Result of FASTA (omim) for
pFN21AE5708
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE5708, 737 aa
1>>>pF1KE5708 737 - 737 aa - 737 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.6384+/-0.000519; mu= 10.5741+/- 0.032
mean_var=183.0478+/-36.512, 0's: 0 Z-trim(114.0): 157 B-trim: 673 in 1/54
Lambda= 0.094796
statistics sampled from 23503 (23664) to 23503 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.624), E-opt: 0.2 (0.277), width: 16
Scan time: 8.230
The best scores are: opt bits E(85289)
NP_076950 (OMIM: 610373) ATP-dependent RNA helicas ( 737) 4835 674.6 3.8e-193
XP_016872115 (OMIM: 610373) PREDICTED: ATP-depende ( 737) 4835 674.6 3.8e-193
XP_016872117 (OMIM: 610373) PREDICTED: ATP-depende ( 672) 4403 615.5 2.2e-175
XP_011538446 (OMIM: 610373) PREDICTED: ATP-depende ( 672) 4403 615.5 2.2e-175
XP_005270205 (OMIM: 610373) PREDICTED: ATP-depende ( 672) 4403 615.5 2.2e-175
XP_016872116 (OMIM: 610373) PREDICTED: ATP-depende ( 672) 4403 615.5 2.2e-175
XP_016872118 (OMIM: 610373) PREDICTED: ATP-depende ( 672) 4403 615.5 2.2e-175
XP_016872119 (OMIM: 610373) PREDICTED: ATP-depende ( 443) 2934 414.4 4.8e-115
NP_004719 (OMIM: 606357) nucleolar RNA helicase 2 ( 783) 2676 379.4 3.1e-104
NP_001243839 (OMIM: 606357) nucleolar RNA helicase ( 715) 2675 379.2 3.1e-104
XP_011538638 (OMIM: 606357) PREDICTED: nucleolar R ( 729) 1493 217.6 1.5e-55
XP_016872399 (OMIM: 606357) PREDICTED: nucleolar R ( 661) 1492 217.4 1.5e-55
NP_006377 (OMIM: 608469) probable ATP-dependent RN ( 729) 731 113.4 3.4e-24
NP_001091974 (OMIM: 608469) probable ATP-dependent ( 731) 731 113.4 3.4e-24
XP_011534229 (OMIM: 606286) PREDICTED: probable AT ( 529) 699 108.9 5.7e-23
XP_011534230 (OMIM: 606286) PREDICTED: probable AT ( 529) 699 108.9 5.7e-23
NP_061135 (OMIM: 606286) probable ATP-dependent RN ( 648) 699 108.9 6.6e-23
NP_001307524 (OMIM: 180630) probable ATP-dependent ( 614) 696 108.5 8.4e-23
NP_001307525 (OMIM: 180630) probable ATP-dependent ( 614) 696 108.5 8.4e-23
NP_004387 (OMIM: 180630) probable ATP-dependent RN ( 614) 696 108.5 8.4e-23
NP_001307526 (OMIM: 180630) probable ATP-dependent ( 614) 693 108.1 1.1e-22
XP_016866492 (OMIM: 606286) PREDICTED: probable AT ( 439) 688 107.3 1.4e-22
XP_011534228 (OMIM: 606286) PREDICTED: probable AT ( 604) 688 107.4 1.8e-22
NP_001160006 (OMIM: 605281) probable ATP-dependent ( 575) 674 105.5 6.4e-22
XP_011541799 (OMIM: 605281) PREDICTED: probable AT ( 678) 674 105.5 7.3e-22
NP_001136021 (OMIM: 605281) probable ATP-dependent ( 690) 674 105.5 7.3e-22
XP_011541797 (OMIM: 605281) PREDICTED: probable AT ( 698) 674 105.5 7.4e-22
NP_001160005 (OMIM: 605281) probable ATP-dependent ( 704) 674 105.5 7.5e-22
NP_077726 (OMIM: 605281) probable ATP-dependent RN ( 724) 674 105.6 7.6e-22
NP_031398 (OMIM: 613369) ATP-dependent RNA helicas ( 938) 667 104.7 1.8e-21
XP_006721720 (OMIM: 613369) PREDICTED: ATP-depende ( 938) 667 104.7 1.8e-21
NP_987095 (OMIM: 613369) ATP-dependent RNA helicas ( 938) 667 104.7 1.8e-21
XP_016879600 (OMIM: 613369) PREDICTED: ATP-depende ( 938) 667 104.7 1.8e-21
XP_016879601 (OMIM: 613369) PREDICTED: ATP-depende ( 775) 655 103.0 4.8e-21
NP_060365 (OMIM: 616621) probable ATP-dependent RN ( 796) 654 102.9 5.4e-21
NP_006764 (OMIM: 606355) ATP-dependent RNA helicas ( 670) 642 101.2 1.5e-20
XP_011522561 (OMIM: 613369) PREDICTED: ATP-depende ( 674) 635 100.2 2.9e-20
NP_004389 (OMIM: 601235) probable ATP-dependent RN ( 875) 616 97.7 2.1e-19
XP_016884803 (OMIM: 300160,300958) PREDICTED: ATP- ( 475) 575 91.9 6.7e-18
XP_016884802 (OMIM: 300160,300958) PREDICTED: ATP- ( 476) 575 91.9 6.7e-18
XP_011542194 (OMIM: 300160,300958) PREDICTED: ATP- ( 598) 575 91.9 7.9e-18
NP_001180346 (OMIM: 300160,300958) ATP-dependent R ( 646) 575 92.0 8.3e-18
NP_001180345 (OMIM: 300160,300958) ATP-dependent R ( 661) 575 92.0 8.5e-18
NP_001347 (OMIM: 300160,300958) ATP-dependent RNA ( 662) 575 92.0 8.5e-18
NP_001289481 (OMIM: 400010,415000) ATP-dependent R ( 657) 570 91.3 1.4e-17
NP_004651 (OMIM: 400010,415000) ATP-dependent RNA ( 660) 570 91.3 1.4e-17
NP_001116137 (OMIM: 400010,415000) ATP-dependent R ( 660) 570 91.3 1.4e-17
NP_001311124 (OMIM: 400010,415000) ATP-dependent R ( 637) 551 88.7 8e-17
NP_055555 (OMIM: 268305,608546) eukaryotic initiat ( 411) 545 87.7 1e-16
