Result of FASTA (ccds) for
pFN21AE5645
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE5645, 480 aa
1>>>pF1KE5645 480 - 480 aa - 480 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.0199+/-0.000837; mu= 10.6342+/- 0.051
mean_var=113.5159+/-22.901, 0's: 0 Z-trim(110.7): 27 B-trim: 178 in 1/50
Lambda= 0.120378
statistics sampled from 11808 (11830) to 11808 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.711), E-opt: 0.2 (0.363), width: 16
Scan time: 3.070
The best scores are: opt bits E(32554)
CCDS56171.1 SP100 gene_id:6672|Hs108|chr2 ( 480) 3213 568.7 4.7e-162
CCDS56170.1 SP100 gene_id:6672|Hs108|chr2 ( 688) 3195 565.7 5.5e-161
CCDS2477.1 SP100 gene_id:6672|Hs108|chr2 ( 879) 3195 565.7 6.8e-161
CCDS42832.1 SP100 gene_id:6672|Hs108|chr2 ( 885) 3195 565.7 6.9e-161
CCDS56173.1 SP100 gene_id:6672|Hs108|chr2 ( 445) 2962 525.1 5.8e-149
CCDS56172.1 SP100 gene_id:6672|Hs108|chr2 ( 452) 2934 520.3 1.7e-147
CCDS46538.1 SP140L gene_id:93349|Hs108|chr2 ( 580) 925 171.4 2.3e-42
CCDS77537.1 SP140L gene_id:93349|Hs108|chr2 ( 520) 754 141.7 1.8e-33
CCDS77536.1 SP140L gene_id:93349|Hs108|chr2 ( 555) 754 141.7 1.9e-33
CCDS63149.1 SP140 gene_id:11262|Hs108|chr2 ( 753) 477 93.7 7.4e-19
CCDS42831.1 SP140 gene_id:11262|Hs108|chr2 ( 867) 469 92.3 2.2e-18
CCDS63150.1 SP140 gene_id:11262|Hs108|chr2 ( 840) 460 90.7 6.3e-18
CCDS63151.1 SP140 gene_id:11262|Hs108|chr2 ( 807) 453 89.5 1.4e-17
CCDS54435.1 SP110 gene_id:3431|Hs108|chr2 ( 555) 423 84.2 3.8e-16
CCDS2476.1 SP110 gene_id:3431|Hs108|chr2 ( 549) 418 83.4 6.9e-16
CCDS2474.1 SP110 gene_id:3431|Hs108|chr2 ( 689) 418 83.4 8.4e-16
CCDS2475.1 SP110 gene_id:3431|Hs108|chr2 ( 713) 418 83.4 8.6e-16
CCDS33392.1 SP140 gene_id:11262|Hs108|chr2 ( 172) 380 76.5 2.5e-14
>>CCDS56171.1 SP100 gene_id:6672|Hs108|chr2 (480 aa)
initn: 3213 init1: 3213 opt: 3213 Z-score: 3022.9 bits: 568.7 E(32554): 4.7e-162
Smith-Waterman score: 3213; 100.0% identity (100.0% similar) in 480 aa overlap (1-480:1-480)
10 20 30 40 50 60
pF1KE5 MAGGGGDLSTRRLNECISPVANEMNHLPAHSHDLQRMFTEDQGVDDRLLYDIVFKHFKRN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 MAGGGGDLSTRRLNECISPVANEMNHLPAHSHDLQRMFTEDQGVDDRLLYDIVFKHFKRN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 KVEISNAIKKTFPFLEGLRDRDLITNKMFEDSQDSCRNLVPVQRVVYNVLSELEKTFNLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 KVEISNAIKKTFPFLEGLRDRDLITNKMFEDSQDSCRNLVPVQRVVYNVLSELEKTFNLP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 VLEALFSDVNMQEYPDLIHIYKGFENVIHDKLPLQESEEEEREERSGLQLSLEQGTGENS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 VLEALFSDVNMQEYPDLIHIYKGFENVIHDKLPLQESEEEEREERSGLQLSLEQGTGENS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 FRSLTWPPSGSPSHAGTTPPENGLSEHPCETEQINAKRKDTTSDKDDSLGSQQTNEQCAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 FRSLTWPPSGSPSHAGTTPPENGLSEHPCETEQINAKRKDTTSDKDDSLGSQQTNEQCAQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 