Result of FASTA (omim) for
pFN21AE5770
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE5770, 600 aa
1>>>pF1KE5770 600 - 600 aa - 600 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.7767+/-0.000494; mu= 8.0566+/- 0.031
mean_var=168.9265+/-33.574, 0's: 0 Z-trim(114.1): 118 B-trim: 1036 in 2/52
Lambda= 0.098679
statistics sampled from 23665 (23784) to 23665 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.625), E-opt: 0.2 (0.279), width: 16
Scan time: 9.600
The best scores are: opt bits E(85289)
NP_004389 (OMIM: 601235) probable ATP-dependent RN ( 875) 774 123.2 3.6e-27
NP_006764 (OMIM: 606355) ATP-dependent RNA helicas ( 670) 710 114.0 1.6e-24
NP_057439 (OMIM: 615428) probable ATP-dependent RN ( 455) 535 89.0 3.8e-17
XP_016866492 (OMIM: 606286) PREDICTED: probable AT ( 439) 520 86.8 1.6e-16
XP_011534229 (OMIM: 606286) PREDICTED: probable AT ( 529) 520 86.9 1.9e-16
XP_011534230 (OMIM: 606286) PREDICTED: probable AT ( 529) 520 86.9 1.9e-16
XP_011534228 (OMIM: 606286) PREDICTED: probable AT ( 604) 520 86.9 2.1e-16
NP_061135 (OMIM: 606286) probable ATP-dependent RN ( 648) 520 87.0 2.2e-16
XP_016872118 (OMIM: 610373) PREDICTED: ATP-depende ( 672) 515 86.3 3.7e-16
XP_011538446 (OMIM: 610373) PREDICTED: ATP-depende ( 672) 515 86.3 3.7e-16
XP_016872116 (OMIM: 610373) PREDICTED: ATP-depende ( 672) 515 86.3 3.7e-16
XP_016872117 (OMIM: 610373) PREDICTED: ATP-depende ( 672) 515 86.3 3.7e-16
XP_005270205 (OMIM: 610373) PREDICTED: ATP-depende ( 672) 515 86.3 3.7e-16
NP_076950 (OMIM: 610373) ATP-dependent RNA helicas ( 737) 515 86.3 4e-16
XP_016872115 (OMIM: 610373) PREDICTED: ATP-depende ( 737) 515 86.3 4e-16
NP_001243839 (OMIM: 606357) nucleolar RNA helicase ( 715) 504 84.7 1.2e-15
NP_004719 (OMIM: 606357) nucleolar RNA helicase 2 ( 783) 504 84.7 1.2e-15
NP_060365 (OMIM: 616621) probable ATP-dependent RN ( 796) 500 84.2 1.9e-15
NP_001308661 (OMIM: 608170,616871) probable ATP-de ( 496) 462 78.6 5.5e-14
NP_001308759 (OMIM: 608170,616871) probable ATP-de ( 496) 462 78.6 5.5e-14
NP_057306 (OMIM: 608170,616871) probable ATP-depen ( 622) 462 78.7 6.5e-14
NP_076977 (OMIM: 611665) ATP-dependent RNA helicas ( 881) 453 77.5 2.1e-13
NP_001104792 (OMIM: 611665) ATP-dependent RNA heli ( 882) 453 77.5 2.1e-13
NP_001160006 (OMIM: 605281) probable ATP-dependent ( 575) 424 73.3 2.6e-12
XP_011541799 (OMIM: 605281) PREDICTED: probable AT ( 678) 424 73.3 3e-12
NP_001136021 (OMIM: 605281) probable ATP-dependent ( 690) 424 73.3 3e-12
XP_011541797 (OMIM: 605281) PREDICTED: probable AT ( 698) 424 73.3 3e-12
NP_001160005 (OMIM: 605281) probable ATP-dependent ( 704) 424 73.3 3.1e-12
NP_077726 (OMIM: 605281) probable ATP-dependent RN ( 724) 424 73.3 3.1e-12
NP_006377 (OMIM: 608469) probable ATP-dependent RN ( 729) 415 72.0 7.6e-12
NP_001091974 (OMIM: 608469) probable ATP-dependent ( 731) 415 72.1 7.6e-12
NP_001309269 (OMIM: 616533) probable ATP-dependent ( 778) 407 70.9 1.8e-11
NP_001307526 (OMIM: 180630) probable ATP-dependent ( 614) 403 70.3 2.2e-11
NP_001307524 (OMIM: 180630) probable ATP-dependent ( 614) 403 70.3 2.2e-11
NP_004387 (OMIM: 180630) probable ATP-dependent RN ( 614) 403 70.3 2.2e-11
NP_001307525 (OMIM: 180630) probable ATP-dependent ( 614) 403 70.3 2.2e-11
NP_619526 (OMIM: 616533) probable ATP-dependent RN ( 585) 401 70.0 2.6e-11
XP_006711625 (OMIM: 174300,615464) PREDICTED: prob ( 557) 400 69.8 2.7e-11
NP_001307110 (OMIM: 174300,615464) probable ATP-de ( 567) 400 69.8 2.8e-11
NP_001278405 (OMIM: 612500) probable ATP-dependent ( 491) 388 68.1 8.1e-11
XP_011522534 (OMIM: 612500) PREDICTED: probable AT ( 581) 388 68.1 9.2e-11
NP_008941 (OMIM: 612500) probable ATP-dependent RN ( 599) 388 68.1 9.4e-11
NP_009135 (OMIM: 606168) probable ATP-dependent RN ( 824) 379 67.0 2.9e-10
XP_016884803 (OMIM: 300160,300958) PREDICTED: ATP- ( 475) 371 65.6 4.2e-10
XP_016884802 (OMIM: 300160,300958) PREDICTED: ATP- ( 476) 371 65.6 4.2e-10
XP_011523824 (OMIM: 268305,608546) PREDICTED: euka ( 390) 369 65.3 4.4e-10
XP_011542194 (OMIM: 300160,300958) PREDICTED: ATP- ( 598) 372 65.9 4.6e-10
NP_055555 (OMIM: 268305,608546) eukaryotic initiat ( 411) 369 65.3 4.6e-10
NP_001180346 (OMIM: 300160,300958) ATP-dependent R ( 646) 372 65.9 4.8e-10
NP_001180345 (OMIM: 300160,300958) ATP-dependent R ( 661) 372 65.9 4.9e-10
>>NP_004389 (OMIM: 601235) probable ATP-dependent RNA he (875 aa)
initn: 877 init1: 321 opt: 774 Z-score: 608.7 bits: 123.2 E(85289): 3.6e-27
Smith-Waterman score: 1054; 36.3% identity (67.8% similar) in 559 aa overlap (15-568:75-600)
10 20 30 40
pF1KE5 MEHVTEGSWESLPVPLHPQVLGALRELGFPYMTPVQSATIPLFM
:: ..: .:.: . .: .:. :: : .
