Result of FASTA (omim) for
pFN21AE5359
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE5359, 307 aa
1>>>pF1KE5359 307 - 307 aa - 307 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.3049+/-0.000413; mu= 15.2229+/- 0.026
mean_var=70.8822+/-14.250, 0's: 0 Z-trim(110.7): 265 B-trim: 1131 in 1/51
Lambda= 0.152337
statistics sampled from 18872 (19164) to 18872 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.596), E-opt: 0.2 (0.225), width: 16
Scan time: 5.490
The best scores are: opt bits E(85289)
NP_068605 (OMIM: 113730,601665) mitochondrial brow ( 307) 1997 448.4 8.5e-126
XP_005263263 (OMIM: 113730,601665) PREDICTED: mito ( 306) 1980 444.6 1.1e-124
XP_011530530 (OMIM: 113730,601665) PREDICTED: mito ( 277) 1757 395.6 5.9e-110
NP_003346 (OMIM: 601693,607447) mitochondrial unco ( 309) 1191 271.2 1.8e-72
NP_003347 (OMIM: 601665,602044) mitochondrial unco ( 312) 1182 269.3 7.2e-72
NP_073714 (OMIM: 601665,602044) mitochondrial unco ( 275) 1035 236.9 3.4e-62
NP_001269127 (OMIM: 300242) brain mitochondrial ca ( 290) 597 140.7 3.4e-33
NP_001269125 (OMIM: 300242) brain mitochondrial ca ( 322) 597 140.7 3.7e-33
NP_001269124 (OMIM: 300242) brain mitochondrial ca ( 325) 597 140.7 3.7e-33
XP_011529704 (OMIM: 300242) PREDICTED: brain mitoc ( 334) 597 140.7 3.8e-33
NP_001010875 (OMIM: 610793) kidney mitochondrial c ( 291) 594 140.0 5.4e-33
XP_016876013 (OMIM: 610793) PREDICTED: kidney mito ( 291) 594 140.0 5.4e-33
NP_003553 (OMIM: 604165) mitochondrial 2-oxoglutar ( 314) 586 138.3 1.9e-32
XP_016885425 (OMIM: 300242) PREDICTED: brain mitoc ( 306) 571 135.0 1.9e-31
XP_016885428 (OMIM: 300242) PREDICTED: brain mitoc ( 338) 571 135.0 2e-31
XP_016885427 (OMIM: 300242) PREDICTED: brain mitoc ( 341) 571 135.0 2e-31
XP_016885426 (OMIM: 300242) PREDICTED: brain mitoc ( 350) 571 135.0 2.1e-31
NP_001158889 (OMIM: 604165) mitochondrial 2-oxoglu ( 303) 565 133.7 4.6e-31
NP_036272 (OMIM: 606794) mitochondrial dicarboxyla ( 287) 562 133.0 7e-31
NP_004268 (OMIM: 613725) mitochondrial uncoupling ( 323) 507 120.9 3.3e-27
XP_016879709 (OMIM: 606794) PREDICTED: mitochondri ( 244) 503 120.0 4.9e-27
NP_001273735 (OMIM: 610793) kidney mitochondrial c ( 240) 488 116.7 4.8e-26
NP_001158890 (OMIM: 604165) mitochondrial 2-oxoglu ( 263) 475 113.8 3.7e-25
NP_001190980 (OMIM: 613725) mitochondrial uncoupli ( 300) 465 111.7 1.9e-24
XP_005249540 (OMIM: 613725) PREDICTED: mitochondri ( 310) 465 111.7 1.9e-24
XP_005262546 (OMIM: 300242) PREDICTED: brain mitoc ( 224) 453 109.0 9.3e-24
XP_005266379 (OMIM: 610793) PREDICTED: kidney mito ( 254) 453 109.0 1e-23
XP_006719856 (OMIM: 610793) PREDICTED: kidney mito ( 293) 453 109.0 1.2e-23
XP_005266378 (OMIM: 610793) PREDICTED: kidney mito ( 293) 453 109.0 1.2e-23
XP_016876012 (OMIM: 610793) PREDICTED: kidney mito ( 293) 453 109.0 1.2e-23
XP_006719857 (OMIM: 610793) PREDICTED: kidney mito ( 293) 453 109.0 1.2e-23
NP_001273736 (OMIM: 610793) kidney mitochondrial c ( 216) 448 107.9 1.9e-23
XP_011533329 (OMIM: 610793) PREDICTED: kidney mito ( 216) 448 107.9 1.9e-23
XP_016885429 (OMIM: 300242) PREDICTED: brain mitoc ( 240) 427 103.3 5.2e-22
NP_001257817 (OMIM: 606794) mitochondrial dicarbox ( 296) 420 101.8 1.8e-21
XP_016867001 (OMIM: 613725) PREDICTED: mitochondri ( 195) 392 95.5 9e-20
XP_016885431 (OMIM: 300242) PREDICTED: brain mitoc ( 197) 383 93.5 3.6e-19
XP_016885430 (OMIM: 300242) PREDICTED: brain mitoc ( 197) 383 93.5 3.6e-19
NP_997231 (OMIM: 610817) solute carrier family 25 ( 304) 385 94.1 3.8e-19
NP_005975 (OMIM: 190315,615182) tricarboxylate tra ( 311) 372 91.2 2.8e-18
NP_001243463 (OMIM: 190315,615182) tricarboxylate ( 318) 361 88.8 1.5e-17
