Result of FASTA (ccds) for
pFN21AE6150
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE6150, 137 aa
1>>>pF1KE6150 137 - 137 aa - 137 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.0456+/-0.00084; mu= 11.6990+/- 0.050
mean_var=52.1756+/-10.278, 0's: 0 Z-trim(104.8): 22 B-trim: 0 in 0/49
Lambda= 0.177558
statistics sampled from 8074 (8096) to 8074 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.644), E-opt: 0.2 (0.249), width: 16
Scan time: 1.100
The best scores are: opt bits E(32554)
CCDS10301.1 CRABP1 gene_id:1381|Hs108|chr15 ( 137) 901 238.5 9.9e-64
CCDS1152.1 CRABP2 gene_id:1382|Hs108|chr1 ( 138) 694 185.5 9.1e-48
CCDS3110.2 RBP1 gene_id:5947|Hs108|chr3 ( 197) 334 93.3 7.2e-20
CCDS5127.1 FABP7 gene_id:2173|Hs108|chr6 ( 132) 318 89.1 8.7e-19
CCDS342.1 FABP3 gene_id:2170|Hs108|chr1 ( 133) 317 88.9 1e-18
CCDS6229.1 PMP2 gene_id:5375|Hs108|chr8 ( 132) 307 86.3 6.1e-18
CCDS109.1 RBP7 gene_id:116362|Hs108|chr1 ( 134) 305 85.8 8.8e-18
CCDS8574.1 RBP5 gene_id:83758|Hs108|chr12 ( 135) 296 83.5 4.4e-17
CCDS83121.1 FABP7 gene_id:2173|Hs108|chr6 ( 166) 290 82.0 1.5e-16
CCDS3109.1 RBP2 gene_id:5948|Hs108|chr3 ( 134) 281 79.7 6.3e-16
CCDS6230.1 FABP4 gene_id:2167|Hs108|chr8 ( 132) 272 77.4 3.1e-15
CCDS6228.1 FABP5 gene_id:2171|Hs108|chr8 ( 135) 269 76.6 5.3e-15
CCDS47882.1 FABP12 gene_id:646486|Hs108|chr8 ( 140) 265 75.6 1.1e-14
CCDS46925.1 RBP1 gene_id:5947|Hs108|chr3 ( 153) 248 71.2 2.5e-13
CCDS46926.1 RBP1 gene_id:5947|Hs108|chr3 ( 157) 245 70.5 4.3e-13
CCDS3712.1 FABP2 gene_id:2169|Hs108|chr4 ( 132) 233 67.4 3.1e-12
>>CCDS10301.1 CRABP1 gene_id:1381|Hs108|chr15 (137 aa)
initn: 901 init1: 901 opt: 901 Z-score: 1257.6 bits: 238.5 E(32554): 9.9e-64
Smith-Waterman score: 901; 99.3% identity (99.3% similar) in 137 aa overlap (1-137:1-137)
10 20 30 40 50 60
pF1KE6 MPNFAGTWKMRSSENFDELLKALGVNAMLRKVAVAAASKPHVEIRQDGDQFYIKTSTTVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 MPNFAGTWKMRSSENFDELLKALGVNAMLRKVAVAAASKPHVEIRQDGDQFYIKTSTTVR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 TTEINFKVGEGFEEETVDGRKCRSLATWENENKIHCTQTLLEGDGPKTYWTSELANDELI
::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::
CCDS10 TTEINFKVGEGFEEETVDGRKCRSLATWENENKIHCTQTLLEGDGPKTYWTRELANDELI
70 80 90 100 110 120