NP_001407 (OMIM: 602641) eukaryotic initiation fac ( 406) 541 87.1 1.5e-16
>>NP_076950 (OMIM: 610373) ATP-dependent RNA helicase DD (737 aa)
initn: 4835 init1: 4835 opt: 4835 Z-score: 3588.6 bits: 674.6 E(85289): 3.8e-193
Smith-Waterman score: 4835; 100.0% identity (100.0% similar) in 737 aa overlap (1-737:1-737)
10 20 30 40 50 60
pF1KE5 MPGKLLWGDIMELEAPLEESESQKKERQKSDRRKSRHHYDSDEKSETRENGVTDDLDAPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_076 MPGKLLWGDIMELEAPLEESESQKKERQKSDRRKSRHHYDSDEKSETRENGVTDDLDAPK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 AKKSKMKEKLNGDTEEGFNRLSDEFSKSHKSRRKDLPNGDIDEYEKKSKRVSSLDTSTHK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_076 AKKSKMKEKLNGDTEEGFNRLSDEFSKSHKSRRKDLPNGDIDEYEKKSKRVSSLDTSTHK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 SSDNKLEETLTREQKEGAFSNFPISEETIKLLKGRGVTYLFPIQVKTFGPVYEGKDLIAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_076 SSDNKLEETLTREQKEGAFSNFPISEETIKLLKGRGVTYLFPIQVKTFGPVYEGKDLIAQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 ARTGTGKTFSFAIPLIERLQRNQETIKKSRSPKVLVLAPTRELANQVAKDFKDITRKLSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_076 ARTGTGKTFSFAIPLIERLQRNQETIKKSRSPKVLVLAPTRELANQVAKDFKDITRKLSV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 ACFYGGTSYQSQINHIRNGIDILVGTPGRIKDHLQSGRLDLSKLRHVVLDEVDQMLDLGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_076 ACFYGGTSYQSQINHIRNGIDILVGTPGRIKDHLQSGRLDLSKLRHVVLDEVDQMLDLGF
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE5 AEQVEDIIHESYKTDSEDNPQTLLFSATCPQWVYKVAKKYMKSRYEQVDLVGKMTQKAAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_076 AEQVEDIIHESYKTDSEDNPQTLLFSATCPQWVYKVAKKYMKSRYEQVDLVGKMTQKAAT
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE5 TVEHLAIQCHWSQRPAVIGDVLQVYSGSEGRAIIFCETKKNVTEMAMNPHIKQNAQCLHG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_076 TVEHLAIQCHWSQRPAVIGDVLQVYSGSEGRAIIFCETKKNVTEMAMNPHIKQNAQCLHG
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE5 DIAQSQREITLKGFREGSFKVLVATNVAARGLDIPEVDLVIQSSPPQDVESYIHRSGRTG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_076 DIAQSQREITLKGFREGSFKVLVATNVAARGLDIPEVDLVIQSSPPQDVESYIHRSGRTG
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE5 RAGRTGICICFYQPRERGQLRYVEQKAGITFKRVGVPSTMDLVKSKSMDAIRSLASVSYA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_076 RAGRTGICICFYQPRERGQLRYVEQKAGITFKRVGVPSTMDLVKSKSMDAIRSLASVSYA
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE5 AVDFFRPSAQRLIEEKGAVDALAAALAHISGASSFEPRSLITSDKGFVTMTLESLEEIQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_076 AVDFFRPSAQRLIEEKGAVDALAAALAHISGASSFEPRSLITSDKGFVTMTLESLEEIQD
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE5 VSCAWKELNRKLSSNAVSQITRMCLLKGNMGVCFDVPTTESERLQAEWHDSDWILSVPAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_076 VSCAWKELNRKLSSNAVSQITRMCLLKGNMGVCFDVPTTESERLQAEWHDSDWILSVPAK
610 620 630 640 650 660
670 680 690 700 710 720
pF1KE5 LPEIEEYYDGNTSSNSRQRSGWSSGRSGRSGRSGGRSGGRSGRQSRQGSRSGSRQDGRRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_076 LPEIEEYYDGNTSSNSRQRSGWSSGRSGRSGRSGGRSGGRSGRQSRQGSRSGSRQDGRRR
670 680 690 700 710 720
730
pF1KE5 SGNRNRSRSGGHKRSFD
:::::::::::::::::
NP_076 SGNRNRSRSGGHKRSFD
730
>>XP_016872115 (OMIM: 610373) PREDICTED: ATP-dependent R (737 aa)
initn: 4835 init1: 4835 opt: 4835 Z-score: 3588.6 bits: 674.6 E(85289): 3.8e-193
Smith-Waterman score: 4835; 100.0% identity (100.0% similar) in 737 aa overlap (1-737:1-737)
10 20 30 40 50 60
pF1KE5 MPGKLLWGDIMELEAPLEESESQKKERQKSDRRKSRHHYDSDEKSETRENGVTDDLDAPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MPGKLLWGDIMELEAPLEESESQKKERQKSDRRKSRHHYDSDEKSETRENGVTDDLDAPK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 AKKSKMKEKLNGDTEEGFNRLSDEFSKSHKSRRKDLPNGDIDEYEKKSKRVSSLDTSTHK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AKKSKMKEKLNGDTEEGFNRLSDEFSKSHKSRRKDLPNGDIDEYEKKSKRVSSLDTSTHK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 SSDNKLEETLTREQKEGAFSNFPISEETIKLLKGRGVTYLFPIQVKTFGPVYEGKDLIAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SSDNKLEETLTREQKEGAFSNFPISEETIKLLKGRGVTYLFPIQVKTFGPVYEGKDLIAQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 ARTGTGKTFSFAIPLIERLQRNQETIKKSRSPKVLVLAPTRELANQVAKDFKDITRKLSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ARTGTGKTFSFAIPLIERLQRNQETIKKSRSPKVLVLAPTRELANQVAKDFKDITRKLSV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 ACFYGGTSYQSQINHIRNGIDILVGTPGRIKDHLQSGRLDLSKLRHVVLDEVDQMLDLGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ACFYGGTSYQSQINHIRNGIDILVGTPGRIKDHLQSGRLDLSKLRHVVLDEVDQMLDLGF
