Result of FASTA (ccds) for
pFN21AE5827
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE5827, 917 aa
1>>>pF1KE5827 917 - 917 aa - 917 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 14.3915+/-0.00126; mu= -19.5099+/- 0.076
mean_var=529.2999+/-108.994, 0's: 0 Z-trim(115.3): 49 B-trim: 0 in 0/54
Lambda= 0.055747
statistics sampled from 15820 (15867) to 15820 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.782), E-opt: 0.2 (0.487), width: 16
Scan time: 5.470
The best scores are: opt bits E(32554)
CCDS6797.1 RGS3 gene_id:5998|Hs108|chr9 ( 917) 6264 519.0 1.6e-146
CCDS43869.1 RGS3 gene_id:5998|Hs108|chr9 (1198) 6133 508.6 2.9e-143
CCDS6798.1 RGS3 gene_id:5998|Hs108|chr9 ( 519) 3525 298.6 2.1e-80
CCDS65111.1 RGS3 gene_id:5998|Hs108|chr9 ( 591) 2746 236.0 1.7e-61
CCDS35113.1 RGS3 gene_id:5998|Hs108|chr9 ( 602) 2626 226.3 1.3e-58
CCDS35114.1 RGS3 gene_id:5998|Hs108|chr9 ( 311) 1139 106.5 8e-23
>>CCDS6797.1 RGS3 gene_id:5998|Hs108|chr9 (917 aa)
initn: 6264 init1: 6264 opt: 6264 Z-score: 2744.1 bits: 519.0 E(32554): 1.6e-146
Smith-Waterman score: 6264; 99.9% identity (100.0% similar) in 917 aa overlap (1-917:1-917)
10 20 30 40 50 60
pF1KE5 MNRFNGLCKVCSERRYRQITIPRGKDGFGFTICCDSPVRVQAVDSGGPAERAGLQQLDTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS67 MNRFNGLCKVCSERRYRQITIPRGKDGFGFTICCDSPVRVQAVDSGGPAERAGLQQLDTV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 LQLNERPVEHWKCVELAHEIRSCPSEIILLVWRMVPQVKPGPDGGVLRRASCKSTHDLQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS67 LQLNERPVEHWKCVELAHEIRSCPSEIILLVWRMVPQVKPGPDGGVLRRASCKSTHDLQS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 PPNKREKNCTHGVQARPEQRHSCHLVCDSSDGLLLGGWERYTEVAKRGGQHTLPALSRAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS67 PPNKREKNCTHGVQARPEQRHSCHLVCDSSDGLLLGGWERYTEVAKRGGQHTLPALSRAT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 APTDPNYIILAPLNPGSQLLRPVYQEDTIPEESGSPSKGKSYTGLGKKSRLMKTVQTMKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS67 APTDPNYIILAPLNPGSQLLRPVYQEDTIPEESGSPSKGKSYTGLGKKSRLMKTVQTMKG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 HGNYQNCPVVRPHATHSSYGTYVTLAPKVLVFPVFVQPLDLCNPARTLLLSEELLLYEGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS67 HGNYQNCPVVRPHATHSSYGTYVTLAPKVLVFPVFVQPLDLCNPARTLLLSEELLLYEGR
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE5 NKAAEVTLFAYSDLLLFTKEDEPGRCDVLRNPLYLQSVKLQEGSSEDLKFCVLYLAEKAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS67 NKAAEVTLFAYSDLLLFTKEDEPGRCDVLRNPLYLQSVKLQEGSSEDLKFCVLYLAEKAE
