Result of FASTA (omim) for
pFN21AE5630
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE5630, 514 aa
1>>>pF1KE5630 514 - 514 aa - 514 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.8455+/-0.00035; mu= 15.8071+/- 0.022
mean_var=83.8979+/-16.978, 0's: 0 Z-trim(115.9): 45 B-trim: 763 in 1/54
Lambda= 0.140023
statistics sampled from 26697 (26742) to 26697 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.687), E-opt: 0.2 (0.314), width: 16
Scan time: 8.270
The best scores are: opt bits E(85289)
NP_003724 (OMIM: 603281) 2'-5'-oligoadenylate synt ( 514) 3472 711.3 1.7e-204
XP_016875629 (OMIM: 603281) PREDICTED: 2'-5'-oligo ( 366) 2380 490.6 3.2e-138
NP_937856 (OMIM: 603281) 2'-5'-oligoadenylate synt ( 255) 1482 309.1 9.7e-84
XP_016875630 (OMIM: 603281) PREDICTED: 2'-5'-oligo ( 255) 1482 309.1 9.7e-84
NP_001248754 (OMIM: 603281) 2'-5'-oligoadenylate s ( 384) 1481 309.1 1.6e-83
XP_006719497 (OMIM: 164350,222100) PREDICTED: 2'-5 ( 384) 835 178.6 3e-44
NP_001307080 (OMIM: 164350,222100) 2'-5'-oligoaden ( 360) 833 178.1 3.8e-44
NP_002525 (OMIM: 164350,222100) 2'-5'-oligoadenyla ( 364) 833 178.1 3.8e-44
NP_058132 (OMIM: 164350,222100) 2'-5'-oligoadenyla ( 400) 833 178.2 4.1e-44
NP_001027581 (OMIM: 164350,222100) 2'-5'-oligoaden ( 414) 833 178.2 4.2e-44
XP_016874852 (OMIM: 603351) PREDICTED: 2'-5'-oligo (1038) 831 178.0 1.2e-43
NP_006178 (OMIM: 603351) 2'-5'-oligoadenylate synt (1087) 831 178.0 1.2e-43
XP_005253946 (OMIM: 603351) PREDICTED: 2'-5'-oligo (1089) 831 178.0 1.2e-43
NP_002526 (OMIM: 603350) 2'-5'-oligoadenylate synt ( 687) 796 170.8 1.1e-41
NP_058197 (OMIM: 603350) 2'-5'-oligoadenylate synt ( 719) 796 170.8 1.2e-41
XP_016874851 (OMIM: 164350,222100) PREDICTED: 2'-5 ( 237) 558 122.5 1.4e-27
XP_016874850 (OMIM: 164350,222100) PREDICTED: 2'-5 ( 392) 436 98.0 5.6e-20
XP_011536715 (OMIM: 164350,222100) PREDICTED: 2'-5 ( 406) 436 98.0 5.7e-20
NP_001268648 (OMIM: 119540,191339) polyubiquitin-B ( 229) 224 55.0 2.8e-07
NP_001268649 (OMIM: 119540,191339) polyubiquitin-B ( 229) 224 55.0 2.8e-07
NP_001268647 (OMIM: 119540,191339) polyubiquitin-B ( 229) 224 55.0 2.8e-07
NP_061828 (OMIM: 119540,191339) polyubiquitin-B pr ( 229) 224 55.0 2.8e-07
NP_001268645 (OMIM: 119540,191339) polyubiquitin-B ( 229) 224 55.0 2.8e-07
NP_001268646 (OMIM: 119540,191339) polyubiquitin-B ( 229) 224 55.0 2.8e-07
NP_005092 (OMIM: 147571,616126) ubiquitin-like pro ( 165) 171 44.2 0.00036
NP_001307950 (OMIM: 191321) ubiquitin-60S ribosoma ( 135) 164 42.7 0.00081
NP_001307948 (OMIM: 191321) ubiquitin-60S ribosoma ( 128) 163 42.5 0.00089
NP_003324 (OMIM: 191321) ubiquitin-60S ribosomal p ( 128) 163 42.5 0.00089
NP_001307947 (OMIM: 191321) ubiquitin-60S ribosoma ( 128) 163 42.5 0.00089
NP_001307949 (OMIM: 191321) ubiquitin-60S ribosoma ( 128) 163 42.5 0.00089
