FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE5634, 584 aa
  1>>>pF1KE5634 584 - 584 aa - 584 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 8.6322+/-0.000949; mu= 4.8541+/- 0.057
 mean_var=186.1242+/-36.852, 0's: 0 Z-trim(112.0): 25  B-trim: 0 in 0/53
 Lambda= 0.094010
 statistics sampled from 12850 (12862) to 12850 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.727), E-opt: 0.2 (0.395), width:  16
 Scan time:  2.610

The best scores are:                                      opt bits E(32554)
CCDS13444.1 BCAS1 gene_id:8537|Hs108|chr20         ( 584) 3826 531.3 1.2e-150
CCDS82631.1 BCAS1 gene_id:8537|Hs108|chr20         ( 506) 2609 366.2 5.4e-101


>>CCDS13444.1 BCAS1 gene_id:8537|Hs108|chr20              (584 aa)
 initn: 3826 init1: 3826 opt: 3826  Z-score: 2817.8  bits: 531.3 E(32554): 1.2e-150
Smith-Waterman score: 3826; 100.0% identity (100.0% similar) in 584 aa overlap (1-584:1-584)

               10        20        30        40        50        60
pF1KE5 MGNQMSVPQRVEDQENEPEAETYQDNASALNGVPVVVSTHTVQHLEEVDLGISVKTDNVA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 MGNQMSVPQRVEDQENEPEAETYQDNASALNGVPVVVSTHTVQHLEEVDLGISVKTDNVA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE5 TSSPETTEISAVADANGKNLGKEAKPEAPAAKSRFFLMLSRPVPGRTGDQAADSSLGSVK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 TSSPETTEISAVADANGKNLGKEAKPEAPAAKSRFFLMLSRPVPGRTGDQAADSSLGSVK
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE5 LDVSSNKAPANKDPSESWTLPVAAGPGQDTDKTPGHAPAQDKVLSAARDPTLLPPETGGA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 LDVSSNKAPANKDPSESWTLPVAAGPGQDTDKTPGHAPAQDKVLSAARDPTLLPPETGGA
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE5 GGEAPSKPKDSSFFDKFFKLDKGQEKVPGDSQQEAKRAEHQDKVDEVPGLSGQSDDVPAG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 GGEAPSKPKDSSFFDKFFKLDKGQEKVPGDSQQEAKRAEHQDKVDEVPGLSGQSDDVPAG
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE5 KDIVDGKEKEGQELGTADCSVPGDPEGLETAKDDSQAAAIAENNNSIMSFFKTLVSPNKA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 KDIVDGKEKEGQELGTADCSVPGDPEGLETAKDDSQAAAIAENNNSIMSFFKTLVSPNKA
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE5 ETKKDPEDTGAEKSPTTSADLKSDKANFTSQETQGAGKNSKGCNPSGHTQSVTTPEPAKE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 ETKKDPEDTGAEKSPTTSADLKSDKANFTSQETQGAGKNSKGCNPSGHTQSVTTPEPAKE
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KE5 GTKEKSGPTSLPLGKLFWKKSVKEDSVPTGAEENVVCESPVEIIKSKEVESALQTVDLNE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 GTKEKSGPTSLPLGKLFWKKSVKEDSVPTGAEENVVCESPVEIIKSKEVESALQTVDLNE
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KE5 GDAAPEPTEAKLKREESKPRTSLMAFLRQMSVKGDGGITHSEEINGKDSSCQTSDSTEKT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 GDAAPEPTEAKLKREESKPRTSLMAFLRQMSVKGDGGITHSEEINGKDSSCQTSDSTEKT
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KE5 ITPPEPEPTGAPQKGKEGSSKDKKSAAEMNKQKSNKQEAKEPAQCTEQATVDTNSLQNGD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 ITPPEPEPTGAPQKGKEGSSKDKKSAAEMNKQKSNKQEAKEPAQCTEQATVDTNSLQNGD
              490       500       510       520       530       540