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE5 CLFTLEAHSQEQKKRVCWCLSENIAKQQQLAASPPDSKMFETEADEKREMALEEGKGPGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS67 CLFTLEAHSQEQKKRVCWCLSENIAKQQQLAASPPDSKMFETEADEKREMALEEGKGPGA
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE5 EDSPPSKEPSPGQELPPGQDLPPSKDSPSGQEPAPSQEPLSSKDSATSEGSPPGPDAPPS
:::::::::::::::::::::::.::::::::::::::::::::::::::::::::::::
CCDS67 EDSPPSKEPSPGQELPPGQDLPPNKDSPSGQEPAPSQEPLSSKDSATSEGSPPGPDAPPS
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE5 KDVPPCQEPPPAQDLSPCQDLPAGQEPLPHQDPLLTKDLPAIQESPTRDLPPCQDLPPSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS67 KDVPPCQEPPPAQDLSPCQDLPAGQEPLPHQDPLLTKDLPAIQESPTRDLPPCQDLPPSQ
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE5 VSLPAKALTEDTMSSGDLLAATGDPPAAPRPAFVIPEVRLDSTYSQKAGAEQGCSGDEED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS67 VSLPAKALTEDTMSSGDLLAATGDPPAAPRPAFVIPEVRLDSTYSQKAGAEQGCSGDEED
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE5 AEEAEEVEEGEEGEEDEDEDTSDDNYGERSEAKRSSMIETGQGAEGGLSLRVQNSLRRRT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS67 AEEAEEVEEGEEGEEDEDEDTSDDNYGERSEAKRSSMIETGQGAEGGLSLRVQNSLRRRT
610 620 630 640 650 660
670 680 690 700 710 720
pF1KE5 HSEGSLLQEPRGPCFASDTTLHCSDGEGAASTWGMPSPSTLKKELGRNGGSMHHLSLFFT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS67 HSEGSLLQEPRGPCFASDTTLHCSDGEGAASTWGMPSPSTLKKELGRNGGSMHHLSLFFT
670 680 690 700 710 720
730 740 750 760 770 780
pF1KE5 GHRKMSGADTVGDDDEASRKRKSKNLAKDMKNKLGIFRRRNESPGAPPAGKADKMMKSFK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS67 GHRKMSGADTVGDDDEASRKRKSKNLAKDMKNKLGIFRRRNESPGAPPAGKADKMMKSFK
730 740 750 760 770 780
790 800 810 820 830 840
pF1KE5 PTSEEALKWGESLEKLLVHKYGLAVFQAFLRTEFSEENLEFWLACEDFKKVKSQSKMASK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS67 PTSEEALKWGESLEKLLVHKYGLAVFQAFLRTEFSEENLEFWLACEDFKKVKSQSKMASK
790 800 810 820 830 840
850 860 870 880 890 900
pF1KE5 AKKIFAEYIAIQACKEVNLDSYTREHTKDNLQSVTRGCFDLAQKRIFGLMEKDSYPRFLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS67 AKKIFAEYIAIQACKEVNLDSYTREHTKDNLQSVTRGCFDLAQKRIFGLMEKDSYPRFLR
850 860 870 880 890 900
910
pF1KE5 SDLYLDLINQKKMSPPL
:::::::::::::::::
CCDS67 SDLYLDLINQKKMSPPL
910
>>CCDS43869.1 RGS3 gene_id:5998|Hs108|chr9 (1198 aa)
initn: 6133 init1: 6133 opt: 6133 Z-score: 2685.5 bits: 508.6 E(32554): 2.9e-143
Smith-Waterman score: 6133; 99.8% identity (100.0% similar) in 900 aa overlap (18-917:299-1198)
10 20 30 40
