FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE6178, 118 aa
  1>>>pF1KE6178 118 - 118 aa - 118 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 7.5131+/-0.000876; mu= 1.7466+/- 0.053
 mean_var=159.1704+/-31.257, 0's: 0 Z-trim(112.1): 18  B-trim: 11 in 1/52
 Lambda= 0.101658
 statistics sampled from 12884 (12902) to 12884 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.75), E-opt: 0.2 (0.396), width:  16
 Scan time:  1.290

The best scores are:                                      opt bits E(32554)
CCDS4698.1 ATP6V1G2 gene_id:534|Hs108|chr6         ( 118)  753 120.9 1.9e-28
CCDS4699.1 ATP6V1G2 gene_id:534|Hs108|chr6         (  77)  506 84.5 1.1e-17
CCDS6807.1 ATP6V1G1 gene_id:9550|Hs108|chr9        ( 118)  497 83.3 3.8e-17
CCDS1395.1 ATP6V1G3 gene_id:127124|Hs108|chr1      ( 118)  437 74.5 1.7e-14
CCDS81414.1 ATP6V1G3 gene_id:127124|Hs108|chr1     ( 124)  411 70.7 2.5e-13


>>CCDS4698.1 ATP6V1G2 gene_id:534|Hs108|chr6              (118 aa)
 initn: 753 init1: 753 opt: 753  Z-score: 624.3  bits: 120.9 E(32554): 1.9e-28
Smith-Waterman score: 753; 100.0% identity (100.0% similar) in 118 aa overlap (1-118:1-118)

               10        20        30        40        50        60
pF1KE6 MASQSQGIQQLLQAEKRAAEKVADARKRKARRLKQAKEEAQMEVEQYRREREHEFQSKQQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 MASQSQGIQQLLQAEKRAAEKVADARKRKARRLKQAKEEAQMEVEQYRREREHEFQSKQQ
               10        20        30        40        50        60

               70        80        90       100       110        
pF1KE6 AAMGSQGNLSAEVEQATRRQVQGMQSSQQRNRERVLAQLLGMVCDVRPQVHPNYRISA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 AAMGSQGNLSAEVEQATRRQVQGMQSSQQRNRERVLAQLLGMVCDVRPQVHPNYRISA
               70        80        90       100       110        

>>CCDS4699.1 ATP6V1G2 gene_id:534|Hs108|chr6              (77 aa)
 initn: 506 init1: 506 opt: 506  Z-score: 431.0  bits: 84.5 E(32554): 1.1e-17
Smith-Waterman score: 506; 100.0% identity (100.0% similar) in 77 aa overlap (42-118:1-77)

              20        30        40        50        60        70 
pF1KE6 LQAEKRAAEKVADARKRKARRLKQAKEEAQMEVEQYRREREHEFQSKQQAAMGSQGNLSA
                                     ::::::::::::::::::::::::::::::
CCDS46                               MEVEQYRREREHEFQSKQQAAMGSQGNLSA
                                             10        20        30

              80        90       100       110        
pF1KE6 EVEQATRRQVQGMQSSQQRNRERVLAQLLGMVCDVRPQVHPNYRISA
       :::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 EVEQATRRQVQGMQSSQQRNRERVLAQLLGMVCDVRPQVHPNYRISA
               40        50        60        70       

>>CCDS6807.1 ATP6V1G1 gene_id:9550|Hs108|chr9             (118 aa)
 initn: 546 init1: 497 opt: 497  Z-score: 421.4  bits: 83.3 E(32554): 3.8e-17
Smith-Waterman score: 497; 64.1% identity (89.7% similar) in 117 aa overlap (1-117:1-117)

               10        20        30        40        50        60
pF1KE6 MASQSQGIQQLLQAEKRAAEKVADARKRKARRLKQAKEEAQMEVEQYRREREHEFQSKQQ
       ::::::::::::::::::::::..::::: ::::::::::: :.:::: .::.::..:. 
CCDS68 MASQSQGIQQLLQAEKRAAEKVSEARKRKNRRLKQAKEEAQAEIEQYRLQREKEFKAKEA
               10        20        30        40        50        60

               70        80        90       100       110        
pF1KE6 AAMGSQGNLSAEVEQATRRQVQGMQSSQQRNRERVLAQLLGMVCDVRPQVHPNYRISA
       ::.::.:. :.:::. :....  .:.  ..::..:: .::..:::.::..: ::::. 
CCDS68 AALGSRGSCSTEVEKETQEKMTILQTYFRQNRDEVLDNLLAFVCDIRPEIHENYRING
               70        80        90       100       110        

>>CCDS1395.1 ATP6V1G3 gene_id:127124|Hs108|chr1           (118 aa)
 initn: 484 init1: 430 opt: 437  Z-score: 373.8  bits: 74.5 E(32554): 1.7e-14
Smith-Waterman score: 437; 54.7% identity (83.8% similar) in 117 aa overlap (1-117:1-117)

               10        20        30        40        50        60
pF1KE6 MASQSQGIQQLLQAEKRAAEKVADARKRKARRLKQAKEEAQMEVEQYRREREHEFQSKQQ
       :.::::::.::::::::: .:. .:.:::..:::::::::..:..::: .:..::. ::.
CCDS13 MTSQSQGIHQLLQAEKRAKDKLEEAKKRKGKRLKQAKEEAMVEIDQYRMQRDKEFRLKQS
               10        20        30        40        50        60

               70        80        90       100       110        
pF1KE6 AAMGSQGNLSAEVEQATRRQVQGMQSSQQRNRERVLAQLLGMVCDVRPQVHPNYRISA
         ::::.::: :.:. :  ..: ...  ..  : :. :::.::::..:..: ::: . 
CCDS13 KIMGSQNNLSDEIEEQTLGKIQELNGHYNKYMESVMNQLLSMVCDMKPEIHVNYRATN
               70        80        90       100       110        

>>CCDS81414.1 ATP6V1G3 gene_id:127124|Hs108|chr1          (124 aa)
 initn: 454 init1: 300 opt: 411  Z-score: 352.9  bits: 70.7 E(32554): 2.5e-13
Smith-Waterman score: 411; 51.2% identity (79.7% similar) in 123 aa overlap (1-117:1-123)

               10        20              30        40        50    
pF1KE6 MASQSQGIQQLLQAEKRAAEKVADARKR------KARRLKQAKEEAQMEVEQYRREREHE
       :.::::::.::::::::: .:. .:.:.      :..:::::::::..:..::: .:..:
CCDS81 MTSQSQGIHQLLQAEKRAKDKLEEAKKKTGTASGKGKRLKQAKEEAMVEIDQYRMQRDKE
               10        20        30        40        50        60

           60        70        80        90       100       110    
pF1KE6 FQSKQQAAMGSQGNLSAEVEQATRRQVQGMQSSQQRNRERVLAQLLGMVCDVRPQVHPNY
       :. ::.  ::::.::: :.:. :  ..: ...  ..  : :. :::.::::..:..: ::
CCDS81 FRLKQSKIMGSQNNLSDEIEEQTLGKIQELNGHYNKYMESVMNQLLSMVCDMKPEIHVNY
               70        80        90       100       110       120

           
pF1KE6 RISA
       : . 
CCDS81 RATN
           




118 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Tue Nov  8 10:07:13 2016 done: Tue Nov  8 10:07:13 2016
 Total Scan time:  1.290 Total Display time: -0.020

Function used was FASTA [36.3.4 Apr, 2011]