NP_001029102 (OMIM: 191321) ubiquitin-60S ribosoma ( 128) 163 42.5 0.00089
NP_001307946 (OMIM: 191321) ubiquitin-60S ribosoma ( 128) 163 42.5 0.00089
XP_006722934 (OMIM: 191321) PREDICTED: ubiquitin-6 ( 156) 163 42.6 0.001
XP_005260110 (OMIM: 191321) PREDICTED: ubiquitin-6 ( 156) 163 42.6 0.001
XP_005260109 (OMIM: 191321) PREDICTED: ubiquitin-6 ( 156) 163 42.6 0.001
XP_005260111 (OMIM: 191321) PREDICTED: ubiquitin-6 ( 156) 163 42.6 0.001
XP_016882687 (OMIM: 191321) PREDICTED: ubiquitin-6 ( 203) 164 42.8 0.0011
NP_001170884 (OMIM: 191343) ubiquitin-40S ribosoma ( 156) 159 41.8 0.0018
NP_002945 (OMIM: 191343) ubiquitin-40S ribosomal p ( 156) 159 41.8 0.0018
NP_001129064 (OMIM: 191343) ubiquitin-40S ribosoma ( 156) 159 41.8 0.0018
NP_001027903 (OMIM: 603350) 2'-5'-oligoadenylate s ( 172) 157 41.4 0.0026
NP_006389 (OMIM: 606050) ubiquitin D [Homo sapiens ( 165) 154 40.8 0.0039
>>NP_003724 (OMIM: 603281) 2'-5'-oligoadenylate synthase (514 aa)
initn: 3472 init1: 3472 opt: 3472 Z-score: 3792.5 bits: 711.3 E(85289): 1.7e-204
Smith-Waterman score: 3472; 100.0% identity (100.0% similar) in 514 aa overlap (1-514:1-514)
10 20 30 40 50 60
pF1KE5 MALMQELYSTPASRLDSFVAQWLQPHREWKEEVLDAVRTVEEFLRQEHFQGKRGLDQDVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 MALMQELYSTPASRLDSFVAQWLQPHREWKEEVLDAVRTVEEFLRQEHFQGKRGLDQDVR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 VLKVVKVGSFGNGTVLRSTREVELVAFLSCFHSFQEAAKHHKDVLRLIWKTMWQSQDLLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 VLKVVKVGSFGNGTVLRSTREVELVAFLSCFHSFQEAAKHHKDVLRLIWKTMWQSQDLLD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 LGLEDLRMEQRVPDALVFTIQTRGTAEPITVTIVPAYRALGPSLPNSQPPPEVYVSLIKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 LGLEDLRMEQRVPDALVFTIQTRGTAEPITVTIVPAYRALGPSLPNSQPPPEVYVSLIKA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 CGGPGNFCPSFSELQRNFVKHRPTKLKSLLRLVKHWYQQYVKARSPRANLPPLYALELLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 CGGPGNFCPSFSELQRNFVKHRPTKLKSLLRLVKHWYQQYVKARSPRANLPPLYALELLT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 IYAWEMGTEEDENFMLDEGFTTVMDLLLEYEVICIYWTKYYTLHNAIIEDCVRKQLKKER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 IYAWEMGTEEDENFMLDEGFTTVMDLLLEYEVICIYWTKYYTLHNAIIEDCVRKQLKKER
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE5 PIILDPADPTLNVAEGYRWDIVAQRASQCLKQDCCYDNRENPISSWNVKRARDIHLTVEQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 PIILDPADPTLNVAEGYRWDIVAQRASQCLKQDCCYDNRENPISSWNVKRARDIHLTVEQ
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE5 RGYPDFNLIVNPYEPIRKVKEKIRRTRGYSGLQRLSFQVPGSERQLLSSRCSLAKYGIFS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 RGYPDFNLIVNPYEPIRKVKEKIRRTRGYSGLQRLSFQVPGSERQLLSSRCSLAKYGIFS