pF1KE5 MNRFNGLCKVCSERRYRQITIPRGKDGFGFTICCDSPVRVQAVDSGG
.:::::::::::::::::::::::::::::
CCDS43 LKVARRRLRPLRDPLLRMPGGGDTENGKKLKITIPRGKDGFGFTICCDSPVRVQAVDSGG
270 280 290 300 310 320
50 60 70 80 90 100
pF1KE5 PAERAGLQQLDTVLQLNERPVEHWKCVELAHEIRSCPSEIILLVWRMVPQVKPGPDGGVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 PAERAGLQQLDTVLQLNERPVEHWKCVELAHEIRSCPSEIILLVWRMVPQVKPGPDGGVL
330 340 350 360 370 380
110 120 130 140 150 160
pF1KE5 RRASCKSTHDLQSPPNKREKNCTHGVQARPEQRHSCHLVCDSSDGLLLGGWERYTEVAKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 RRASCKSTHDLQSPPNKREKNCTHGVQARPEQRHSCHLVCDSSDGLLLGGWERYTEVAKR
390 400 410 420 430 440
170 180 190 200 210 220
pF1KE5 GGQHTLPALSRATAPTDPNYIILAPLNPGSQLLRPVYQEDTIPEESGSPSKGKSYTGLGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 GGQHTLPALSRATAPTDPNYIILAPLNPGSQLLRPVYQEDTIPEESGSPSKGKSYTGLGK
450 460 470 480 490 500
230 240 250 260 270 280
pF1KE5 KSRLMKTVQTMKGHGNYQNCPVVRPHATHSSYGTYVTLAPKVLVFPVFVQPLDLCNPART
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 KSRLMKTVQTMKGHGNYQNCPVVRPHATHSSYGTYVTLAPKVLVFPVFVQPLDLCNPART
510 520 530 540 550 560
290 300 310 320 330 340
pF1KE5 LLLSEELLLYEGRNKAAEVTLFAYSDLLLFTKEDEPGRCDVLRNPLYLQSVKLQEGSSED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 LLLSEELLLYEGRNKAAEVTLFAYSDLLLFTKEDEPGRCDVLRNPLYLQSVKLQEGSSED
570 580 590 600 610 620
350 360 370 380 390 400
pF1KE5 LKFCVLYLAEKAECLFTLEAHSQEQKKRVCWCLSENIAKQQQLAASPPDSKMFETEADEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 LKFCVLYLAEKAECLFTLEAHSQEQKKRVCWCLSENIAKQQQLAASPPDSKMFETEADEK
630 640 650 660 670 680
410 420 430 440 450 460
pF1KE5 REMALEEGKGPGAEDSPPSKEPSPGQELPPGQDLPPSKDSPSGQEPAPSQEPLSSKDSAT
::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::::
CCDS43 REMALEEGKGPGAEDSPPSKEPSPGQELPPGQDLPPNKDSPSGQEPAPSQEPLSSKDSAT
690 700 710 720 730 740
470 480 490 500 510 520
pF1KE5 SEGSPPGPDAPPSKDVPPCQEPPPAQDLSPCQDLPAGQEPLPHQDPLLTKDLPAIQESPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 SEGSPPGPDAPPSKDVPPCQEPPPAQDLSPCQDLPAGQEPLPHQDPLLTKDLPAIQESPT
750 760 770 780 790 800
530 540 550 560 570 580
pF1KE5 RDLPPCQDLPPSQVSLPAKALTEDTMSSGDLLAATGDPPAAPRPAFVIPEVRLDSTYSQK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 RDLPPCQDLPPSQVSLPAKALTEDTMSSGDLLAATGDPPAAPRPAFVIPEVRLDSTYSQK
810 820 830 840 850 860
590 600 610 620 630 640
pF1KE5 AGAEQGCSGDEEDAEEAEEVEEGEEGEEDEDEDTSDDNYGERSEAKRSSMIETGQGAEGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 AGAEQGCSGDEEDAEEAEEVEEGEEGEEDEDEDTSDDNYGERSEAKRSSMIETGQGAEGG
870 880 890 900 910 920
