Result of FASTA (ccds) for
pFN21AE5638
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE5638, 547 aa
1>>>pF1KE5638 547 - 547 aa - 547 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 10.4744+/-0.000992; mu= -3.1058+/- 0.060
mean_var=262.2046+/-52.390, 0's: 0 Z-trim(114.2): 27 B-trim: 44 in 1/51
Lambda= 0.079205
statistics sampled from 14725 (14747) to 14725 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.76), E-opt: 0.2 (0.453), width: 16
Scan time: 4.120
The best scores are: opt bits E(32554)
CCDS2476.1 SP110 gene_id:3431|Hs108|chr2 ( 549) 3610 425.5 8e-119
CCDS54435.1 SP110 gene_id:3431|Hs108|chr2 ( 555) 3610 425.5 8.1e-119
CCDS2474.1 SP110 gene_id:3431|Hs108|chr2 ( 689) 3483 411.0 2.3e-114
CCDS2475.1 SP110 gene_id:3431|Hs108|chr2 ( 713) 3483 411.0 2.3e-114
CCDS63149.1 SP140 gene_id:11262|Hs108|chr2 ( 753) 494 69.5 1.6e-11
>>CCDS2476.1 SP110 gene_id:3431|Hs108|chr2 (549 aa)
initn: 2182 init1: 1979 opt: 3610 Z-score: 2246.7 bits: 425.5 E(32554): 8e-119
Smith-Waterman score: 3610; 98.9% identity (98.9% similar) in 549 aa overlap (1-547:1-549)
10 20 30 40 50 60
pF1KE5 MFTMTRAMEEALFQHFMHQKLGIAYAIHKPFPFFEGLLDNSIITKRMYMESLEACRNLIP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 MFTMTRAMEEALFQHFMHQKLGIAYAIHKPFPFFEGLLDNSIITKRMYMESLEACRNLIP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 VSRVVHNILTQLERTFNLSLLVTLFSQINLREYPNLVTIYRSFKRVGASYERQSRDTPIL
::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::
CCDS24 VSRVVHNILTQLERTFNLSLLVTLFSQINLREYPNLVTIYRSFKRVGASYEWQSRDTPIL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 LEAPTGLAEGSSLHTPLALPPPQPPQPSCSPCAPRVSEPGTSSQQSDEILSESPSPSDPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 LEAPTGLAEGSSLHTPLALPPPQPPQPSCSPCAPRVSEPGTSSQQSDEILSESPSPSDPV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 LPLPALIQEGRSTSVTNDKLTSKMNAEEDSEEMPSLLTSTVQVASDNLIPQIRDKEDPQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 LPLPALIQEGRSTSVTNDKLTSKMNAEEDSEEMPSLLTSTVQVASDNLIPQIRDKEDPQE
190 200 210 220 230 240
250 260 270 280 290
pF1KE5 MPHSPLGSMPEIRDNSPEPNDPEEPQEVSSTPSDKKGKKRKRCIWSTPKRRHKKKSLP--
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 MPHSPLGSMPEIRDNSPEPNDPEEPQEVSSTPSDKKGKKRKRCIWSTPKRRHKKKSLPGG
250 260 270 280 290 300
300 310 320 330 340 350
pF1KE5 RALSRHGIQKKLKRVDQVPQKKDDSTCNSTVETRAQKARTECARKSRSEEIIDGTSEMNE
: :::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 TASSRHGIQKKLKRVDQVPQKKDDSTCNSTVETRAQKARTECARKSRSEEIIDGTSEMNE
310 320 330 340 350 360
360 370 380 390 400 410
pF1KE5 GKRSQKTPSTPRRVTQGAASPGHGIQEKLQVVDKVTQRKDDSTWNSEVMMRVQKARTKCA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 GKRSQKTPSTPRRVTQGAASPGHGIQEKLQVVDKVTQRKDDSTWNSEVMMRVQKARTKCA
370 380 390 400 410 420
420 430 440 450 460 470
pF1KE5 RKSRSKEKKKEKDICSSSKRRFQKNIHRRGKPKSDTVDFHCSKLPVTCGEAKGILYKKKM
:::: :::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 RKSRLKEKKKEKDICSSSKRRFQKNIHRRGKPKSDTVDFHCSKLPVTCGEAKGILYKKKM