130
pF1KE6 LTFGADDVVCTRIYVRE
:::::::::::::::::
CCDS10 LTFGADDVVCTRIYVRE
130
>>CCDS1152.1 CRABP2 gene_id:1382|Hs108|chr1 (138 aa)
initn: 596 init1: 596 opt: 694 Z-score: 971.0 bits: 185.5 E(32554): 9.1e-48
Smith-Waterman score: 694; 76.1% identity (89.9% similar) in 138 aa overlap (1-137:1-138)
10 20 30 40 50 60
pF1KE6 MPNFAGTWKMRSSENFDELLKALGVNAMLRKVAVAAASKPHVEIRQDGDQFYIKTSTTVR
::::.:.::. ::::.::::.::::.::::.:::::::: :::.:.:: ::::::::::
CCDS11 MPNFSGNWKIIRSENFEELLKVLGVNVMLRKIAVAAASKPAVEIKQEGDTFYIKTSTTVR
10 20 30 40 50 60
70 80 90 100 110
pF1KE6 TTEINFKVGEGFEEETVDGRKCRSLATWENENKIHCTQTLLEGDGPKTYWTSELAND-EL
:::::::::: :::.::::: :.::. ::.:::. : : ::.:.:::: :: ::.:: ::
CCDS11 TTEINFKVGEEFEEQTVDGRPCKSLVKWESENKMVCEQKLLKGEGPKTSWTRELTNDGEL
70 80 90 100 110 120
120 130
pF1KE6 ILTFGADDVVCTRIYVRE
:::. ::::::::.::::
CCDS11 ILTMTADDVVCTRVYVRE
130
>>CCDS3110.2 RBP1 gene_id:5947|Hs108|chr3 (197 aa)
initn: 184 init1: 132 opt: 334 Z-score: 470.1 bits: 93.3 E(32554): 7.2e-20
Smith-Waterman score: 334; 40.9% identity (68.6% similar) in 137 aa overlap (1-134:63-193)
10 20
pF1KE6 MP-NFAGTWKMRSSENFDELLKALGVNAML
:: .:.: ::: .:::.: :.:: ::. :
CCDS31 HHPRSTGSRCPGSLQPSRPLVANWLQSLPEMPVDFTGYWKMLVNENFEEYLRALDVNVAL
40 50 60 70 80 90
30 40 50 60 70 80
pF1KE6 RKVAVAAASKPHVEIRQDGDQFYIKTSTTVRTTEINFKVGEGFEEET--VDGRKCRSLAT
::.: :: :: ::::.. :.: .: :. ..:.::. :::. .: ::: . ..
CCDS31 RKIA--NLLKPDKEIVQDGDHMIIRTLSTFRNYIMDFQVGKEFEEDLTGIDDRKCMTTVS
100 110 120 130 140 150
90 100 110 120 130
pF1KE6 WENENKIHCTQTLLEGDGPKTYWTSELANDELILTFGADDVVCTRIYVRE
:... :..:.: .:. ::. . .::: : . .. ::: ...
CCDS31 WDGD-KLQCVQ---KGEKEGRGWTQWIEGDELHLEMRVEGVVCKQVFKKVQ
160 170 180 190
>>CCDS5127.1 FABP7 gene_id:2173|Hs108|chr6 (132 aa)
initn: 341 init1: 173 opt: 318 Z-score: 450.8 bits: 89.1 E(32554): 8.7e-19
Smith-Waterman score: 318; 38.2% identity (71.8% similar) in 131 aa overlap (4-134:5-129)
10 20 30 40 50
pF1KE6 MPNFAGTWKMRSSENFDELLKALGVNAMLRKVAVAAASKPHVEIRQDGDQFYIKTSTTV
: .:::. .:.:::: .:::::. :.:. ..:: : : :.::. :.: .:
CCDS51 MVEAFCATWKLTNSQNFDEYMKALGVGFATRQVG--NVTKPTVIISQEGDKVVIRTLSTF
10 20 30 40 50
60 70 80 90 100 110
pF1KE6 RTTEINFKVGEGFEEETVDGRKCRSLATWENENKIHCTQTLLEGDGPKTYWTSELANDEL
..:::.:..:: :.: :.: :.:.:... .... .: . . :: .: .. :. . ..