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE5 AEQVEDIIHESYKTDSEDNPQTLLFSATCPQWVYKVAKKYMKSRYEQVDLVGKMTQKAAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AEQVEDIIHESYKTDSEDNPQTLLFSATCPQWVYKVAKKYMKSRYEQVDLVGKMTQKAAT
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE5 TVEHLAIQCHWSQRPAVIGDVLQVYSGSEGRAIIFCETKKNVTEMAMNPHIKQNAQCLHG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TVEHLAIQCHWSQRPAVIGDVLQVYSGSEGRAIIFCETKKNVTEMAMNPHIKQNAQCLHG
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE5 DIAQSQREITLKGFREGSFKVLVATNVAARGLDIPEVDLVIQSSPPQDVESYIHRSGRTG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DIAQSQREITLKGFREGSFKVLVATNVAARGLDIPEVDLVIQSSPPQDVESYIHRSGRTG
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE5 RAGRTGICICFYQPRERGQLRYVEQKAGITFKRVGVPSTMDLVKSKSMDAIRSLASVSYA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RAGRTGICICFYQPRERGQLRYVEQKAGITFKRVGVPSTMDLVKSKSMDAIRSLASVSYA
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE5 AVDFFRPSAQRLIEEKGAVDALAAALAHISGASSFEPRSLITSDKGFVTMTLESLEEIQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AVDFFRPSAQRLIEEKGAVDALAAALAHISGASSFEPRSLITSDKGFVTMTLESLEEIQD
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE5 VSCAWKELNRKLSSNAVSQITRMCLLKGNMGVCFDVPTTESERLQAEWHDSDWILSVPAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VSCAWKELNRKLSSNAVSQITRMCLLKGNMGVCFDVPTTESERLQAEWHDSDWILSVPAK
610 620 630 640 650 660
670 680 690 700 710 720
pF1KE5 LPEIEEYYDGNTSSNSRQRSGWSSGRSGRSGRSGGRSGGRSGRQSRQGSRSGSRQDGRRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LPEIEEYYDGNTSSNSRQRSGWSSGRSGRSGRSGGRSGGRSGRQSRQGSRSGSRQDGRRR
670 680 690 700 710 720
730
pF1KE5 SGNRNRSRSGGHKRSFD
:::::::::::::::::
XP_016 SGNRNRSRSGGHKRSFD
730
>>XP_016872117 (OMIM: 610373) PREDICTED: ATP-dependent R (672 aa)
initn: 4403 init1: 4403 opt: 4403 Z-score: 3269.8 bits: 615.5 E(85289): 2.2e-175
Smith-Waterman score: 4403; 100.0% identity (100.0% similar) in 672 aa overlap (66-737:1-672)
40 50 60 70 80 90
pF1KE5 RHHYDSDEKSETRENGVTDDLDAPKAKKSKMKEKLNGDTEEGFNRLSDEFSKSHKSRRKD
::::::::::::::::::::::::::::::
XP_016 MKEKLNGDTEEGFNRLSDEFSKSHKSRRKD
10 20 30
100 110 120 130 140 150
pF1KE5 LPNGDIDEYEKKSKRVSSLDTSTHKSSDNKLEETLTREQKEGAFSNFPISEETIKLLKGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LPNGDIDEYEKKSKRVSSLDTSTHKSSDNKLEETLTREQKEGAFSNFPISEETIKLLKGR
40 50 60 70 80 90
160 170 180 190 200 210
pF1KE5 GVTYLFPIQVKTFGPVYEGKDLIAQARTGTGKTFSFAIPLIERLQRNQETIKKSRSPKVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GVTYLFPIQVKTFGPVYEGKDLIAQARTGTGKTFSFAIPLIERLQRNQETIKKSRSPKVL
100 110 120 130 140 150
220 230 240 250 260 270
pF1KE5 VLAPTRELANQVAKDFKDITRKLSVACFYGGTSYQSQINHIRNGIDILVGTPGRIKDHLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VLAPTRELANQVAKDFKDITRKLSVACFYGGTSYQSQINHIRNGIDILVGTPGRIKDHLQ
160 170 180 190 200 210
280 290 300 310 320 330
pF1KE5 SGRLDLSKLRHVVLDEVDQMLDLGFAEQVEDIIHESYKTDSEDNPQTLLFSATCPQWVYK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SGRLDLSKLRHVVLDEVDQMLDLGFAEQVEDIIHESYKTDSEDNPQTLLFSATCPQWVYK
220 230 240 250 260 270
340 350 360 370 380 390
pF1KE5 VAKKYMKSRYEQVDLVGKMTQKAATTVEHLAIQCHWSQRPAVIGDVLQVYSGSEGRAIIF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VAKKYMKSRYEQVDLVGKMTQKAATTVEHLAIQCHWSQRPAVIGDVLQVYSGSEGRAIIF
280 290 300 310 320 330
400 410 420 430 440 450
pF1KE5 CETKKNVTEMAMNPHIKQNAQCLHGDIAQSQREITLKGFREGSFKVLVATNVAARGLDIP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CETKKNVTEMAMNPHIKQNAQCLHGDIAQSQREITLKGFREGSFKVLVATNVAARGLDIP
340 350 360 370 380 390
460 470 480 490 500 510
pF1KE5 EVDLVIQSSPPQDVESYIHRSGRTGRAGRTGICICFYQPRERGQLRYVEQKAGITFKRVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EVDLVIQSSPPQDVESYIHRSGRTGRAGRTGICICFYQPRERGQLRYVEQKAGITFKRVG
400 410 420 430 440 450
520 530 540 550 560 570
pF1KE5 VPSTMDLVKSKSMDAIRSLASVSYAAVDFFRPSAQRLIEEKGAVDALAAALAHISGASSF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VPSTMDLVKSKSMDAIRSLASVSYAAVDFFRPSAQRLIEEKGAVDALAAALAHISGASSF
