKVLQSH--GQDYLVGNKLSRAD----ISLVELLYYVEELDSSL
...: . : . . :... :...:.::... :: : . :: . . :
CCDS36 EQMFNELL-TYNAPHLMQDLDTYLGGREWLIGNSVTWADFYWEICSTTLLVFKPD----L
120 130 140 150 160
180 190 200 210 220
pF1KE6 ISNFPLLKALKTRISNLPTVKKFLQPGSPRKPPADAKALEEARKIFRF
..: : : .:. ... .:.: .... :.:
CCDS36 LDNHPRLVTLRKKVQAIPAVANWIK----RRPQTKL
170 180 190
222 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 11:14:49 2016 done: Tue Nov 8 11:14:49 2016
Total Scan time: 1.550 Total Display time: -0.020
Function used was FASTA [36.3.4 Apr, 2011]