KAEPTESCEQIAVQVNNGDAGREMPCPLPCDEESPEAELHNHGIQINSCSVRLVDIKKEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 KAEPTESCEQIAVQVNNGDAGREMPCPLPCDEESPEAELHNHGIQINSCSVRLVDIKKEK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE5 PFSNSKVECQAQARTHHNQASDIIVISSEDSEGSTDVDEPLEVFISAPRSEPVINNDNPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 PFSNSKVECQAQARTHHNQASDIIVISSEDSEGSTDVDEPLEVFISAPRSEPVINNDNPL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE5 ESNDEKEGQEATCSRPQIVPEPMDFRKLSTFRESFKKRVIGQDHDFSESSEEEAPAEASS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 ESNDEKEGQEATCSRPQIVPEPMDFRKLSTFRESFKKRVIGQDHDFSESSEEEAPAEASS
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE5 GALRSKHGEKAPMTSRSTSTWRIPSRKRRFSSSDFSDLSNGEELQETCSSSLRRGSGKED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 GALRSKHGEKAPMTSRSTSTWRIPSRKRRFSSSDFSDLSNGEELQETCSSSLRRGSGKED
430 440 450 460 470 480
>>CCDS56170.1 SP100 gene_id:6672|Hs108|chr2 (688 aa)
initn: 3261 init1: 3195 opt: 3195 Z-score: 3003.6 bits: 565.7 E(32554): 5.5e-161
Smith-Waterman score: 3195; 99.6% identity (100.0% similar) in 479 aa overlap (1-479:1-479)
10 20 30 40 50 60
pF1KE5 MAGGGGDLSTRRLNECISPVANEMNHLPAHSHDLQRMFTEDQGVDDRLLYDIVFKHFKRN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 MAGGGGDLSTRRLNECISPVANEMNHLPAHSHDLQRMFTEDQGVDDRLLYDIVFKHFKRN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 KVEISNAIKKTFPFLEGLRDRDLITNKMFEDSQDSCRNLVPVQRVVYNVLSELEKTFNLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 KVEISNAIKKTFPFLEGLRDRDLITNKMFEDSQDSCRNLVPVQRVVYNVLSELEKTFNLP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 VLEALFSDVNMQEYPDLIHIYKGFENVIHDKLPLQESEEEEREERSGLQLSLEQGTGENS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 VLEALFSDVNMQEYPDLIHIYKGFENVIHDKLPLQESEEEEREERSGLQLSLEQGTGENS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 FRSLTWPPSGSPSHAGTTPPENGLSEHPCETEQINAKRKDTTSDKDDSLGSQQTNEQCAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 FRSLTWPPSGSPSHAGTTPPENGLSEHPCETEQINAKRKDTTSDKDDSLGSQQTNEQCAQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 KAEPTESCEQIAVQVNNGDAGREMPCPLPCDEESPEAELHNHGIQINSCSVRLVDIKKEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 KAEPTESCEQIAVQVNNGDAGREMPCPLPCDEESPEAELHNHGIQINSCSVRLVDIKKEK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE5 PFSNSKVECQAQARTHHNQASDIIVISSEDSEGSTDVDEPLEVFISAPRSEPVINNDNPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 PFSNSKVECQAQARTHHNQASDIIVISSEDSEGSTDVDEPLEVFISAPRSEPVINNDNPL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE5 ESNDEKEGQEATCSRPQIVPEPMDFRKLSTFRESFKKRVIGQDHDFSESSEEEAPAEASS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 ESNDEKEGQEATCSRPQIVPEPMDFRKLSTFRESFKKRVIGQDHDFSESSEEEAPAEASS
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE5 GALRSKHGEKAPMTSRSTSTWRIPSRKRRFSSSDFSDLSNGEELQETCSSSLRRGSGKED
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::..