NP_004 EWQVERESISRLMQNYEKINVNEITRFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLAL
50 60 70 80 90 100
50 60 70 80 90 100
pF1KE5 RNKDVAAEAVTGSGKTLAFVIPILEILLRREEKLKKSQVGAIIITPTRELAIQIDEVLSH
..::: . : :::::::::..:.:: : : . . . .:..::.:::::: : ::: .
NP_004 QGKDVLGAAKTGSGKTLAFLVPVLEALYRLQWT-STDGLGVLIISPTRELAYQTFEVLRK
110 120 130 140 150 160
110 120 130 140 150 160
pF1KE5 FTKHFPEFSQILWIGGRNPGEDVERFKQQGGNIIVATPGRLEDMFRRKAEGLDLASCVRS
:. .:: : :::.. ...::... ::.: ::::: ... : ... . .
NP_004 VGKNH-DFSAGLIIGGKDLKHEAERINNI--NILVCTPGRL---LQHMDETVSFHA--TD
170 180 190 200 210
170 180 190 200 210 220
pF1KE5 LDVLVLDEADRLLDMGFEASINTILEFLPKQRRTGLFSATQTQEVENLVRAGLRNPVRVS
:..::::::::.::::: ..:...: :::.:.: :::::::. :..:.: .:.:: :
NP_004 LQMLVLDEADRILDMGFADTMNAVIENLPKKRQTLLFSATQTKSVKDLARLSLKNPEYVW
220 230 240 250 260 270
230 240 250 260 270 280
pF1KE5 VKEKGVAASSAQKTPSRLENYYMVCKADEKFNQLVHFLRNHKQEKHLVFFSTCACVEYYG
:.:: . .::. ::. :.::. ..:.. : :::.: ..: .::::.: :.:
NP_004 VHEK-----AKYSTPATLEQNYIVCELQQKISVLYSFLRSHLKKKSIVFFSSCKEVQYLY
280 290 300 310 320 330
290 300 310 320 330 340
pF1KE5 KALEVLVKGVKIMCIHGKMK-YKRNKIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQY
... : ::.:. .::... ..: ... :: . ....: ::. :::.:.: ::::::.
NP_004 RVFCRLRPGVSILALHGRQQQMRRMEVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQF
340 350 360 370 380 390
350 360 370 380 390 400
pF1KE5 DPPSNASAFVHRCGRTARIGHGGSALVFLLPMEESYINFLAINQKCPLQEMK--PQRNTA
: : .:....:: ::::: . : ::..::: :..... : ...: :..:.: :..
NP_004 DCPEDANTYIHRAGRTARYKEDGEALLILLPSEKAMVQQL-LQKKVPVKEIKINPEK-LI
400 410 420 430 440
410 420 430 440 450 460
pF1KE5 DLLPKLKSMALADRAVFEKGMKAFVSYVQAYAKHECNLIFRLKDLDFASLARGFALLRMP
:. ::.:. :. . :.... :::::.. . . .: .. : . : ...: :
NP_004 DVQKKLESILAQDQDLKERAQRCFVSYVRSVYLMKDKEVFDVSKLPIPEYALSLGLAVAP
450 460 470 480 490 500
470 480 490 500 510 520
pF1KE5 KMPELRGKQFPDFVPVDVNTDTIPFKDKIREKQRQKLLEQQRREKTENEGRRKFIKNKAW
.. :. : : :. .: .: .:..: : . :. ..: .:.