460 470 480 490 500 510
580 590 600 610 620 630
pF1KE5 EPRSLITSDKGFVTMTLESLEEIQDVSCAWKELNRKLSSNAVSQITRMCLLKGNMGVCFD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EPRSLITSDKGFVTMTLESLEEIQDVSCAWKELNRKLSSNAVSQITRMCLLKGNMGVCFD
520 530 540 550 560 570
640 650 660 670 680 690
pF1KE5 VPTTESERLQAEWHDSDWILSVPAKLPEIEEYYDGNTSSNSRQRSGWSSGRSGRSGRSGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VPTTESERLQAEWHDSDWILSVPAKLPEIEEYYDGNTSSNSRQRSGWSSGRSGRSGRSGG
580 590 600 610 620 630
700 710 720 730
pF1KE5 RSGGRSGRQSRQGSRSGSRQDGRRRSGNRNRSRSGGHKRSFD
::::::::::::::::::::::::::::::::::::::::::
XP_016 RSGGRSGRQSRQGSRSGSRQDGRRRSGNRNRSRSGGHKRSFD
640 650 660 670
>>XP_011538446 (OMIM: 610373) PREDICTED: ATP-dependent R (672 aa)
initn: 4403 init1: 4403 opt: 4403 Z-score: 3269.8 bits: 615.5 E(85289): 2.2e-175
Smith-Waterman score: 4403; 100.0% identity (100.0% similar) in 672 aa overlap (66-737:1-672)
40 50 60 70 80 90
pF1KE5 RHHYDSDEKSETRENGVTDDLDAPKAKKSKMKEKLNGDTEEGFNRLSDEFSKSHKSRRKD
::::::::::::::::::::::::::::::
XP_011 MKEKLNGDTEEGFNRLSDEFSKSHKSRRKD
10 20 30
100 110 120 130 140 150
pF1KE5 LPNGDIDEYEKKSKRVSSLDTSTHKSSDNKLEETLTREQKEGAFSNFPISEETIKLLKGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LPNGDIDEYEKKSKRVSSLDTSTHKSSDNKLEETLTREQKEGAFSNFPISEETIKLLKGR
40 50 60 70 80 90
160 170 180 190 200 210
pF1KE5 GVTYLFPIQVKTFGPVYEGKDLIAQARTGTGKTFSFAIPLIERLQRNQETIKKSRSPKVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GVTYLFPIQVKTFGPVYEGKDLIAQARTGTGKTFSFAIPLIERLQRNQETIKKSRSPKVL
100 110 120 130 140 150
220 230 240 250 260 270
pF1KE5 VLAPTRELANQVAKDFKDITRKLSVACFYGGTSYQSQINHIRNGIDILVGTPGRIKDHLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VLAPTRELANQVAKDFKDITRKLSVACFYGGTSYQSQINHIRNGIDILVGTPGRIKDHLQ
160 170 180 190 200 210
280 290 300 310 320 330
pF1KE5 SGRLDLSKLRHVVLDEVDQMLDLGFAEQVEDIIHESYKTDSEDNPQTLLFSATCPQWVYK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SGRLDLSKLRHVVLDEVDQMLDLGFAEQVEDIIHESYKTDSEDNPQTLLFSATCPQWVYK
220 230 240 250 260 270
340 350 360 370 380 390
pF1KE5 VAKKYMKSRYEQVDLVGKMTQKAATTVEHLAIQCHWSQRPAVIGDVLQVYSGSEGRAIIF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VAKKYMKSRYEQVDLVGKMTQKAATTVEHLAIQCHWSQRPAVIGDVLQVYSGSEGRAIIF
280 290 300 310 320 330
400 410 420 430 440 450
pF1KE5 CETKKNVTEMAMNPHIKQNAQCLHGDIAQSQREITLKGFREGSFKVLVATNVAARGLDIP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 CETKKNVTEMAMNPHIKQNAQCLHGDIAQSQREITLKGFREGSFKVLVATNVAARGLDIP
340 350 360 370 380 390
460 470 480 490 500 510
pF1KE5 EVDLVIQSSPPQDVESYIHRSGRTGRAGRTGICICFYQPRERGQLRYVEQKAGITFKRVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EVDLVIQSSPPQDVESYIHRSGRTGRAGRTGICICFYQPRERGQLRYVEQKAGITFKRVG
400 410 420 430 440 450
520 530 540 550 560 570
pF1KE5 VPSTMDLVKSKSMDAIRSLASVSYAAVDFFRPSAQRLIEEKGAVDALAAALAHISGASSF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VPSTMDLVKSKSMDAIRSLASVSYAAVDFFRPSAQRLIEEKGAVDALAAALAHISGASSF
460 470 480 490 500 510
580 590 600 610 620 630
pF1KE5 EPRSLITSDKGFVTMTLESLEEIQDVSCAWKELNRKLSSNAVSQITRMCLLKGNMGVCFD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EPRSLITSDKGFVTMTLESLEEIQDVSCAWKELNRKLSSNAVSQITRMCLLKGNMGVCFD
520 530 540 550 560 570
640 650 660 670 680 690
pF1KE5 VPTTESERLQAEWHDSDWILSVPAKLPEIEEYYDGNTSSNSRQRSGWSSGRSGRSGRSGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VPTTESERLQAEWHDSDWILSVPAKLPEIEEYYDGNTSSNSRQRSGWSSGRSGRSGRSGG
580 590 600 610 620 630
700 710 720 730
pF1KE5 RSGGRSGRQSRQGSRSGSRQDGRRRSGNRNRSRSGGHKRSFD
::::::::::::::::::::::::::::::::::::::::::
XP_011 RSGGRSGRQSRQGSRSGSRQDGRRRSGNRNRSRSGGHKRSFD
640 650 660 670
>>XP_005270205 (OMIM: 610373) PREDICTED: ATP-dependent R (672 aa)
initn: 4403 init1: 4403 opt: 4403 Z-score: 3269.8 bits: 615.5 E(85289): 2.2e-175
Smith-Waterman score: 4403; 100.0% identity (100.0% similar) in 672 aa overlap (66-737:1-672)
40 50 60 70 80 90
pF1KE5 RHHYDSDEKSETRENGVTDDLDAPKAKKSKMKEKLNGDTEEGFNRLSDEFSKSHKSRRKD
::::::::::::::::::::::::::::::
XP_005 MKEKLNGDTEEGFNRLSDEFSKSHKSRRKD
10 20 30
100 110 120 130 140 150
pF1KE5 LPNGDIDEYEKKSKRVSSLDTSTHKSSDNKLEETLTREQKEGAFSNFPISEETIKLLKGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LPNGDIDEYEKKSKRVSSLDTSTHKSSDNKLEETLTREQKEGAFSNFPISEETIKLLKGR
40 50 60 70 80 90
160 170 180 190 200 210
