Result of FASTA (ccds) for
pFN21AE5728
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE5728, 926 aa
1>>>pF1KE5728 926 - 926 aa - 926 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.7680+/-0.000947; mu= 8.8276+/- 0.058
mean_var=261.6886+/-53.646, 0's: 0 Z-trim(114.0): 13 B-trim: 49 in 1/54
Lambda= 0.079283
statistics sampled from 14593 (14603) to 14593 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.748), E-opt: 0.2 (0.449), width: 16
Scan time: 4.120
The best scores are: opt bits E(32554)
CCDS10026.1 OTUD7A gene_id:161725|Hs108|chr15 ( 926) 6231 726.6 5.4e-209
CCDS72903.1 OTUD7B gene_id:56957|Hs108|chr1 ( 843) 2156 260.4 1e-68
CCDS5187.1 TNFAIP3 gene_id:7128|Hs108|chr6 ( 790) 555 77.3 1.3e-13
>>CCDS10026.1 OTUD7A gene_id:161725|Hs108|chr15 (926 aa)
initn: 6231 init1: 6231 opt: 6231 Z-score: 3865.6 bits: 726.6 E(32554): 5.4e-209
Smith-Waterman score: 6231; 100.0% identity (100.0% similar) in 926 aa overlap (1-926:1-926)
10 20 30 40 50 60
pF1KE5 MVSSVLPNPTSAECWAALLHDPMTLDMDAVLSDFVRSTGAEPGLARDLLEGKNWDLTAAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 MVSSVLPNPTSAECWAALLHDPMTLDMDAVLSDFVRSTGAEPGLARDLLEGKNWDLTAAL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 SDYEQLRQVHTANLPHVFNEGRGPKQPEREPQPGHKVERPCLQRQDDIAQEKRLSRGISH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 SDYEQLRQVHTANLPHVFNEGRGPKQPEREPQPGHKVERPCLQRQDDIAQEKRLSRGISH
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 ASSAIVSLARSHVASECNNEQFPLEMPIYTFQLPDLSVYSEDFRSFIERDLIEQATMVAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 ASSAIVSLARSHVASECNNEQFPLEMPIYTFQLPDLSVYSEDFRSFIERDLIEQATMVAL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 EQAGRLNWWSTVCTSCKRLLPLATTGDGNCLLHAASLGMWGFHDRDLVLRKALYTMMRTG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 EQAGRLNWWSTVCTSCKRLLPLATTGDGNCLLHAASLGMWGFHDRDLVLRKALYTMMRTG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 AEREALKRRWRWQQTQQNKEEEWEREWTELLKLASSEPRTHFSKNGGTGGGVDNSEDPVY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 AEREALKRRWRWQQTQQNKEEEWEREWTELLKLASSEPRTHFSKNGGTGGGVDNSEDPVY
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE5 ESLEEFHVFVLAHILRRPIVVVADTMLRDSGGEAFAPIPFGGIYLPLEVPPNRCHCSPLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 ESLEEFHVFVLAHILRRPIVVVADTMLRDSGGEAFAPIPFGGIYLPLEVPPNRCHCSPLV
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE5 LAYDQAHFSALVSMEQRDQQREQAVIPLTDSEHKLLPLHFAVDPGKDWEWGKDDNDNARL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 LAYDQAHFSALVSMEQRDQQREQAVIPLTDSEHKLLPLHFAVDPGKDWEWGKDDNDNARL
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE5 AHLILSLEAKLNLLHSYMNVTWIRIPSETRAPLAQPESPTASAGEDVQSLADSLDSDRDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 AHLILSLEAKLNLLHSYMNVTWIRIPSETRAPLAQPESPTASAGEDVQSLADSLDSDRDS
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE5 VCSNSNSNNGKNGKDKEKEKQRKEKDKTRADSVANKLGSFSKTLGIKLKKNMGGLGGLVH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 VCSNSNSNNGKNGKDKEKEKQRKEKDKTRADSVANKLGSFSKTLGIKLKKNMGGLGGLVH