NP_004 RVRFLQKMQ------------KQPTKELVR-SQADKVIEP-RAPSLTNDEVEEF---RAY
510 520 530 540 550
530 540 550 560 570
pF1KE5 SKQKAKKEKK--KKMNEKRKREEGSDIEDEDMEELLNDTRLLKKLKKGKITEEEFEKGLL
..: . .: :... ..:.... ..:. :: .. .. .:: :.:
NP_004 FNEKMSILQKGGKRLEGTEHRQDNDTGNEEQEEEEDDEEEMEEKLAKAKGSQAPSLPNTS
560 570 580 590 600 610
580 590 600
pF1KE5 TTGKRTIKTVDLGISDLEDDC
NP_004 EAQKIKEVPTQFLDRDEEEEDADFLKVKRHNVFGLDLKDEKTLQKKEPSKSSIKKKMTKV
620 630 640 650 660 670
>>NP_006764 (OMIM: 606355) ATP-dependent RNA helicase DD (670 aa)
initn: 836 init1: 264 opt: 710 Z-score: 561.1 bits: 114.0 E(85289): 1.6e-24
Smith-Waterman score: 991; 35.9% identity (68.5% similar) in 518 aa overlap (8-520:178-662)
10 20 30
pF1KE5 MEHVTEGSWESLPVPLHPQVLGALRELGFPYMTPVQS
:. :: .. ..: :..:.:: :: .:
NP_006 ENNVEKPDNDEDESEVPSLPLGLTGAFEDTSFASLCNLVNENTLKAIKEMGFTNMTEIQH
150 160 170 180 190 200
40 50 60 70 80 90
pF1KE5 ATIPLFMRNKDVAAEAVTGSGKTLAFVIPILEILLRREEKLKKSQVGAIIITPTRELAIQ
.: .....:. : : :::::::::.:: .:.... . . .. .:..:..::::::.:
NP_006 KSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKLRF-MPRNGTGVLILSPTRELAMQ
210 220 230 240 250 260
100 110 120 130 140 150
pF1KE5 IDEVLSHF-TKHFPEFSQILWIGGRNPGEDVERFKQQGGNIIVATPGRLEDMFRRKAEGL
::... :.: .. :. :: : . ..... . : :::::::::: : .. .. :.
NP_006 TFGVLKELMTHHVHTYGLIM--GGSNRSAEAQKLGN-GINIIVATPGRLLDHMQ-NTPGF
270 280 290 300 310 320
160 170 180 190 200 210
pF1KE5 DLASCVRSLDVLVLDEADRLLDMGFEASINTILEFLPKQRRTGLFSATQTQEVENLVRAG
..:. ::.:::::.::.::: .. :...:: .:.: :::::::..::.:.: .
NP_006 ----MYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRRQTMLFSATQTRKVEDLARIS
330 340 350 360 370
220 230 240 250 260 270
pF1KE5 LRN-PVRVSVKEKGVAASSAQKTPSRLENYYMVCKADEKFNQLVHFLRNHKQEKHLVFFS
:.. :. : :: ..:. : . ::. :.:: ....: : ::......: .::::
NP_006 LKKEPLYV-----GVDDDKANATVDGLEQGYVVCPSEKRFLLLFTFLKKNRKKKLMVFFS
380 390 400 410 420 430
280 290 300 310 320 330
pF1KE5 TCACVEYYGKALEVLVKGVKIMCIHGKMKY-KRNKIFMEFRKLQSGILVCTDVMARGIDI
.: :.:. . :. . . .. ::::.: ::. :..: . .:: :.:::: :::.::
NP_006 SCMSVKYHYELLNYI--DLPVLAIHGKQKQNKRTTTFFQFCNADSGTLLCTDVAARGLDI
440 450 460 470 480 490
340 350 360 370 380 390
pF1KE5 PEVNWVLQYDPPSNASAFVHRCGRTARIGHG-GSALVFLLPMEESYINFLAINQKCPLQE
:::.:..:::::.. . ..:: ::::: .: : ::..: : : ... .: ..: ::.:
NP_006 PEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILRPEELGFLRYLK-QSKVPLSE
500 510 520 530 540 550
400 410 420 430 440 450
pF1KE5 MK-PQRNTADLLPKLKSMALADRAVFEKGMKAFVSYVQAYAKHECNLIFRLKDLDFASLA
. . .:. .:... . . .....:. ::..:: .: . :: ...:.. ..:
NP_006 FDFSWSKISDIQSQLEKLIEKNYFLHKSAQEAYKSYIRAYDSHSLKQIFNVNNLNLPQVA
560 570 580 590 600 610
460 470 480 490 500 510
pF1KE5 RGFALLRMPKMPELRGKQFPDFVPVDVNTDTIPFKDKIREKQRQKLLEQQRREKTENEGR
.: : . : :: ..::.. . : ... . :. .:.:.
NP_006 LSF------------GFKVPPFVDLNVNSN----EGKQKKRGGGGGFGYQKTKKVEKSKI
620 630 640 650
520 530 540 550 560 570
pF1KE5 RKFIKNKAWSKQKAKKEKKKKMNEKRKREEGSDIEDEDMEELLNDTRLLKKLKKGKITEE
: :..:.
NP_006 FKHISKKSSDSRQFSH
660 670
>>NP_057439 (OMIM: 615428) probable ATP-dependent RNA he (455 aa)
initn: 612 init1: 216 opt: 535 Z-score: 428.8 bits: 89.0 E(85289): 3.8e-17
Smith-Waterman score: 689; 37.0% identity (68.1% similar) in 351 aa overlap (23-372:38-367)
10 20 30 40 50
pF1KE5 MEHVTEGSWESLPVPLHPQVLGALRELGFPYMTPVQSATIPLFMRNKDVAAE
: .::. : .: .::: ....:. .
NP_057 DSPTEASQPIVEEEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGL
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE5 AVTGSGKTLAFVIPILEILLRREEKLKKSQVGAIIITPTRELAIQIDEVLSHFTKHFPEF
: :::::: ::..:::. ::. ..: :...:::::::.::.: . . . .
NP_057 AETGSGKTGAFALPILNALLETPQRLF-----ALVLTPTRELAFQISEQFEALGSSIGVQ
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE5 SQILWIGGRNPGEDVERFKQQGGNIIVATPGRLEDMFRRKAEGLDLASCVRSLDVLVLDE
: .. .:: . . . .. .::.:::::: : .. ...:..: :.: ::.::
NP_057 SAVI-VGGIDSMSQSLALAKKP-HIIIATPGRLIDHLE-NTKGFNL----RALKYLVMDE
130 140 150 160 170
180 190 200 210 220 230
pF1KE5 ADRLLDMGFEASINTILEFLPKQRRTGLFSATQTQEVENLVRAGLRNPVRVSVKEKGVAA
:::.:.: ::. .. ::. .:..:.: :::::.:..:..: ::.:.:::. .:
NP_057 ADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAV-------
180 190 200 210 220
240 250 260 270 280 290
pF1KE5 SSAQKTPSRLENYYMVCKADEKFNQLVHFLRNHKQEKHLVFFSTCACVEYYGKALEVLVK
:: .: .:..::. . : . ::..: . .. ..: ::: .. . :. :
NP_057 SSKYQTVEKLQQYYIFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNL--
230 240 250 260 270 280
300 310 320 330 340 350
pF1KE5 GVKIMCIHGKM-KYKRNKIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASA
: . .::.: . :: . .:. .::. ::: .::.:::.:. :...: :....
NP_057 GFTAIPLHGQMSQSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKD
290 300 310 320 330 340
360 370 380 390 400 410
pF1KE5 FVHRCGRTARIGHGGSALVFLLPMEESYINFLAINQKCPLQEMKPQRNTADLLPKLKSMA
..:: ::::: :..:.:..:.
NP_057 YIHRVGRTARAGRSGKAITFVTQYDVELFQRIEHLIGKKLPGFPTQDDEVMMLTERVAEA
350 360 370 380 390 400
>>XP_016866492 (OMIM: 606286) PREDICTED: probable ATP-de (439 aa)
initn: 506 init1: 155 opt: 520 Z-score: 417.4 bits: 86.8 E(85289): 1.6e-16
Smith-Waterman score: 603; 31.8% identity (66.6% similar) in 359 aa overlap (17-372:41-382)
10 20 30 40
pF1KE5 MEHVTEGSWESLPVPLHPQVLGALRELGFPYMTPVQSATIPLFMRN
.:.:. ... :: ::.:: . :. ...
XP_016 NFNITWDDLKDGEKRPIPNPTCTFDDAFQCYPEVMENIKKAGFQKPTPIQSQAWPIVLQG
20 30 40 50 60 70
50 60 70 80 90 100
pF1KE5 KDVAAEAVTGSGKTLAFVIP-ILEILLRREEKLKKSQVGAIIITPTRELAIQIDEVLSHF
:. . : ::.:::: ...: .....:. : .... : ...:::::::.:.. ..
XP_016 IDLIGVAQTGTGKTLCYLMPGFIHLVLQPSLKGQRNRPGMLVLTPTRELALQVEGECCKY
80 90 100 110 120 130
110 120 130 140 150 160
pF1KE5 TKHFPEFSQILWIGGRNPGEDVERFKQQGGNIIVATPGRLEDMFRRKAEGLDLASCVRSL
. . . .. :: : :..:..:. : .::.::::::.:. . .. ..: ...
XP_016 S--YKGLRSVCVYGGGNRDEQIEELKK-GVDIIIATPGRLNDL--QMSNFVNL----KNI
140 150 160 170 180
170 180 190 200 210 220
pF1KE5 DVLVLDEADRLLDMGFEASINTILEFLPKQRRTGLFSATQTQEVENLVRAGLRNPVRVSV
:::::::..:::::: .: :: . .:.: . ::: . :. :... :..:. : :
XP_016 TYLVLDEADKMLDMGFEPQIMKILLDVRPDRQTVMTSATWPHSVHRLAQSYLKEPMIVYV
190 200 210 220 230 240
230 240 250 260 270 280
pF1KE5 KEKGVAASSAQKTPSRLENYYMVCKADEKFNQLVHFLRNHKQ-EKHLVFFSTCACVEYYG
..: :. : .: .: .::.... ::.. .. .: .:: : : ... .
XP_016 GTLDLVAVSSVK-----QNI-IVTTEEEKWSHMQTFLQSMSSTDKVIVFVSRKAVADHLS
250 260 270 280 290
290 300 310 320 330 340
pF1KE5 KALEVLVKGVKIMCIHG-KMKYKRNKIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQY
. .... .... .:: . . :.: . .:. . ::. ::. .::.:. .:. : ..
