Result of FASTA (omim) for
pFN21AE5716
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE5716, 607 aa
1>>>pF1KE5716 607 - 607 aa - 607 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.3935+/-0.000332; mu= 10.3599+/- 0.021
mean_var=155.2564+/-30.785, 0's: 0 Z-trim(119.8): 28 B-trim: 0 in 0/56
Lambda= 0.102932
statistics sampled from 34202 (34230) to 34202 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.74), E-opt: 0.2 (0.401), width: 16
Scan time: 9.270
The best scores are: opt bits E(85289)
NP_005266 (OMIM: 143024) guanine nucleotide-bindin ( 607) 4131 625.5 1.6e-178
XP_005249072 (OMIM: 143024) PREDICTED: guanine nuc ( 607) 4131 625.5 1.6e-178
XP_016862285 (OMIM: 610780) PREDICTED: large subun ( 500) 426 75.3 5.7e-13
NP_060855 (OMIM: 610780) large subunit GTPase 1 ho ( 658) 426 75.4 7.1e-13
NP_001310553 (OMIM: 609365) nucleolar GTP-binding ( 548) 262 50.9 1.3e-05
NP_037417 (OMIM: 609365) nucleolar GTP-binding pro ( 731) 262 51.0 1.6e-05
NP_001310552 (OMIM: 609365) nucleolar GTP-binding ( 799) 262 51.1 1.8e-05
>>NP_005266 (OMIM: 143024) guanine nucleotide-binding pr (607 aa)
initn: 4131 init1: 4131 opt: 4131 Z-score: 3326.1 bits: 625.5 E(85289): 1.6e-178
Smith-Waterman score: 4131; 100.0% identity (100.0% similar) in 607 aa overlap (1-607:1-607)
10 20 30 40 50 60
pF1KE5 MPRKKPFSVKQKKKQLQDKRERKRGLQDGLRSSSNSRSGSRERREEQTDTSDGESVTHHI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MPRKKPFSVKQKKKQLQDKRERKRGLQDGLRSSSNSRSGSRERREEQTDTSDGESVTHHI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 RRLNQQPSQGLGPRGYDPNRYRLHFERDSREEVERRKRAAREQVLQPVSAELLELDIREV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 RRLNQQPSQGLGPRGYDPNRYRLHFERDSREEVERRKRAAREQVLQPVSAELLELDIREV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 YQPGSVLDFPRRPPWSYEMSKEQLMSQEERSFQDYLGKIHGAYSSEKLSYFEHNLETWRQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 YQPGSVLDFPRRPPWSYEMSKEQLMSQEERSFQDYLGKIHGAYSSEKLSYFEHNLETWRQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 LWRVLEMSDIVLLITDIRHPVVNFPPALYEYVTGELGLALVLVLNKVDLAPPALVVAWKH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 LWRVLEMSDIVLLITDIRHPVVNFPPALYEYVTGELGLALVLVLNKVDLAPPALVVAWKH
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 YFHQHYPQLHVVLFTSFPRDPRTPQDPSSVLKKSRRRGRGWTRALGPEQLLRACEAITVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 YFHQHYPQLHVVLFTSFPRDPRTPQDPSSVLKKSRRRGRGWTRALGPEQLLRACEAITVG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE5 KVDLSSWREKIARDVAGATWGNGSGEEEEEEDGPAVLVEQQTDSAMEPTGPTQERYKDGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 KVDLSSWREKIARDVAGATWGNGSGEEEEEEDGPAVLVEQQTDSAMEPTGPTQERYKDGV
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE5 VTIGCVGFPNVGKSSLINGLVGRKVVSVSRTPGHTRYFQTYFLTPSVKLCDCPGLIFPSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 VTIGCVGFPNVGKSSLINGLVGRKVVSVSRTPGHTRYFQTYFLTPSVKLCDCPGLIFPSL
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE5 LPRQLQVLAGIYPIAQIQEPYTAVGYLASRIPVQALLHLRHPEAEDPSAEHPWCAWDICE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 LPRQLQVLAGIYPIAQIQEPYTAVGYLASRIPVQALLHLRHPEAEDPSAEHPWCAWDICE
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE5 AWAEKRGYKTAKAARNDVYRAANSLLRLAVDGRLSLCFHPPGYSEQKGTWESHPETTELV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 AWAEKRGYKTAKAARNDVYRAANSLLRLAVDGRLSLCFHPPGYSEQKGTWESHPETTELV