430 440 450 460 470 480
480 490 500 510 520 530
pF1KE5 KHGSSVKCIRNEDGTWLTPNEFEVEGKGRNAKNWKRNIRCEGMTLGELLKSGLLLCPPRI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 KHGSSVKCIRNEDGTWLTPNEFEVEGKGRNAKNWKRNIRCEGMTLGELLKSGLLLCPPRI
490 500 510 520 530 540
540
pF1KE5 NLKRELNSK
:::::::::
CCDS24 NLKRELNSK
>>CCDS54435.1 SP110 gene_id:3431|Hs108|chr2 (555 aa)
initn: 2182 init1: 1979 opt: 3610 Z-score: 2246.6 bits: 425.5 E(32554): 8.1e-119
Smith-Waterman score: 3610; 98.9% identity (98.9% similar) in 549 aa overlap (1-547:7-555)
10 20 30 40 50
pF1KE5 MFTMTRAMEEALFQHFMHQKLGIAYAIHKPFPFFEGLLDNSIITKRMYMESLEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 MGRGFRMFTMTRAMEEALFQHFMHQKLGIAYAIHKPFPFFEGLLDNSIITKRMYMESLEA
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE5 CRNLIPVSRVVHNILTQLERTFNLSLLVTLFSQINLREYPNLVTIYRSFKRVGASYERQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::
CCDS54 CRNLIPVSRVVHNILTQLERTFNLSLLVTLFSQINLREYPNLVTIYRSFKRVGASYEWQS
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE5 RDTPILLEAPTGLAEGSSLHTPLALPPPQPPQPSCSPCAPRVSEPGTSSQQSDEILSESP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 RDTPILLEAPTGLAEGSSLHTPLALPPPQPPQPSCSPCAPRVSEPGTSSQQSDEILSESP
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE5 SPSDPVLPLPALIQEGRSTSVTNDKLTSKMNAEEDSEEMPSLLTSTVQVASDNLIPQIRD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 SPSDPVLPLPALIQEGRSTSVTNDKLTSKMNAEEDSEEMPSLLTSTVQVASDNLIPQIRD
190 200 210 220 230 240
240 250 260 270 280 290
pF1KE5 KEDPQEMPHSPLGSMPEIRDNSPEPNDPEEPQEVSSTPSDKKGKKRKRCIWSTPKRRHKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 KEDPQEMPHSPLGSMPEIRDNSPEPNDPEEPQEVSSTPSDKKGKKRKRCIWSTPKRRHKK
250 260 270 280 290 300
300 310 320 330 340 350
pF1KE5 KSLP--RALSRHGIQKKLKRVDQVPQKKDDSTCNSTVETRAQKARTECARKSRSEEIIDG
:::: : :::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 KSLPGGTASSRHGIQKKLKRVDQVPQKKDDSTCNSTVETRAQKARTECARKSRSEEIIDG
310 320 330 340 350 360
360 370 380 390 400 410
pF1KE5 TSEMNEGKRSQKTPSTPRRVTQGAASPGHGIQEKLQVVDKVTQRKDDSTWNSEVMMRVQK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 TSEMNEGKRSQKTPSTPRRVTQGAASPGHGIQEKLQVVDKVTQRKDDSTWNSEVMMRVQK
370 380 390 400 410 420
420 430 440 450 460 470
pF1KE5 ARTKCARKSRSKEKKKEKDICSSSKRRFQKNIHRRGKPKSDTVDFHCSKLPVTCGEAKGI
:::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 ARTKCARKSRLKEKKKEKDICSSSKRRFQKNIHRRGKPKSDTVDFHCSKLPVTCGEAKGI
430 440 450 460 470 480
480 490 500 510 520 530
pF1KE5 LYKKKMKHGSSVKCIRNEDGTWLTPNEFEVEGKGRNAKNWKRNIRCEGMTLGELLKSGLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 LYKKKMKHGSSVKCIRNEDGTWLTPNEFEVEGKGRNAKNWKRNIRCEGMTLGELLKSGLL
490 500 510 520 530 540
540
pF1KE5 LCPPRINLKRELNSK
:::::::::::::::
CCDS54 LCPPRINLKRELNSK
550
>>CCDS2474.1 SP110 gene_id:3431|Hs108|chr2 (689 aa)
initn: 2182 init1: 1979 opt: 3483 Z-score: 2166.8 bits: 411.0 E(32554): 2.3e-114
