Result of FASTA (ccds) for
pFN21AE5765
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE5765, 983 aa
1>>>pF1KE5765 983 - 983 aa - 983 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 12.7057+/-0.00128; mu= -6.8365+/- 0.078
mean_var=640.6690+/-130.380, 0's: 0 Z-trim(115.8): 49 B-trim: 238 in 2/52
Lambda= 0.050671
statistics sampled from 16387 (16425) to 16387 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.768), E-opt: 0.2 (0.505), width: 16
Scan time: 5.070
The best scores are: opt bits E(32554)
CCDS66566.1 RBM26 gene_id:64062|Hs108|chr13 ( 983) 6590 497.5 5.3e-140
CCDS9462.1 RBM26 gene_id:64062|Hs108|chr13 ( 980) 6555 495.0 3.1e-139
CCDS73591.1 RBM26 gene_id:64062|Hs108|chr13 (1009) 4555 348.8 3.2e-95
CCDS43378.1 RBM27 gene_id:54439|Hs108|chr5 (1060) 883 80.4 2.1e-14
>>CCDS66566.1 RBM26 gene_id:64062|Hs108|chr13 (983 aa)
initn: 6590 init1: 6590 opt: 6590 Z-score: 2627.0 bits: 497.5 E(32554): 5.3e-140
Smith-Waterman score: 6590; 100.0% identity (100.0% similar) in 983 aa overlap (1-983:1-983)
10 20 30 40 50 60
pF1KE5 MVSKMIIENFEALKSWLSKTLEPICDADPSALAKYVLALVKKDKSEKELKALCIDQLDVF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 MVSKMIIENFEALKSWLSKTLEPICDADPSALAKYVLALVKKDKSEKELKALCIDQLDVF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 LQKETQIFVEKLFDAVNTKSYLPPPEQPSSGSLKVEFFPHQEKDIKKEEITKEEEREKKF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 LQKETQIFVEKLFDAVNTKSYLPPPEQPSSGSLKVEFFPHQEKDIKKEEITKEEEREKKF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 SRRLNHSPPQSSSRYRENRSRDERKKDDRSRKRDYDRNPPRRDSYRDRYNRRRGRSRSYS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 SRRLNHSPPQSSSRYRENRSRDERKKDDRSRKRDYDRNPPRRDSYRDRYNRRRGRSRSYS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 RSRSRSWSKERLRERDRDRSRTRSRSRTRSRERDLVKPKYDLDRTDPLENNYTPVSSVPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 RSRSRSWSKERLRERDRDRSRTRSRSRTRSRERDLVKPKYDLDRTDPLENNYTPVSSVPS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 ISSGHYPVPTLSSTITVIAPTHHGNNTTESWSEFHEDQVDHNSYVRPPMPKKRCRDYDEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 ISSGHYPVPTLSSTITVIAPTHHGNNTTESWSEFHEDQVDHNSYVRPPMPKKRCRDYDEK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE5 GFCMRGDMCPFDHGSDPVVVEDVNLPGMLPFPAQPPVVEGPPPPGLPPPPPILTPPPVNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 GFCMRGDMCPFDHGSDPVVVEDVNLPGMLPFPAQPPVVEGPPPPGLPPPPPILTPPPVNL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE5 RPPVPPPGPLPPSLPPVTGPPPPLPPLQPSGMDAPPNSATSSVPTVVTTGIHHQPPPAPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 RPPVPPPGPLPPSLPPVTGPPPPLPPLQPSGMDAPPNSATSSVPTVVTTGIHHQPPPAPP