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE5 VLQGRVGPAGDEEEEEEEELSSSCEEEGEEDRDADEEGEGDEETPTSAPGSSLAGRNPYA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 VLQGRVGPAGDEEEEEEEELSSSCEEEGEEDRDADEEGEGDEETPTSAPGSSLAGRNPYA
550 560 570 580 590 600
pF1KE5 LLGEDEC
:::::::
NP_005 LLGEDEC
>>XP_005249072 (OMIM: 143024) PREDICTED: guanine nucleot (607 aa)
initn: 4131 init1: 4131 opt: 4131 Z-score: 3326.1 bits: 625.5 E(85289): 1.6e-178
Smith-Waterman score: 4131; 100.0% identity (100.0% similar) in 607 aa overlap (1-607:1-607)
10 20 30 40 50 60
pF1KE5 MPRKKPFSVKQKKKQLQDKRERKRGLQDGLRSSSNSRSGSRERREEQTDTSDGESVTHHI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MPRKKPFSVKQKKKQLQDKRERKRGLQDGLRSSSNSRSGSRERREEQTDTSDGESVTHHI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 RRLNQQPSQGLGPRGYDPNRYRLHFERDSREEVERRKRAAREQVLQPVSAELLELDIREV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RRLNQQPSQGLGPRGYDPNRYRLHFERDSREEVERRKRAAREQVLQPVSAELLELDIREV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 YQPGSVLDFPRRPPWSYEMSKEQLMSQEERSFQDYLGKIHGAYSSEKLSYFEHNLETWRQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 YQPGSVLDFPRRPPWSYEMSKEQLMSQEERSFQDYLGKIHGAYSSEKLSYFEHNLETWRQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 LWRVLEMSDIVLLITDIRHPVVNFPPALYEYVTGELGLALVLVLNKVDLAPPALVVAWKH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LWRVLEMSDIVLLITDIRHPVVNFPPALYEYVTGELGLALVLVLNKVDLAPPALVVAWKH
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 YFHQHYPQLHVVLFTSFPRDPRTPQDPSSVLKKSRRRGRGWTRALGPEQLLRACEAITVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 YFHQHYPQLHVVLFTSFPRDPRTPQDPSSVLKKSRRRGRGWTRALGPEQLLRACEAITVG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE5 KVDLSSWREKIARDVAGATWGNGSGEEEEEEDGPAVLVEQQTDSAMEPTGPTQERYKDGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KVDLSSWREKIARDVAGATWGNGSGEEEEEEDGPAVLVEQQTDSAMEPTGPTQERYKDGV
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE5 VTIGCVGFPNVGKSSLINGLVGRKVVSVSRTPGHTRYFQTYFLTPSVKLCDCPGLIFPSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VTIGCVGFPNVGKSSLINGLVGRKVVSVSRTPGHTRYFQTYFLTPSVKLCDCPGLIFPSL
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE5 LPRQLQVLAGIYPIAQIQEPYTAVGYLASRIPVQALLHLRHPEAEDPSAEHPWCAWDICE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LPRQLQVLAGIYPIAQIQEPYTAVGYLASRIPVQALLHLRHPEAEDPSAEHPWCAWDICE
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE5 AWAEKRGYKTAKAARNDVYRAANSLLRLAVDGRLSLCFHPPGYSEQKGTWESHPETTELV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AWAEKRGYKTAKAARNDVYRAANSLLRLAVDGRLSLCFHPPGYSEQKGTWESHPETTELV
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE5 VLQGRVGPAGDEEEEEEEELSSSCEEEGEEDRDADEEGEGDEETPTSAPGSSLAGRNPYA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VLQGRVGPAGDEEEEEEEELSSSCEEEGEEDRDADEEGEGDEETPTSAPGSSLAGRNPYA
550 560 570 580 590 600
pF1KE5 LLGEDEC
:::::::
XP_005 LLGEDEC
>>XP_016862285 (OMIM: 610780) PREDICTED: large subunit G (500 aa)
initn: 447 init1: 302 opt: 426 Z-score: 353.8 bits: 75.3 E(85289): 5.7e-13
Smith-Waterman score: 448; 29.5% identity (53.6% similar) in 386 aa overlap (188-522:16-394)
160 170 180 190 200 210
pF1KE5 KIHGAYSSEKLSYFEHNLETWRQLWRVLEMSDIVLLITDIRHPVVNFPPALYEYVTG-EL
.:::. :.: :.:.. : :: .