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE5 HTHIYLLETIPSEIQVFVKNPDGGSYAYAINPNSFILGLKQQIEDQQGLPKKQQQLEFQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 HTHIYLLETIPSEIQVFVKNPDGGSYAYAINPNSFILGLKQQIEDQQGLPKKQQQLEFQG
430 440 450 460 470 480
490 500 510
pF1KE5 QVLQDWLGLGIYGIQDSDTLILSKKKGEALFPAS
::::::::::::::::::::::::::::::::::
NP_003 QVLQDWLGLGIYGIQDSDTLILSKKKGEALFPAS
490 500 510
>>XP_016875629 (OMIM: 603281) PREDICTED: 2'-5'-oligoaden (366 aa)
initn: 2379 init1: 2379 opt: 2380 Z-score: 2602.5 bits: 490.6 E(85289): 3.2e-138
Smith-Waterman score: 2380; 99.4% identity (99.4% similar) in 352 aa overlap (1-352:1-352)
10 20 30 40 50 60
pF1KE5 MALMQELYSTPASRLDSFVAQWLQPHREWKEEVLDAVRTVEEFLRQEHFQGKRGLDQDVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MALMQELYSTPASRLDSFVAQWLQPHREWKEEVLDAVRTVEEFLRQEHFQGKRGLDQDVR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 VLKVVKVGSFGNGTVLRSTREVELVAFLSCFHSFQEAAKHHKDVLRLIWKTMWQSQDLLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VLKVVKVGSFGNGTVLRSTREVELVAFLSCFHSFQEAAKHHKDVLRLIWKTMWQSQDLLD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 LGLEDLRMEQRVPDALVFTIQTRGTAEPITVTIVPAYRALGPSLPNSQPPPEVYVSLIKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LGLEDLRMEQRVPDALVFTIQTRGTAEPITVTIVPAYRALGPSLPNSQPPPEVYVSLIKA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 CGGPGNFCPSFSELQRNFVKHRPTKLKSLLRLVKHWYQQYVKARSPRANLPPLYALELLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CGGPGNFCPSFSELQRNFVKHRPTKLKSLLRLVKHWYQQYVKARSPRANLPPLYALELLT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 IYAWEMGTEEDENFMLDEGFTTVMDLLLEYEVICIYWTKYYTLHNAIIEDCVRKQLKKER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IYAWEMGTEEDENFMLDEGFTTVMDLLLEYEVICIYWTKYYTLHNAIIEDCVRKQLKKER
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE5 PIILDPADPTLNVAEGYRWDIVAQRASQCLKQDCCYDNRENPISSWNVKRARDIHLTVEQ
::::::::::::::::::::::::::::::::::::::::::::::::: :
XP_016 PIILDPADPTLNVAEGYRWDIVAQRASQCLKQDCCYDNRENPISSWNVKLWRLGSPSQDT
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE5 RGYPDFNLIVNPYEPIRKVKEKIRRTRGYSGLQRLSFQVPGSERQLLSSRCSLAKYGIFS
XP_016 GRFGVW
>>NP_937856 (OMIM: 603281) 2'-5'-oligoadenylate synthase (255 aa)
initn: 1479 init1: 1479 opt: 1482 Z-score: 1624.4 bits: 309.1 E(85289): 9.7e-84
Smith-Waterman score: 1482; 96.1% identity (97.4% similar) in 231 aa overlap (1-231:1-228)
10 20 30 40 50 60
pF1KE5 MALMQELYSTPASRLDSFVAQWLQPHREWKEEVLDAVRTVEEFLRQEHFQGKRGLDQDVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_937 MALMQELYSTPASRLDSFVAQWLQPHREWKEEVLDAVRTVEEFLRQEHFQGKRGLDQDVR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 VLKVVKVGSFGNGTVLRSTREVELVAFLSCFHSFQEAAKHHKDVLRLIWKTMWQSQDLLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_937 VLKVVKVGSFGNGTVLRSTREVELVAFLSCFHSFQEAAKHHKDVLRLIWKTMWQSQDLLD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 LGLEDLRMEQRVPDALVFTIQTRGTAEPITVTIVPAYRALGPSLPNSQPPPEVYVSLIKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_937 LGLEDLRMEQRVPDALVFTIQTRGTAEPITVTIVPAYRALGPSLPNSQPPPEVYVSLIKA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 CGGPGNFCPSFSELQRNFVKHRPTKLKSLLRLVKHWYQQYVKARSPRANLPPLYALELLT