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE5 GKMGRANSANGKNGDSAERGKEKKAKSRKGSKEESGASASTSPSEKTTPSPTDKAAGASP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 GKMGRANSANGKNGDSAERGKEKKAKSRKGSKEESGASASTSPSEKTTPSPTDKAAGASP
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE5 AEKGGGPRGDAWKYSTDVKLSLNILRAAMQGERKFIFAGLLLTSHRHQFHEEMIGYYLTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 AEKGGGPRGDAWKYSTDVKLSLNILRAAMQGERKFIFAGLLLTSHRHQFHEEMIGYYLTS
610 620 630 640 650 660
670 680 690 700 710 720
pF1KE5 AQERFSAEQEQRRRDAATAAAAAAAAAAATAKRPPRRPETEGVPVPERASPGPPTQLVLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 AQERFSAEQEQRRRDAATAAAAAAAAAAATAKRPPRRPETEGVPVPERASPGPPTQLVLK
670 680 690 700 710 720
730 740 750 760 770 780
pF1KE5 LKERPSPGPAAGRAARAAAGGTASPGGGARRASASGPVPGRSPPAPARQSVIHVQASGAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 LKERPSPGPAAGRAARAAAGGTASPGGGARRASASGPVPGRSPPAPARQSVIHVQASGAR
730 740 750 760 770 780
790 800 810 820 830 840
pF1KE5 DEACAPAVGALRPCATYPQQNRSLSSQSYSPARAAALRTVNTVESLARAVPGALPGAAGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 DEACAPAVGALRPCATYPQQNRSLSSQSYSPARAAALRTVNTVESLARAVPGALPGAAGT
790 800 810 820 830 840
850 860 870 880 890 900
pF1KE5 AGAAEHKSQTYTNGFGALRDGLEFADADAPTARSNGECGRGGPGPVQRRCQRENCAFYGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 AGAAEHKSQTYTNGFGALRDGLEFADADAPTARSNGECGRGGPGPVQRRCQRENCAFYGR
850 860 870 880 890 900
910 920
pF1KE5 AETEHYCSYCYREELRRRREARGARP
::::::::::::::::::::::::::
CCDS10 AETEHYCSYCYREELRRRREARGARP
910 920
>>CCDS72903.1 OTUD7B gene_id:56957|Hs108|chr1 (843 aa)
initn: 2011 init1: 1246 opt: 2156 Z-score: 1347.1 bits: 260.4 E(32554): 1e-68
Smith-Waterman score: 3065; 57.6% identity (74.4% similar) in 922 aa overlap (23-923:1-836)
10 20 30 40 50 60
pF1KE5 MVSSVLPNPTSAECWAALLHDPMTLDMDAVLSDFVRSTGAEPGLARDLLEGKNWDLTAAL
:::::::::::::::::::::::::::::::::..:::
CCDS72 MTLDMDAVLSDFVRSTGAEPGLARDLLEGKNWDVNAAL
10 20 30
70 80 90 100 110
pF1KE5 SDYEQLRQVHTANLPHVFNEGRG-PKQPE-----REPQPGHKVERPCLQRQDDIAQEKRL
::.:::::::..::: :.:: : . :: ::: . :: :::::::.:::::
CCDS72 SDFEQLRQVHAGNLPPSFSEGSGGSRTPEKGFSDREPT---RPPRPILQRQDDIVQEKRL
40 50 60 70 80 90
120 130 140 150 160 170
pF1KE5 SRGISHASSAIVSLARSHVASECN---NEQFPLEMPIYTFQLPDLSVYSEDFRSFIERDL
:::::::::.:::::::::.:. . ... :::::: .::::::.::.:::::::::::
CCDS72 SRGISHASSSIVSLARSHVSSNGGGGGSNEHPLEMPICAFQLPDLTVYNEDFRSFIERDL
100 110 120 130 140 150
180 190 200 210 220 230
pF1KE5 IEQATMVALEQAGRLNWWSTVCTSCKRLLPLATTGDGNCLLHAASLGMWGFHDRDLVLRK
:::. .:::::::::::: .: . .::::::::::::::::::::::::::::::.:::
CCDS72 IEQSMLVALEQAGRLNWWVSVDPTSQRLLPLATTGDGNCLLHAASLGMWGFHDRDLMLRK
160 170 180 190 200 210
240 250 260 270 280
pF1KE5 ALYTMMRTGAEREALKRRWRWQQTQQNKE-------EEWEREWTELLKLASSEPRTHFSK
:::..:. :.:.::::::::::::::::: .::..::.::.:::::::: :..