pF1KE5 GVTYLFPIQVKTFGPVYEGKDLIAQARTGTGKTFSFAIPLIERLQRNQETIKKSRSPKVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GVTYLFPIQVKTFGPVYEGKDLIAQARTGTGKTFSFAIPLIERLQRNQETIKKSRSPKVL
100 110 120 130 140 150
220 230 240 250 260 270
pF1KE5 VLAPTRELANQVAKDFKDITRKLSVACFYGGTSYQSQINHIRNGIDILVGTPGRIKDHLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VLAPTRELANQVAKDFKDITRKLSVACFYGGTSYQSQINHIRNGIDILVGTPGRIKDHLQ
160 170 180 190 200 210
280 290 300 310 320 330
pF1KE5 SGRLDLSKLRHVVLDEVDQMLDLGFAEQVEDIIHESYKTDSEDNPQTLLFSATCPQWVYK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SGRLDLSKLRHVVLDEVDQMLDLGFAEQVEDIIHESYKTDSEDNPQTLLFSATCPQWVYK
220 230 240 250 260 270
340 350 360 370 380 390
pF1KE5 VAKKYMKSRYEQVDLVGKMTQKAATTVEHLAIQCHWSQRPAVIGDVLQVYSGSEGRAIIF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VAKKYMKSRYEQVDLVGKMTQKAATTVEHLAIQCHWSQRPAVIGDVLQVYSGSEGRAIIF
280 290 300 310 320 330
400 410 420 430 440 450
pF1KE5 CETKKNVTEMAMNPHIKQNAQCLHGDIAQSQREITLKGFREGSFKVLVATNVAARGLDIP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 CETKKNVTEMAMNPHIKQNAQCLHGDIAQSQREITLKGFREGSFKVLVATNVAARGLDIP
340 350 360 370 380 390
460 470 480 490 500 510
pF1KE5 EVDLVIQSSPPQDVESYIHRSGRTGRAGRTGICICFYQPRERGQLRYVEQKAGITFKRVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EVDLVIQSSPPQDVESYIHRSGRTGRAGRTGICICFYQPRERGQLRYVEQKAGITFKRVG
400 410 420 430 440 450
520 530 540 550 560 570
pF1KE5 VPSTMDLVKSKSMDAIRSLASVSYAAVDFFRPSAQRLIEEKGAVDALAAALAHISGASSF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VPSTMDLVKSKSMDAIRSLASVSYAAVDFFRPSAQRLIEEKGAVDALAAALAHISGASSF
460 470 480 490 500 510
580 590 600 610 620 630
pF1KE5 EPRSLITSDKGFVTMTLESLEEIQDVSCAWKELNRKLSSNAVSQITRMCLLKGNMGVCFD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EPRSLITSDKGFVTMTLESLEEIQDVSCAWKELNRKLSSNAVSQITRMCLLKGNMGVCFD
520 530 540 550 560 570
640 650 660 670 680 690
pF1KE5 VPTTESERLQAEWHDSDWILSVPAKLPEIEEYYDGNTSSNSRQRSGWSSGRSGRSGRSGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VPTTESERLQAEWHDSDWILSVPAKLPEIEEYYDGNTSSNSRQRSGWSSGRSGRSGRSGG
580 590 600 610 620 630
700 710 720 730
pF1KE5 RSGGRSGRQSRQGSRSGSRQDGRRRSGNRNRSRSGGHKRSFD
::::::::::::::::::::::::::::::::::::::::::
XP_005 RSGGRSGRQSRQGSRSGSRQDGRRRSGNRNRSRSGGHKRSFD
640 650 660 670
>>XP_016872116 (OMIM: 610373) PREDICTED: ATP-dependent R (672 aa)
initn: 4403 init1: 4403 opt: 4403 Z-score: 3269.8 bits: 615.5 E(85289): 2.2e-175
Smith-Waterman score: 4403; 100.0% identity (100.0% similar) in 672 aa overlap (66-737:1-672)
40 50 60 70 80 90
pF1KE5 RHHYDSDEKSETRENGVTDDLDAPKAKKSKMKEKLNGDTEEGFNRLSDEFSKSHKSRRKD
::::::::::::::::::::::::::::::
XP_016 MKEKLNGDTEEGFNRLSDEFSKSHKSRRKD
10 20 30
100 110 120 130 140 150
pF1KE5 LPNGDIDEYEKKSKRVSSLDTSTHKSSDNKLEETLTREQKEGAFSNFPISEETIKLLKGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LPNGDIDEYEKKSKRVSSLDTSTHKSSDNKLEETLTREQKEGAFSNFPISEETIKLLKGR
40 50 60 70 80 90
160 170 180 190 200 210
pF1KE5 GVTYLFPIQVKTFGPVYEGKDLIAQARTGTGKTFSFAIPLIERLQRNQETIKKSRSPKVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GVTYLFPIQVKTFGPVYEGKDLIAQARTGTGKTFSFAIPLIERLQRNQETIKKSRSPKVL
100 110 120 130 140 150
220 230 240 250 260 270
pF1KE5 VLAPTRELANQVAKDFKDITRKLSVACFYGGTSYQSQINHIRNGIDILVGTPGRIKDHLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VLAPTRELANQVAKDFKDITRKLSVACFYGGTSYQSQINHIRNGIDILVGTPGRIKDHLQ
160 170 180 190 200 210
280 290 300 310 320 330
pF1KE5 SGRLDLSKLRHVVLDEVDQMLDLGFAEQVEDIIHESYKTDSEDNPQTLLFSATCPQWVYK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SGRLDLSKLRHVVLDEVDQMLDLGFAEQVEDIIHESYKTDSEDNPQTLLFSATCPQWVYK
220 230 240 250 260 270
340 350 360 370 380 390
pF1KE5 VAKKYMKSRYEQVDLVGKMTQKAATTVEHLAIQCHWSQRPAVIGDVLQVYSGSEGRAIIF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VAKKYMKSRYEQVDLVGKMTQKAATTVEHLAIQCHWSQRPAVIGDVLQVYSGSEGRAIIF
280 290 300 310 320 330
400 410 420 430 440 450
pF1KE5 CETKKNVTEMAMNPHIKQNAQCLHGDIAQSQREITLKGFREGSFKVLVATNVAARGLDIP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CETKKNVTEMAMNPHIKQNAQCLHGDIAQSQREITLKGFREGSFKVLVATNVAARGLDIP
340 350 360 370 380 390
460 470 480 490 500 510
pF1KE5 EVDLVIQSSPPQDVESYIHRSGRTGRAGRTGICICFYQPRERGQLRYVEQKAGITFKRVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EVDLVIQSSPPQDVESYIHRSGRTGRAGRTGICICFYQPRERGQLRYVEQKAGITFKRVG
400 410 420 430 440 450