::::::::::::::::::::::::::::::::::::::: :. : .. :
NP_937 CGGPGNFCPSFSELQRNFVKHRPTKLKSLLRLVKHWYQQ---AHHPGSGRPHPQRGRRVQ
190 200 210 220 230
250 260 270 280 290 300
pF1KE5 IYAWEMGTEEDENFMLDEGFTTVMDLLLEYEVICIYWTKYYTLHNAIIEDCVRKQLKKER
NP_937 MGHRCSEGLPVPETGLLL
240 250
>>XP_016875630 (OMIM: 603281) PREDICTED: 2'-5'-oligoaden (255 aa)
initn: 1479 init1: 1479 opt: 1482 Z-score: 1624.4 bits: 309.1 E(85289): 9.7e-84
Smith-Waterman score: 1482; 96.1% identity (97.4% similar) in 231 aa overlap (1-231:1-228)
10 20 30 40 50 60
pF1KE5 MALMQELYSTPASRLDSFVAQWLQPHREWKEEVLDAVRTVEEFLRQEHFQGKRGLDQDVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MALMQELYSTPASRLDSFVAQWLQPHREWKEEVLDAVRTVEEFLRQEHFQGKRGLDQDVR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 VLKVVKVGSFGNGTVLRSTREVELVAFLSCFHSFQEAAKHHKDVLRLIWKTMWQSQDLLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VLKVVKVGSFGNGTVLRSTREVELVAFLSCFHSFQEAAKHHKDVLRLIWKTMWQSQDLLD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 LGLEDLRMEQRVPDALVFTIQTRGTAEPITVTIVPAYRALGPSLPNSQPPPEVYVSLIKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LGLEDLRMEQRVPDALVFTIQTRGTAEPITVTIVPAYRALGPSLPNSQPPPEVYVSLIKA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 CGGPGNFCPSFSELQRNFVKHRPTKLKSLLRLVKHWYQQYVKARSPRANLPPLYALELLT
::::::::::::::::::::::::::::::::::::::: :. : .. :
XP_016 CGGPGNFCPSFSELQRNFVKHRPTKLKSLLRLVKHWYQQ---AHHPGSGRPHPQRGRRVQ
190 200 210 220 230
250 260 270 280 290 300
pF1KE5 IYAWEMGTEEDENFMLDEGFTTVMDLLLEYEVICIYWTKYYTLHNAIIEDCVRKQLKKER
XP_016 MGHRCSEGLPVPETGLLL
240 250
>>NP_001248754 (OMIM: 603281) 2'-5'-oligoadenylate synth (384 aa)
initn: 1481 init1: 1481 opt: 1481 Z-score: 1620.7 bits: 309.1 E(85289): 1.6e-83
Smith-Waterman score: 2302; 74.7% identity (74.7% similar) in 514 aa overlap (1-514:1-384)
10 20 30 40 50 60
pF1KE5 MALMQELYSTPASRLDSFVAQWLQPHREWKEEVLDAVRTVEEFLRQEHFQGKRGLDQDVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MALMQELYSTPASRLDSFVAQWLQPHREWKEEVLDAVRTVEEFLRQEHFQGKRGLDQDVR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 VLKVVKVGSFGNGTVLRSTREVELVAFLSCFHSFQEAAKHHKDVLRLIWKTMWQSQDLLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VLKVVKVGSFGNGTVLRSTREVELVAFLSCFHSFQEAAKHHKDVLRLIWKTMWQSQDLLD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 LGLEDLRMEQRVPDALVFTIQTRGTAEPITVTIVPAYRALGPSLPNSQPPPEVYVSLIKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LGLEDLRMEQRVPDALVFTIQTRGTAEPITVTIVPAYRALGPSLPNSQPPPEVYVSLIKA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 CGGPGNFCPSFSELQRNFVKHRPTKLKSLLRLVKHWYQQYVKARSPRANLPPLYALELLT
