FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE5644, 477 aa
  1>>>pF1KE5644 477 - 477 aa - 477 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 6.8001+/-0.000849; mu= 12.1654+/- 0.051
 mean_var=120.5636+/-23.214, 0's: 0 Z-trim(110.8): 24  B-trim: 0 in 0/51
 Lambda= 0.116806
 statistics sampled from 11865 (11888) to 11865 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.729), E-opt: 0.2 (0.365), width:  16
 Scan time:  2.520

The best scores are:                                      opt bits E(32554)
CCDS43623.1 ZCWPW1 gene_id:55063|Hs108|chr7        ( 648) 2522 436.1 5.5e-122
CCDS59067.1 ZCWPW1 gene_id:55063|Hs108|chr7        ( 524) 2418 418.5 8.7e-117


>>CCDS43623.1 ZCWPW1 gene_id:55063|Hs108|chr7             (648 aa)
 initn: 1974 init1: 1974 opt: 2522  Z-score: 2303.6  bits: 436.1 E(32554): 5.5e-122
Smith-Waterman score: 2980; 89.4% identity (89.8% similar) in 509 aa overlap (1-458:122-629)

                                             10        20        30
pF1KE5                               MGSGLDFAETSCAQPVVSTQSDKEPGITAS
                                     ::::::::::::::::::::::::::::::
CCDS43 KEKEKSSLTNAEFEEIVQIVLQKSLQECLGMGSGLDFAETSCAQPVVSTQSDKEPGITAS
             100       110       120       130       140       150 

               40        50        60        70        80        90
pF1KE5 AADTDNANGEEVPHTQEISVSWEGEAAPEIRTSKLGQPDPAPSKKKSNRLTLSKRKKEAQ
       :.:::::::::::::::::::::::::::::::::::::::::::::::::::::::::.
CCDS43 ATDTDNANGEEVPHTQEISVSWEGEAAPEIRTSKLGQPDPAPSKKKSNRLTLSKRKKEAH
             160       170       180       190       200       210 

              100       110       120       130       140       150
pF1KE5 DEKVEKTQGGHEHRQEDRLKKTVQDHSQIRDQQKGEISGFGQCLVWVQCSFPNCGKWRRL
        :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 -EKVEKTQGGHEHRQEDRLKKTVQDHSQIRDQQKGEISGFGQCLVWVQCSFPNCGKWRRL
              220       230       240       250       260       270

              160       170       180       190       200       210
pF1KE5 CGNIDPSVLPDNWSCDQNTDVQYNRCDIPEETWTGLESDVAYASYIPGSIIWAKQYGYPW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 CGNIDPSVLPDNWSCDQNTDVQYNRCDIPEETWTGLESDVAYASYIPGSIIWAKQYGYPW
              280       290       300       310       320       330

              220       230       240       250       260       270
pF1KE5 WPGMIESDPDLGEYFLFTSHLDSLPSKYHVTFFGETVSRAWIPVNMLKNFQELSLELSVM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 WPGMIESDPDLGEYFLFTSHLDSLPSKYHVTFFGETVSRAWIPVNMLKNFQELSLELSVM
              340       350       360       370       380       390

              280       290       300       310       320       330
pF1KE5 KKRRNDCSQKLGVALMMAQEAEQISIQERVNLFGFWSRFNGSNSNGERKDLQLSGLNSPG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 KKRRNDCSQKLGVALMMAQEAEQISIQERVNLFGFWSRFNGSNSNGERKDLQLSGLNSPG
              400       410       420       430       440       450

              340       350       360       370                    
pF1KE5 SCLEKKEKEEELEKEEGEKTDPILPIRKRVKIQTQKTKPRG-------------------
       :::::::::::::::::::::::::::::::::::::::::                   
CCDS43 SCLEKKEKEEELEKEEGEKTDPILPIRKRVKIQTQKTKPRGLGGDAGTADGRGRTLQRKI
              460       470       480       490       500       510

                                             380       390         
pF1KE5 --------------------------------PKKKFKAPQSKALAASFSEGKEVRTVPK
                                       ::::::::::::::::::::::::::::
CCDS43 MKRSLGRKSTAPPAPRMGRKEGQGNSDSDQPGPKKKFKAPQSKALAASFSEGKEVRTVPK
              520       530       540       550       560       570