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE5 SLFTADTYDTDGYNPEAPSITNTSRPMYRHRVHAQRPNLIGLTSGDMDLPPREKPPNKSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 SLFTADTYDTDGYNPEAPSITNTSRPMYRHRVHAQRPNLIGLTSGDMDLPPREKPPNKSS
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE5 MRIVVDSESRKRTIGSGEPGVPTKKTWFDKPNFNRTNSPGFQKKVQFGNENTKLELRKVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 MRIVVDSESRKRTIGSGEPGVPTKKTWFDKPNFNRTNSPGFQKKVQFGNENTKLELRKVP
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE5 PELNNISKLNEHFSRFGTLVNLQVAYNGDPEGALIQFATYEEAKKAISSTEAVLNNRFIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 PELNNISKLNEHFSRFGTLVNLQVAYNGDPEGALIQFATYEEAKKAISSTEAVLNNRFIK
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE5 VYWHREGSTQQLQTTSPKVMQPLVQQPILPVVKQSVKERLGPVPSSTIEPAEAQSASSDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 VYWHREGSTQQLQTTSPKVMQPLVQQPILPVVKQSVKERLGPVPSSTIEPAEAQSASSDL
610 620 630 640 650 660
670 680 690 700 710 720
pF1KE5 PQVLSTSTGLTKTVYNPAALKAAQKTLLVSTSAVDNNEAQKKKQEALKLQQDVRKRKQEI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 PQVLSTSTGLTKTVYNPAALKAAQKTLLVSTSAVDNNEAQKKKQEALKLQQDVRKRKQEI
670 680 690 700 710 720
730 740 750 760 770 780
pF1KE5 LEKHIETQKMLISKLEKNKTMKSEDKAEIMKTLEVLTKNITKLKDEVKAASPGRCLPKSI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 LEKHIETQKMLISKLEKNKTMKSEDKAEIMKTLEVLTKNITKLKDEVKAASPGRCLPKSI
730 740 750 760 770 780
790 800 810 820 830 840
pF1KE5 KTKTQMQKELLDTELDLYKKMQAGEEVTELRRKYTELQLEAAKRGILSSGRGRGIHSRGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 KTKTQMQKELLDTELDLYKKMQAGEEVTELRRKYTELQLEAAKRGILSSGRGRGIHSRGR
790 800 810 820 830 840
850 860 870 880 890 900
pF1KE5 GAVHGRGRGRGRGRGVPGHAVVDHRPRALEISAFTESDREDLLPHFAQYGEIEDCQIDDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 GAVHGRGRGRGRGRGVPGHAVVDHRPRALEISAFTESDREDLLPHFAQYGEIEDCQIDDS
850 860 870 880 890 900
910 920 930 940 950 960
pF1KE5 SLHAVITFKTRAEAEAAAVHGARFKGQDLKLAWNKPVTNISAVETEEVEPDEEEFQEESL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 SLHAVITFKTRAEAEAAAVHGARFKGQDLKLAWNKPVTNISAVETEEVEPDEEEFQEESL
910 920 930 940 950 960
970 980
pF1KE5 VDDSLLQDDDEEEEDNESRSWRR
:::::::::::::::::::::::
CCDS66 VDDSLLQDDDEEEEDNESRSWRR
970 980
>>CCDS9462.1 RBM26 gene_id:64062|Hs108|chr13 (980 aa)
initn: 4268 init1: 4268 opt: 6555 Z-score: 2613.2 bits: 495.0 E(32554): 3.1e-139
Smith-Waterman score: 6555; 99.7% identity (99.7% similar) in 983 aa overlap (1-983:1-980)
10 20 30 40 50 60