650 660 670 680 690 700
pF1KE5 LSLRVQNSLRRRTHSEGSLLQEPRGPCFASDTTLHCSDGEGAASTWGMPSPSTLKKELGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 LSLRVQNSLRRRTHSEGSLLQEPRGPCFASDTTLHCSDGEGAASTWGMPSPSTLKKELGR
930 940 950 960 970 980
710 720 730 740 750 760
pF1KE5 NGGSMHHLSLFFTGHRKMSGADTVGDDDEASRKRKSKNLAKDMKNKLGIFRRRNESPGAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 NGGSMHHLSLFFTGHRKMSGADTVGDDDEASRKRKSKNLAKDMKNKLGIFRRRNESPGAP
990 1000 1010 1020 1030 1040
770 780 790 800 810 820
pF1KE5 PAGKADKMMKSFKPTSEEALKWGESLEKLLVHKYGLAVFQAFLRTEFSEENLEFWLACED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 PAGKADKMMKSFKPTSEEALKWGESLEKLLVHKYGLAVFQAFLRTEFSEENLEFWLACED
1050 1060 1070 1080 1090 1100
830 840 850 860 870 880
pF1KE5 FKKVKSQSKMASKAKKIFAEYIAIQACKEVNLDSYTREHTKDNLQSVTRGCFDLAQKRIF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 FKKVKSQSKMASKAKKIFAEYIAIQACKEVNLDSYTREHTKDNLQSVTRGCFDLAQKRIF
1110 1120 1130 1140 1150 1160
890 900 910
pF1KE5 GLMEKDSYPRFLRSDLYLDLINQKKMSPPL
::::::::::::::::::::::::::::::
CCDS43 GLMEKDSYPRFLRSDLYLDLINQKKMSPPL
1170 1180 1190
>>CCDS6798.1 RGS3 gene_id:5998|Hs108|chr9 (519 aa)
initn: 3525 init1: 3525 opt: 3525 Z-score: 1557.1 bits: 298.6 E(32554): 2.1e-80
Smith-Waterman score: 3525; 99.8% identity (100.0% similar) in 519 aa overlap (399-917:1-519)
370 380 390 400 410 420
pF1KE5 SQEQKKRVCWCLSENIAKQQQLAASPPDSKMFETEADEKREMALEEGKGPGAEDSPPSKE
::::::::::::::::::::::::::::::
CCDS67 MFETEADEKREMALEEGKGPGAEDSPPSKE
10 20 30
430 440 450 460 470 480
pF1KE5 PSPGQELPPGQDLPPSKDSPSGQEPAPSQEPLSSKDSATSEGSPPGPDAPPSKDVPPCQE
:::::::::::::::.::::::::::::::::::::::::::::::::::::::::::::
CCDS67 PSPGQELPPGQDLPPNKDSPSGQEPAPSQEPLSSKDSATSEGSPPGPDAPPSKDVPPCQE
40 50 60 70 80 90
490 500 510 520 530 540
pF1KE5 PPPAQDLSPCQDLPAGQEPLPHQDPLLTKDLPAIQESPTRDLPPCQDLPPSQVSLPAKAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS67 PPPAQDLSPCQDLPAGQEPLPHQDPLLTKDLPAIQESPTRDLPPCQDLPPSQVSLPAKAL
100 110 120 130 140 150
550 560 570 580 590 600
pF1KE5 TEDTMSSGDLLAATGDPPAAPRPAFVIPEVRLDSTYSQKAGAEQGCSGDEEDAEEAEEVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS67 TEDTMSSGDLLAATGDPPAAPRPAFVIPEVRLDSTYSQKAGAEQGCSGDEEDAEEAEEVE
160 170 180 190 200 210
610 620 630 640 650 660
pF1KE5 EGEEGEEDEDEDTSDDNYGERSEAKRSSMIETGQGAEGGLSLRVQNSLRRRTHSEGSLLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS67 EGEEGEEDEDEDTSDDNYGERSEAKRSSMIETGQGAEGGLSLRVQNSLRRRTHSEGSLLQ
220 230 240 250 260 270
670 680 690 700 710 720
