FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5361, 304 aa 1>>>pF1KE5361 304 - 304 aa - 304 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.4069+/-0.000329; mu= 15.6657+/- 0.021 mean_var=71.7113+/-14.392, 0's: 0 Z-trim(115.2): 19 B-trim: 67 in 1/51 Lambda= 0.151454 statistics sampled from 25550 (25568) to 25550 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.665), E-opt: 0.2 (0.3), width: 16 Scan time: 7.680 The best scores are: opt bits E(85289) NP_644812 (OMIM: 609668) protein phosphatase PTC7 ( 304) 2041 454.9 9.4e-128 >>NP_644812 (OMIM: 609668) protein phosphatase PTC7 homo (304 aa) initn: 2041 init1: 2041 opt: 2041 Z-score: 2414.6 bits: 454.9 E(85289): 9.4e-128 Smith-Waterman score: 2041; 100.0% identity (100.0% similar) in 304 aa overlap (1-304:1-304) 10 20 30 40 50 60 pF1KE5 MFSVLSYGRLVARAVLGGLSQTDPRAGGGGGGDYGLVTAGCGFGKDFRKGLLKKGACYGD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_644 MFSVLSYGRLVARAVLGGLSQTDPRAGGGGGGDYGLVTAGCGFGKDFRKGLLKKGACYGD 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 DACFVARHRSADVLGVADGVGGWRDYGVDPSQFSGTLMRTCERLVKEGRFVPSNPIGILT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_644 DACFVARHRSADVLGVADGVGGWRDYGVDPSQFSGTLMRTCERLVKEGRFVPSNPIGILT 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 TSYCELLQNKVPLLGSSTACIVVLDRTSHRLHTANLGDSGFLVVRGGEVVHRSDEQQHYF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_644 TSYCELLQNKVPLLGSSTACIVVLDRTSHRLHTANLGDSGFLVVRGGEVVHRSDEQQHYF 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 NTPFQLSIAPPEAEGVVLSDSPDAADSTSFDVQLGDIILTATDGLFDNMPDYMILQELKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_644 NTPFQLSIAPPEAEGVVLSDSPDAADSTSFDVQLGDIILTATDGLFDNMPDYMILQELKK 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 LKNSNYESIQQTARSIAEQAHELAYDPNYMSPFAQFACDNGLNVRGGKPDDITVLLSIVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_644 LKNSNYESIQQTARSIAEQAHELAYDPNYMSPFAQFACDNGLNVRGGKPDDITVLLSIVA 250 260 270 280 290 300 pF1KE5 EYTD :::: NP_644 EYTD 304 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 00:06:55 2016 done: Tue Nov 8 00:06:56 2016 Total Scan time: 7.680 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]