              550       560       570       580    
pF1KE5 KLQKRPEKRQQSLGGFFKGLGPKRMLDAQVQTDPVSIGPVGKSK
       ::::::::::::::::::::::::::::::::::::::::::::
CCDS13 KLQKRPEKRQQSLGGFFKGLGPKRMLDAQVQTDPVSIGPVGKSK
              550       560       570       580    

>>CCDS82631.1 BCAS1 gene_id:8537|Hs108|chr20              (506 aa)
 initn: 3313 init1: 2589 opt: 2609  Z-score: 1926.7  bits: 366.2 E(32554): 5.4e-101
Smith-Waterman score: 3161; 86.6% identity (86.6% similar) in 584 aa overlap (1-584:1-506)

               10        20        30        40        50        60
pF1KE5 MGNQMSVPQRVEDQENEPEAETYQDNASALNGVPVVVSTHTVQHLEEVDLGISVKTDNVA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 MGNQMSVPQRVEDQENEPEAETYQDNASALNGVPVVVSTHTVQHLEEVDLGISVKTDNVA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE5 TSSPETTEISAVADANGKNLGKEAKPEAPAAKSRFFLMLSRPVPGRTGDQAADSSLGSVK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 TSSPETTEISAVADANGKNLGKEAKPEAPAAKSRFFLMLSRPVPGRTGDQAADSSLGSVK
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE5 LDVSSNKAPANKDPSESWTLPVAAGPGQDTDKTPGHAPAQDKVLSAARDPTLLPPETGGA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 LDVSSNKAPANKDPSESWTLPVAAGPGQDTDKTPGHAPAQDKVLSAARDPTLLPPETGGA
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE5 GGEAPSKPKDSSFFDKFFKLDKGQEKVPGDSQQEAKRAEHQDKVDEVPGLSGQSDDVPAG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 GGEAPSKPKDSSFFDKFFKLDKGQEKVPGDSQQEAKRAEHQDKVDEVPGLSGQSDDVPAG
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE5 KDIVDGKEKEGQELGTADCSVPGDPEGLETAKDDSQAAAIAENNNSIMSFFKTLVSPNKA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 KDIVDGKEKEGQELGTADCSVPGDPEGLETAKDDSQAAAIAENNNSIMSFFKTLVSPNKA
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE5 ETKKDPEDTGAEKSPTTSADLKSDKANFTSQETQGAGKNSKGCNPSGHTQSVTTPEPAKE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 ETKKDPEDTGAEKSPTTSADLKSDKANFTSQETQGAGKNSKGCNPSGHTQSVTTPEPAKE
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KE5 GTKEKSGPTSLPLGKLFWKKSVKEDSVPTGAEENVVCESPVEIIKSKEVESALQTVDLNE
       ::::::::::::::::::::::::::::::::::                          
CCDS82 GTKEKSGPTSLPLGKLFWKKSVKEDSVPTGAEEN--------------------------
              370       380       390                              

              430       440       450       460       470       480
pF1KE5 GDAAPEPTEAKLKREESKPRTSLMAFLRQMSVKGDGGITHSEEINGKDSSCQTSDSTEKT
                                                           ::::::::
CCDS82 ----------------------------------------------------TSDSTEKT
                                                              400  

              490       500       510       520       530       540
pF1KE5 ITPPEPEPTGAPQKGKEGSSKDKKSAAEMNKQKSNKQEAKEPAQCTEQATVDTNSLQNGD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 ITPPEPEPTGAPQKGKEGSSKDKKSAAEMNKQKSNKQEAKEPAQCTEQATVDTNSLQNGD
            410       420       430       440       450       460  

              550       560       570       580    
pF1KE5 KLQKRPEKRQQSLGGFFKGLGPKRMLDAQVQTDPVSIGPVGKSK
       ::::::::::::::::::::::::::::::::::::::::::::
CCDS82 KLQKRPEKRQQSLGGFFKGLGPKRMLDAQVQTDPVSIGPVGKSK
            470       480       490       500      




584 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Tue Nov  8 05:23:21 2016 done: Tue Nov  8 05:23:21 2016
 Total Scan time:  2.610 Total Display time:  0.000

Function used was FASTA [36.3.4 Apr, 2011]