pF1KE5 EPRGPCFASDTTLHCSDGEGAASTWGMPSPSTLKKELGRNGGSMHHLSLFFTGHRKMSGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS67 EPRGPCFASDTTLHCSDGEGAASTWGMPSPSTLKKELGRNGGSMHHLSLFFTGHRKMSGA
280 290 300 310 320 330
730 740 750 760 770 780
pF1KE5 DTVGDDDEASRKRKSKNLAKDMKNKLGIFRRRNESPGAPPAGKADKMMKSFKPTSEEALK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS67 DTVGDDDEASRKRKSKNLAKDMKNKLGIFRRRNESPGAPPAGKADKMMKSFKPTSEEALK
340 350 360 370 380 390
790 800 810 820 830 840
pF1KE5 WGESLEKLLVHKYGLAVFQAFLRTEFSEENLEFWLACEDFKKVKSQSKMASKAKKIFAEY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS67 WGESLEKLLVHKYGLAVFQAFLRTEFSEENLEFWLACEDFKKVKSQSKMASKAKKIFAEY
400 410 420 430 440 450
850 860 870 880 890 900
pF1KE5 IAIQACKEVNLDSYTREHTKDNLQSVTRGCFDLAQKRIFGLMEKDSYPRFLRSDLYLDLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS67 IAIQACKEVNLDSYTREHTKDNLQSVTRGCFDLAQKRIFGLMEKDSYPRFLRSDLYLDLI
460 470 480 490 500 510
910
pF1KE5 NQKKMSPPL
:::::::::
CCDS67 NQKKMSPPL
>>CCDS65111.1 RGS3 gene_id:5998|Hs108|chr9 (591 aa)
initn: 2746 init1: 2746 opt: 2746 Z-score: 1217.7 bits: 236.0 E(32554): 1.7e-61
Smith-Waterman score: 3348; 64.4% identity (64.4% similar) in 917 aa overlap (1-917:1-591)
10 20 30 40 50 60
pF1KE5 MNRFNGLCKVCSERRYRQITIPRGKDGFGFTICCDSPVRVQAVDSGGPAERAGLQQLDTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 MNRFNGLCKVCSERRYRQITIPRGKDGFGFTICCDSPVRVQAVDSGGPAERAGLQQLDTV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 LQLNERPVEHWKCVELAHEIRSCPSEIILLVWRMVPQVKPGPDGGVLRRASCKSTHDLQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 LQLNERPVEHWKCVELAHEIRSCPSEIILLVWRMVPQVKPGPDGGVLRRASCKSTHDLQS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 PPNKREKNCTHGVQARPEQRHSCHLVCDSSDGLLLGGWERYTEVAKRGGQHTLPALSRAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 PPNKREKNCTHGVQARPEQRHSCHLVCDSSDGLLLGGWERYTEVAKRGGQHTLPALSRAT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 APTDPNYIILAPLNPGSQLLRPVYQEDTIPEESGSPSKGKSYTGLGKKSRLMKTVQTMKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 APTDPNYIILAPLNPGSQLLRPVYQEDTIPEESGSPSKGKSYTGLGKKSRLMKTVQTMKG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 HGNYQNCPVVRPHATHSSYGTYVTLAPKVLVFPVFVQPLDLCNPARTLLLSEELLLYEGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 HGNYQNCPVVRPHATHSSYGTYVTLAPKVLVFPVFVQPLDLCNPARTLLLSEELLLYEGR
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE5 NKAAEVTLFAYSDLLLFTKEDEPGRCDVLRNPLYLQSVKLQEGSSEDLKFCVLYLAEKAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 NKAAEVTLFAYSDLLLFTKEDEPGRCDVLRNPLYLQSVKLQEGSSEDLKFCVLYLAEKAE