CCDS51 KNTEISFQLGEEFDETTADDRNCKSVVSLDGDKLVH----IQKWDGKETNFVREIKDGKM
60 70 80 90 100 110
120 130
pF1KE6 ILTFGADDVVCTRIYVRE
..:. ::: .: :
CCDS51 VMTLTFGDVVAVRHYEKA
120 130
>>CCDS342.1 FABP3 gene_id:2170|Hs108|chr1 (133 aa)
initn: 322 init1: 152 opt: 317 Z-score: 449.4 bits: 88.9 E(32554): 1e-18
Smith-Waterman score: 317; 41.0% identity (69.4% similar) in 134 aa overlap (4-137:5-132)
10 20 30 40 50
pF1KE6 MPNFAGTWKMRSSENFDELLKALGVNAMLRKVAVAAASKPHVEIRQDGDQFYIKTSTTV
: ::::. .:.:::. .:.:::. :.:: . .:: . :...:: . .:: .:
CCDS34 MVDAFLGTWKLVDSKNFDDYMKSLGVGFATRQVA--SMTKPTTIIEKNGDILTLKTHSTF
10 20 30 40 50
60 70 80 90 100 110
pF1KE6 RTTEINFKVGEGFEEETVDGRKCRSLATWENENKIHCTQTLLEGDGPKTYWTSELANDEL
..:::.::.: :.: :.: :: .:..: .. . .: : . :: .: . :: . .:
CCDS34 KNTEISFKLGVEFDETTADDRKVKSIVTLDGGKLVH----LQKWDGQETTLVRELIDGKL
60 70 80 90 100 110
120 130
pF1KE6 ILTFGADDVVCTRIYVRE
:::. .:::: : .:
CCDS34 ILTLTHGTAVCTRTYEKEA
120 130
>>CCDS6229.1 PMP2 gene_id:5375|Hs108|chr8 (132 aa)
initn: 310 init1: 150 opt: 307 Z-score: 435.6 bits: 86.3 E(32554): 6.1e-18
Smith-Waterman score: 307; 43.0% identity (67.4% similar) in 135 aa overlap (1-134:1-129)
10 20 30 40 50
pF1KE6 MPN-FAGTWKMRSSENFDELLKALGVNAMLRKVAVAAASKPHVEIRQDGDQFYIKTSTTV
: : : ::::. ::::::. .:::::. ::.. : :: : : . :: . :.: .:
CCDS62 MSNKFLGTWKLVSSENFDDYMKALGVGLATRKLGNLA--KPTVIISKKGDIITIRTESTF
10 20 30 40 50
60 70 80 90 100 110
pF1KE6 RTTEINFKVGEGFEEETVDGRKCRSLATWENENKIHCTQTLLEGDGPKTYWTSELANDEL
..:::.::.:. ::: :.:.:: .:..: . ..... .: :: .: .:.: ..
CCDS62 KNTEISFKLGQEFEETTADNRKTKSIVTLQ-RGSLNQVQRW---DGKETTIKRKLVNGKM
60 70 80 90 100 110
120 130
pF1KE6 ILTFGADDVVCTRIYVRE
. :::::::
CCDS62 VAECKMKGVVCTRIYEKV
120 130
>>CCDS109.1 RBP7 gene_id:116362|Hs108|chr1 (134 aa)
initn: 304 init1: 145 opt: 305 Z-score: 432.7 bits: 85.8 E(32554): 8.8e-18
Smith-Waterman score: 305; 36.7% identity (67.6% similar) in 139 aa overlap (1-136:1-133)
10 20 30 40 50
pF1KE6 MP-NFAGTWKMRSSENFDELLKALGVNAMLRKVAVAAASKPHVEIRQDGDQFYIKTSTTV
:: ...::: . ::.::. . :::.. ::. : ::. :.:.::.: :.:....
CCDS10 MPADLSGTWTLLSSDNFEGYMLALGIDFATRKI--AKLLKPQKVIEQNGDSFTIHTNSSL
10 20 30 40 50
60 70 80 90 100 110
pF1KE6 RTTEINFKVGEGFEEET--VDGRKCRSLATWENENKIHCTQTLLEGDGPKTYWTSELAND
:. ..::::: :.:.. .:.:::.::. :.:. .. : : .:. . :: . .:
CCDS10 RNYFVKFKVGEEFDEDNRGLDNRKCKSLVIWDND-RLTCIQ---KGEKKNRGWTHWIEGD
60 70 80 90 100 110
120 130
pF1KE6 ELILTFGADDVVCTRIYVRE
.: : . . :: . . :
CCDS10 KLHLEMFCEGQVCKQTFQRA
120 130
>>CCDS8574.1 RBP5 gene_id:83758|Hs108|chr12 (135 aa)
initn: 172 init1: 160 opt: 296 Z-score: 420.2 bits: 83.5 E(32554): 4.4e-17
Smith-Waterman score: 296; 34.8% identity (71.1% similar) in 135 aa overlap (2-134:3-131)
10 20 30 40 50
pF1KE6 MPNFAGTWKMRSSENFDELLKALGVNAMLRKVAVAAASKPHVEIRQDGDQFYIKTSTTV
::..: ... :..:... :.::... .::.:. :: ::...:... ..: .:
CCDS85 MPPNLTGYYRFVSQKNMEDYLQALNISLAVRKIALLL--KPDKEIEHQGNHMTVRTLSTF
10 20 30 40 50
60 70 80 90 100 110
pF1KE6 RTTEINFKVGEGFEEE--TVDGRKCRSLATWENENKIHCTQTLLEGDGPKTYWTSELAND
:. ..: :: :::. .::::::....:::.:. . :.: .:. :. : : ..