XP_016 S--DLILGNISVESLHGDREQRDREKALENFKTGKVRILIATDLASRGLDVHDVTHVYNF
300 310 320 330 340 350
350 360 370 380 390 400
pF1KE5 DPPSNASAFVHRCGRTARIGHGGSALVFLLPMEESYINFLAINQKCPLQEMKPQRNTADL
: : : .::: :::.: :. : ... :
XP_016 DFPRNIEEYVHRIGRTGRAGRTGVSITTLTRNDWRVASELINILERANQSIPEELVSMAE
360 370 380 390 400 410
>>XP_011534229 (OMIM: 606286) PREDICTED: probable ATP-de (529 aa)
initn: 506 init1: 155 opt: 520 Z-score: 416.3 bits: 86.9 E(85289): 1.9e-16
Smith-Waterman score: 603; 31.8% identity (66.6% similar) in 359 aa overlap (17-372:131-472)
10 20 30 40
pF1KE5 MEHVTEGSWESLPVPLHPQVLGALRELGFPYMTPVQSATIPLFMRN
.:.:. ... :: ::.:: . :. ...
XP_011 NFNITWDDLKDGEKRPIPNPTCTFDDAFQCYPEVMENIKKAGFQKPTPIQSQAWPIVLQG
110 120 130 140 150 160
50 60 70 80 90 100
pF1KE5 KDVAAEAVTGSGKTLAFVIP-ILEILLRREEKLKKSQVGAIIITPTRELAIQIDEVLSHF
:. . : ::.:::: ...: .....:. : .... : ...:::::::.:.. ..
XP_011 IDLIGVAQTGTGKTLCYLMPGFIHLVLQPSLKGQRNRPGMLVLTPTRELALQVEGECCKY
170 180 190 200 210 220
110 120 130 140 150 160
pF1KE5 TKHFPEFSQILWIGGRNPGEDVERFKQQGGNIIVATPGRLEDMFRRKAEGLDLASCVRSL
. . . .. :: : :..:..:. : .::.::::::.:. . .. ..: ...
XP_011 S--YKGLRSVCVYGGGNRDEQIEELKK-GVDIIIATPGRLNDL--QMSNFVNL----KNI
230 240 250 260 270
170 180 190 200 210 220
pF1KE5 DVLVLDEADRLLDMGFEASINTILEFLPKQRRTGLFSATQTQEVENLVRAGLRNPVRVSV
:::::::..:::::: .: :: . .:.: . ::: . :. :... :..:. : :
XP_011 TYLVLDEADKMLDMGFEPQIMKILLDVRPDRQTVMTSATWPHSVHRLAQSYLKEPMIVYV
280 290 300 310 320 330
230 240 250 260 270 280
pF1KE5 KEKGVAASSAQKTPSRLENYYMVCKADEKFNQLVHFLRNHKQ-EKHLVFFSTCACVEYYG
..: :. : .: .: .::.... ::.. .. .: .:: : : ... .
XP_011 GTLDLVAVSSVK-----QNI-IVTTEEEKWSHMQTFLQSMSSTDKVIVFVSRKAVADHLS
340 350 360 370 380
290 300 310 320 330 340
pF1KE5 KALEVLVKGVKIMCIHG-KMKYKRNKIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQY
. .... .... .:: . . :.: . .:. . ::. ::. .::.:. .:. : ..
XP_011 S--DLILGNISVESLHGDREQRDREKALENFKTGKVRILIATDLASRGLDVHDVTHVYNF
390 400 410 420 430 440
350 360 370 380 390 400
pF1KE5 DPPSNASAFVHRCGRTARIGHGGSALVFLLPMEESYINFLAINQKCPLQEMKPQRNTADL
: : : .::: :::.: :. : ... :
XP_011 DFPRNIEEYVHRIGRTGRAGRTGVSITTLTRNDWRVASELINILERANQSIPEELVSMAE
450 460 470 480 490 500
>>XP_011534230 (OMIM: 606286) PREDICTED: probable ATP-de (529 aa)
initn: 506 init1: 155 opt: 520 Z-score: 416.3 bits: 86.9 E(85289): 1.9e-16
Smith-Waterman score: 603; 31.8% identity (66.6% similar) in 359 aa overlap (17-372:131-472)
10 20 30 40
pF1KE5 MEHVTEGSWESLPVPLHPQVLGALRELGFPYMTPVQSATIPLFMRN
.:.:. ... :: ::.:: . :. ...
XP_011 NFNITWDDLKDGEKRPIPNPTCTFDDAFQCYPEVMENIKKAGFQKPTPIQSQAWPIVLQG
110 120 130 140 150 160
50 60 70 80 90 100
pF1KE5 KDVAAEAVTGSGKTLAFVIP-ILEILLRREEKLKKSQVGAIIITPTRELAIQIDEVLSHF
:. . : ::.:::: ...: .....:. : .... : ...:::::::.:.. ..
XP_011 IDLIGVAQTGTGKTLCYLMPGFIHLVLQPSLKGQRNRPGMLVLTPTRELALQVEGECCKY
170 180 190 200 210 220
110 120 130 140 150 160
pF1KE5 TKHFPEFSQILWIGGRNPGEDVERFKQQGGNIIVATPGRLEDMFRRKAEGLDLASCVRSL
. . . .. :: : :..:..:. : .::.::::::.:. . .. ..: ...
