FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6205, 179 aa 1>>>pF1KE6205 179 - 179 aa - 179 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.2835+/-0.000932; mu= 12.0901+/- 0.056 mean_var=53.7785+/-10.895, 0's: 0 Z-trim(103.1): 27 B-trim: 0 in 0/52 Lambda= 0.174892 statistics sampled from 7246 (7255) to 7246 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.602), E-opt: 0.2 (0.223), width: 16 Scan time: 1.490 The best scores are: opt bits E(32554) CCDS45340.1 SEC11A gene_id:23478|Hs108|chr15 ( 179) 1182 306.2 6.8e-84 CCDS61742.1 SEC11A gene_id:23478|Hs108|chr15 ( 153) 1009 262.6 8.1e-71 CCDS11970.1 SEC11C gene_id:90701|Hs108|chr18 ( 192) 985 256.5 6.6e-69 CCDS61744.1 SEC11A gene_id:23478|Hs108|chr15 ( 164) 961 250.5 3.8e-67 CCDS61743.1 SEC11A gene_id:23478|Hs108|chr15 ( 185) 953 248.5 1.7e-66 CCDS77193.1 SEC11C gene_id:90701|Hs108|chr18 ( 161) 814 213.4 5.5e-56 CCDS73776.1 SEC11A gene_id:23478|Hs108|chr15 ( 129) 523 139.9 5.7e-34 >>CCDS45340.1 SEC11A gene_id:23478|Hs108|chr15 (179 aa) initn: 1182 init1: 1182 opt: 1182 Z-score: 1619.7 bits: 306.2 E(32554): 6.8e-84 Smith-Waterman score: 1182; 100.0% identity (100.0% similar) in 179 aa overlap (1-179:1-179) 10 20 30 40 50 60 pF1KE6 MLSLDFLDDVRRMNKRQLYYQVLNFGMIVSSALMIWKGLMVITGSESPIVVVLSGSMEPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 MLSLDFLDDVRRMNKRQLYYQVLNFGMIVSSALMIWKGLMVITGSESPIVVVLSGSMEPA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 FHRGDLLFLTNRVEDPIRVGEIVVFRIEGREIPIVHRVLKIHEKQNGHIKFLTKGDNNAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 FHRGDLLFLTNRVEDPIRVGEIVVFRIEGREIPIVHRVLKIHEKQNGHIKFLTKGDNNAV 70 80 90 100 110 120 130 140 150 160 170 pF1KE6 DDRGLYKQGQHWLEKKDVVGRARGFVPYIGIVTILMNDYPKFKYAVLFLLGLFVLVHRE ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 DDRGLYKQGQHWLEKKDVVGRARGFVPYIGIVTILMNDYPKFKYAVLFLLGLFVLVHRE 130 140 150 160 170 >>CCDS61742.1 SEC11A gene_id:23478|Hs108|chr15 (153 aa) initn: 1009 init1: 1009 opt: 1009 Z-score: 1384.9 bits: 262.6 E(32554): 8.1e-71 Smith-Waterman score: 1009; 100.0% identity (100.0% similar) in 153 aa overlap (27-179:1-153) 10 20 30 40 50 60 pF1KE6 MLSLDFLDDVRRMNKRQLYYQVLNFGMIVSSALMIWKGLMVITGSESPIVVVLSGSMEPA :::::::::::::::::::::::::::::::::: CCDS61 MIVSSALMIWKGLMVITGSESPIVVVLSGSMEPA 10 20 30 70 80 90 100 110 120 pF1KE6 FHRGDLLFLTNRVEDPIRVGEIVVFRIEGREIPIVHRVLKIHEKQNGHIKFLTKGDNNAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS61 FHRGDLLFLTNRVEDPIRVGEIVVFRIEGREIPIVHRVLKIHEKQNGHIKFLTKGDNNAV 