CCDS85 RNYTVQFDVGVEFEEDLRSVDGRKCQTIVTWEEEHLV-CVQ---KGEVPNRGWRHWLEGE
60 70 80 90 100 110
120 130
pF1KE6 ELILTFGADDVVCTRIYVRE
: : . : :.:: ...
CCDS85 MLYLELTARDAVCEQVFRKVR
120 130
>>CCDS83121.1 FABP7 gene_id:2173|Hs108|chr6 (166 aa)
initn: 275 init1: 173 opt: 290 Z-score: 410.4 bits: 82.0 E(32554): 1.5e-16
Smith-Waterman score: 290; 37.3% identity (72.9% similar) in 118 aa overlap (4-121:5-116)
10 20 30 40 50
pF1KE6 MPNFAGTWKMRSSENFDELLKALGVNAMLRKVAVAAASKPHVEIRQDGDQFYIKTSTTV
: .:::. .:.:::: .:::::. :.:. ..:: : : :.::. :.: .:
CCDS83 MVEAFCATWKLTNSQNFDEYMKALGVGFATRQVG--NVTKPTVIISQEGDKVVIRTLSTF
10 20 30 40 50
60 70 80 90 100 110
pF1KE6 RTTEINFKVGEGFEEETVDGRKCRSLATWENENKIHCTQTLLEGDGPKTYWTSELANDEL
..:::.:..:: :.: :.: :.:.:... .... .: . . :: .: .. :. . ..
CCDS83 KNTEISFQLGEEFDETTADDRNCKSVVSLDGDKLVH----IQKWDGKETNFVREIKDGKM
60 70 80 90 100 110
120 130
pF1KE6 ILTFGADDVVCTRIYVRE
..
CCDS83 VMVSNDNSPFFLVFFSSPHTSHLLPSSSLLLPFFLLPSFFNNTSLARFFNYM
120 130 140 150 160
>>CCDS3109.1 RBP2 gene_id:5948|Hs108|chr3 (134 aa)
initn: 139 init1: 139 opt: 281 Z-score: 399.5 bits: 79.7 E(32554): 6.3e-16
Smith-Waterman score: 281; 35.8% identity (67.2% similar) in 134 aa overlap (6-137:7-134)
10 20 30 40 50
pF1KE6 MPNFAGTWKMRSSENFDELLKALGVNAMLRKVAVAAASKPHVEIRQDGDQFYIKTSTTV
:::.:.:.:::. .::: .. ::.:: .. .: : ::::.: ::..:
CCDS31 MTRDQNGTWEMESNENFEGYMKALDIDFATRKIAVRL-TQTKV-IDQDGDNFKTKTTSTF
10 20 30 40 50
60 70 80 90 100 110
pF1KE6 RTTEINFKVGEGFEEET--VDGRKCRSLATWENENKIHCTQTLLEGDGPKTYWTSELAND
:. ...: :: :.: : .:.:. ..:.:::.. . :.: .:. . : . . .:
CCDS31 RNYDVDFTVGVEFDEYTKSLDNRHVKALVTWEGDVLV-CVQ---KGEKENRGWKQWIEGD
60 70 80 90 100 110
120 130
pF1KE6 ELILTFGADDVVCTRIYVRE
.: : . : :: ... ..
CCDS31 KLYLELTCGDQVCRQVFKKK
120 130
137 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 09:53:26 2016 done: Tue Nov 8 09:53:26 2016
Total Scan time: 1.100 Total Display time: -0.020
Function used was FASTA [36.3.4 Apr, 2011]