XP_011 S--YKGLRSVCVYGGGNRDEQIEELKK-GVDIIIATPGRLNDL--QMSNFVNL----KNI
230 240 250 260 270
170 180 190 200 210 220
pF1KE5 DVLVLDEADRLLDMGFEASINTILEFLPKQRRTGLFSATQTQEVENLVRAGLRNPVRVSV
:::::::..:::::: .: :: . .:.: . ::: . :. :... :..:. : :
XP_011 TYLVLDEADKMLDMGFEPQIMKILLDVRPDRQTVMTSATWPHSVHRLAQSYLKEPMIVYV
280 290 300 310 320 330
230 240 250 260 270 280
pF1KE5 KEKGVAASSAQKTPSRLENYYMVCKADEKFNQLVHFLRNHKQ-EKHLVFFSTCACVEYYG
..: :. : .: .: .::.... ::.. .. .: .:: : : ... .
XP_011 GTLDLVAVSSVK-----QNI-IVTTEEEKWSHMQTFLQSMSSTDKVIVFVSRKAVADHLS
340 350 360 370 380
290 300 310 320 330 340
pF1KE5 KALEVLVKGVKIMCIHG-KMKYKRNKIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQY
. .... .... .:: . . :.: . .:. . ::. ::. .::.:. .:. : ..
XP_011 S--DLILGNISVESLHGDREQRDREKALENFKTGKVRILIATDLASRGLDVHDVTHVYNF
390 400 410 420 430 440
350 360 370 380 390 400
pF1KE5 DPPSNASAFVHRCGRTARIGHGGSALVFLLPMEESYINFLAINQKCPLQEMKPQRNTADL
: : : .::: :::.: :. : ... :
XP_011 DFPRNIEEYVHRIGRTGRAGRTGVSITTLTRNDWRVASELINILERANQSIPEELVSMAE
450 460 470 480 490 500
>>XP_011534228 (OMIM: 606286) PREDICTED: probable ATP-de (604 aa)
initn: 506 init1: 155 opt: 520 Z-score: 415.5 bits: 86.9 E(85289): 2.1e-16
Smith-Waterman score: 603; 31.8% identity (66.6% similar) in 359 aa overlap (17-372:206-547)
10 20 30 40
pF1KE5 MEHVTEGSWESLPVPLHPQVLGALRELGFPYMTPVQSATIPLFMRN
.:.:. ... :: ::.:: . :. ...
XP_011 NFNITWDDLKDGEKRPIPNPTCTFDDAFQCYPEVMENIKKAGFQKPTPIQSQAWPIVLQG
180 190 200 210 220 230
50 60 70 80 90 100
pF1KE5 KDVAAEAVTGSGKTLAFVIP-ILEILLRREEKLKKSQVGAIIITPTRELAIQIDEVLSHF
:. . : ::.:::: ...: .....:. : .... : ...:::::::.:.. ..
XP_011 IDLIGVAQTGTGKTLCYLMPGFIHLVLQPSLKGQRNRPGMLVLTPTRELALQVEGECCKY
240 250 260 270 280 290
110 120 130 140 150 160
pF1KE5 TKHFPEFSQILWIGGRNPGEDVERFKQQGGNIIVATPGRLEDMFRRKAEGLDLASCVRSL
. . . .. :: : :..:..:. : .::.::::::.:. . .. ..: ...
XP_011 S--YKGLRSVCVYGGGNRDEQIEELKK-GVDIIIATPGRLNDL--QMSNFVNL----KNI
300 310 320 330 340
170 180 190 200 210 220
pF1KE5 DVLVLDEADRLLDMGFEASINTILEFLPKQRRTGLFSATQTQEVENLVRAGLRNPVRVSV
:::::::..:::::: .: :: . .:.: . ::: . :. :... :..:. : :
XP_011 TYLVLDEADKMLDMGFEPQIMKILLDVRPDRQTVMTSATWPHSVHRLAQSYLKEPMIVYV
350 360 370 380 390 400
230 240 250 260 270 280
pF1KE5 KEKGVAASSAQKTPSRLENYYMVCKADEKFNQLVHFLRNHKQ-EKHLVFFSTCACVEYYG
..: :. : .: .: .::.... ::.. .. .: .:: : : ... .
XP_011 GTLDLVAVSSVK-----QNI-IVTTEEEKWSHMQTFLQSMSSTDKVIVFVSRKAVADHLS
410 420 430 440 450 460
290 300 310 320 330 340
pF1KE5 KALEVLVKGVKIMCIHG-KMKYKRNKIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQY
. .... .... .:: . . :.: . .:. . ::. ::. .::.:. .:. : ..
XP_011 S--DLILGNISVESLHGDREQRDREKALENFKTGKVRILIATDLASRGLDVHDVTHVYNF
470 480 490 500 510
350 360 370 380 390 400
pF1KE5 DPPSNASAFVHRCGRTARIGHGGSALVFLLPMEESYINFLAINQKCPLQEMKPQRNTADL
: : : .::: :::.: :. : ... :
XP_011 DFPRNIEEYVHRIGRTGRAGRTGVSITTLTRNDWRVASELINILERANQSIPEELVSMAE
520 530 540 550 560 570
>>NP_061135 (OMIM: 606286) probable ATP-dependent RNA he (648 aa)
initn: 506 init1: 155 opt: 520 Z-score: 415.1 bits: 87.0 E(85289): 2.2e-16
Smith-Waterman score: 603; 31.8% identity (66.6% similar) in 359 aa overlap (17-372:250-591)
10 20 30 40
pF1KE5 MEHVTEGSWESLPVPLHPQVLGALRELGFPYMTPVQSATIPLFMRN
.:.:. ... :: ::.:: . :. ...
