FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5402, 313 aa 1>>>pF1KE5402 313 - 313 aa - 313 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.6252+/-0.000893; mu= 14.1505+/- 0.054 mean_var=67.9588+/-13.385, 0's: 0 Z-trim(105.1): 41 B-trim: 0 in 0/51 Lambda= 0.155579 statistics sampled from 8209 (8250) to 8209 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.622), E-opt: 0.2 (0.253), width: 16 Scan time: 2.150 The best scores are: opt bits E(32554) CCDS5580.1 STYXL1 gene_id:51657|Hs108|chr7 ( 313) 2131 487.3 6.6e-138 CCDS83193.1 STYXL1 gene_id:51657|Hs108|chr7 ( 217) 1112 258.5 3.4e-69 >>CCDS5580.1 STYXL1 gene_id:51657|Hs108|chr7 (313 aa) initn: 2131 init1: 2131 opt: 2131 Z-score: 2589.3 bits: 487.3 E(32554): 6.6e-138 Smith-Waterman score: 2131; 100.0% identity (100.0% similar) in 313 aa overlap (1-313:1-313) 10 20 30 40 50 60 pF1KE5 MPGLLLCEPTELYNILNQATKLSRLTDPNYLCLLDVRSKWEYDESHVITALRVKKKNNEY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 MPGLLLCEPTELYNILNQATKLSRLTDPNYLCLLDVRSKWEYDESHVITALRVKKKNNEY 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 LLPESVDLECVKYCVVYDNNSSTLEILLKDDDDDSDSDGDGKDLVPQAAIEYGRILTRLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 LLPESVDLECVKYCVVYDNNSSTLEILLKDDDDDSDSDGDGKDLVPQAAIEYGRILTRLT 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 HHPVYILKGGYERFSGTYHFLRTQKIIWMPQELDAFQPYPIEIVPGKVFVGNFSQACDPK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 HHPVYILKGGYERFSGTYHFLRTQKIIWMPQELDAFQPYPIEIVPGKVFVGNFSQACDPK 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 IQKDLKIKAHVNVSMDTGPFFAGDADKLLHIRIEDSPEAQILPFLRHMCHFIEIHHHLGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 IQKDLKIKAHVNVSMDTGPFFAGDADKLLHIRIEDSPEAQILPFLRHMCHFIEIHHHLGS 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 VILIFSTQGISRSCAAIIAYLMHSNEQTLQRSWAYVKKCKNNMCPNRGLVSQLLEWEKTI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 VILIFSTQGISRSCAAIIAYLMHSNEQTLQRSWAYVKKCKNNMCPNRGLVSQLLEWEKTI 250 260 270 280 290 300 310 pF1KE5 LGDSITNIMDPLY ::::::::::::: CCDS55 LGDSITNIMDPLY 310 >>CCDS83193.1 STYXL1 gene_id:51657|Hs108|chr7 (217 aa) initn: 1112 init1: 1112 opt: 1112 Z-score: 1355.7 bits: 258.5 E(32554): 3.4e-69 Smith-Waterman score: 1274; 69.3% identity (69.3% similar) in 313 aa overlap (1-313:1-217) 10 20 30 40 50 60 pF1KE5 MPGLLLCEPTELYNILNQATKLSRLTDPNYLCLLDVRSKWEYDESHVITALRVKKKNNEY ::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS83 MPGLLLCEPTELYNILNQATKLSRLTDPNYLCLLDVRSKWEYDESHVITALRVKK----- 10 20 30 40 50 70 80 90 100 110 120 pF1KE5 LLPESVDLECVKYCVVYDNNSSTLEILLKDDDDDSDSDGDGKDLVPQAAIEYGRILTRLT CCDS83 ------------------------------------------------------------ 130 140 150 160 170 180 pF1KE5 HHPVYILKGGYERFSGTYHFLRTQKIIWMPQELDAFQPYPIEIVPGKVFVGNFSQACDPK ::::::::::::::::::::::::::::: CCDS83 -------------------------------ELDAFQPYPIEIVPGKVFVGNFSQACDPK 60 70 80 190 200 210 220 230 240 pF1KE5 IQKDLKIKAHVNVSMDTGPFFAGDADKLLHIRIEDSPEAQILPFLRHMCHFIEIHHHLGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS83 IQKDLKIKAHVNVSMDTGPFFAGDADKLLHIRIEDSPEAQILPFLRHMCHFIEIHHHLGS 90 100 110 120 130 140 250 260 270 280 290 300 pF1KE5 VILIFSTQGISRSCAAIIAYLMHSNEQTLQRSWAYVKKCKNNMCPNRGLVSQLLEWEKTI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS83 VILIFSTQGISRSCAAIIAYLMHSNEQTLQRSWAYVKKCKNNMCPNRGLVSQLLEWEKTI 150 160 170 180 190 200 310 pF1KE5 LGDSITNIMDPLY ::::::::::::: CCDS83 LGDSITNIMDPLY 210 313 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 00:23:05 2016 done: Tue Nov 8 00:23:05 2016 Total Scan time: 2.150 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]