520 530 540 550 560 570
pF1KE5 VPSTMDLVKSKSMDAIRSLASVSYAAVDFFRPSAQRLIEEKGAVDALAAALAHISGASSF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VPSTMDLVKSKSMDAIRSLASVSYAAVDFFRPSAQRLIEEKGAVDALAAALAHISGASSF
460 470 480 490 500 510
580 590 600 610 620 630
pF1KE5 EPRSLITSDKGFVTMTLESLEEIQDVSCAWKELNRKLSSNAVSQITRMCLLKGNMGVCFD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EPRSLITSDKGFVTMTLESLEEIQDVSCAWKELNRKLSSNAVSQITRMCLLKGNMGVCFD
520 530 540 550 560 570
640 650 660 670 680 690
pF1KE5 VPTTESERLQAEWHDSDWILSVPAKLPEIEEYYDGNTSSNSRQRSGWSSGRSGRSGRSGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VPTTESERLQAEWHDSDWILSVPAKLPEIEEYYDGNTSSNSRQRSGWSSGRSGRSGRSGG
580 590 600 610 620 630
700 710 720 730
pF1KE5 RSGGRSGRQSRQGSRSGSRQDGRRRSGNRNRSRSGGHKRSFD
::::::::::::::::::::::::::::::::::::::::::
XP_016 RSGGRSGRQSRQGSRSGSRQDGRRRSGNRNRSRSGGHKRSFD
640 650 660 670
>>XP_016872118 (OMIM: 610373) PREDICTED: ATP-dependent R (672 aa)
initn: 4403 init1: 4403 opt: 4403 Z-score: 3269.8 bits: 615.5 E(85289): 2.2e-175
Smith-Waterman score: 4403; 100.0% identity (100.0% similar) in 672 aa overlap (66-737:1-672)
40 50 60 70 80 90
pF1KE5 RHHYDSDEKSETRENGVTDDLDAPKAKKSKMKEKLNGDTEEGFNRLSDEFSKSHKSRRKD
::::::::::::::::::::::::::::::
XP_016 MKEKLNGDTEEGFNRLSDEFSKSHKSRRKD
10 20 30
100 110 120 130 140 150
pF1KE5 LPNGDIDEYEKKSKRVSSLDTSTHKSSDNKLEETLTREQKEGAFSNFPISEETIKLLKGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LPNGDIDEYEKKSKRVSSLDTSTHKSSDNKLEETLTREQKEGAFSNFPISEETIKLLKGR
40 50 60 70 80 90
160 170 180 190 200 210
pF1KE5 GVTYLFPIQVKTFGPVYEGKDLIAQARTGTGKTFSFAIPLIERLQRNQETIKKSRSPKVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GVTYLFPIQVKTFGPVYEGKDLIAQARTGTGKTFSFAIPLIERLQRNQETIKKSRSPKVL
100 110 120 130 140 150
220 230 240 250 260 270
pF1KE5 VLAPTRELANQVAKDFKDITRKLSVACFYGGTSYQSQINHIRNGIDILVGTPGRIKDHLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VLAPTRELANQVAKDFKDITRKLSVACFYGGTSYQSQINHIRNGIDILVGTPGRIKDHLQ
160 170 180 190 200 210
280 290 300 310 320 330
pF1KE5 SGRLDLSKLRHVVLDEVDQMLDLGFAEQVEDIIHESYKTDSEDNPQTLLFSATCPQWVYK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SGRLDLSKLRHVVLDEVDQMLDLGFAEQVEDIIHESYKTDSEDNPQTLLFSATCPQWVYK
220 230 240 250 260 270
340 350 360 370 380 390
pF1KE5 VAKKYMKSRYEQVDLVGKMTQKAATTVEHLAIQCHWSQRPAVIGDVLQVYSGSEGRAIIF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VAKKYMKSRYEQVDLVGKMTQKAATTVEHLAIQCHWSQRPAVIGDVLQVYSGSEGRAIIF
280 290 300 310 320 330
400 410 420 430 440 450
pF1KE5 CETKKNVTEMAMNPHIKQNAQCLHGDIAQSQREITLKGFREGSFKVLVATNVAARGLDIP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CETKKNVTEMAMNPHIKQNAQCLHGDIAQSQREITLKGFREGSFKVLVATNVAARGLDIP
340 350 360 370 380 390
460 470 480 490 500 510
pF1KE5 EVDLVIQSSPPQDVESYIHRSGRTGRAGRTGICICFYQPRERGQLRYVEQKAGITFKRVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EVDLVIQSSPPQDVESYIHRSGRTGRAGRTGICICFYQPRERGQLRYVEQKAGITFKRVG
400 410 420 430 440 450
520 530 540 550 560 570
pF1KE5 VPSTMDLVKSKSMDAIRSLASVSYAAVDFFRPSAQRLIEEKGAVDALAAALAHISGASSF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VPSTMDLVKSKSMDAIRSLASVSYAAVDFFRPSAQRLIEEKGAVDALAAALAHISGASSF
460 470 480 490 500 510
580 590 600 610 620 630
pF1KE5 EPRSLITSDKGFVTMTLESLEEIQDVSCAWKELNRKLSSNAVSQITRMCLLKGNMGVCFD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EPRSLITSDKGFVTMTLESLEEIQDVSCAWKELNRKLSSNAVSQITRMCLLKGNMGVCFD
520 530 540 550 560 570
640 650 660 670 680 690
pF1KE5 VPTTESERLQAEWHDSDWILSVPAKLPEIEEYYDGNTSSNSRQRSGWSSGRSGRSGRSGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VPTTESERLQAEWHDSDWILSVPAKLPEIEEYYDGNTSSNSRQRSGWSSGRSGRSGRSGG
580 590 600 610 620 630
700 710 720 730
pF1KE5 RSGGRSGRQSRQGSRSGSRQDGRRRSGNRNRSRSGGHKRSFD
::::::::::::::::::::::::::::::::::::::::::
XP_016 RSGGRSGRQSRQGSRSGSRQDGRRRSGNRNRSRSGGHKRSFD
640 650 660 670
>>XP_016872119 (OMIM: 610373) PREDICTED: ATP-dependent R (443 aa)
initn: 2934 init1: 2934 opt: 2934 Z-score: 2186.4 bits: 414.4 E(85289): 4.8e-115
Smith-Waterman score: 2934; 100.0% identity (100.0% similar) in 443 aa overlap (295-737:1-443)
270 280 290 300 310 320
pF1KE5 GTPGRIKDHLQSGRLDLSKLRHVVLDEVDQMLDLGFAEQVEDIIHESYKTDSEDNPQTLL
::::::::::::::::::::::::::::::
XP_016 MLDLGFAEQVEDIIHESYKTDSEDNPQTLL
10 20 30
330 340 350 360 370 380