pF1KE5 MVSKMIIENFEALKSWLSKTLEPICDADPSALAKYVLALVKKDKSEKELKALCIDQLDVF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS94 MVSKMIIENFEALKSWLSKTLEPICDADPSALAKYVLALVKKDKSEKELKALCIDQLDVF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 LQKETQIFVEKLFDAVNTKSYLPPPEQPSSGSLKVEFFPHQEKDIKKEEITKEEEREKKF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS94 LQKETQIFVEKLFDAVNTKSYLPPPEQPSSGSLKVEFFPHQEKDIKKEEITKEEEREKKF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 SRRLNHSPPQSSSRYRENRSRDERKKDDRSRKRDYDRNPPRRDSYRDRYNRRRGRSRSYS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS94 SRRLNHSPPQSSSRYRENRSRDERKKDDRSRKRDYDRNPPRRDSYRDRYNRRRGRSRSYS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 RSRSRSWSKERLRERDRDRSRTRSRSRTRSRERDLVKPKYDLDRTDPLENNYTPVSSVPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS94 RSRSRSWSKERLRERDRDRSRTRSRSRTRSRERDLVKPKYDLDRTDPLENNYTPVSSVPS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 ISSGHYPVPTLSSTITVIAPTHHGNNTTESWSEFHEDQVDHNSYVRPPMPKKRCRDYDEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS94 ISSGHYPVPTLSSTITVIAPTHHGNNTTESWSEFHEDQVDHNSYVRPPMPKKRCRDYDEK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE5 GFCMRGDMCPFDHGSDPVVVEDVNLPGMLPFPAQPPVVEGPPPPGLPPPPPILTPPPVNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS94 GFCMRGDMCPFDHGSDPVVVEDVNLPGMLPFPAQPPVVEGPPPPGLPPPPPILTPPPVNL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE5 RPPVPPPGPLPPSLPPVTGPPPPLPPLQPSGMDAPPNSATSSVPTVVTTGIHHQPPPAPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS94 RPPVPPPGPLPPSLPPVTGPPPPLPPLQPSGMDAPPNSATSSVPTVVTTGIHHQPPPAPP
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE5 SLFTADTYDTDGYNPEAPSITNTSRPMYRHRVHAQRPNLIGLTSGDMDLPPREKPPNKSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS94 SLFTADTYDTDGYNPEAPSITNTSRPMYRHRVHAQRPNLIGLTSGDMDLPPREKPPNKSS
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE5 MRIVVDSESRKRTIGSGEPGVPTKKTWFDKPNFNRTNSPGFQKKVQFGNENTKLELRKVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS94 MRIVVDSESRKRTIGSGEPGVPTKKTWFDKPNFNRTNSPGFQKKVQFGNENTKLELRKVP
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE5 PELNNISKLNEHFSRFGTLVNLQVAYNGDPEGALIQFATYEEAKKAISSTEAVLNNRFIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS94 PELNNISKLNEHFSRFGTLVNLQVAYNGDPEGALIQFATYEEAKKAISSTEAVLNNRFIK
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE5 VYWHREGSTQQLQTTSPKVMQPLVQQPILPVVKQSVKERLGPVPSSTIEPAEAQSASSDL
:::::::::::::::::: :::::::::::::::::::::::::::::::::::::::
CCDS94 VYWHREGSTQQLQTTSPK---PLVQQPILPVVKQSVKERLGPVPSSTIEPAEAQSASSDL
610 620 630 640 650
670 680 690 700 710 720
pF1KE5 PQVLSTSTGLTKTVYNPAALKAAQKTLLVSTSAVDNNEAQKKKQEALKLQQDVRKRKQEI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS94 PQVLSTSTGLTKTVYNPAALKAAQKTLLVSTSAVDNNEAQKKKQEALKLQQDVRKRKQEI
660 670 680 690 700 710
730 740 750 760 770 780
pF1KE5 LEKHIETQKMLISKLEKNKTMKSEDKAEIMKTLEVLTKNITKLKDEVKAASPGRCLPKSI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS94 LEKHIETQKMLISKLEKNKTMKSEDKAEIMKTLEVLTKNITKLKDEVKAASPGRCLPKSI
720 730 740 750 760 770
790 800 810 820 830 840