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE5 CLFTLEAHSQEQKKRVCWCLSENIAKQQQLAASPPDSKMFETEADEKREMALEEGKGPGA
:::::::::::::::::::::::::::::::::::::::
CCDS65 CLFTLEAHSQEQKKRVCWCLSENIAKQQQLAASPPDSKM---------------------
370 380 390
430 440 450 460 470 480
pF1KE5 EDSPPSKEPSPGQELPPGQDLPPSKDSPSGQEPAPSQEPLSSKDSATSEGSPPGPDAPPS
CCDS65 ------------------------------------------------------------
490 500 510 520 530 540
pF1KE5 KDVPPCQEPPPAQDLSPCQDLPAGQEPLPHQDPLLTKDLPAIQESPTRDLPPCQDLPPSQ
CCDS65 ------------------------------------------------------------
550 560 570 580 590 600
pF1KE5 VSLPAKALTEDTMSSGDLLAATGDPPAAPRPAFVIPEVRLDSTYSQKAGAEQGCSGDEED
CCDS65 ------------------------------------------------------------
610 620 630 640 650 660
pF1KE5 AEEAEEVEEGEEGEEDEDEDTSDDNYGERSEAKRSSMIETGQGAEGGLSLRVQNSLRRRT
CCDS65 ------------------------------------------------------------
670 680 690 700 710 720
pF1KE5 HSEGSLLQEPRGPCFASDTTLHCSDGEGAASTWGMPSPSTLKKELGRNGGSMHHLSLFFT
CCDS65 ------------------------------------------------------------
730 740 750 760 770 780
pF1KE5 GHRKMSGADTVGDDDEASRKRKSKNLAKDMKNKLGIFRRRNESPGAPPAGKADKMMKSFK
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 -----SGADTVGDDDEASRKRKSKNLAKDMKNKLGIFRRRNESPGAPPAGKADKMMKSFK
400 410 420 430 440 450
790 800 810 820 830 840
pF1KE5 PTSEEALKWGESLEKLLVHKYGLAVFQAFLRTEFSEENLEFWLACEDFKKVKSQSKMASK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 PTSEEALKWGESLEKLLVHKYGLAVFQAFLRTEFSEENLEFWLACEDFKKVKSQSKMASK
460 470 480 490 500 510
850 860 870 880 890 900
pF1KE5 AKKIFAEYIAIQACKEVNLDSYTREHTKDNLQSVTRGCFDLAQKRIFGLMEKDSYPRFLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 AKKIFAEYIAIQACKEVNLDSYTREHTKDNLQSVTRGCFDLAQKRIFGLMEKDSYPRFLR
520 530 540 550 560 570
910
pF1KE5 SDLYLDLINQKKMSPPL
:::::::::::::::::
CCDS65 SDLYLDLINQKKMSPPL
580 590
>>CCDS35113.1 RGS3 gene_id:5998|Hs108|chr9 (602 aa)
initn: 2616 init1: 2616 opt: 2626 Z-score: 1165.5 bits: 226.3 E(32554): 1.3e-58
Smith-Waterman score: 2626; 92.8% identity (95.7% similar) in 418 aa overlap (18-435:187-600)
10 20 30 40
pF1KE5 MNRFNGLCKVCSERRYRQITIPRGKDGFGFTICCDSPVRVQAVDSGG
.:::::::::::::::::::::::::::::
CCDS35 LKVARRRLRPLRDPLLRMPGGGDTENGKKLKITIPRGKDGFGFTICCDSPVRVQAVDSGG
160 170 180 190 200 210
50 60 70 80 90 100
pF1KE5 PAERAGLQQLDTVLQLNERPVEHWKCVELAHEIRSCPSEIILLVWRMVPQVKPGPDGGVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 PAERAGLQQLDTVLQLNERPVEHWKCVELAHEIRSCPSEIILLVWRMVPQVKPGPDGGVL
220 230 240 250 260 270
110 120 130 140 150 160