CCDS72 ALYALMEKGVEKEALKRRWRWQQTQQNKESGLVYTEDEWQKEWNELIKLASSEPRMHLGT
220 230 240 250 260 270
290 300 310 320 330 340
pF1KE5 NGGTGGGVDNSEDPVYESLEEFHVFVLAHILRRPIVVVADTMLRDSGGEAFAPIPFGGIY
::.. :::..::.::::::::::::::::.::::::::::::::::::::::::::::::
CCDS72 NGANCGGVESSEEPVYESLEEFHVFVLAHVLRRPIVVVADTMLRDSGGEAFAPIPFGGIY
280 290 300 310 320 330
350 360 370 380 390 400
pF1KE5 LPLEVPPNRCHCSPLVLAYDQAHFSALVSMEQRDQQREQAVIPLTDSEHKLLPLHFAVDP
:::::: ..:: ::::::::::::::::::::... .:::::::::::.:::::::::::
CCDS72 LPLEVPASQCHRSPLVLAYDQAHFSALVSMEQKENTKEQAVIPLTDSEYKLLPLHFAVDP
340 350 360 370 380 390
410 420 430 440 450 460
pF1KE5 GKDWEWGKDDNDNARLAHLILSLEAKLNLLHSYMNVTWIRIPSETRAPLAQPESPTASAG
:: :::::::.::.::: .:::::.::.:::::::: :: . :...::::::::::::::
CCDS72 GKGWEWGKDDSDNVRLASVILSLEVKLHLLHSYMNVKWIPLSSDAQAPLAQPESPTASAG
400 410 420 430 440 450
470 480 490 500 510 520
pF1KE5 EDVQSLADSLDSDRDSVCSNSNSNNGKNGKDKEKEKQRKEKDKTRADSVANKLGSFSKTL
.. .: .: :::..:: :.:.::.: :. ::: :. .:::: ::::::::::::.:::
CCDS72 DEPRSTPESGDSDKESVGSSSTSNEG--GRRKEKSKRDREKDKKRADSVANKLGSFGKTL
460 470 480 490 500 510
530 540 550 560 570 580
pF1KE5 GIKLKKNMGGLGGLVHGKMGRANSA-NGKNG-DSAERGKEKKAKSRKGSKEESGASASTS
: ::::::::: .: : .... .:..: .. :. :... :: ::.::: .:. .
CCDS72 GSKLKKNMGGLMHSKGSKPGGVGTGLGGSSGTETLEKKKKNSLKSWKGGKEE---AAGDG
520 530 540 550 560 570
590 600 610 620 630 640
pF1KE5 P-SEKTTPSPTDKAAGASPAEKGGGPRGDAWKYSTDVKLSLNILRAAMQGERKFIFAGLL
: ::: : ...: .::. ::: .: ::.:::.::::: ::::.: :
CCDS72 PVSEK----PPAESVG-----NGGS------KYSQEVMQSLSILRTAMQGEGKFIFVGTL
580 590 600 610
650 660 670 680 690 700
pF1KE5 LTSHRHQFHEEMIGYYLTSAQERFSAEQEQRRRDAATAAAAAAAAAAATAKRPPRRPETE
.::::..:::: ::..:.::: :::.:.. :.:
CCDS72 KMGHRHQYQEEMIQRYLSDAEERFLAEQKQKE-----------------AERKIMNGGIG
620 630 640 650
710 720 730 740 750 760
pF1KE5 GVPVPERASPGPPTQLVLKLKERPSPGPAAGRAARAAAGGTASPGGGARRASASGPVPGR
: : : . .: : .. .:.:. :: : .:: : .:. ::
CCDS72 GGPPPAK-KPEPDAR-----EEQPT-GPPA--ESRAMAFSTGYPGD-------------F
660 670 680 690
770 780 790 800 810 820
pF1KE5 SPPAPARQSVIHVQASGARDEACAPAVGALRPCATYPQQNRSLSSQSYSPARAAALR-TV
. : :. .: : : :. : .: ::.: : ::.:.: :.: . ..