CCDS56 GALRSKHGEKAPMTSRSTSTWRIPSRKRRFSSSDFSDLSNGEELQETCSSSLRRGSGSQP
430 440 450 460 470 480
CCDS56 QEPENKKCSCVMCFPKGVPRSQEARTESSQASDMMDTMDVENNSTLEKHSGKRRKKRRHR
490 500 510 520 530 540
>>CCDS2477.1 SP100 gene_id:6672|Hs108|chr2 (879 aa)
initn: 3261 init1: 3195 opt: 3195 Z-score: 3002.0 bits: 565.7 E(32554): 6.8e-161
Smith-Waterman score: 3195; 99.6% identity (100.0% similar) in 479 aa overlap (1-479:1-479)
10 20 30 40 50 60
pF1KE5 MAGGGGDLSTRRLNECISPVANEMNHLPAHSHDLQRMFTEDQGVDDRLLYDIVFKHFKRN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 MAGGGGDLSTRRLNECISPVANEMNHLPAHSHDLQRMFTEDQGVDDRLLYDIVFKHFKRN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 KVEISNAIKKTFPFLEGLRDRDLITNKMFEDSQDSCRNLVPVQRVVYNVLSELEKTFNLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 KVEISNAIKKTFPFLEGLRDRDLITNKMFEDSQDSCRNLVPVQRVVYNVLSELEKTFNLP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 VLEALFSDVNMQEYPDLIHIYKGFENVIHDKLPLQESEEEEREERSGLQLSLEQGTGENS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 VLEALFSDVNMQEYPDLIHIYKGFENVIHDKLPLQESEEEEREERSGLQLSLEQGTGENS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 FRSLTWPPSGSPSHAGTTPPENGLSEHPCETEQINAKRKDTTSDKDDSLGSQQTNEQCAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 FRSLTWPPSGSPSHAGTTPPENGLSEHPCETEQINAKRKDTTSDKDDSLGSQQTNEQCAQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 KAEPTESCEQIAVQVNNGDAGREMPCPLPCDEESPEAELHNHGIQINSCSVRLVDIKKEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 KAEPTESCEQIAVQVNNGDAGREMPCPLPCDEESPEAELHNHGIQINSCSVRLVDIKKEK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE5 PFSNSKVECQAQARTHHNQASDIIVISSEDSEGSTDVDEPLEVFISAPRSEPVINNDNPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 PFSNSKVECQAQARTHHNQASDIIVISSEDSEGSTDVDEPLEVFISAPRSEPVINNDNPL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE5 ESNDEKEGQEATCSRPQIVPEPMDFRKLSTFRESFKKRVIGQDHDFSESSEEEAPAEASS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 ESNDEKEGQEATCSRPQIVPEPMDFRKLSTFRESFKKRVIGQDHDFSESSEEEAPAEASS
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE5 GALRSKHGEKAPMTSRSTSTWRIPSRKRRFSSSDFSDLSNGEELQETCSSSLRRGSGKED
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::..