pF1KE5 RRASCKSTHDLQSPPNKREKNCTHGVQARPEQRHSCHLVCDSSDGLLLGGWERYTEVAKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 RRASCKSTHDLQSPPNKREKNCTHGVQARPEQRHSCHLVCDSSDGLLLGGWERYTEVAKR
280 290 300 310 320 330
170 180 190 200 210 220
pF1KE5 GGQHTLPALSRATAPTDPNYIILAPLNPGSQLLRPVYQEDTIPEESGSPSKGKSYTGLGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 GGQHTLPALSRATAPTDPNYIILAPLNPGSQLLRPVYQEDTIPEESGSPSKGKSYTGLGK
340 350 360 370 380 390
230 240 250 260 270 280
pF1KE5 KSRLMKTVQTMKGHGNYQNCPVVRPHATHSSYGTYVTLAPKVLVFPVFVQPLDLCNPART
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 KSRLMKTVQTMKGHGNYQNCPVVRPHATHSSYGTYVTLAPKVLVFPVFVQPLDLCNPART
400 410 420 430 440 450
290 300 310 320 330 340
pF1KE5 LLLSEELLLYEGRNKAAEVTLFAYSDLLLFTKEDEPGRCDVLRNPLYLQSVKLQEGSSED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 LLLSEELLLYEGRNKAAEVTLFAYSDLLLFTKEDEPGRCDVLRNPLYLQSVKLQEGSSED
460 470 480 490 500 510
350 360 370 380 390 400
pF1KE5 LKFCVLYLAEKAECLFTLEAHSQEQKKRVCWCLSENIAKQQQLAASPPDSKMFETEADEK
::::::::::::::::::::::::::::::::::::::::::::::::::: .. .. .
CCDS35 LKFCVLYLAEKAECLFTLEAHSQEQKKRVCWCLSENIAKQQQLAASPPDSKKLHPFGSLQ
520 530 540 550 560 570
410 420 430 440 450 460
pF1KE5 REMALEEGKGPGAEDSPPSKEPSPGQELPPGQDLPPSKDSPSGQEPAPSQEPLSSKDSAT
.:: : ... . . :::: :
CCDS35 QEM----GPVNSTNATQDRSFTSPGQTLIG
580 590 600
>>CCDS35114.1 RGS3 gene_id:5998|Hs108|chr9 (311 aa)
initn: 1167 init1: 1131 opt: 1139 Z-score: 523.3 bits: 106.5 E(32554): 8e-23
Smith-Waterman score: 1139; 96.1% identity (98.9% similar) in 179 aa overlap (739-917:133-311)
710 720 730 740 750 760
pF1KE5 GGSMHHLSLFFTGHRKMSGADTVGDDDEASRKRKSKNLAKDMKNKLGIFRRRNESPGAPP
..:.. . ::::::::::::::::::::::
CCDS35 GASYRPICGPKVGGPTEMLRGMYLTRNGNLQRRHTMKEAKDMKNKLGIFRRRNESPGAPP
110 120 130 140 150 160
770 780 790 800 810 820
pF1KE5 AGKADKMMKSFKPTSEEALKWGESLEKLLVHKYGLAVFQAFLRTEFSEENLEFWLACEDF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 AGKADKMMKSFKPTSEEALKWGESLEKLLVHKYGLAVFQAFLRTEFSEENLEFWLACEDF
170 180 190 200 210 220
830 840 850 860 870 880
pF1KE5 KKVKSQSKMASKAKKIFAEYIAIQACKEVNLDSYTREHTKDNLQSVTRGCFDLAQKRIFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 KKVKSQSKMASKAKKIFAEYIAIQACKEVNLDSYTREHTKDNLQSVTRGCFDLAQKRIFG
230 240 250 260 270 280
890 900 910
pF1KE5 LMEKDSYPRFLRSDLYLDLINQKKMSPPL
:::::::::::::::::::::::::::::
CCDS35 LMEKDSYPRFLRSDLYLDLINQKKMSPPL
290 300 310
917 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 07:01:09 2016 done: Tue Nov 8 07:01:10 2016
Total Scan time: 5.470 Total Display time: 0.130
Function used was FASTA [36.3.4 Apr, 2011]