NP_061 NFNITWDDLKDGEKRPIPNPTCTFDDAFQCYPEVMENIKKAGFQKPTPIQSQAWPIVLQG
220 230 240 250 260 270
50 60 70 80 90 100
pF1KE5 KDVAAEAVTGSGKTLAFVIP-ILEILLRREEKLKKSQVGAIIITPTRELAIQIDEVLSHF
:. . : ::.:::: ...: .....:. : .... : ...:::::::.:.. ..
NP_061 IDLIGVAQTGTGKTLCYLMPGFIHLVLQPSLKGQRNRPGMLVLTPTRELALQVEGECCKY
280 290 300 310 320 330
110 120 130 140 150 160
pF1KE5 TKHFPEFSQILWIGGRNPGEDVERFKQQGGNIIVATPGRLEDMFRRKAEGLDLASCVRSL
. . . .. :: : :..:..:. : .::.::::::.:. . .. ..: ...
NP_061 S--YKGLRSVCVYGGGNRDEQIEELKK-GVDIIIATPGRLNDL--QMSNFVNL----KNI
340 350 360 370 380 390
170 180 190 200 210 220
pF1KE5 DVLVLDEADRLLDMGFEASINTILEFLPKQRRTGLFSATQTQEVENLVRAGLRNPVRVSV
:::::::..:::::: .: :: . .:.: . ::: . :. :... :..:. : :
NP_061 TYLVLDEADKMLDMGFEPQIMKILLDVRPDRQTVMTSATWPHSVHRLAQSYLKEPMIVYV
400 410 420 430 440 450
230 240 250 260 270 280
pF1KE5 KEKGVAASSAQKTPSRLENYYMVCKADEKFNQLVHFLRNHKQ-EKHLVFFSTCACVEYYG
..: :. : .: .: .::.... ::.. .. .: .:: : : ... .
NP_061 GTLDLVAVSSVK-----QNI-IVTTEEEKWSHMQTFLQSMSSTDKVIVFVSRKAVADHLS
460 470 480 490 500
290 300 310 320 330 340
pF1KE5 KALEVLVKGVKIMCIHG-KMKYKRNKIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQY
. .... .... .:: . . :.: . .:. . ::. ::. .::.:. .:. : ..
NP_061 S--DLILGNISVESLHGDREQRDREKALENFKTGKVRILIATDLASRGLDVHDVTHVYNF
510 520 530 540 550 560
350 360 370 380 390 400
pF1KE5 DPPSNASAFVHRCGRTARIGHGGSALVFLLPMEESYINFLAINQKCPLQEMKPQRNTADL
: : : .::: :::.: :. : ... :
NP_061 DFPRNIEEYVHRIGRTGRAGRTGVSITTLTRNDWRVASELINILERANQSIPEELVSMAE
570 580 590 600 610 620
>>XP_016872118 (OMIM: 610373) PREDICTED: ATP-dependent R (672 aa)
initn: 438 init1: 206 opt: 515 Z-score: 411.0 bits: 86.3 E(85289): 3.7e-16
Smith-Waterman score: 561; 29.4% identity (62.9% similar) in 415 aa overlap (6-410:71-463)
10 20 30
pF1KE5 MEHVTEGSWESLPVPLHPQVLGALRELGFPYMTPV
::.. ..:. ... :. : :. :.
XP_016 KKSKRVSSLDTSTHKSSDNKLEETLTREQKEGAFSNFPIS--EETIKLLKGRGVTYLFPI
50 60 70 80 90
40 50 60 70 80 90
pF1KE5 QSATIPLFMRNKDVAAEAVTGSGKTLAFVIPILEILLRREEKLKKSQVGAIII-TPTREL
: :. ...::. :.: ::.:::..:.::..: : : .: .:::. ... .:::::
XP_016 QVKTFGPVYEGKDLIAQARTGTGKTFSFAIPLIERLQRNQETIKKSRSPKVLVLAPTREL
100 110 120 130 140 150
100 110 120 130 140 150
pF1KE5 AIQIDEVLSHFTKHFPEFSQILWIGGRNPGEDVERFKQQGGNIIVATPGRLEDMFRRKAE
: :. . .. .:. ..: . :: . ....... : .:.:.::::..: . ..
XP_016 ANQVAKDFKDITR---KLSVACFYGGTSYQSQINHIRN-GIDILVGTPGRIKDHL--QSG
160 170 180 190 200 210
160 170 180 190 200
pF1KE5 GLDLASCVRSLDVLVLDEADRLLDMGFEASINTILEFLPKQR-----RTGLFSATQTQEV
:::.. : .::::.:..::.:: ... :.. : .: ::::: : :
XP_016 RLDLSK----LRHVVLDEVDQMLDLGFAEQVEDIIHESYKTDSEDNPQTLLFSATCPQWV
220 230 240 250 260
210 220 230 240 250 260
pF1KE5 ENLVRAGLRNPVRVSVKEKGVAASSAQKTPSRLENYYMVCKADEKFNQLVHFLRNHK--Q
.... ... .. .... .::. . .:. . :. ... . :. .. .
