FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5603, 472 aa 1>>>pF1KE5603 472 - 472 aa - 472 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.7123+/-0.000805; mu= 11.2088+/- 0.049 mean_var=97.6340+/-19.084, 0's: 0 Z-trim(109.7): 22 B-trim: 0 in 0/53 Lambda= 0.129800 statistics sampled from 11031 (11046) to 11031 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.708), E-opt: 0.2 (0.339), width: 16 Scan time: 3.130 The best scores are: opt bits E(32554) CCDS65535.1 SPATA6 gene_id:54558|Hs108|chr1 ( 472) 3261 621.0 8.5e-178 CCDS551.1 SPATA6 gene_id:54558|Hs108|chr1 ( 488) 2653 507.1 1.6e-143 CCDS72787.1 SPATA6 gene_id:54558|Hs108|chr1 ( 474) 2046 393.5 2.6e-109 >>CCDS65535.1 SPATA6 gene_id:54558|Hs108|chr1 (472 aa) initn: 3261 init1: 3261 opt: 3261 Z-score: 3305.5 bits: 621.0 E(32554): 8.5e-178 Smith-Waterman score: 3261; 99.6% identity (99.6% similar) in 472 aa overlap (1-472:1-472) 10 20 30 40 50 60 pF1KE5 MPKVKALQCALALEISSVTCPGVVPKDIEDIYLSICVFGQYKKTQCVPATFPLVFNARMV :::::::::::::::::::::::: :: :::::::::::::::::::::::::::::::: CCDS65 MPKVKALQCALALEISSVTCPGVVLKDKEDIYLSICVFGQYKKTQCVPATFPLVFNARMV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 FEKVFPDAVDPGDVVTQLEYDTAVFELIQLVPPVGETLSTYDENTRDFMFPGPNQMSGHH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS65 FEKVFPDAVDPGDVVTQLEYDTAVFELIQLVPPVGETLSTYDENTRDFMFPGPNQMSGHH 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 DSNRQVTMRRISGLRGNAPRLEFSTTSVITECLISSRKCHTQDKFIYHLAPVEKSHGRLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS65 DSNRQVTMRRISGLRGNAPRLEFSTTSVITECLISSRKCHTQDKFIYHLAPVEKSHGRLQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 NRTSRSQKKKSKSPERSKYCINAKNYEQPTISSKSHSPSPYTKRRMCELSEDTRRRLAHL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS65 NRTSRSQKKKSKSPERSKYCINAKNYEQPTISSKSHSPSPYTKRRMCELSEDTRRRLAHL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 NLGPYEFKKETDKPPFVIRHVDPPSPRADTLLGSSGRDCERDGWSRVHNDHSHLGCCRPK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS65 NLGPYEFKKETDKPPFVIRHVDPPSPRADTLLGSSGRDCERDGWSRVHNDHSHLGCCRPK 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE5 DYKVIRTPHGRDFDDSLEKCEEYLSPRSCSKPRHSARTLLVHSAPSTMPKHSPSPVLNRA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS65 DYKVIRTPHGRDFDDSLEKCEEYLSPRSCSKPRHSARTLLVHSAPSTMPKHSPSPVLNRA 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE5 SLRERFHSDWCSPSNCDEIHDRDERDLEKDDELELKRSLLCRDSAYDSDPEYSSCQQPRG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS65 SLRERFHSDWCSPSNCDEIHDRDERDLEKDDELELKRSLLCRDSAYDSDPEYSSCQQPRG 370 380 390 400 410 420 430 440 450 460 470 pF1KE5 TFHLDDGEYWSNRAASYKGKSHRPIFENSMDKMYRNLYKKACSSASHTQESF :::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS65 TFHLDDGEYWSNRAASYKGKSHRPIFENSMDKMYRNLYKKACSSASHTQESF 430 440 450 460 470 >>CCDS551.1 SPATA6 gene_id:54558|Hs108|chr1 (488 aa) initn: 2636 init1: 2636 opt: 2653 Z-score: 2690.0 bits: 507.1 E(32554): 1.6e-143 Smith-Waterman score: 3219; 96.3% identity (96.3% similar) in 488 aa overlap (1-472:1-488) 10 20 30 40 50 60 pF1KE5 MPKVKALQCALALEISSVTCPGVVPKDIEDIYLSICVFGQYKKTQCVPATFPLVFNARMV :::::::::::::::::::::::: :: :::::::::::::::::::::::::::::::: CCDS55 MPKVKALQCALALEISSVTCPGVVLKDKEDIYLSICVFGQYKKTQCVPATFPLVFNARMV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 FEKVFPDAVDPGDVVTQLEYDTAVFELIQLVPPVGETLSTYDENTRDFMFPGPNQMSGHH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 FEKVFPDAVDPGDVVTQLEYDTAVFELIQLVPPVGETLSTYDENTRDFMFPGPNQMSGHH 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 DSNRQVTMRRISGLRGNAPRLEFSTTSVITECLISSRKCHTQDKFIYHLAPVEKSHGRLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 