XP_016 MEEVGLAIPASAGQPNDIVVQIVDARNPLLFRCEDLECYVKEMDA
10 20 30 40
220 230 240 250 260 270
pF1KE5 GLALVLVLNKVDLAPPALVVAWKHYFHQHYPQLHVVLFTSFPRDPRTPQDPSSVLKKSRR
. :...::.:: :: ::... ...:...... : . .: . .:
XP_016 NKENVILINKADLLTAEQRSAWAMYFEKE--DVKVIFWSALA--GAIPLNGDSEEEANRD
50 60 70 80 90 100
280 290 300 310 320
pF1KE5 RGRGWTRALGPEQLLRA----CEAITVGKVDLSSWREKIARDVAGATWGNGSGEEEE---
.. : .: .. .: :. . : : :. . : . . . :::.
XP_016 DRQSNTTKFGHSSFDQAEISHSESEHLPARDSPSLSENPTTDEDDSEYEDCPEEEEDDWQ
110 120 130 140 150 160
330 340 350
pF1KE5 ---EEDGP---------------------------------AVLVEQQTDSAMEPTGPTQ
::::: . :: .: . :
XP_016 TCSEEDGPKEEDCSQDWKESSTADSEARSRKTPQKRQIHNFSHLVSKQELLELFKELHTG
170 180 190 200 210 220
360 370 380 390 400 410
pF1KE5 ERYKDGVVTIGCVGFPNVGKSSLINGLVGRKVVSVSRTPGHTRYFQTYFLTPSVKLCDCP
.. ::: .:.: ::.::::::: :: ..: : :::: :::::..::: .. :.. :::::
XP_016 RKVKDGQLTVGLVGYPNVGKSSTINTIMGNKKVSVSATPGHTKHFQTLYVEPGLCLCDCP
230 240 250 260 270 280
420 430 440 450 460
pF1KE5 GLIFPSLLPRQLQVL-AGIYPIAQIQEPYTAVGYLASRIPVQAL-----LHLRHP-EAED
::..::.. . .. .:: :: :... :. . . :: ..: ... : : ::
XP_016 GLVMPSFVSTKAEMTCSGILPIDQMRDHVPPVSLVCQNIPRHVLEATYGINIITPREDED
290 300 310 320 330 340
470 480 490 500 510 520
pF1KE5 PSAEHPWCAWDICEAWAEKRGYKTAKAARNDVYRAANSLLRLAVDGRLSLCFHPPGYSEQ
: ..: . .. :.. ::. ::.. . : :.: .:. :.:.: : :::
XP_016 P--HRPPTSEELLTAYGYMRGFMTAHG-QPDQPRSARYILKDYVSGKLLYCHPPPGRDPV
350 360 370 380 390
530 540 550 560 570 580
pF1KE5 KGTWESHPETTELVVLQGRVGPAGDEEEEEEEELSSSCEEEGEEDRDADEEGEGDEETPT
XP_016 TFQHQHQRLLENKMNSDEIKMQLGRNKKAKQIENIVDKTFFHQENVRALTKGVQAVMGYK
400 410 420 430 440 450
>>NP_060855 (OMIM: 610780) large subunit GTPase 1 homolo (658 aa)
initn: 559 init1: 302 opt: 426 Z-score: 352.2 bits: 75.4 E(85289): 7.1e-13
Smith-Waterman score: 602; 31.0% identity (55.2% similar) in 449 aa overlap (127-522:111-552)
100 110 120 130 140 150
pF1KE5 KRAAREQVLQPVSAELLELDIREVYQPGSVLDFPRRPPWSYEMSKEQLMSQEERSFQDYL
: .:::: :. . . :.: . :. .: ..