CCDS24 GALRSKHGEKAPMTSRSTSTWRIPSRKRRFSSSDFSDLSNGEELQETCSSSLRRGSGSQP
430 440 450 460 470 480
CCDS24 QEPENKKCSCVMCFPKGVPRSQEARTESSQASDMMDTMDVENNSTLEKHSGKRRKKRRHR
490 500 510 520 530 540
>>CCDS42832.1 SP100 gene_id:6672|Hs108|chr2 (885 aa)
initn: 3261 init1: 3195 opt: 3195 Z-score: 3002.0 bits: 565.7 E(32554): 6.9e-161
Smith-Waterman score: 3195; 99.6% identity (100.0% similar) in 479 aa overlap (1-479:1-479)
10 20 30 40 50 60
pF1KE5 MAGGGGDLSTRRLNECISPVANEMNHLPAHSHDLQRMFTEDQGVDDRLLYDIVFKHFKRN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 MAGGGGDLSTRRLNECISPVANEMNHLPAHSHDLQRMFTEDQGVDDRLLYDIVFKHFKRN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 KVEISNAIKKTFPFLEGLRDRDLITNKMFEDSQDSCRNLVPVQRVVYNVLSELEKTFNLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 KVEISNAIKKTFPFLEGLRDRDLITNKMFEDSQDSCRNLVPVQRVVYNVLSELEKTFNLP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 VLEALFSDVNMQEYPDLIHIYKGFENVIHDKLPLQESEEEEREERSGLQLSLEQGTGENS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 VLEALFSDVNMQEYPDLIHIYKGFENVIHDKLPLQESEEEEREERSGLQLSLEQGTGENS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 FRSLTWPPSGSPSHAGTTPPENGLSEHPCETEQINAKRKDTTSDKDDSLGSQQTNEQCAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 FRSLTWPPSGSPSHAGTTPPENGLSEHPCETEQINAKRKDTTSDKDDSLGSQQTNEQCAQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 KAEPTESCEQIAVQVNNGDAGREMPCPLPCDEESPEAELHNHGIQINSCSVRLVDIKKEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 KAEPTESCEQIAVQVNNGDAGREMPCPLPCDEESPEAELHNHGIQINSCSVRLVDIKKEK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE5 PFSNSKVECQAQARTHHNQASDIIVISSEDSEGSTDVDEPLEVFISAPRSEPVINNDNPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 PFSNSKVECQAQARTHHNQASDIIVISSEDSEGSTDVDEPLEVFISAPRSEPVINNDNPL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE5 ESNDEKEGQEATCSRPQIVPEPMDFRKLSTFRESFKKRVIGQDHDFSESSEEEAPAEASS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 ESNDEKEGQEATCSRPQIVPEPMDFRKLSTFRESFKKRVIGQDHDFSESSEEEAPAEASS
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE5 GALRSKHGEKAPMTSRSTSTWRIPSRKRRFSSSDFSDLSNGEELQETCSSSLRRGSGKED
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::..
CCDS42 GALRSKHGEKAPMTSRSTSTWRIPSRKRRFSSSDFSDLSNGEELQETCSSSLRRGSGSQP
430 440 450 460 470 480
CCDS42 QEPENKKCSCVMCFPKGVPRSQEARTESSQASDMMDTMDVENNSTLEKHSGKRRKKRRHR
490 500 510 520 530 540
>>CCDS56173.1 SP100 gene_id:6672|Hs108|chr2 (445 aa)
initn: 2962 init1: 2962 opt: 2962 Z-score: 2787.8 bits: 525.1 E(32554): 5.8e-149
Smith-Waterman score: 2962; 100.0% identity (100.0% similar) in 444 aa overlap (37-480:2-445)