DSNRQVTMRRISGLRGNAPRLEFSTTSVITECLISSRKCHTQDKFIYHLAPVEKSHGRLQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 NRTSRSQKKKSKSPERSKYCINAKNYEQPTISSKSHSPSPYTKRRMCELSEDTRRRLAHL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 NRTSRSQKKKSKSPERSKYCINAKNYEQPTISSKSHSPSPYTKRRMCELSEDTRRRLAHL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 NLGPYEFKKETDKPPFVIRHVDPPSPRADTLLGSSGRDCERDGWSRVHNDHSHLGCCRPK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 NLGPYEFKKETDKPPFVIRHVDPPSPRADTLLGSSGRDCERDGWSRVHNDHSHLGCCRPK 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE5 DYKVIRTPHGRDFDDSLEKCEEYLSPRSCSKPRHSARTLLVHSAPSTMPKHSPSPVLNRA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 DYKVIRTPHGRDFDDSLEKCEEYLSPRSCSKPRHSARTLLVHSAPSTMPKHSPSPVLNRA 310 320 330 340 350 360 370 380 390 400 pF1KE5 SLRERFHSDWCSPSNCDEIHDR----------------DERDLEKDDELELKRSLLCRDS :::::::::::::::::::::: :::::::::::::::::::::: CCDS55 SLRERFHSDWCSPSNCDEIHDRVKNVLKSHQAHQRHLYDERDLEKDDELELKRSLLCRDS 370 380 390 400 410 420 410 420 430 440 450 460 pF1KE5 AYDSDPEYSSCQQPRGTFHLDDGEYWSNRAASYKGKSHRPIFENSMDKMYRNLYKKACSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 AYDSDPEYSSCQQPRGTFHLDDGEYWSNRAASYKGKSHRPIFENSMDKMYRNLYKKACSS 430 440 450 460 470 480 470 pF1KE5 ASHTQESF :::::::: CCDS55 ASHTQESF >>CCDS72787.1 SPATA6 gene_id:54558|Hs108|chr1 (474 aa) initn: 2526 init1: 2029 opt: 2046 Z-score: 2075.9 bits: 393.5 E(32554): 2.6e-109 Smith-Waterman score: 3085; 93.2% identity (93.4% similar) in 488 aa overlap (1-472:1-474) 10 20 30 40 50 60 pF1KE5 MPKVKALQCALALEISSVTCPGVVPKDIEDIYLSICVFGQYKKTQCVPATFPLVFNARMV :::::::::::::::::::::::: :: :::::::::::::::::::::::::::::::: CCDS72 MPKVKALQCALALEISSVTCPGVVLKDKEDIYLSICVFGQYKKTQCVPATFPLVFNARMV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 FEKVFPDAVDPGDVVTQLEYDTAVFELIQLVPPVGETLSTYDENTRDFMFPGPNQMSGHH ::::::::::::::::::: .:::::::::::::::::::::::::: CCDS72 FEKVFPDAVDPGDVVTQLE--------------LGETLSTYDENTRDFMFPGPNQMSGHH 70 80 90 100 130 140 150 160 170 180 pF1KE5 DSNRQVTMRRISGLRGNAPRLEFSTTSVITECLISSRKCHTQDKFIYHLAPVEKSHGRLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS72 DSNRQVTMRRISGLRGNAPRLEFSTTSVITECLISSRKCHTQDKFIYHLAPVEKSHGRLQ 110 120 130 140 150 160 190 200 210 220 230 240 pF1KE5 NRTSRSQKKKSKSPERSKYCINAKNYEQPTISSKSHSPSPYTKRRMCELSEDTRRRLAHL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS72 NRTSRSQKKKSKSPERSKYCINAKNYEQPTISSKSHSPSPYTKRRMCELSEDTRRRLAHL 170 180 190 200 210 220 250 260 270 280 290 300 pF1KE5 NLGPYEFKKETDKPPFVIRHVDPPSPRADTLLGSSGRDCERDGWSRVHNDHSHLGCCRPK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS72 NLGPYEFKKETDKPPFVIRHVDPPSPRADTLLGSSGRDCERDGWSRVHNDHSHLGCCRPK 230 240 250 260 270 280 310 320 330 340 350 360 pF1KE5 DYKVIRTPHGRDFDDSLEKCEEYLSPRSCSKPRHSARTLLVHSAPSTMPKHSPSPVLNRA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS72 DYKVIRTPHGRDFDDSLEKCEEYLSPRSCSKPRHSARTLLVHSAPSTMPKHSPSPVLNRA 290 300 310 320 330 340 370 380 390 400 pF1KE5 SLRERFHSDWCSPSNCDEIHDR----------------DERDLEKDDELELKRSLLCRDS :::::::::::::::::::::: :::::::::::::::::::::: CCDS72 SLRERFHSDWCSPSNCDEIHDRVKNVLKSHQAHQRHLYDERDLEKDDELELKRSLLCRDS 350 360 370 380 390 400 410 420 430 440 450 460 pF1KE5 AYDSDPEYSSCQQPRGTFHLDDGEYWSNRAASYKGKSHRPIFENSMDKMYRNLYKKACSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS72 AYDSDPEYSSCQQPRGTFHLDDGEYWSNRAASYKGKSHRPIFENSMDKMYRNLYKKACSS 410 420 430 440 450 460 470 pF1KE5 ASHTQESF :::::::: CCDS72 ASHTQESF 470 472 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 05:03:07 2016 done: Tue Nov 8 05:03:08 2016 Total Scan time: 3.130 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]