:::::::::::::::::::::::::::::::::::::::
NP_001 CGGPGNFCPSFSELQRNFVKHRPTKLKSLLRLVKHWYQQ---------------------
190 200 210
250 260 270 280 290 300
pF1KE5 IYAWEMGTEEDENFMLDEGFTTVMDLLLEYEVICIYWTKYYTLHNAIIEDCVRKQLKKER
NP_001 ------------------------------------------------------------
310 320 330 340 350 360
pF1KE5 PIILDPADPTLNVAEGYRWDIVAQRASQCLKQDCCYDNRENPISSWNVKRARDIHLTVEQ
:::::::::::
NP_001 -------------------------------------------------RARDIHLTVEQ
220 230
370 380 390 400 410 420
pF1KE5 RGYPDFNLIVNPYEPIRKVKEKIRRTRGYSGLQRLSFQVPGSERQLLSSRCSLAKYGIFS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RGYPDFNLIVNPYEPIRKVKEKIRRTRGYSGLQRLSFQVPGSERQLLSSRCSLAKYGIFS
240 250 260 270 280 290
430 440 450 460 470 480
pF1KE5 HTHIYLLETIPSEIQVFVKNPDGGSYAYAINPNSFILGLKQQIEDQQGLPKKQQQLEFQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HTHIYLLETIPSEIQVFVKNPDGGSYAYAINPNSFILGLKQQIEDQQGLPKKQQQLEFQG
300 310 320 330 340 350
490 500 510
pF1KE5 QVLQDWLGLGIYGIQDSDTLILSKKKGEALFPAS
::::::::::::::::::::::::::::::::::
NP_001 QVLQDWLGLGIYGIQDSDTLILSKKKGEALFPAS
360 370 380
>>XP_006719497 (OMIM: 164350,222100) PREDICTED: 2'-5'-ol (384 aa)
initn: 765 init1: 246 opt: 835 Z-score: 915.4 bits: 178.6 E(85289): 3e-44
Smith-Waterman score: 835; 39.6% identity (66.5% similar) in 361 aa overlap (4-354:1-354)
10 20 30 40 50 60
pF1KE5 MALMQELYSTPASRLDSFVAQWLQPHREWKEEVLDAVRTVEEFLRQEHFQGKRGLDQDVR
:..: .:::. ::.:. ..: : .. .. :. . ::... : :: . :
XP_006 MMDLRNTPAKSLDKFIEDYLLPDTCFRMQINHAIDIICGFLKERCF---RGSSYPVC
10 20 30 40 50
70 80 90 100 110
pF1KE5 VLKVVKVGSFGNGTVLRSTREVELVAFLSCFHSFQEAAKHHKDVLRLIWKTMW--QSQDL
: :::: :: :.::.::. ...::.::: . .::. ... . .. : . . : .
XP_006 VSKVVKGGSSGKGTTLRGRSDADLVVFLSPLTTFQDQLNRRGEFIQEIRRQLEACQRERA
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE5 LDLGLEDLRMEQRVPDALVFTIQTRGTAEPITVTIVPAYRALGPSLPNSQPPPEVYVSLI
... .: . : :: :.... .: . ..::. ::: . .: :..::.::
XP_006 FSVKFEVQAPRWGNPRALSFVLSSLQLGEGVEFDVLPAFDALGQLTGGYKPNPQIYVKLI
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE5 KACGG---PGNFCPSFSELQRNFVKHRPTKLKSLLRLVKHWYQQYVKARSPRANLPPLYA
. : :.: :.::::.:.:.::::::::.::::::::. .. ..::: ::
XP_006 EECTDLQKEGEFSTCFTELQRDFLKQRPTKLKSLIRLVKHWYQN---CKKKLGKLPPQYA
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE5 LELLTIYAWEMGTEEDENFMLDEGFTTVMDLLLEYEVICIYWTKYYTLHNAIIEDCVRKQ
:::::.:::: :. . .: .:: ::..:...:. .:::::::: ..: ::: .:.:
XP_006 LELLTVYAWERGSMKT-HFNTAQGFRTVLELVINYQQLCIYWTKYYDFKNPIIEKYLRRQ
240 250 260 270 280 290
300 310 320 330 340 350
pF1KE5 LKKERPIILDPADPTLNVAEG--YRWDIVAQRASQCLKQDCCYDNRENPISSWNV---KR
: : ::.:::::::: :.. : : .::.: :. : . .:.::: . .:
XP_006 LTKPRPVILDPADPTGNLGGGDPKGWRQLAQEAEAWLNYPCFKNWDGSPVSSWILLMRQR
300 310 320 330 340 350
360 370 380 390 400 410
pF1KE5 ARDIHLTVEQRGYPDFNLIVNPYEPIRKVKEKIRRTRGYSGLQRLSFQVPGSERQLLSSR
:..