CCDS72 TIPRPSGGGV-HCQEP-RRQLAGGPCVGGLPPYATFPRQC--------PPGRPYPHQDSI
700 710 720 730 740
830 840 850 860 870 880
pF1KE5 NTVESLARAVPGALPGAAGTAGAAEHKSQTYTNGFGALRDGLEFADADAPTARSNGECGR
..: ... : :: . ...:.::. :. : : . ..: :
CCDS72 PSLEPGSHSKDGLHRGA--LLPPPYRVADSYSNGY---REPPE------PDGWAGGL--R
750 760 770 780 790
890 900 910 920
pF1KE5 GGPGPVQRRCQRENCAFYGRAETEHYCSYCYREELRRR-REARGARP
: : :.: .:.. ::.:::. ::...:: ::::::::: :: :
CCDS72 GLP-PTQTKCKQPNCSFYGHPETNNFCSCCYREELRRREREPDGELLVHRF
800 810 820 830 840
>>CCDS5187.1 TNFAIP3 gene_id:7128|Hs108|chr6 (790 aa)
initn: 531 init1: 162 opt: 555 Z-score: 357.7 bits: 77.3 E(32554): 1.3e-13
Smith-Waterman score: 593; 37.9% identity (65.4% similar) in 272 aa overlap (146-404:43-294)
120 130 140 150 160 170
pF1KE5 RGISHASSAIVSLARSHVASECNNEQFPLEMPIYTFQLPDLSVYSEDFRSFIERDLIEQA
: ::... . .:: .:.. ::..
CCDS51 SNMRKAVKIRERTPEDIFKPTNGIIHHFKTMHRYTLEMFRTCQFCPQFREIIHKALIDRN
20 30 40 50 60 70
180 190 200 210 220 230
pF1KE5 TMVALEQAGRLNWWSTVCTSCKRLLPLATTGDGNCLLHAASLGMWGFHDRDLVLRKALYT
...::. .::: : ..:. : :.::::::.::.: ::: .: ::::::::..
CCDS51 IQATLESQKKLNW----CREVRKLVALKTNGDGNCLMHATSQYMWGVQDTDLVLRKALFS
80 90 100 110 120
240 250 260 270 280
pF1KE5 MMRTGAEREALKRRWRWQQTQQNKEEE---------WEREWTELLKLASSEPRTHFSKNG
.. :. .: ::. .. .... : :. :: .:.:.::.. : ....:
CCDS51 TLKETDTRN-FKFRWQLESLKSQEFVETGLCYDTRNWNDEWDNLIKMASTD--TPMARSG
130 140 150 160 170 180
290 300 310 320 330 340
pF1KE5 GTGGGVDNSEDPVYESLEEFHVFVLAHILRRPIVVVADTMLRD-SGGEAFAPIPFGGIYL
:.::::.:.::: .::::::.:..: :::. .: :::. :::::
CCDS51 LQ-----------YNSLEEIHIFVLCNILRRPIIVISDKMLRSLESGSNFAPLKVGGIYL
190 200 210 220 230
350 360 370 380 390 400
pF1KE5 PLEVPPNRCHCSPLVLAYDQAHFSALVSMEQRDQQREQAVIPLTDSEH---KLLPLHFAV
::. : ..:. :.::.::. :: ::.. .:. : ..::.. .. . : .:: .
CCDS51 PLHWPAQECYRYPIVLGYDSHHFVPLVTL--KDSGPEIRAVPLVNRDRGRFEDLKVHFLT
240 250 260 270 280 290
410 420 430 440 450 460
pF1KE5 DPGKDWEWGKDDNDNARLAHLILSLEAKLNLLHSYMNVTWIRIPSETRAPLAQPESPTAS
::
CCDS51 DPENEMKEKLLKEYLMVIEIPVQGWDHGTTHLINAAKLDEANLPKEINLVDDYFELVQHE
300 310 320 330 340 350
926 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 06:08:06 2016 done: Tue Nov 8 06:08:06 2016
Total Scan time: 4.120 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]