FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5682, 548 aa 1>>>pF1KE5682 548 - 548 aa - 548 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 9.9404+/-0.00087; mu= -2.2873+/- 0.052 mean_var=235.5638+/-48.094, 0's: 0 Z-trim(114.3): 31 B-trim: 0 in 0/56 Lambda= 0.083564 statistics sampled from 14856 (14881) to 14856 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.782), E-opt: 0.2 (0.457), width: 16 Scan time: 2.930 The best scores are: opt bits E(32554) CCDS11119.1 WRAP53 gene_id:55135|Hs108|chr17 ( 548) 3843 476.2 4.4e-134 >>CCDS11119.1 WRAP53 gene_id:55135|Hs108|chr17 (548 aa) initn: 3843 init1: 3843 opt: 3843 Z-score: 2520.6 bits: 476.2 E(32554): 4.4e-134 Smith-Waterman score: 3843; 100.0% identity (100.0% similar) in 548 aa overlap (1-548:1-548) 10 20 30 40 50 60 pF1KE5 MKTLETQPLAPDCCPSDQDPAPAHPSPHASPMNKNADSELMPPPPERGDPPRLSPDPVAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 MKTLETQPLAPDCCPSDQDPAPAHPSPHASPMNKNADSELMPPPPERGDPPRLSPDPVAG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 SAVSQELREGDPVSLSTPLETEFGSPSELSPRIEEQELSENTSLPAEEANGSLSEEEANG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 SAVSQELREGDPVSLSTPLETEFGSPSELSPRIEEQELSENTSLPAEEANGSLSEEEANG 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 PELGSGKAMEDTSGEPAAEDEGDTAWNYSFSQLPRFLSGSWSEFSTQPENFLKGCKWAPD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 PELGSGKAMEDTSGEPAAEDEGDTAWNYSFSQLPRFLSGSWSEFSTQPENFLKGCKWAPD 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 GSCILTNSADNILRIYNLPPELYHEGEQVEYAEMVPVLRMVEGDTIYDYCWYSLMSSAQP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 GSCILTNSADNILRIYNLPPELYHEGEQVEYAEMVPVLRMVEGDTIYDYCWYSLMSSAQP 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 DTSYVASSSRENPIHIWDAFTGELRASFRAYNHLDELTAAHSLCFSPDGSQLFCGFNRTV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 DTSYVASSSRENPIHIWDAFTGELRASFRAYNHLDELTAAHSLCFSPDGSQLFCGFNRTV 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE5 RVFSTARPGRDCEVRATFAKKQGQSGIISCIAFSPAQPLYACGSYGRSLGLYAWDDGSPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 RVFSTARPGRDCEVRATFAKKQGQSGIISCIAFSPAQPLYACGSYGRSLGLYAWDDGSPL 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE5 ALLGGHQGGITHLCFHPDGNRFFSGARKDAELLCWDLRQSGYPLWSLGREVTTNQRIYFD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 ALLGGHQGGITHLCFHPDGNRFFSGARKDAELLCWDLRQSGYPLWSLGREVTTNQRIYFD 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE5 LDPTGQFLVSGSTSGAVSVWDTDGPGNDGKPEPVLSFLPQKDCTNGVSLHPSLPLLATAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 LDPTGQFLVSGSTSGAVSVWDTDGPGNDGKPEPVLSFLPQKDCTNGVSLHPSLPLLATAS 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE5 GQRVFPEPTESGDEGEELGLPLLSTRHVHLECRLQLWWCGGAPDSSIPDDHQGEKGQGGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 GQRVFPEPTESGDEGEELGLPLLSTRHVHLECRLQLWWCGGAPDSSIPDDHQGEKGQGGT 490 500 510 520 530 540 pF1KE5 EGGVGELI :::::::: CCDS11 EGGVGELI 548 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 05:49:23 2016 done: Tue Nov 8 05:49:24 2016 Total Scan time: 2.930 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]