NP_060 KFVPAEARTGLLSFEESQRIKKLHEENKQFLCIPRRPNWNQNTTPEELKQAEKDNFLEWR
90 100 110 120 130 140
160 170 180 190 200 210
pF1KE5 GKIHGAYSSEKL--SYFEHNLETWRQLWRVLEMSDIVLLITDIRHPVVNFPPALYEYVTG
.. .:: . ::.::. :::::::.: ::::. :.: :.:.. : ::
NP_060 RQLVRLEEEQKLILTPFERNLDFWRQLWRVIERSDIVVQIVDARNPLLFRCEDLECYVKE
150 160 170 180 190 200
220 230 240 250 260 270
pF1KE5 -ELGLALVLVLNKVDLAPPALVVAWKHYFHQHYPQLHVVLFTSFPRDPRTPQDPSSVLKK
. . :...::.:: :: ::... ...:...... : . .: .
NP_060 MDANKENVILINKADLLTAEQRSAWAMYFEKE--DVKVIFWSALA--GAIPLNGDSEEEA
210 220 230 240 250
280 290 300 310 320
pF1KE5 SRRRGRGWTRALGPEQLLRA----CEAITVGKVDLSSWREKIARDVAGATWGNGSGEEEE
.: .. : .: .. .: :. . : : :. . : . . . :::.
NP_060 NRDDRQSNTTKFGHSSFDQAEISHSESEHLPARDSPSLSENPTTDEDDSEYEDCPEEEED
260 270 280 290 300 310
330 340 350
pF1KE5 ------EEDGP---------------------------------AVLVEQQTDSAMEPTG
::::: . :: .: .
NP_060 DWQTCSEEDGPKEEDCSQDWKESSTADSEARSRKTPQKRQIHNFSHLVSKQELLELFKEL
320 330 340 350 360 370
360 370 380 390 400 410
pF1KE5 PTQERYKDGVVTIGCVGFPNVGKSSLINGLVGRKVVSVSRTPGHTRYFQTYFLTPSVKLC
: .. ::: .:.: ::.::::::: :: ..: : :::: :::::..::: .. :.. ::
NP_060 HTGRKVKDGQLTVGLVGYPNVGKSSTINTIMGNKKVSVSATPGHTKHFQTLYVEPGLCLC
380 390 400 410 420 430
420 430 440 450 460
pF1KE5 DCPGLIFPSLLPRQLQVL-AGIYPIAQIQEPYTAVGYLASRIPVQAL-----LHLRHP-E
:::::..::.. . .. .:: :: :... :. . . :: ..: ... : :
NP_060 DCPGLVMPSFVSTKAEMTCSGILPIDQMRDHVPPVSLVCQNIPRHVLEATYGINIITPRE
440 450 460 470 480 490
470 480 490 500 510 520
pF1KE5 AEDPSAEHPWCAWDICEAWAEKRGYKTAKAARNDVYRAANSLLRLAVDGRLSLCFHPPGY
::: ..: . .. :.. ::. ::.. . : :.: .:. :.:.: : :::
NP_060 DEDP--HRPPTSEELLTAYGYMRGFMTAHG-QPDQPRSARYILKDYVSGKLLYCHPPPGR
500 510 520 530 540 550
530 540 550 560 570 580
pF1KE5 SEQKGTWESHPETTELVVLQGRVGPAGDEEEEEEEELSSSCEEEGEEDRDADEEGEGDEE
NP_060 DPVTFQHQHQRLLENKMNSDEIKMQLGRNKKAKQIENIVDKTFFHQENVRALTKGVQAVM
560 570 580 590 600 610
>>NP_001310553 (OMIM: 609365) nucleolar GTP-binding prot (548 aa)
initn: 426 init1: 224 opt: 262 Z-score: 221.7 bits: 50.9 E(85289): 1.3e-05
Smith-Waterman score: 283; 25.4% identity (45.5% similar) in 409 aa overlap (178-579:24-338)