XP_006 LREVRSLAQGHQLTSGGNGIQAQWTLKPVLMSLC
360 370 380
>>NP_001307080 (OMIM: 164350,222100) 2'-5'-oligoadenylat (360 aa)
initn: 765 init1: 246 opt: 833 Z-score: 913.7 bits: 178.1 E(85289): 3.8e-44
Smith-Waterman score: 833; 40.3% identity (66.9% similar) in 350 aa overlap (4-346:1-343)
10 20 30 40 50 60
pF1KE5 MALMQELYSTPASRLDSFVAQWLQPHREWKEEVLDAVRTVEEFLRQEHFQGKRGLDQDVR
:..: .:::. ::.:. ..: : .. .. :. . ::... : :: . :
NP_001 MMDLRNTPAKSLDKFIEDYLLPDTCFRMQINHAIDIICGFLKERCF---RGSSYPVC
10 20 30 40 50
70 80 90 100 110
pF1KE5 VLKVVKVGSFGNGTVLRSTREVELVAFLSCFHSFQEAAKHHKDVLRLIWKTMW--QSQDL
: :::: :: :.::.::. ...::.::: . .::. ... . .. : . . : .
NP_001 VSKVVKGGSSGKGTTLRGRSDADLVVFLSPLTTFQDQLNRRGEFIQEIRRQLEACQRERA
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE5 LDLGLEDLRMEQRVPDALVFTIQTRGTAEPITVTIVPAYRALGPSLPNSQPPPEVYVSLI
... .: . : :: :.... .: . ..::. ::: . .: :..::.::
NP_001 FSVKFEVQAPRWGNPRALSFVLSSLQLGEGVEFDVLPAFDALGQLTGGYKPNPQIYVKLI
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE5 KACGG---PGNFCPSFSELQRNFVKHRPTKLKSLLRLVKHWYQQYVKARSPRANLPPLYA
. : :.: :.::::.:.:.::::::::.::::::::. .. ..::: ::
NP_001 EECTDLQKEGEFSTCFTELQRDFLKQRPTKLKSLIRLVKHWYQN---CKKKLGKLPPQYA
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE5 LELLTIYAWEMGTEEDENFMLDEGFTTVMDLLLEYEVICIYWTKYYTLHNAIIEDCVRKQ
:::::.:::: :. . .: .:: ::..:...:. .:::::::: ..: ::: .:.:
NP_001 LELLTVYAWERGSMKT-HFNTAQGFRTVLELVINYQQLCIYWTKYYDFKNPIIEKYLRRQ
240 250 260 270 280 290
300 310 320 330 340 350
pF1KE5 LKKERPIILDPADPTLNVAEG--YRWDIVAQRASQCLKQDCCYDNRENPISSWNVKRARD
: : ::.:::::::: :.. : : .::.: :. : . .:.:::
NP_001 LTKPRPVILDPADPTGNLGGGDPKGWRQLAQEAEAWLNYPCFKNWDGSPVSSWILLVNLT
300 310 320 330 340 350
360 370 380 390 400 410
pF1KE5 IHLTVEQRGYPDFNLIVNPYEPIRKVKEKIRRTRGYSGLQRLSFQVPGSERQLLSSRCSL
NP_001 LVGRRNYTNN
360
>>NP_002525 (OMIM: 164350,222100) 2'-5'-oligoadenylate s (364 aa)
initn: 765 init1: 246 opt: 833 Z-score: 913.6 bits: 178.1 E(85289): 3.8e-44
Smith-Waterman score: 833; 40.3% identity (66.9% similar) in 350 aa overlap (4-346:1-343)
10 20 30 40 50 60
pF1KE5 MALMQELYSTPASRLDSFVAQWLQPHREWKEEVLDAVRTVEEFLRQEHFQGKRGLDQDVR
:..: .:::. ::.:. ..: : .. .. :. . ::... : :: . :
NP_002 MMDLRNTPAKSLDKFIEDYLLPDTCFRMQINHAIDIICGFLKERCF---RGSSYPVC
10 20 30 40 50
70 80 90 100 110
pF1KE5 VLKVVKVGSFGNGTVLRSTREVELVAFLSCFHSFQEAAKHHKDVLRLIWKTMW--QSQDL
: :::: :: :.::.::. ...::.::: . .::. ... . .. : . . : .