     400       410       420       430       440       450         
pF1KE5 NLGLSACKGACPSSAKEEPRHREPLTQEAGSVPLEDEASSDLDLEQLMEDVGRELGQSGE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: 
CCDS43 NLGLSACKGACPSSAKEEPRHREPLTQEAGSVPLEDEASSDLDLEQLMEDVGRELGQSGE
              580       590       600       610       620       630

     460       470       
pF1KE5 LQHSNSDGEDFPVALFGK
                         
CCDS43 LQHSNSDGEDFPVALFGK
              640        

>>CCDS59067.1 ZCWPW1 gene_id:55063|Hs108|chr7             (524 aa)
 initn: 2408 init1: 2408 opt: 2418  Z-score: 2210.2  bits: 418.5 E(32554): 8.7e-117
Smith-Waterman score: 2420; 85.3% identity (90.1% similar) in 423 aa overlap (1-423:122-524)

                                             10        20        30
pF1KE5                               MGSGLDFAETSCAQPVVSTQSDKEPGITAS
                                     ::::::::::::::::::::::::::::::
CCDS59 KEKEKSSLTNAEFEEIVQIVLQKSLQECLGMGSGLDFAETSCAQPVVSTQSDKEPGITAS
             100       110       120       130       140       150 

               40        50        60        70        80        90
pF1KE5 AADTDNANGEEVPHTQEISVSWEGEAAPEIRTSKLGQPDPAPSKKKSNRLTLSKRKKEAQ
       :.::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 ATDTDNANGEEVPHTQEISVSWEGEAAPEIRTSKLGQPDPAPSKKKSNRLTLSKRKKEAQ
             160       170       180       190       200       210 

              100       110       120       130       140       150
pF1KE5 DEKVEKTQGGHEHRQEDRLKKTVQDHSQIRDQQKGEISGFGQCLVWVQCSFPNCGKWRRL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 DEKVEKTQGGHEHRQEDRLKKTVQDHSQIRDQQKGEISGFGQCLVWVQCSFPNCGKWRRL
             220       230       240       250       260       270 

              160       170       180       190       200       210
pF1KE5 CGNIDPSVLPDNWSCDQNTDVQYNRCDIPEETWTGLESDVAYASYIPGSIIWAKQYGYPW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 CGNIDPSVLPDNWSCDQNTDVQYNRCDIPEETWTGLESDVAYASYIPGSIIWAKQYGYPW
             280       290       300       310       320       330 

              220       230       240       250       260       270
pF1KE5 WPGMIESDPDLGEYFLFTSHLDSLPSKYHVTFFGETVSRAWIPVNMLKNFQELSLELSVM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 WPGMIESDPDLGEYFLFTSHLDSLPSKYHVTFFGETVSRAWIPVNMLKNFQELSLELSVM
             340       350       360       370       380       390 

              280       290       300       310       320       330
pF1KE5 KKRRNDCSQKLGVALMMAQEAEQISIQERVNLFGFWSRFNGSNSNGERKDLQLSGLNSPG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 KKRRNDCSQKLGVALMMAQEAEQISIQERVNLFGFWSRFNGSNSNGERKDLQLSGLNSPG
             400       410       420       430       440       450 

              340       350       360       370       380       390
pF1KE5 SCLEKKEKEEELEKEEGEKTDPILPIRKRVKIQTQKTKPRGPKKKFKAPQSKALAASFSE
       ::::::::::::::::::::     .:: .:.   ...:  :              .:..
CCDS59 SCLEKKEKEEELEKEEGEKT----ALRKNLKLP--RARPWQP--------------AFQR
             460       470           480                       490 

              400       410       420       430       440       450
pF1KE5 GKEVRTVPKNLGLSACKGACPSSAKEEPRHREPLTQEAGSVPLEDEASSDLDLEQLMEDV
        :...   .. . .  .:  :   :. :   .:                           
CCDS59 EKKLEQCQRTWAYQRVRGPAPHLRKKSPDTGNP                           
             500       510       520                               

              460       470       
pF1KE5 GRELGQSGELQHSNSDGEDFPVALFGK




477 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Tue Nov  8 05:29:39 2016 done: Tue Nov  8 05:29:39 2016
 Total Scan time:  2.520 Total Display time:  0.000

Function used was FASTA [36.3.4 Apr, 2011]