150 160 170 180 190 200
pF1KE5 EERSFQDYLGKIHGAYSSEKLSYFEHNLETWRQLWRVLEMSDIVLLITDIRHPVVNFPPA
: .:..:.. ::.:. . : : :. . :
NP_001 MIESGLINEAQEEIYKKGQSKRIWGELYKVIDSSDVVVQVLDARDPMGTRSPH
10 20 30 40 50
210 220 230 240 250 260
pF1KE5 LYEYVTGELGLA-LVLVLNKVDLAPPALVVAWKHYFHQHYPQL--HVVLFTSFPRDPRTP
. :. : :..:::: ::.: . : . : :: : :. : . :
NP_001 IETYLKKEKPWKHLIFVLNKCDLVPTWATKRWVAVLSQDYPTLAFHASLTNPF-------
60 70 80 90 100
270 280 290 300 310 320
pF1KE5 QDPSSVLKKSRRRGRGWTRALGPEQLLRACEAITVGKVDLSSWREKIARDVAGATWGNGS
:.: :. :::: ::.
NP_001 -------------GKG---AFI--QLLRQ-----FGKL----------------------
110 120
330 340 350 360 370 380
pF1KE5 GEEEEEEDGPAVLVEQQTDSAMEPTGPTQERYKDGVVTIGCVGFPNVGKSSLINGLVGRK
.::. . ...: .:.:::::::.:: : ..:
NP_001 ----------------HTDKKQ--------------ISVGFIGYPNVGKSSVINTLRSKK
130 140 150
390 400 410 420 430 440
pF1KE5 VVSVSRTPGHTRYFQTYFLTPSVKLCDCPGLIFPSLLPRQLQVLAGIYPIAQIQEPYTAV
: .:. :.:. .: : . : ::::...:: . :: :. . .:. : .
NP_001 VCNVAPIAGETKVWQYITLMRRIFLIDCPGVVYPSEDSETDIVLKGVVQVEKIKSPEDHI
160 170 180 190 200 210
450 460 470 480 490 500
pF1KE5 GYLASRIPVQALLHLRHPEAEDPSAEHPWCAWDICEAWAEKRGYKTAKAARN---DVYRA
: :.:. .:: : . .:. : . :: ...:.: .. :. .
NP_001 G---------AVLERAKPEY--ISKTYKIDSWENAEDFLEKLAFRTGKLLKGGEPDLQTV
220 230 240 250 260
510 520 530 540 550 560
pF1KE5 ANSLLRLAVDGRLSLCFHPPGYSEQKGTWESHPETTELVVLQGRVGPAGDEEEEEEEELS
.. .: ::. . .::. .: . . : .. :: .. . :.: : : :
NP_001 GKMVLNDWQRGRIPFFVKPPN-AEPLVAPQLLPSSSLEVVPEAAQNNPGEEVTETAGEGS
270 280 290 300 310
570 580 590 600
pF1KE5 SSC-EEEGEEDRDADEEGEGDEETPTSAPGSSLAGRNPYALLGEDEC
: .:: ::. : . :
NP_001 ESIIKEETEENSHCDANTEMQQILTRVRQNFGKINVVPQFSGDDLVPVEVSDLEEELESF
320 330 340 350 360 370
>>NP_037417 (OMIM: 609365) nucleolar GTP-binding protein (731 aa)
initn: 389 init1: 224 opt: 262 Z-score: 219.9 bits: 51.0 E(85289): 1.6e-05
Smith-Waterman score: 286; 24.6% identity (45.9% similar) in 451 aa overlap (138-579:168-521)
110 120 130 140 150 160
pF1KE5 VSAELLELDIREVYQPGSVLDFPRRPPWSYEMSKEQLMSQEERSFQDYLGKIHGAYSSEK
::: :. . ..: : . . :. . .