10 20 30 40 50 60
pF1KE5 DLSTRRLNECISPVANEMNHLPAHSHDLQRMFTEDQGVDDRLLYDIVFKHFKRNKVEISN
::::::::::::::::::::::::::::::
CCDS56 MMFTEDQGVDDRLLYDIVFKHFKRNKVEISN
10 20 30
70 80 90 100 110 120
pF1KE5 AIKKTFPFLEGLRDRDLITNKMFEDSQDSCRNLVPVQRVVYNVLSELEKTFNLPVLEALF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 AIKKTFPFLEGLRDRDLITNKMFEDSQDSCRNLVPVQRVVYNVLSELEKTFNLPVLEALF
40 50 60 70 80 90
130 140 150 160 170 180
pF1KE5 SDVNMQEYPDLIHIYKGFENVIHDKLPLQESEEEEREERSGLQLSLEQGTGENSFRSLTW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 SDVNMQEYPDLIHIYKGFENVIHDKLPLQESEEEEREERSGLQLSLEQGTGENSFRSLTW
100 110 120 130 140 150
190 200 210 220 230 240
pF1KE5 PPSGSPSHAGTTPPENGLSEHPCETEQINAKRKDTTSDKDDSLGSQQTNEQCAQKAEPTE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 PPSGSPSHAGTTPPENGLSEHPCETEQINAKRKDTTSDKDDSLGSQQTNEQCAQKAEPTE
160 170 180 190 200 210
250 260 270 280 290 300
pF1KE5 SCEQIAVQVNNGDAGREMPCPLPCDEESPEAELHNHGIQINSCSVRLVDIKKEKPFSNSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 SCEQIAVQVNNGDAGREMPCPLPCDEESPEAELHNHGIQINSCSVRLVDIKKEKPFSNSK
220 230 240 250 260 270
310 320 330 340 350 360
pF1KE5 VECQAQARTHHNQASDIIVISSEDSEGSTDVDEPLEVFISAPRSEPVINNDNPLESNDEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 VECQAQARTHHNQASDIIVISSEDSEGSTDVDEPLEVFISAPRSEPVINNDNPLESNDEK
280 290 300 310 320 330
370 380 390 400 410 420
pF1KE5 EGQEATCSRPQIVPEPMDFRKLSTFRESFKKRVIGQDHDFSESSEEEAPAEASSGALRSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 EGQEATCSRPQIVPEPMDFRKLSTFRESFKKRVIGQDHDFSESSEEEAPAEASSGALRSK
340 350 360 370 380 390
430 440 450 460 470 480
pF1KE5 HGEKAPMTSRSTSTWRIPSRKRRFSSSDFSDLSNGEELQETCSSSLRRGSGKED
::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 HGEKAPMTSRSTSTWRIPSRKRRFSSSDFSDLSNGEELQETCSSSLRRGSGKED
400 410 420 430 440
>>CCDS56172.1 SP100 gene_id:6672|Hs108|chr2 (452 aa)
initn: 2621 init1: 2621 opt: 2934 Z-score: 2761.4 bits: 520.3 E(32554): 1.7e-147
Smith-Waterman score: 2940; 94.2% identity (94.2% similar) in 480 aa overlap (1-480:1-452)
10 20 30 40 50 60
pF1KE5 MAGGGGDLSTRRLNECISPVANEMNHLPAHSHDLQRMFTEDQGVDDRLLYDIVFKHFKRN
::::::::::: ::::::::::::::::::::::::
CCDS56 MAGGGGDLSTR-------------------------MFTEDQGVDDRLLYDIVFKHFKRN
10 20 30
70 80 90 100 110 120
pF1KE5 KVEISNAIKKTFPFLEGLRDRDLITNKMFEDSQDSCRNLVPVQRVVYNVLSELEKTFNLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 KVEISNAIKKTFPFLEGLRDRDLITNKMFEDSQDSCRNLVPVQRVVYNVLSELEKTFNLP
40 50 60 70 80 90
130 140 150 160 170 180