XP_016 YKVAKKYMKS----RYEQVDLVGKMTQKAATTVEHLAIQCHWSQRPAVIGDVLQVYSGSE
270 280 290 300 310 320
270 280 290 300 310 320
pF1KE5 EKHLVFFSTCACVEYYGKALEVLVKGVKIMCIHGKMKYKRNKIFME-FRKLQSGILVCTD
. ..: : : . :.. .: . .:.:: . .. .: .. ::. . .:: :.
XP_016 GRAIIFCETKKNVTEM--AMNPHIKQ-NAQCLHGDIAQSQREITLKGFREGSFKVLVATN
330 340 350 360 370 380
330 340 350 360 370 380
pF1KE5 VMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTARIGHGGSALVFLLPMEESYINFLAIN
: :::.:::::. :.: .::... ...:: :::.: :. : . : : :.. . . ..
XP_016 VAARGLDIPEVDLVIQSSPPQDVESYIHRSGRTGRAGRTGICICFYQPRERGQLRY--VE
390 400 410 420 430
390 400 410 420 430 440
pF1KE5 QKCPLQEMKPQR-NTADLLPKLKSMALADRAVFEKGMKAFVSYVQAYAKHECNLIFRLKD
:: . . .: ::. : :::
XP_016 QKAGITFKRVGVPSTMDLV-KSKSMDAIRSLASVSYAAVDFFRPSAQRLIEEKGAVDALA
440 450 460 470 480 490
>>XP_011538446 (OMIM: 610373) PREDICTED: ATP-dependent R (672 aa)
initn: 438 init1: 206 opt: 515 Z-score: 411.0 bits: 86.3 E(85289): 3.7e-16
Smith-Waterman score: 561; 29.4% identity (62.9% similar) in 415 aa overlap (6-410:71-463)
10 20 30
pF1KE5 MEHVTEGSWESLPVPLHPQVLGALRELGFPYMTPV
::.. ..:. ... :. : :. :.
XP_011 KKSKRVSSLDTSTHKSSDNKLEETLTREQKEGAFSNFPIS--EETIKLLKGRGVTYLFPI
50 60 70 80 90
40 50 60 70 80 90
pF1KE5 QSATIPLFMRNKDVAAEAVTGSGKTLAFVIPILEILLRREEKLKKSQVGAIII-TPTREL
: :. ...::. :.: ::.:::..:.::..: : : .: .:::. ... .:::::
XP_011 QVKTFGPVYEGKDLIAQARTGTGKTFSFAIPLIERLQRNQETIKKSRSPKVLVLAPTREL
100 110 120 130 140 150
100 110 120 130 140 150
pF1KE5 AIQIDEVLSHFTKHFPEFSQILWIGGRNPGEDVERFKQQGGNIIVATPGRLEDMFRRKAE
: :. . .. .:. ..: . :: . ....... : .:.:.::::..: . ..
XP_011 ANQVAKDFKDITR---KLSVACFYGGTSYQSQINHIRN-GIDILVGTPGRIKDHL--QSG
160 170 180 190 200 210
160 170 180 190 200
pF1KE5 GLDLASCVRSLDVLVLDEADRLLDMGFEASINTILEFLPKQR-----RTGLFSATQTQEV
:::.. : .::::.:..::.:: ... :.. : .: ::::: : :
XP_011 RLDLSK----LRHVVLDEVDQMLDLGFAEQVEDIIHESYKTDSEDNPQTLLFSATCPQWV
220 230 240 250 260
210 220 230 240 250 260
pF1KE5 ENLVRAGLRNPVRVSVKEKGVAASSAQKTPSRLENYYMVCKADEKFNQLVHFLRNHK--Q
.... ... .. .... .::. . .:. . :. ... . :. .. .
XP_011 YKVAKKYMKS----RYEQVDLVGKMTQKAATTVEHLAIQCHWSQRPAVIGDVLQVYSGSE
270 280 290 300 310 320
270 280 290 300 310 320
pF1KE5 EKHLVFFSTCACVEYYGKALEVLVKGVKIMCIHGKMKYKRNKIFME-FRKLQSGILVCTD
. ..: : : . :.. .: . .:.:: . .. .: .. ::. . .:: :.
XP_011 GRAIIFCETKKNVTEM--AMNPHIKQ-NAQCLHGDIAQSQREITLKGFREGSFKVLVATN
330 340 350 360 370 380
330 340 350 360 370 380
pF1KE5 VMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTARIGHGGSALVFLLPMEESYINFLAIN
: :::.:::::. :.: .::... ...:: :::.: :. : . : : :.. . . ..
XP_011 VAARGLDIPEVDLVIQSSPPQDVESYIHRSGRTGRAGRTGICICFYQPRERGQLRY--VE
390 400 410 420 430
390 400 410 420 430 440
pF1KE5 QKCPLQEMKPQR-NTADLLPKLKSMALADRAVFEKGMKAFVSYVQAYAKHECNLIFRLKD
:: . . .: ::. : :::
XP_011 QKAGITFKRVGVPSTMDLV-KSKSMDAIRSLASVSYAAVDFFRPSAQRLIEEKGAVDALA
440 450 460 470 480 490
600 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 04:56:48 2016 done: Tue Nov 8 04:56:49 2016
Total Scan time: 9.600 Total Display time: 0.050
Function used was FASTA [36.3.4 Apr, 2011]