pF1KE5 FSATCPQWVYKVAKKYMKSRYEQVDLVGKMTQKAATTVEHLAIQCHWSQRPAVIGDVLQV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FSATCPQWVYKVAKKYMKSRYEQVDLVGKMTQKAATTVEHLAIQCHWSQRPAVIGDVLQV
40 50 60 70 80 90
390 400 410 420 430 440
pF1KE5 YSGSEGRAIIFCETKKNVTEMAMNPHIKQNAQCLHGDIAQSQREITLKGFREGSFKVLVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YSGSEGRAIIFCETKKNVTEMAMNPHIKQNAQCLHGDIAQSQREITLKGFREGSFKVLVA
100 110 120 130 140 150
450 460 470 480 490 500
pF1KE5 TNVAARGLDIPEVDLVIQSSPPQDVESYIHRSGRTGRAGRTGICICFYQPRERGQLRYVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TNVAARGLDIPEVDLVIQSSPPQDVESYIHRSGRTGRAGRTGICICFYQPRERGQLRYVE
160 170 180 190 200 210
510 520 530 540 550 560
pF1KE5 QKAGITFKRVGVPSTMDLVKSKSMDAIRSLASVSYAAVDFFRPSAQRLIEEKGAVDALAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QKAGITFKRVGVPSTMDLVKSKSMDAIRSLASVSYAAVDFFRPSAQRLIEEKGAVDALAA
220 230 240 250 260 270
570 580 590 600 610 620
pF1KE5 ALAHISGASSFEPRSLITSDKGFVTMTLESLEEIQDVSCAWKELNRKLSSNAVSQITRMC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ALAHISGASSFEPRSLITSDKGFVTMTLESLEEIQDVSCAWKELNRKLSSNAVSQITRMC
280 290 300 310 320 330
630 640 650 660 670 680
pF1KE5 LLKGNMGVCFDVPTTESERLQAEWHDSDWILSVPAKLPEIEEYYDGNTSSNSRQRSGWSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LLKGNMGVCFDVPTTESERLQAEWHDSDWILSVPAKLPEIEEYYDGNTSSNSRQRSGWSS
340 350 360 370 380 390
690 700 710 720 730
pF1KE5 GRSGRSGRSGGRSGGRSGRQSRQGSRSGSRQDGRRRSGNRNRSRSGGHKRSFD
:::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GRSGRSGRSGGRSGGRSGRQSRQGSRSGSRQDGRRRSGNRNRSRSGGHKRSFD
400 410 420 430 440
>>NP_004719 (OMIM: 606357) nucleolar RNA helicase 2 isof (783 aa)
initn: 2783 init1: 2528 opt: 2676 Z-score: 1992.5 bits: 379.4 E(85289): 3.1e-104
Smith-Waterman score: 2735; 60.8% identity (79.9% similar) in 727 aa overlap (18-736:82-777)
10 20 30 40
pF1KE5 MPGKLLWGDIMELEAPLEESESQKKERQKSDRRKS----RHHYDSDE
: :... . . :: :.:. .. .:
NP_004 FPKAKQVKKKAEPSEVDMNSPKSKKAKKKEEPSQNDISPKTKSLRKKKEPIEKKVVSSKT
60 70 80 90 100 110
50 60 70 80 90 100
pF1KE5 KSETR-ENGVTDDLDAPKAKKSKMKEKLNGDTEEGFNRLSDEFSKSHKSRRKDLPNGDID
:. :. :. ...:::: :: : ....::.:.: .:.. : : :. : .
NP_004 KKVTKNEEPSEEEIDAPKPKKMKKEKEMNGETREKSPKLKNGFP--H-------PEPDCN
120 130 140 150 160
110 120 130 140 150 160
pF1KE5 EYEKKSKRVSSLDTSTHKSSDNKLEETLTREQKEGAFSNFPISEETIKLLKGRGVTYLFP
: :.. :....:. . ::::::::::::::::::::::::::.:::
NP_004 PSEAASEE-----------SNSEIEQEIPVEQKEGAFSNFPISEETIKLLKGRGVTFLFP
170 180 190 200 210
170 180 190 200 210 220
pF1KE5 IQVKTFGPVYEGKDLIAQARTGTGKTFSFAIPLIERLQRNQETIKKSRSPKVLVLAPTRE
::.::: :: ::::::::::::::::::::::::.:. . . :..:.:.:::::::::
NP_004 IQAKTFHHVYSGKDLIAQARTGTGKTFSFAIPLIEKLHGELQDRKRGRAPQVLVLAPTRE
220 230 240 250 260 270
230 240 250 260 270 280
pF1KE5 LANQVAKDFKDITRKLSVACFYGGTSYQSQINHIRNGIDILVGTPGRIKDHLQSGRLDLS
:::::.:::.:::.::::::::::: : .:....:::::::::::::::::.:.:.:::.
NP_004 LANQVSKDFSDITKKLSVACFYGGTPYGGQFERMRNGIDILVGTPGRIKDHIQNGKLDLT
280 290 300 310 320 330
290 300 310 320 330 340
pF1KE5 KLRHVVLDEVDQMLDLGFAEQVEDIIHESYKTDSEDNPQTLLFSATCPQWVYKVAKKYMK
::.::::::::::::.:::.:::.:. .:: ::::::::::::::::.::..:::::::
NP_004 KLKHVVLDEVDQMLDMGFADQVEEILSVAYKKDSEDNPQTLLFSATCPHWVFNVAKKYMK
340 350 360 370 380 390
350 360 370 380 390 400
pF1KE5 SRYEQVDLVGKMTQKAATTVEHLAIQCHWSQRPAVIGDVLQVYSGSEGRAIIFCETKKNV
: ::::::.:: :::.: :::::::.:::.:: ::::::..:::: .::.::::::::..
NP_004 STYEQVDLIGKKTQKTAITVEHLAIKCHWTQRAAVIGDVIRVYSGHQGRTIIFCETKKEA
400 410 420 430 440 450
410 420 430 440 450 460
pF1KE5 TEMAMNPHIKQNAQCLHGDIAQSQREITLKGFREGSFKVLVATNVAARGLDIPEVDLVIQ
:...: :::.:: ::::: :.::::::::::.::: ::::::::::::::::::::::
NP_004 QELSQNSAIKQDAQSLHGDIPQKQREITLKGFRNGSFGVLVATNVAARGLDIPEVDLVIQ
460 470 480 490 500 510
470 480 490 500 510 520
pF1KE5 SSPPQDVESYIHRSGRTGRAGRTGICICFYQPRERGQLRYVEQKAGITFKRVGVPSTMDL
::::.:::::::::::::::::::.:::::: .:. :: ::::::: :::.::::. ..
NP_004 SSPPKDVESYIHRSGRTGRAGRTGVCICFYQHKEEYQLVQVEQKAGIKFKRIGVPSATEI
520 530 540 550 560 570
530 540 550 560 570 580
pF1KE5 VKSKSMDAIRSLASVSYAAVDFFRPSAQRLIEEKGAVDALAAALAHISGASSFEPRSLIT
.:..: :::: : :: .:.. :. ::..::::::::.::::::::::::.: . ::::.
NP_004 IKASSKDAIRLLDSVPPTAISHFKQSAEKLIEEKGAVEALAAALAHISGATSVDQRSLIN
580 590 600 610 620 630
590 600 610 620 630 640
pF1KE5 SDKGFVTMTLESLEEIQDVSCAWKELNRKLSSNAVSQITRMCLLKGNMGVCFDVPTTESE
:. ::::: :. :. ..: :::::...:. . :.. : .:::..::::::::.