NP_002 VSKVVKGGSSGKGTTLRGRSDADLVVFLSPLTTFQDQLNRRGEFIQEIRRQLEACQRERA
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE5 LDLGLEDLRMEQRVPDALVFTIQTRGTAEPITVTIVPAYRALGPSLPNSQPPPEVYVSLI
... .: . : :: :.... .: . ..::. ::: . .: :..::.::
NP_002 FSVKFEVQAPRWGNPRALSFVLSSLQLGEGVEFDVLPAFDALGQLTGGYKPNPQIYVKLI
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE5 KACGG---PGNFCPSFSELQRNFVKHRPTKLKSLLRLVKHWYQQYVKARSPRANLPPLYA
. : :.: :.::::.:.:.::::::::.::::::::. .. ..::: ::
NP_002 EECTDLQKEGEFSTCFTELQRDFLKQRPTKLKSLIRLVKHWYQN---CKKKLGKLPPQYA
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE5 LELLTIYAWEMGTEEDENFMLDEGFTTVMDLLLEYEVICIYWTKYYTLHNAIIEDCVRKQ
:::::.:::: :. . .: .:: ::..:...:. .:::::::: ..: ::: .:.:
NP_002 LELLTVYAWERGSMKT-HFNTAQGFRTVLELVINYQQLCIYWTKYYDFKNPIIEKYLRRQ
240 250 260 270 280 290
300 310 320 330 340 350
pF1KE5 LKKERPIILDPADPTLNVAEG--YRWDIVAQRASQCLKQDCCYDNRENPISSWNVKRARD
: : ::.:::::::: :.. : : .::.: :. : . .:.:::
NP_002 LTKPRPVILDPADPTGNLGGGDPKGWRQLAQEAEAWLNYPCFKNWDGSPVSSWILLVRPP
300 310 320 330 340 350
360 370 380 390 400 410
pF1KE5 IHLTVEQRGYPDFNLIVNPYEPIRKVKEKIRRTRGYSGLQRLSFQVPGSERQLLSSRCSL
NP_002 ASSLPFIPAPLHEA
360
>>NP_058132 (OMIM: 164350,222100) 2'-5'-oligoadenylate s (400 aa)
initn: 765 init1: 246 opt: 833 Z-score: 913.0 bits: 178.2 E(85289): 4.1e-44
Smith-Waterman score: 833; 40.3% identity (66.9% similar) in 350 aa overlap (4-346:1-343)
10 20 30 40 50 60
pF1KE5 MALMQELYSTPASRLDSFVAQWLQPHREWKEEVLDAVRTVEEFLRQEHFQGKRGLDQDVR
:..: .:::. ::.:. ..: : .. .. :. . ::... : :: . :
NP_058 MMDLRNTPAKSLDKFIEDYLLPDTCFRMQINHAIDIICGFLKERCF---RGSSYPVC
10 20 30 40 50
70 80 90 100 110
pF1KE5 VLKVVKVGSFGNGTVLRSTREVELVAFLSCFHSFQEAAKHHKDVLRLIWKTMW--QSQDL
: :::: :: :.::.::. ...::.::: . .::. ... . .. : . . : .
NP_058 VSKVVKGGSSGKGTTLRGRSDADLVVFLSPLTTFQDQLNRRGEFIQEIRRQLEACQRERA
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE5 LDLGLEDLRMEQRVPDALVFTIQTRGTAEPITVTIVPAYRALGPSLPNSQPPPEVYVSLI
... .: . : :: :.... .: . ..::. ::: . .: :..::.::
NP_058 FSVKFEVQAPRWGNPRALSFVLSSLQLGEGVEFDVLPAFDALGQLTGGYKPNPQIYVKLI
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE5 KACGG---PGNFCPSFSELQRNFVKHRPTKLKSLLRLVKHWYQQYVKARSPRANLPPLYA
. : :.: :.::::.:.:.::::::::.::::::::. .. ..::: ::
NP_058 EECTDLQKEGEFSTCFTELQRDFLKQRPTKLKSLIRLVKHWYQN---CKKKLGKLPPQYA
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE5 LELLTIYAWEMGTEEDENFMLDEGFTTVMDLLLEYEVICIYWTKYYTLHNAIIEDCVRKQ
:::::.:::: :. . .: .:: ::..:...:. .:::::::: ..: ::: .:.:
NP_058 LELLTVYAWERGSMKT-HFNTAQGFRTVLELVINYQQLCIYWTKYYDFKNPIIEKYLRRQ
240 250 260 270 280 290
300 310 320 330 340 350
pF1KE5 LKKERPIILDPADPTLNVAEG--YRWDIVAQRASQCLKQDCCYDNRENPISSWNVKRARD
: : ::.:::::::: :.. : : .::.: :. : . .:.:::
NP_058 LTKPRPVILDPADPTGNLGGGDPKGWRQLAQEAEAWLNYPCFKNWDGSPVSSWILLAESN
300 310 320 330 340 350
360 370 380 390 400 410
pF1KE5 IHLTVEQRGYPDFNLIVNPYEPIRKVKEKIRRTRGYSGLQRLSFQVPGSERQLLSSRCSL
NP_058 SADDETDDPRRYQKYGYIGTHEYPHFSHRPSTLQAASTPQAEEDWTCTIL
360 370 380 390 400
>>NP_001027581 (OMIM: 164350,222100) 2'-5'-oligoadenylat (414 aa)
initn: 765 init1: 246 opt: 833 Z-score: 912.8 bits: 178.2 E(85289): 4.2e-44
Smith-Waterman score: 833; 40.3% identity (66.9% similar) in 350 aa overlap (4-346:1-343)
10 20 30 40 50 60
pF1KE5 MALMQELYSTPASRLDSFVAQWLQPHREWKEEVLDAVRTVEEFLRQEHFQGKRGLDQDVR
:..: .:::. ::.:. ..: : .. .. :. . ::... : :: . :
NP_001 MMDLRNTPAKSLDKFIEDYLLPDTCFRMQINHAIDIICGFLKERCF---RGSSYPVC
10 20 30 40 50
70 80 90 100 110
pF1KE5 VLKVVKVGSFGNGTVLRSTREVELVAFLSCFHSFQEAAKHHKDVLRLIWKTMW--QSQDL
: :::: :: :.::.::. ...::.::: . .::. ... . .. : . . : .
NP_001 VSKVVKGGSSGKGTTLRGRSDADLVVFLSPLTTFQDQLNRRGEFIQEIRRQLEACQRERA
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE5 LDLGLEDLRMEQRVPDALVFTIQTRGTAEPITVTIVPAYRALGPSLPNSQPPPEVYVSLI
... .: . : :: :.... .: . ..::. ::: . .: :..::.::
NP_001 FSVKFEVQAPRWGNPRALSFVLSSLQLGEGVEFDVLPAFDALGQLTGGYKPNPQIYVKLI
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE5 KACGG---PGNFCPSFSELQRNFVKHRPTKLKSLLRLVKHWYQQYVKARSPRANLPPLYA
. : :.: :.::::.:.:.::::::::.::::::::. .. ..::: ::
NP_001 EECTDLQKEGEFSTCFTELQRDFLKQRPTKLKSLIRLVKHWYQN---CKKKLGKLPPQYA
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE5 LELLTIYAWEMGTEEDENFMLDEGFTTVMDLLLEYEVICIYWTKYYTLHNAIIEDCVRKQ
:::::.:::: :. . .: .:: ::..:...:. .:::::::: ..: ::: .:.:
NP_001 LELLTVYAWERGSMKT-HFNTAQGFRTVLELVINYQQLCIYWTKYYDFKNPIIEKYLRRQ
240 250 260 270 280 290
300 310 320 330 340 350
pF1KE5 LKKERPIILDPADPTLNVAEG--YRWDIVAQRASQCLKQDCCYDNRENPISSWNVKRARD
: : ::.:::::::: :.. : : .::.: :. : . .:.:::
NP_001 LTKPRPVILDPADPTGNLGGGDPKGWRQLAQEAEAWLNYPCFKNWDGSPVSSWILLTQHT
300 310 320 330 340 350
360 370 380 390 400 410
pF1KE5 IHLTVEQRGYPDFNLIVNPYEPIRKVKEKIRRTRGYSGLQRLSFQVPGSERQLLSSRCSL
NP_001 PGSIHPTGRRGLDLHHPLNASASWGKGLQCYLDQFLHFQVGLLIQRGQSSSVSWCIIQDR
360 370 380 390 400 410
514 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 05:20:43 2016 done: Tue Nov 8 05:20:44 2016
Total Scan time: 8.270 Total Display time: 0.050
Function used was FASTA [36.3.4 Apr, 2011]