pF1KE5 KTKTQMQKELLDTELDLYKKMQAGEEVTELRRKYTELQLEAAKRGILSSGRGRGIHSRGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS94 KTKTQMQKELLDTELDLYKKMQAGEEVTELRRKYTELQLEAAKRGILSSGRGRGIHSRGR
780 790 800 810 820 830
850 860 870 880 890 900
pF1KE5 GAVHGRGRGRGRGRGVPGHAVVDHRPRALEISAFTESDREDLLPHFAQYGEIEDCQIDDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS94 GAVHGRGRGRGRGRGVPGHAVVDHRPRALEISAFTESDREDLLPHFAQYGEIEDCQIDDS
840 850 860 870 880 890
910 920 930 940 950 960
pF1KE5 SLHAVITFKTRAEAEAAAVHGARFKGQDLKLAWNKPVTNISAVETEEVEPDEEEFQEESL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS94 SLHAVITFKTRAEAEAAAVHGARFKGQDLKLAWNKPVTNISAVETEEVEPDEEEFQEESL
900 910 920 930 940 950
970 980
pF1KE5 VDDSLLQDDDEEEEDNESRSWRR
:::::::::::::::::::::::
CCDS94 VDDSLLQDDDEEEEDNESRSWRR
960 970 980
>>CCDS73591.1 RBM26 gene_id:64062|Hs108|chr13 (1009 aa)
initn: 5008 init1: 2978 opt: 4555 Z-score: 1822.9 bits: 348.8 E(32554): 3.2e-95
Smith-Waterman score: 6477; 96.8% identity (96.8% similar) in 1012 aa overlap (1-983:1-1009)
10 20 30 40 50 60
pF1KE5 MVSKMIIENFEALKSWLSKTLEPICDADPSALAKYVLALVKKDKSEKELKALCIDQLDVF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 MVSKMIIENFEALKSWLSKTLEPICDADPSALAKYVLALVKKDKSEKELKALCIDQLDVF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 LQKETQIFVEKLFDAVNTKSYLPPPEQPSSGSLKVEFFPHQEKDIKKEEITKEEEREKKF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 LQKETQIFVEKLFDAVNTKSYLPPPEQPSSGSLKVEFFPHQEKDIKKEEITKEEEREKKF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 SRRLNHSPPQSSSRYRENRSRDERKKDDRSRKRDYDRNPPRRDSYRDRYNRRRGRSRSYS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 SRRLNHSPPQSSSRYRENRSRDERKKDDRSRKRDYDRNPPRRDSYRDRYNRRRGRSRSYS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 RSRSRSWSKERLRERDRDRSRTRSRSRTRSRERDLVKPKYDLDRTDPLENNYTPVSSVPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 RSRSRSWSKERLRERDRDRSRTRSRSRTRSRERDLVKPKYDLDRTDPLENNYTPVSSVPS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 ISSGHYPVPTLSSTITVIAPTHHGNNTTESWSEFHEDQVDHNSYVRPPMPKKRCRDYDEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 ISSGHYPVPTLSSTITVIAPTHHGNNTTESWSEFHEDQVDHNSYVRPPMPKKRCRDYDEK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE5 GFCMRGDMCPFDHGSDPVVVEDVNLPGMLPFPAQPPVVEGPPPPGLPPPPPILTPPPVNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 GFCMRGDMCPFDHGSDPVVVEDVNLPGMLPFPAQPPVVEGPPPPGLPPPPPILTPPPVNL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE5 RPPVPPPGPLPPSLPPVTGPPPPLPPLQPSGMDAPPNSATSSVPTVVTTGIHHQPPPAPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 RPPVPPPGPLPPSLPPVTGPPPPLPPLQPSGMDAPPNSATSSVPTVVTTGIHHQPPPAPP
370 380 390 400 410 420
430 440 450 460 470
pF1KE5 SLFTA-----DTYDTDGYNPEAPSITNTSRPMYRHRVHAQRPNLIGLTSGDMDLPPREKP
::::: ::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 SLFTAVFVLPDTYDTDGYNPEAPSITNTSRPMYRHRVHAQRPNLIGLTSGDMDLPPREKP