40 50 60 70 80 90 130 140 150 160 170 pF1KE6 DDRGLYKQGQHWLEKKDVVGRARGFVPYIGIVTILMNDYPKFKYAVLFLLGLFVLVHRE ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS61 DDRGLYKQGQHWLEKKDVVGRARGFVPYIGIVTILMNDYPKFKYAVLFLLGLFVLVHRE 100 110 120 130 140 150 >>CCDS11970.1 SEC11C gene_id:90701|Hs108|chr18 (192 aa) initn: 985 init1: 985 opt: 985 Z-score: 1350.5 bits: 256.5 E(32554): 6.6e-69 Smith-Waterman score: 985; 80.7% identity (96.0% similar) in 176 aa overlap (4-179:16-191) 10 20 30 40 pF1KE6 MLSLDFLDDVRRMNKRQLYYQVLNFGMIVSSALMIWKGLMVITGSESP ::.. :...:::::::::::::.:::::::::::::.:.:::::: CCDS11 MVRAGAVGAHLPASGLDIFGDLKKMNKRQLYYQVLNFAMIVSSALMIWKGLIVLTGSESP 10 20 30 40 50 60 50 60 70 80 90 100 pF1KE6 IVVVLSGSMEPAFHRGDLLFLTNRVEDPIRVGEIVVFRIEGREIPIVHRVLKIHEKQNGH ::::::::::::::::::::::: :::::.::::::..:::.:::::::.:.:::.:: CCDS11 IVVVLSGSMEPAFHRGDLLFLTNFREDPIRAGEIVVFKVEGRDIPIVHRVIKVHEKDNGD 70 80 90 100 110 120 110 120 130 140 150 160 pF1KE6 IKFLTKGDNNAVDDRGLYKQGQHWLEKKDVVGRARGFVPYIGIVTILMNDYPKFKYAVLF :::::::::: ::::::::.::.::::::::::::::.::.:.:::.::::::::::.: CCDS11 IKFLTKGDNNEVDDRGLYKEGQNWLEKKDVVGRARGFLPYVGMVTIIMNDYPKFKYALLA 130 140 150 160 170 180 170 pF1KE6 LLGLFVLVHRE ..: .::..:: CCDS11 VMGAYVLLKRES 190 >>CCDS61744.1 SEC11A gene_id:23478|Hs108|chr15 (164 aa) initn: 961 init1: 961 opt: 961 Z-score: 1318.9 bits: 250.5 E(32554): 3.8e-67 Smith-Waterman score: 961; 100.0% identity (100.0% similar) in 145 aa overlap (1-145:1-145) 10 20 30 40 50 60 pF1KE6 MLSLDFLDDVRRMNKRQLYYQVLNFGMIVSSALMIWKGLMVITGSESPIVVVLSGSMEPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS61 MLSLDFLDDVRRMNKRQLYYQVLNFGMIVSSALMIWKGLMVITGSESPIVVVLSGSMEPA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 FHRGDLLFLTNRVEDPIRVGEIVVFRIEGREIPIVHRVLKIHEKQNGHIKFLTKGDNNAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS61 FHRGDLLFLTNRVEDPIRVGEIVVFRIEGREIPIVHRVLKIHEKQNGHIKFLTKGDNNAV 70 80 90 100 110 120 130 140 150 160 170 pF1KE6 DDRGLYKQGQHWLEKKDVVGRARGFVPYIGIVTILMNDYPKFKYAVLFLLGLFVLVHRE ::::::::::::::::::::::::: CCDS61 DDRGLYKQGQHWLEKKDVVGRARGFYQENSSVEDRNYLFLILEL 130 140 150 160 >>CCDS61743.1 SEC11A gene_id:23478|Hs108|chr15 (185 aa) initn: 953 init1: 953 opt: 953 Z-score: 1307.1 bits: 248.5 E(32554): 1.7e-66 Smith-Waterman score: 953; 100.0% identity (100.0% similar) in 144 aa overlap (1-144:1-144) 10 20 30 40 50 60 pF1KE6 MLSLDFLDDVRRMNKRQLYYQVLNFGMIVSSALMIWKGLMVITGSESPIVVVLSGSMEPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS61 