NP_037 ESFETTFGPKSQRKRPNLFASDMQSLIENAEMSTESYDQGKDR---DLVTEDTGVRNEAQ
140 150 160 170 180 190
170 180 190 200 210 220
pF1KE5 LSYFE--HNLETWRQLWRVLEMSDIVLLITDIRHPVVNFPPALYEYVTGELGLA-LVLVL
.. .. . : .:..:.. ::.:. . : : :. . : . :. : :..::
NP_037 EEIYKKGQSKRIWGELYKVIDSSDVVVQVLDARDPMGTRSPHIETYLKKEKPWKHLIFVL
200 210 220 230 240 250
230 240 250 260 270 280
pF1KE5 NKVDLAPPALVVAWKHYFHQHYPQL--HVVLFTSFPRDPRTPQDPSSVLKKSRRRGRGWT
:: ::.: . : . : :: : :. : . : :.:
NP_037 NKCDLVPTWATKRWVAVLSQDYPTLAFHASLTNPF--------------------GKG--
260 270 280 290
290 300 310 320 330 340
pF1KE5 RALGPEQLLRACEAITVGKVDLSSWREKIARDVAGATWGNGSGEEEEEEDGPAVLVEQQT
:. :::: ::. .:
NP_037 -AFI--QLLRQ-----FGKL--------------------------------------HT
300
350 360 370 380 390 400
pF1KE5 DSAMEPTGPTQERYKDGVVTIGCVGFPNVGKSSLINGLVGRKVVSVSRTPGHTRYFQTYF
:. . ...: .:.:::::::.:: : ..:: .:. :.:. .:
NP_037 DKKQ--------------ISVGFIGYPNVGKSSVINTLRSKKVCNVAPIAGETKVWQYIT
310 320 330 340 350
410 420 430 440 450 460
pF1KE5 LTPSVKLCDCPGLIFPSLLPRQLQVLAGIYPIAQIQEPYTAVGYLASRIPVQALLHLRHP
: . : ::::...:: . :: :. . .:. : .: :.:. .:
NP_037 LMRRIFLIDCPGVVYPSEDSETDIVLKGVVQVEKIKSPEDHIG---------AVLERAKP
360 370 380 390 400
470 480 490 500 510
pF1KE5 EAEDPSAEHPWCAWDICEAWAEKRGYKTAKAARN---DVYRAANSLLRLAVDGRLSLCFH
: : . .:. : . :: ...:.: .. :. ... .: ::. . .
NP_037 EY--ISKTYKIDSWENAEDFLEKLAFRTGKLLKGGEPDLQTVGKMVLNDWQRGRIPFFVK
410 420 430 440 450 460
520 530 540 550 560 570
pF1KE5 PPGYSEQKGTWESHPETTELVVLQGRVGPAGDEEEEEEEELSSSC-EEEGEEDRDADEEG
::. .: . . : .. :: .. . :.: : : : : .:: ::. : .
NP_037 PPN-AEPLVAPQLLPSSSLEVVPEAAQNNPGEEVTETAGEGSESIIKEETEENSHCDANT
470 480 490 500 510 520
580 590 600
pF1KE5 EGDEETPTSAPGSSLAGRNPYALLGEDEC
:
NP_037 EMQQILTRVRQNFGKINVVPQFSGDDLVPVEVSDLEEELESFSDEEEEEQEQQRDDAEES
530 540 550 560 570 580
>>NP_001310552 (OMIM: 609365) nucleolar GTP-binding prot (799 aa)
initn: 389 init1: 224 opt: 262 Z-score: 219.4 bits: 51.1 E(85289): 1.8e-05
Smith-Waterman score: 387; 25.8% identity (48.9% similar) in 454 aa overlap (138-579:168-589)
110 120 130 140 150 160
pF1KE5 VSAELLELDIREVYQPGSVLDFPRRPPWSYEMSKEQLMSQEERSFQDYLGKIHGAYSSEK
::: :. . ..: : . . :. . .