430 440 450 460 470 480
480 490 500 510 520 530
pF1KE5 PNKSSMRIVVDSESRKRTIGSGEPGVPTKKTWFDKPNFNRTNSPGFQKKVQFGNENTKLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 PNKSSMRIVVDSESRKRTIGSGEPGVPTKKTWFDKPNFNRTNSPGFQKKVQFGNENTKLE
490 500 510 520 530 540
540 550 560 570 580 590
pF1KE5 LRKVPPELNNISKLNEHFSRFGTLVNLQVAYNGDPEGALIQFATYEEAKKAISSTEAVLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 LRKVPPELNNISKLNEHFSRFGTLVNLQVAYNGDPEGALIQFATYEEAKKAISSTEAVLN
550 560 570 580 590 600
600 610 620 630 640 650
pF1KE5 NRFIKVYWHREGSTQQLQTTSPKVMQPLVQQPILPVVKQSVKERLGPVPSSTIEPAEAQS
::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::
CCDS73 NRFIKVYWHREGSTQQLQTTSPK---PLVQQPILPVVKQSVKERLGPVPSSTIEPAEAQS
610 620 630 640 650
660 670 680 690
pF1KE5 ASSDLPQ------------------------VLSTSTGLTKTVYNPAALKAAQKTLLVST
::::::: :::::::::::::::::::::::::::::
CCDS73 ASSDLPQNVTKLSVKDRLGFVSKPSVSATEKVLSTSTGLTKTVYNPAALKAAQKTLLVST
660 670 680 690 700 710
700 710 720 730 740 750
pF1KE5 SAVDNNEAQKKKQEALKLQQDVRKRKQEILEKHIETQKMLISKLEKNKTMKSEDKAEIMK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 SAVDNNEAQKKKQEALKLQQDVRKRKQEILEKHIETQKMLISKLEKNKTMKSEDKAEIMK
720 730 740 750 760 770
760 770 780 790 800 810
pF1KE5 TLEVLTKNITKLKDEVKAASPGRCLPKSIKTKTQMQKELLDTELDLYKKMQAGEEVTELR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 TLEVLTKNITKLKDEVKAASPGRCLPKSIKTKTQMQKELLDTELDLYKKMQAGEEVTELR
780 790 800 810 820 830
820 830 840 850 860 870
pF1KE5 RKYTELQLEAAKRGILSSGRGRGIHSRGRGAVHGRGRGRGRGRGVPGHAVVDHRPRALEI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 RKYTELQLEAAKRGILSSGRGRGIHSRGRGAVHGRGRGRGRGRGVPGHAVVDHRPRALEI
840 850 860 870 880 890
880 890 900 910 920 930
pF1KE5 SAFTESDREDLLPHFAQYGEIEDCQIDDSSLHAVITFKTRAEAEAAAVHGARFKGQDLKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 SAFTESDREDLLPHFAQYGEIEDCQIDDSSLHAVITFKTRAEAEAAAVHGARFKGQDLKL
900 910 920 930 940 950
940 950 960 970 980
pF1KE5 AWNKPVTNISAVETEEVEPDEEEFQEESLVDDSLLQDDDEEEEDNESRSWRR
::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 AWNKPVTNISAVETEEVEPDEEEFQEESLVDDSLLQDDDEEEEDNESRSWRR
960 970 980 990 1000
>>CCDS43378.1 RBM27 gene_id:54439|Hs108|chr5 (1060 aa)
initn: 2319 init1: 468 opt: 883 Z-score: 371.9 bits: 80.4 E(32554): 2.1e-14
Smith-Waterman score: 2589; 46.6% identity (67.7% similar) in 1021 aa overlap (5-887:1-996)
10 20 30 40 50 60
pF1KE5 MVSKMIIENFEALKSWLSKTLEPICDADPSALAKYVLALVKKDKSEKELKALCIDQLDVF
:.::. .::::::.: :::::::::::::.::.::::::: ::::::.: ::::::
CCDS43 MLIEDVDALKSWLAKLLEPICDADPSALANYVVALVKKDKPEKELKAFCADQLDVF
10 20 30 40 50
70 80 90 100 110
pF1KE5 LQKETQIFVEKLFDAVNTKSYLP--PPEQPSSGSLKVEFFPHQEKDIKKEEITKEEEREK
:::::. ::.:::... ::.::: : .: : :::. :::. .: .:.