Smith-Waterman score: 3483; 98.9% identity (98.9% similar) in 530 aa overlap (1-528:1-530)
10 20 30 40 50 60
pF1KE5 MFTMTRAMEEALFQHFMHQKLGIAYAIHKPFPFFEGLLDNSIITKRMYMESLEACRNLIP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 MFTMTRAMEEALFQHFMHQKLGIAYAIHKPFPFFEGLLDNSIITKRMYMESLEACRNLIP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 VSRVVHNILTQLERTFNLSLLVTLFSQINLREYPNLVTIYRSFKRVGASYERQSRDTPIL
::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::
CCDS24 VSRVVHNILTQLERTFNLSLLVTLFSQINLREYPNLVTIYRSFKRVGASYEWQSRDTPIL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 LEAPTGLAEGSSLHTPLALPPPQPPQPSCSPCAPRVSEPGTSSQQSDEILSESPSPSDPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 LEAPTGLAEGSSLHTPLALPPPQPPQPSCSPCAPRVSEPGTSSQQSDEILSESPSPSDPV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 LPLPALIQEGRSTSVTNDKLTSKMNAEEDSEEMPSLLTSTVQVASDNLIPQIRDKEDPQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 LPLPALIQEGRSTSVTNDKLTSKMNAEEDSEEMPSLLTSTVQVASDNLIPQIRDKEDPQE
190 200 210 220 230 240
250 260 270 280 290
pF1KE5 MPHSPLGSMPEIRDNSPEPNDPEEPQEVSSTPSDKKGKKRKRCIWSTPKRRHKKKSLP--
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 MPHSPLGSMPEIRDNSPEPNDPEEPQEVSSTPSDKKGKKRKRCIWSTPKRRHKKKSLPGG
250 260 270 280 290 300
300 310 320 330 340 350
pF1KE5 RALSRHGIQKKLKRVDQVPQKKDDSTCNSTVETRAQKARTECARKSRSEEIIDGTSEMNE
: :::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 TASSRHGIQKKLKRVDQVPQKKDDSTCNSTVETRAQKARTECARKSRSEEIIDGTSEMNE
310 320 330 340 350 360
360 370 380 390 400 410
pF1KE5 GKRSQKTPSTPRRVTQGAASPGHGIQEKLQVVDKVTQRKDDSTWNSEVMMRVQKARTKCA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 GKRSQKTPSTPRRVTQGAASPGHGIQEKLQVVDKVTQRKDDSTWNSEVMMRVQKARTKCA
370 380 390 400 410 420
420 430 440 450 460 470
pF1KE5 RKSRSKEKKKEKDICSSSKRRFQKNIHRRGKPKSDTVDFHCSKLPVTCGEAKGILYKKKM
:::: :::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 RKSRLKEKKKEKDICSSSKRRFQKNIHRRGKPKSDTVDFHCSKLPVTCGEAKGILYKKKM
430 440 450 460 470 480
480 490 500 510 520 530
pF1KE5 KHGSSVKCIRNEDGTWLTPNEFEVEGKGRNAKNWKRNIRCEGMTLGELLKSGLLLCPPRI
::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 KHGSSVKCIRNEDGTWLTPNEFEVEGKGRNAKNWKRNIRCEGMTLGELLKRKNSDECEVC
490 500 510 520 530 540
540
pF1KE5 NLKRELNSK
CCDS24 CQGGQLLCCGTCPRVFHEDCHIPPVEAKRMLWSCTFCRMKRSSGSQQCHHVSKTLERQMQ
550 560 570 580 590 600
>>CCDS2475.1 SP110 gene_id:3431|Hs108|chr2 (713 aa)
initn: 2182 init1: 1979 opt: 3483 Z-score: 2166.6 bits: 411.0 E(32554): 2.3e-114
Smith-Waterman score: 3483; 98.9% identity (98.9% similar) in 530 aa overlap (1-528:1-530)
10 20 30 40 50 60
pF1KE5 MFTMTRAMEEALFQHFMHQKLGIAYAIHKPFPFFEGLLDNSIITKRMYMESLEACRNLIP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 MFTMTRAMEEALFQHFMHQKLGIAYAIHKPFPFFEGLLDNSIITKRMYMESLEACRNLIP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 VSRVVHNILTQLERTFNLSLLVTLFSQINLREYPNLVTIYRSFKRVGASYERQSRDTPIL