pF1KE5 VLEALFSDVNMQEYPDLIHIYKGFENVIHDKLPLQESEEEEREERSGLQLSLEQGTGENS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 VLEALFSDVNMQEYPDLIHIYKGFENVIHDKLPLQESEEEEREERSGLQLSLEQGTGENS
100 110 120 130 140 150
190 200 210 220 230 240
pF1KE5 FRSLTWPPSGSPSHAGTTPPENGLSEHPCETEQINAKRKDTTSDKDDSLGSQQTNEQCAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 FRSLTWPPSGSPSHAGTTPPENGLSEHPCETEQINAKRKDTTSDKDDSLGSQQTNEQCAQ
160 170 180 190 200 210
250 260 270 280 290 300
pF1KE5 KAEPTESCEQIAVQVNNGDAGREMPCPLPCDEESPEAELHNHGIQINSCSVRLVDIKKEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 KAEPTESCEQIAVQVNNGDAGREMPCPLPCDEESPEAELHNHGIQINSCSVRLVDIKKEK
220 230 240 250 260 270
310 320 330 340 350 360
pF1KE5 PFSNSKVECQAQARTHHNQASDIIVISSEDSEGSTDVDEPLEVFISAPRSEPVINNDNPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 PFSNSKVECQAQARTHHNQASDIIVISSEDSEGSTDVDEPLEVFISAPRSEPVINNDNPL
280 290 300 310 320 330
370 380 390 400 410 420
pF1KE5 ESNDEKEGQEATCSRPQIVPEPMDFRKLSTFRESFKKRVIGQDHDFSESSEEEAPAEASS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 ESNDEKEGQEATCSRPQIVPEPMDFRKLSTFRESFKKRVIGQDHDFSESSEEEAPAEASS
340 350 360 370 380 390
430 440 450 460 470 480
pF1KE5 GALRSKHGEKAPMTSRSTSTWRIPSRKRRFSSSDFSDLSNGEELQETCSSSLRRGSGKED
::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 GALRSKH---APMTSRSTSTWRIPSRKRRFSSSDFSDLSNGEELQETCSSSLRRGSGKED
400 410 420 430 440 450
>>CCDS46538.1 SP140L gene_id:93349|Hs108|chr2 (580 aa)
initn: 951 init1: 925 opt: 925 Z-score: 874.2 bits: 171.4 E(32554): 2.3e-42
Smith-Waterman score: 925; 80.6% identity (93.7% similar) in 175 aa overlap (1-175:1-175)
10 20 30 40 50 60
pF1KE5 MAGGGGDLSTRRLNECISPVANEMNHLPAHSHDLQRMFTEDQGVDDRLLYDIVFKHFKRN
:::::.::::: :: .: ::::::::::::..:::.::::: ::. :.:: :::::::.
CCDS46 MAGGGSDLSTRGLNGGVSQVANEMNHLPAHSQSLQRLFTEDQDVDEGLVYDTVFKHFKRH
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 KVEISNAIKKTFPFLEGLRDRDLITNKMFEDSQDSCRNLVPVQRVVYNVLSELEKTFNLP
:.:::::::::::::::::::.::::::::::.::::::::::::::::::::::::::
CCDS46 KLEISNAIKKTFPFLEGLRDRELITNKMFEDSEDSCRNLVPVQRVVYNVLSELEKTFNLS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 VLEALFSDVNMQEYPDLIHIYKGFENVIHDKLPLQESEEEEREERSGLQLSLEQGTGENS
:::::::.::::::::::::::.:.:.:.::: .:::...::::: ..:::.::
CCDS46 VLEALFSEVNMQEYPDLIHIYKSFKNAIQDKLSFQESDRKEREERPDIKLSLKQGEVPES
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 FRSLTWPPSGSPSHAGTTPPENGLSEHPCETEQINAKRKDTTSDKDDSLGSQQTNEQCAQ
CCDS46 PEARKESDQACGKMDTVDIANNSTLGKPKRKRRKKKGHGWSRMGTRTQKNNQQNDNSKAD
190 200 210 220 230 240
>>CCDS77537.1 SP140L gene_id:93349|Hs108|chr2 (520 aa)
initn: 779 init1: 753 opt: 754 Z-score: 714.4 bits: 141.7 E(32554): 1.8e-33