CCDS43 LQKETSGFVDKLFESLYTKNYLPLLEPVKPEPKPLV------QEKEEIKEEVFQEPAEEE
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE5 KFSRRLNHSPPQSS-SRYRENRSRDERKKDDRSRKRDYDRNPPRRDSYRDRYNRRRGRSR
. .:. .. ::.. :. : :.: :.:..: .. ::::: : . ::..:. :::::.
CCDS43 RDGRKKKYPSPQKTRSESSERRTR-EKKRED-GKWRDYDRYYERNELYREKYDWRRGRSK
120 130 140 150 160
180 190 200 210 220 230
pF1KE5 SYSRSRSRSWSKERLRERDRDRSRTRSRSRTRSRERDLVKPKYDLDRTDPLENNYTPVSS
: :.::. : :. : : :..::. .:. .. :::. :. .:.: ::..:.:::.
CCDS43 SRSKSRGLSRSRSRSRGRSKDRDPNRN---VEHRERS----KFKSERND-LESSYVPVSA
170 180 190 200 210 220
240 250 260 270 280 290
pF1KE5 VPSISSGHYP--VPTLSSTITVIAPTHHGNNTTESWSEFHEDQVDHNSYVRPPMPKKRCR
: :: .: . .. ::.:::::.::..:::::::...... . ::. : ::.:::
CCDS43 PPPNSSEQYSSGAQSIPSTVTVIAPAHHSENTTESWSNYYNNHSSSNSFGRNLPPKRRCR
230 240 250 260 270 280
300 310 320 330 340 350
pF1KE5 DYDEKGFCMRGDMCPFDHGSDPVVVEDVNLPGMLPFPAQPPVVEGPPPPG-LPPPPPILT
::::.:::. ::.: ::::.::.::..: ::.:.::: :: . ::::: : :: :
CCDS43 DYDERGFCVLGDLCQFDHGNDPLVVDEVALPSMIPFPPPPPGLPPPPPPGMLMPPMPGPG
290 300 310 320 330 340
360 370 380 390 400
pF1KE5 PPPVNLRPPVPPPGPLPPS---LPPVTG---PPP------PLPPL-QPSGMDAPPNSATS
: : : : ::: : :: : ::: : ::. : : ... . .::
CCDS43 PGPGPGPGPGPGPGPGPGHSMRLPVPQGHGQPPPSVVLPIPRPPITQSSLINSRDQPGTS
350 360 370 380 390 400
410 420
pF1KE5 SVPTVVTTGIHHQPP-P-----------------------------APPSLFTA------
.::.....: . :: : .:: :..:
CCDS43 AVPNLASVGTRLPPPLPQNLLYTVSERQPMYSREHGAAASERLQLGTPPPLLAARLVPPR
410 420 430 440 450 460
430 440 450 460
pF1KE5 ---------------------DTYDTDGYNPEAPSITNTSRPMYRH---RVHAQRPNLIG
:::. :::::::::::...: .::. :...:::::::
CCDS43 NLMGSSIGYHTSVSSPTPLVPDTYEPDGYNPEAPSITSSGRSQYRQFFSRTQTQRPNLIG
470 480 490 500 510 520
470 480 490 500
pF1KE5 LTSGDMDLPPRE-------KPP-----NKSSMRIVVDSESRKRTIGSGEPGVPTKKTWFD
:::::::. :: .:: :.. :.:.. .::::.. :: : ::: :.