::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::
CCDS24 VSRVVHNILTQLERTFNLSLLVTLFSQINLREYPNLVTIYRSFKRVGASYEWQSRDTPIL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 LEAPTGLAEGSSLHTPLALPPPQPPQPSCSPCAPRVSEPGTSSQQSDEILSESPSPSDPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 LEAPTGLAEGSSLHTPLALPPPQPPQPSCSPCAPRVSEPGTSSQQSDEILSESPSPSDPV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 LPLPALIQEGRSTSVTNDKLTSKMNAEEDSEEMPSLLTSTVQVASDNLIPQIRDKEDPQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 LPLPALIQEGRSTSVTNDKLTSKMNAEEDSEEMPSLLTSTVQVASDNLIPQIRDKEDPQE
190 200 210 220 230 240
250 260 270 280 290
pF1KE5 MPHSPLGSMPEIRDNSPEPNDPEEPQEVSSTPSDKKGKKRKRCIWSTPKRRHKKKSLP--
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 MPHSPLGSMPEIRDNSPEPNDPEEPQEVSSTPSDKKGKKRKRCIWSTPKRRHKKKSLPGG
250 260 270 280 290 300
300 310 320 330 340 350
pF1KE5 RALSRHGIQKKLKRVDQVPQKKDDSTCNSTVETRAQKARTECARKSRSEEIIDGTSEMNE
: :::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 TASSRHGIQKKLKRVDQVPQKKDDSTCNSTVETRAQKARTECARKSRSEEIIDGTSEMNE
310 320 330 340 350 360
360 370 380 390 400 410
pF1KE5 GKRSQKTPSTPRRVTQGAASPGHGIQEKLQVVDKVTQRKDDSTWNSEVMMRVQKARTKCA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 GKRSQKTPSTPRRVTQGAASPGHGIQEKLQVVDKVTQRKDDSTWNSEVMMRVQKARTKCA
370 380 390 400 410 420
420 430 440 450 460 470
pF1KE5 RKSRSKEKKKEKDICSSSKRRFQKNIHRRGKPKSDTVDFHCSKLPVTCGEAKGILYKKKM
:::: :::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 RKSRLKEKKKEKDICSSSKRRFQKNIHRRGKPKSDTVDFHCSKLPVTCGEAKGILYKKKM
430 440 450 460 470 480
480 490 500 510 520 530
pF1KE5 KHGSSVKCIRNEDGTWLTPNEFEVEGKGRNAKNWKRNIRCEGMTLGELLKSGLLLCPPRI
::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 KHGSSVKCIRNEDGTWLTPNEFEVEGKGRNAKNWKRNIRCEGMTLGELLKRKNSDECEVC
490 500 510 520 530 540
540
pF1KE5 NLKRELNSK
CCDS24 CQGGQLLCCGTCPRVFHEDCHIPPVEAKRMLWSCTFCRMKRSSGSQQCHHVSKTLERQMQ
550 560 570 580 590 600
>>CCDS63149.1 SP140 gene_id:11262|Hs108|chr2 (753 aa)
initn: 755 init1: 333 opt: 494 Z-score: 320.3 bits: 69.5 E(32554): 1.6e-11
Smith-Waterman score: 813; 32.7% identity (58.4% similar) in 548 aa overlap (10-543:40-557)
10 20 30
pF1KE5 MFTMTRAMEEALFQHFMHQKLGIAYAIHKPFPFFEGLLD
: .:. : ..:. :: :: .::::. :: :
CCDS63 MASGDSNLNFRMVAEIQNVEGQNLQEQVCPEPIFRFFRENKVEIASAITRPFPFLMGLRD
10 20 30 40 50 60
40 50 60 70 80 90
pF1KE5 NSIITKRMYMESLEACRNLIPVSRVVHNILTQLERTFNLSLLVTLFSQINLREYPNLVTI
:.:...:: . :: :::.::.::.. .:..::.::. : : .:::.::: ::.: :
CCDS63 RSFISEQMYEHFQEAFRNLVPVTRVMYCVLSELEKTFGWSHLEALFSRINLMAYPDLNEI
70 80 90 100 110 120
100 110 120 130 140
pF1KE5 YRSFKRVGASYERQS---------RDTPILLEAPTGLAEGSSL-HTPLALPPPQPPQPSC
::::. : ::.. .: : :: : : :.:. : . :: :
CCDS63 YRSFQNV--CYEHSPLQMNNVNDLEDRPRLL--PYGKQENSNACHEMDDIAVPQEALSSS
130 140 150 160 170 180
150 160 170 180 190 200
pF1KE5 SPCAPRVSEPGTSSQQSDEILSESPSPSDPVLPLPALIQEGRSTSVTNDKLTSKMNAEED
: ::: ::.. ... . . .: . :.:. . . .. : : .