Smith-Waterman score: 754; 80.6% identity (94.4% similar) in 144 aa overlap (33-175:7-150)
10 20 30 40 50 60
pF1KE5 GGGGDLSTRRLNECISPVANEMNHLPAHSHDLQ-RMFTEDQGVDDRLLYDIVFKHFKRNK
::. :.::::: ::. :.:: :::::::.:
CCDS77 MAGGGSDLSTRLFTEDQDVDEGLVYDTVFKHFKRHK
10 20 30
70 80 90 100 110 120
pF1KE5 VEISNAIKKTFPFLEGLRDRDLITNKMFEDSQDSCRNLVPVQRVVYNVLSELEKTFNLPV
.:::::::::::::::::::.::::::::::.:::::::::::::::::::::::::: :
CCDS77 LEISNAIKKTFPFLEGLRDRELITNKMFEDSEDSCRNLVPVQRVVYNVLSELEKTFNLSV
40 50 60 70 80 90
130 140 150 160 170 180
pF1KE5 LEALFSDVNMQEYPDLIHIYKGFENVIHDKLPLQESEEEEREERSGLQLSLEQGTGENSF
::::::.::::::::::::::.:.:.:.::: .:::...::::: ..:::.::
CCDS77 LEALFSEVNMQEYPDLIHIYKSFKNAIQDKLSFQESDRKEREERPDIKLSLKQGEVPESP
100 110 120 130 140 150
190 200 210 220 230 240
pF1KE5 RSLTWPPSGSPSHAGTTPPENGLSEHPCETEQINAKRKDTTSDKDDSLGSQQTNEQCAQK
CCDS77 EARKESDQACGKMDTVDIANNSTLGKPKRKRRKKKGHGWSRMGTRTQKNNQQNDNSKADG
160 170 180 190 200 210
>>CCDS77536.1 SP140L gene_id:93349|Hs108|chr2 (555 aa)
initn: 779 init1: 753 opt: 754 Z-score: 714.0 bits: 141.7 E(32554): 1.9e-33
Smith-Waterman score: 754; 80.6% identity (94.4% similar) in 144 aa overlap (33-175:7-150)
10 20 30 40 50 60
pF1KE5 GGGGDLSTRRLNECISPVANEMNHLPAHSHDLQ-RMFTEDQGVDDRLLYDIVFKHFKRNK
::. :.::::: ::. :.:: :::::::.:
CCDS77 MAGGGSDLSTRLFTEDQDVDEGLVYDTVFKHFKRHK
10 20 30
70 80 90 100 110 120
pF1KE5 VEISNAIKKTFPFLEGLRDRDLITNKMFEDSQDSCRNLVPVQRVVYNVLSELEKTFNLPV
.:::::::::::::::::::.::::::::::.:::::::::::::::::::::::::: :
CCDS77 LEISNAIKKTFPFLEGLRDRELITNKMFEDSEDSCRNLVPVQRVVYNVLSELEKTFNLSV
40 50 60 70 80 90
130 140 150 160 170 180
pF1KE5 LEALFSDVNMQEYPDLIHIYKGFENVIHDKLPLQESEEEEREERSGLQLSLEQGTGENSF
::::::.::::::::::::::.:.:.:.::: .:::...::::: ..:::.::
CCDS77 LEALFSEVNMQEYPDLIHIYKSFKNAIQDKLSFQESDRKEREERPDIKLSLKQGEVPESP
100 110 120 130 140 150
190 200 210 220 230 240
pF1KE5 RSLTWPPSGSPSHAGTTPPENGLSEHPCETEQINAKRKDTTSDKDDSLGSQQTNEQCAQK
CCDS77 EARKESDQACGKMDTVDIANNSTLGKPKRKRRKKKGHGWSRMGTRTQKNNQQNDNSKADG
160 170 180 190 200 210
>>CCDS63149.1 SP140 gene_id:11262|Hs108|chr2 (753 aa)
initn: 556 init1: 406 opt: 477 Z-score: 452.0 bits: 93.7 E(32554): 7.4e-19
Smith-Waterman score: 496; 30.8% identity (58.3% similar) in 451 aa overlap (40-454:29-449)
10 20 30 40 50 60
pF1KE5 TRRLNECISPVANEMNHLPAHSHDLQRMFTEDQGVDDRLLYDIVFKHFKRNKVEISNAIK
: :...... . .:. :..:::::..::
CCDS63 MAQQGQQGQMASGDSNLNFRMVAEIQNVEGQNLQEQVCPEPIFRFFRENKVEIASAIT
10 20 30 40 50
70 80 90 100 110 120
pF1KE5 KTFPFLEGLRDRDLITNKMFEDSQDSCRNLVPVQRVVYNVLSELEKTFNLPVLEALFSDV
. :::: :::::..:...:.: :.. :::::: ::.: :::::::::. :::::: .