MLSLDFLDDVRRMNKRQLYYQVLNFGMIVSSALMIWKGLMVITGSESPIVVVLSGSMEPA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 FHRGDLLFLTNRVEDPIRVGEIVVFRIEGREIPIVHRVLKIHEKQNGHIKFLTKGDNNAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS61 FHRGDLLFLTNRVEDPIRVGEIVVFRIEGREIPIVHRVLKIHEKQNGHIKFLTKGDNNAV 70 80 90 100 110 120 130 140 150 160 170 pF1KE6 DDRGLYKQGQHWLEKKDVVGRARGFVPYIGIVTILMNDYPKFKYAVLFLLGLFVLVHRE :::::::::::::::::::::::: CCDS61 DDRGLYKQGQHWLEKKDVVGRARGMQFSFCWVYSCWFIVSKKPALLFLGRCHSFRYWMFG 130 140 150 160 170 180 >>CCDS77193.1 SEC11C gene_id:90701|Hs108|chr18 (161 aa) initn: 836 init1: 814 opt: 814 Z-score: 1118.6 bits: 213.4 E(32554): 5.5e-56 Smith-Waterman score: 814; 83.2% identity (96.5% similar) in 143 aa overlap (4-146:16-158) 10 20 30 40 pF1KE6 MLSLDFLDDVRRMNKRQLYYQVLNFGMIVSSALMIWKGLMVITGSESP ::.. :...:::::::::::::.:::::::::::::.:.:::::: CCDS77 MVRAGAVGAHLPASGLDIFGDLKKMNKRQLYYQVLNFAMIVSSALMIWKGLIVLTGSESP 10 20 30 40 50 60 50 60 70 80 90 100 pF1KE6 IVVVLSGSMEPAFHRGDLLFLTNRVEDPIRVGEIVVFRIEGREIPIVHRVLKIHEKQNGH ::::::::::::::::::::::: :::::.::::::..:::.:::::::.:.:::.:: CCDS77 IVVVLSGSMEPAFHRGDLLFLTNFREDPIRAGEIVVFKVEGRDIPIVHRVIKVHEKDNGD 70 80 90 100 110 120 110 120 130 140 150 160 pF1KE6 IKFLTKGDNNAVDDRGLYKQGQHWLEKKDVVGRARGFVPYIGIVTILMNDYPKFKYAVLF :::::::::: ::::::::.::.:::::::::::::.. CCDS77 IKFLTKGDNNEVDDRGLYKEGQNWLEKKDVVGRARGMLFWL 130 140 150 160 170 pF1KE6 LLGLFVLVHRE >>CCDS73776.1 SEC11A gene_id:23478|Hs108|chr15 (129 aa) initn: 835 init1: 512 opt: 523 Z-score: 723.4 bits: 139.9 E(32554): 5.7e-34 Smith-Waterman score: 739; 71.5% identity (72.1% similar) in 179 aa overlap (1-179:1-129) 10 20 30 40 50 60 pF1KE6 MLSLDFLDDVRRMNKRQLYYQVLNFGMIVSSALMIWKGLMVITGSESPIVVVLSGSMEPA ::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 MLSLDFLDDVRRMNKRQLYYQVLNFGMIVSSALMIWKGLMVITGSESPIVVVL------- 10 20 30 40 50 70 80 90 100 110 120 pF1KE6 FHRGDLLFLTNRVEDPIRVGEIVVFRIEGREIPIVHRVLKIHEKQNGHIKFLTKGDNNAV .:::::::::::::::: CCDS73 -------------------------------------------RQNGHIKFLTKGDNNAV 60 70 130 140 150 160 170 pF1KE6 DDRGLYKQGQHWLEKKDVVGRARGFVPYIGIVTILMNDYPKFKYAVLFLLGLFVLVHRE ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 DDRGLYKQGQHWLEKKDVVGRARGFVPYIGIVTILMNDYPKFKYAVLFLLGLFVLVHRE 80 90 100 110 120 179 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 11:04:13 2016 done: Tue Nov 8 11:04:13 2016 Total Scan time: 1.490 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]