CCDS63 PRC-----EPGFSSESCEQLALPKAGGGD-AEDAPSLLPVSCKLAIQID--------EGE
190 200 210 220 230
210 220 230 240 250 260
pF1KE5 SEEMPSLLTSTVQVASDNLIPQIRDKEDPQEMPHSPLGSMPEIRDNSPEPNDPEEPQEVS
:::::.:: .. . : ::. .. .:.. : : :. : : :: ::.:
CCDS63 SEEMPKLLPYDTEETFDLKTPQVTNEGEPEKGLCLLPGEGEEGSDDCSEMCDGEERQEAS
240 250 260 270 280 290
270 280 290 300 310 320
pF1KE5 STPSDKKGKKRKRCIWSTPKRRHKKKSLPRALSRHGIQKKLKRVDQVPQKKDDSTCNSTV
:. . ..:. .. ... ... : .: .. . . . .: . : :
CCDS63 SSLA-RRGSVSSELENHPMNEEGESEELASSLLYDNVPGAEQSAYE-NEKCSCVMCFSEE
300 310 320 330 340
330 340 350 360 370 380
pF1KE5 ETRAQKARTECARKSRSEEIIDGTSEMNEGKRSQKTPSTPRRVTQGAASPGHGIQEKLQV
. .:::: . . . .: ... . :: :. :: .: :: .. .
CCDS63 VPGSPEARTESDQACGTMDTVDIANNSTLGK-----PKRKRRKKRG-----HGWSRMRMR
350 360 370 380 390
390 400 410 420 430 440
pF1KE5 VDKVTQRKDDSTWNSEVMMRVQKART--KCARKSRSKEKKKEKDICSSSKRRFQKNIHRR
.. .:..:.: ...:. .:: . : : :.... : ..: : :: .. :
CCDS63 RQENSQQNDNSKADGQVVSSEKKANVNLKDLSKIRGRKRGKPGTRFTQSDRAAQKRVRSR
400 410 420 430 440 450
450 460 470 480 490 500
pF1KE5 G--KPKSDTVDFHCSKLPVTCGEAKGILYKKKMKHGSSVKCIRNEDGTWLTPNEFEVEGK
. : :..::::. :::::: .::::.:::...: ::::..::: :.::.:::..:
CCDS63 ASRKHKDETVDFKAPLLPVTCGGVKGILHKKKLQQGILVKCIQTEDGKWFTPTEFEIKGG
460 470 480 490 500 510
510 520 530 540
pF1KE5 GRNAKNWKRNIRCEGMTLGELLKSGLLLCPPRINLKRELNSK
.:::. ..:: : : :...:.: :::: ...
CCDS63 HARSKNWRLSVRCGGWPLRWLMENGFLPDPPRIRYRKKKRILKSQNNSSVDPCMRNLDEC
520 530 540 550 560 570
CCDS63 EVCRDGGELFCCDTCSRVFHEDCHIPPVEAERTPWNCIFCRMKESPGSQQCCQESEVLER
580 590 600 610 620 630
547 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 05:25:50 2016 done: Tue Nov 8 05:25:51 2016
Total Scan time: 4.120 Total Display time: 0.060
Function used was FASTA [36.3.4 Apr, 2011]