NP_004 SNVGFVTMILQCSIEMPNISYAWKELKEQLGEEIDSKVKGMVFLKGKLGVCFDVPTASVT
640 650 660 670 680 690
650 660 670 680 690 700
pF1KE5 RLQAEWHDSD-WILSVPAKLPEIEEYYDGNTSSNSRQRSGWSSGRSGRSGRSGGRSGGRS
..: .:::: : ::: .. ::.: .: .:. . : : : : :.:.:
NP_004 EIQEKWHDSRRWQLSVATEQPELEGPREG--------YGGFRGQREGSRGFRGQRDGNRR
700 710 720 730 740
710 720 730
pF1KE5 GRQSRQGSRSGSRQDGRRRSG-NR-NRSRSGGHKRSFD
: .:.::: : : :.: .: :. :::.. :.::::
NP_004 FRGQREGSR-GPR--GQRSGGGNKSNRSQNKGQKRSFSKAFGQ
750 760 770 780
>>NP_001243839 (OMIM: 606357) nucleolar RNA helicase 2 i (715 aa)
initn: 2783 init1: 2528 opt: 2675 Z-score: 1992.2 bits: 379.2 E(85289): 3.1e-104
Smith-Waterman score: 2735; 60.8% identity (79.9% similar) in 727 aa overlap (18-736:14-709)
10 20 30 40 50
pF1KE5 MPGKLLWGDIMELEAPLEESESQKKERQKSDRRKS----RHHYDSDEKSETR-ENGVTDD
: :... . . :: :.:. .. .: :. :. :. ..
NP_001 MNSPKSKKAKKKEEPSQNDISPKTKSLRKKKEPIEKKVVSSKTKKVTKNEEPSEEE
10 20 30 40 50
60 70 80 90 100 110
pF1KE5 LDAPKAKKSKMKEKLNGDTEEGFNRLSDEFSKSHKSRRKDLPNGDIDEYEKKSKRVSSLD
.:::: :: : ....::.:.: .:.. : : :. : . : :..
NP_001 IDAPKPKKMKKEKEMNGETREKSPKLKNGFP--H-------PEPDCNPSEAASEE-----
60 70 80 90 100
120 130 140 150 160 170
pF1KE5 TSTHKSSDNKLEETLTREQKEGAFSNFPISEETIKLLKGRGVTYLFPIQVKTFGPVYEGK
:....:. . ::::::::::::::::::::::::::.:::::.::: :: ::
NP_001 ------SNSEIEQEIPVEQKEGAFSNFPISEETIKLLKGRGVTFLFPIQAKTFHHVYSGK
110 120 130 140 150
180 190 200 210 220 230
pF1KE5 DLIAQARTGTGKTFSFAIPLIERLQRNQETIKKSRSPKVLVLAPTRELANQVAKDFKDIT
::::::::::::::::::::::.:. . . :..:.:.::::::::::::::.:::.:::
NP_001 DLIAQARTGTGKTFSFAIPLIEKLHGELQDRKRGRAPQVLVLAPTRELANQVSKDFSDIT
160 170 180 190 200 210
240 250 260 270 280 290
pF1KE5 RKLSVACFYGGTSYQSQINHIRNGIDILVGTPGRIKDHLQSGRLDLSKLRHVVLDEVDQM
.::::::::::: : .:....:::::::::::::::::.:.:.:::.::.::::::::::
NP_001 KKLSVACFYGGTPYGGQFERMRNGIDILVGTPGRIKDHIQNGKLDLTKLKHVVLDEVDQM
220 230 240 250 260 270
300 310 320 330 340 350
pF1KE5 LDLGFAEQVEDIIHESYKTDSEDNPQTLLFSATCPQWVYKVAKKYMKSRYEQVDLVGKMT
::.:::.:::.:. .:: ::::::::::::::::.::..:::::::: ::::::.:: :
NP_001 LDMGFADQVEEILSVAYKKDSEDNPQTLLFSATCPHWVFNVAKKYMKSTYEQVDLIGKKT
280 290 300 310 320 330
360 370 380 390 400 410
pF1KE5 QKAATTVEHLAIQCHWSQRPAVIGDVLQVYSGSEGRAIIFCETKKNVTEMAMNPHIKQNA
::.: :::::::.:::.:: ::::::..:::: .::.::::::::.. :...: :::.:
NP_001 QKTAITVEHLAIKCHWTQRAAVIGDVIRVYSGHQGRTIIFCETKKEAQELSQNSAIKQDA
340 350 360 370 380 390
420 430 440 450 460 470
pF1KE5 QCLHGDIAQSQREITLKGFREGSFKVLVATNVAARGLDIPEVDLVIQSSPPQDVESYIHR
: ::::: :.::::::::::.::: ::::::::::::::::::::::::::.::::::::
NP_001 QSLHGDIPQKQREITLKGFRNGSFGVLVATNVAARGLDIPEVDLVIQSSPPKDVESYIHR
400 410 420 430 440 450
480 490 500 510 520 530
pF1KE5 SGRTGRAGRTGICICFYQPRERGQLRYVEQKAGITFKRVGVPSTMDLVKSKSMDAIRSLA
:::::::::::.:::::: .:. :: ::::::: :::.::::. ...:..: :::: :
NP_001 SGRTGRAGRTGVCICFYQHKEEYQLVQVEQKAGIKFKRIGVPSATEIIKASSKDAIRLLD
460 470 480 490 500 510
540 550 560 570 580 590
pF1KE5 SVSYAAVDFFRPSAQRLIEEKGAVDALAAALAHISGASSFEPRSLITSDKGFVTMTLESL
:: .:.. :. ::..::::::::.::::::::::::.: . ::::.:. ::::: :.
NP_001 SVPPTAISHFKQSAEKLIEEKGAVEALAAALAHISGATSVDQRSLINSNVGFVTMILQCS
520 530 540 550 560 570
600 610 620 630 640 650
pF1KE5 EEIQDVSCAWKELNRKLSSNAVSQITRMCLLKGNMGVCFDVPTTESERLQAEWHDSD-WI
:. ..: :::::...:. . :.. : .:::..::::::::. ..: .:::: :
NP_001 IEMPNISYAWKELKEQLGEEIDSKVKGMVFLKGKLGVCFDVPTASVTEIQEKWHDSRRWQ
580 590 600 610 620 630
660 670 680 690 700 710
pF1KE5 LSVPAKLPEIEEYYDGNTSSNSRQRSGWSSGRSGRSGRSGGRSGGRSGRQSRQGSRSGSR
::: .. ::.: .: .:. . : : : : :.:.: : .:.::: : :
NP_001 LSVATEQPELEGPREG--------YGGFRGQREGSRGFRGQRDGNRRFRGQREGSR-GPR
640 650 660 670 680
720 730
pF1KE5 QDGRRRSG-NR-NRSRSGGHKRSFD
:.: .: :. :::.. :.::::
NP_001 --GQRSGGGNKSNRSQNKGQKRSFSKAFGQ
690 700 710
737 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 05:58:26 2016 done: Tue Nov 8 05:58:27 2016
Total Scan time: 8.230 Total Display time: 0.160
Function used was FASTA [36.3.4 Apr, 2011]