CCDS63 RPFPFLMGLRDRSFISEQMYEHFQEAFRNLVPVTRVMYCVLSELEKTFGWSHLEALFSRI
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE5 NMQEYPDLIHIYKGFENVIHDKLPLQESEEEEREERSGLQLSLEQGTGENSFRSLTWPPS
:.. :::: .::..:.:: ... ::: .. .. :.: : : : :::
CCDS63 NLMAYPDLNEIYRSFQNVCYEHSPLQMNNVNDLEDRPRL---LPYGKQENSNACHEMDDI
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE5 GSPSHAGTTPP--ENGLSEHPCETEQINAKRKDTTSDKDDSLGSQQTNEQCAQKAEPTES
. :..: .. : : :.: . :: :. : : .: .: : . :. :
CCDS63 AVPQEALSSSPRCEPGFSSESCE--QL-ALPKAGGGDAED-----------APSLLPV-S
180 190 200 210 220
250 260 270 280 290 300
pF1KE5 CEQIAVQVNNGDAGREMPCPLPCDEESP----EAELHNHG-IQINSCSVRLVDIKKEKPF
: ..:.:...:.. .::: :: : : .. :.: . . : :. . :.
CCDS63 C-KLAIQIDEGES-EEMPKLLPYDTEETFDLKTPQVTNEGEPEKGLC---LLPGEGEEGS
230 240 250 260 270
310 320 330 340 350
pF1KE5 SNSKVECQAQARTHHNQASDIIV----ISSE------DSEGSTDVDEPLEVFISAPRSEP
.. . :... : ..::. .. .::: . :: .. .. ..: .:
CCDS63 DDCSEMCDGEER---QEASSSLARRGSVSSELENHPMNEEGESEELASSLLYDNVPGAEQ
280 290 300 310 320 330
360 370 380 390 400
pF1KE5 VINNDNP----LESNDEKEGQ-EATCSRPQIVP--EPMDFRKLSTFRESFKKRVIGQDHD
... . ..: :. :: : . .:. . ::. . .:: . :
CCDS63 SAYENEKCSCVMCFSEEVPGSPEARTESDQACGTMDTVDIANNSTLGKPKRKRRKKRGHG
340 350 360 370 380 390
410 420 430 440 450
pF1KE5 FS-------ESSEEEAPAEASSGALRSKHGEKAPMTSRSTSTWRIPSRKR-----RFSSS
.: :.:... ..:.. .. :. .:: .. .. : .: .::: ::..:
CCDS63 WSRMRMRRQENSQQNDNSKADGQVVSSE--KKANVNLKDLS--KIRGRKRGKPGTRFTQS
400 410 420 430 440
460 470 480
pF1KE5 DFSDLSNGEELQETCSSSLRRGSGKED
:
CCDS63 DRAAQKRVRSRASRKHKDETVDFKAPLLPVTCGGVKGILHKKKLQQGILVKCIQTEDGKW
450 460 470 480 490 500
480 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 05:30:10 2016 done: Tue Nov 8 05:30:11 2016
Total Scan time: 3.070 Total Display time: 0.050
Function used was FASTA [36.3.4 Apr, 2011]