NP_001 ESFETTFGPKSQRKRPNLFASDMQSLIENAEMSTESYDQGKDR---DLVTEDTGVRNEAQ
140 150 160 170 180 190
170 180 190 200 210 220
pF1KE5 LSYFE--HNLETWRQLWRVLEMSDIVLLITDIRHPVVNFPPALYEYVTGELGLA-LVLVL
.. .. . : .:..:.. ::.:. . : : :. . : . :. : :..::
NP_001 EEIYKKGQSKRIWGELYKVIDSSDVVVQVLDARDPMGTRSPHIETYLKKEKPWKHLIFVL
200 210 220 230 240 250
230 240 250 260 270 280
pF1KE5 NKVDLAPPALVVAWKHYFHQHYPQLHVVLFTSFPRDPRTPQDPSSVLKKSRRRGRGWTRA
:: ::.: . : . : :: : .: . .: .. .. :. :. : .
NP_001 NKCDLVPTWATKRWVAVLSQDYPTL------AFHASLTNPFGKGAFIQLLRQFGKPWHLT
260 270 280 290 300
290 300 310 320 330
pF1KE5 ----LG-PEQLLRACEAITVGKVDLSSWREKIARDVAGATWGNGSGEEEEEEDGPAVLVE
:: : : : . : : :. :. :. : . : . .
NP_001 FHALLGFPGLLCILCPWSPCSFYVL--WLERALPKFKLQIPGQTSAPEGSR--GTRLPYQ
310 320 330 340 350 360
340 350 360 370 380 390
pF1KE5 QQTDSAMEPTGPTQERYKDGVVTIGCVGFPNVGKSSLINGLVGRKVVSVSRTPGHTRYFQ
: : : ...: .:.:::::::.:: : ..:: .:. :.:. .:
NP_001 ILKASCSLHTDKKQ-------ISVGFIGYPNVGKSSVINTLRSKKVCNVAPIAGETKVWQ
370 380 390 400 410
400 410 420 430 440 450
pF1KE5 TYFLTPSVKLCDCPGLIFPSLLPRQLQVLAGIYPIAQIQEPYTAVGYLASRIPVQALLHL
: . : ::::...:: . :: :. . .:. : .: :.:.
NP_001 YITLMRRIFLIDCPGVVYPSEDSETDIVLKGVVQVEKIKSPEDHIG---------AVLER
420 430 440 450 460
460 470 480 490 500 510
pF1KE5 RHPEAEDPSAEHPWCAWDICEAWAEKRGYKTAKAARN---DVYRAANSLLRLAVDGRLSL
.:: : . .:. : . :: ...:.: .. :. ... .: ::. .
NP_001 AKPEY--ISKTYKIDSWENAEDFLEKLAFRTGKLLKGGEPDLQTVGKMVLNDWQRGRIPF
470 480 490 500 510 520
520 530 540 550 560 570
pF1KE5 CFHPPGYSEQKGTWESHPETTELVVLQGRVGPAGDEEEEEEEELSSSC-EEEGEEDRDAD
.::. .: . . : .. :: .. . :.: : : : : .:: ::. :
NP_001 FVKPPN-AEPLVAPQLLPSSSLEVVPEAAQNNPGEEVTETAGEGSESIIKEETEENSHCD
530 540 550 560 570 580
580 590 600
pF1KE5 EEGEGDEETPTSAPGSSLAGRNPYALLGEDEC
. :
NP_001 ANTEMQQILTRVRQNFGKINVVPQFSGDDLVPVEVSDLEEELESFSDEEEEEQEQQRDDA
590 600 610 620 630 640
607 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 06:01:00 2016 done: Tue Nov 8 06:01:01 2016
Total Scan time: 9.270 Total Display time: 0.070
Function used was FASTA [36.3.4 Apr, 2011]