CCDS43 LTSGDMDVNPRAANIVIQTEPPVPVSINSNITRVVLEPDSRKRAM-SGLEGPLTKKPWLG
530 540 550 560 570
510 520 530 540 550 560
pF1KE5 KPNFNRTNSPGFQKKVQFGNENTKLELRKVPPELNNISKLNEHFSRFGTLVNLQVAYNGD
: . : :.::: .: :. :::::..:.: :::::.:::::::.:::.::.:::..::
CCDS43 KQGNNNQNKPGFLRKNQY--TNTKLEVKKIPQELNNITKLNEHFSKFGTIVNIQVAFKGD
580 590 600 610 620 630
570 580 590 600 610 620
pF1KE5 PEGALIQFATYEEAKKAISSTEAVLNNRFIKVYWHREGSTQQ-LQTTSPKVMQ-------
::.::::. : :::.:::::::::::::::.: ::::.. : ::... ..:
CCDS43 PEAALIQYLTNEEARKAISSTEAVLNNRFIRVLWHRENNEQPTLQSSAQLLLQQQQTLSH
640 650 660 670 680 690
630 640
pF1KE5 --------P--LVQQPIL-----PVV---------------------KQSVKERLGPVPS
: : :: .: : . : ::.::: . .
CCDS43 LSQQHHHLPQHLHQQQVLVAQSAPSTVHGGIQKMMSKPQTSGAYVLNKVPVKHRLGHAGG
700 710 720 730 740 750
650 660 670 680 690 700
pF1KE5 STIEPAE--AQSASSDLP-QVLSTSTGLTKTVYNPAALKAAQKTLLVSTSAVDNNEAQKK
. . .. ::... :..:: : : .:. . ::. .: : .... : .:. ::
CCDS43 NQSDASHLLNQSGGAGEDCQIFSTP-GHPKMIYSSSNLKTPSK-LCSGSKSHDVQEVLKK
760 770 780 790 800 810
710 720 730 740 750 760
pF1KE5 KQEALKLQQDVRKRKQEILEKHIETQKMLISKLEKNKTMKSEDKAEIMKTLEVLTKNITK
::::.:::::.::..::.:::.:: ::::::::::::.:: :..:.:::::. : ..:..
CCDS43 KQEAMKLQQDMRKKRQEVLEKQIECQKMLISKLEKNKNMKPEERANIMKTLKELGEKISQ
820 830 840 850 860 870
770 780 790 800 810 820
pF1KE5 LKDEVKAASPGRCLPKSIKTKTQMQKELLDTELDLYKKMQAGEEVTELRRKYTELQLEAA
::::.:..: . :...::::. :::::::::::.:....::..::::.: ..::.:::
CCDS43 LKDELKTSS-AVSTPSKVKTKTEAQKELLDTELDLHKRLSSGEDTTELRKKLSQLQVEAA
880 890 900 910 920 930
830 840 850 860 870 880
pF1KE5 KRGILSSGRGRGIHSRGRGAVHGRGRGRGRGRGVPGHAVVDHRPRALEISAFTESDREDL
. ::: :::. . :.::: .::::: ::::: .: ::::::.:: ...: : ..:::
CCDS43 RLGILPVGRGKTMSSQGRG--RGRGRG-GRGRGSLNHMVVDHRPKALTVGGFIEEEKEDL
940 950 960 970 980 990
890 900 910 920 930 940
pF1KE5 LPHFAQYGEIEDCQIDDSSLHAVITFKTRAEAEAAAVHGARFKGQDLKLAWNKPVTNISA
: ::.
CCDS43 LQHFSTANQGPKFKDRRLQISWHKPKVPSISTETEEEEVKEEETETSDLFLPDDDDEDED
1000 1010 1020 1030 1040 1050
983 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 06:27:29 2016 done: Tue Nov 8 06:27:30 2016
Total Scan time: 5.070 Total Display time: 0.170
Function used was FASTA [36.3.4 Apr, 2011]