XP_011510372 (OMIM: 603667,612949) PREDICTED: calc ( 587) 355 87.7 6.2e-17
NP_003696 (OMIM: 603667,612949) calcium-binding mi ( 678) 355 87.7 6.9e-17
XP_016885432 (OMIM: 300242) PREDICTED: brain mitoc ( 157) 345 85.1 9.7e-17
NP_000378 (OMIM: 212138,613698) mitochondrial carn ( 301) 345 85.3 1.6e-16
XP_011522148 (OMIM: 610818) PREDICTED: solute carr ( 291) 343 84.9 2.2e-16
NP_958928 (OMIM: 610818) solute carrier family 25 ( 295) 343 84.9 2.2e-16
NP_001307800 (OMIM: 610818) solute carrier family ( 295) 343 84.9 2.2e-16
NP_001307801 (OMIM: 610818) solute carrier family ( 295) 343 84.9 2.2e-16
NP_001307799 (OMIM: 610818) solute carrier family ( 300) 343 84.9 2.2e-16
>>NP_068605 (OMIM: 113730,601665) mitochondrial brown fa (307 aa)
initn: 1997 init1: 1997 opt: 1997 Z-score: 2379.4 bits: 448.4 E(85289): 8.5e-126
Smith-Waterman score: 1997; 100.0% identity (100.0% similar) in 307 aa overlap (1-307:1-307)
10 20 30 40 50 60
pF1KE5 MGGLTASDVHPTLGVQLFSAGIAACLADVITFPLDTAKVRLQVQGECPTSSVIRYKGVLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 MGGLTASDVHPTLGVQLFSAGIAACLADVITFPLDTAKVRLQVQGECPTSSVIRYKGVLG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 TITAVVKTEGRMKLYSGLPAGLQRQISSASLRIGLYDTVQEFLTAGKETAPSLGSKILAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 TITAVVKTEGRMKLYSGLPAGLQRQISSASLRIGLYDTVQEFLTAGKETAPSLGSKILAG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 LTTGGVAVFIGQPTEVVKVRLQAQSHLHGIKPRYTGTYNAYRIIATTEGLTGLWKGTTPN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 LTTGGVAVFIGQPTEVVKVRLQAQSHLHGIKPRYTGTYNAYRIIATTEGLTGLWKGTTPN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 LMRSVIINCTELVTYDLMKEAFVKNNILADDVPCHLVSALIAGFCATAMSSPVDVVKTRF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 LMRSVIINCTELVTYDLMKEAFVKNNILADDVPCHLVSALIAGFCATAMSSPVDVVKTRF
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 INSPPGQYKSVPNCAMKVFTNEGPTAFFKGLVPSFLRLGSWNVIMFVCFEQLKRELSKSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 INSPPGQYKSVPNCAMKVFTNEGPTAFFKGLVPSFLRLGSWNVIMFVCFEQLKRELSKSR
250 260 270 280 290 300
pF1KE5 QTMDCAT
:::::::
NP_068 QTMDCAT
>>XP_005263263 (OMIM: 113730,601665) PREDICTED: mitochon (306 aa)
initn: 1978 init1: 1305 opt: 1980 Z-score: 2359.3 bits: 444.6 E(85289): 1.1e-124
Smith-Waterman score: 1980; 99.7% identity (99.7% similar) in 307 aa overlap (1-307:1-306)
10 20 30 40 50 60
pF1KE5 MGGLTASDVHPTLGVQLFSAGIAACLADVITFPLDTAKVRLQVQGECPTSSVIRYKGVLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MGGLTASDVHPTLGVQLFSAGIAACLADVITFPLDTAKVRLQVQGECPTSSVIRYKGVLG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 TITAVVKTEGRMKLYSGLPAGLQRQISSASLRIGLYDTVQEFLTAGKETAPSLGSKILAG
::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::
XP_005 TITAVVKTEGRMKLYSGLPAGLQRQISSASLRIGLYDTVQEFLTAGKET-PSLGSKILAG
70 80 90 100 110
130 140 150 160 170 180
pF1KE5 LTTGGVAVFIGQPTEVVKVRLQAQSHLHGIKPRYTGTYNAYRIIATTEGLTGLWKGTTPN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LTTGGVAVFIGQPTEVVKVRLQAQSHLHGIKPRYTGTYNAYRIIATTEGLTGLWKGTTPN
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE5 LMRSVIINCTELVTYDLMKEAFVKNNILADDVPCHLVSALIAGFCATAMSSPVDVVKTRF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LMRSVIINCTELVTYDLMKEAFVKNNILADDVPCHLVSALIAGFCATAMSSPVDVVKTRF
180 190 200 210 220 230
250 260 270 280 290 300
pF1KE5 INSPPGQYKSVPNCAMKVFTNEGPTAFFKGLVPSFLRLGSWNVIMFVCFEQLKRELSKSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 INSPPGQYKSVPNCAMKVFTNEGPTAFFKGLVPSFLRLGSWNVIMFVCFEQLKRELSKSR
240 250 260 270 280 290
pF1KE5 QTMDCAT
:::::::
XP_005 QTMDCAT
300
>>XP_011530530 (OMIM: 113730,601665) PREDICTED: mitochon (277 aa)
initn: 1905 init1: 1757 opt: 1757 Z-score: 2095.0 bits: 395.6 E(85289): 5.9e-110
Smith-Waterman score: 1757; 99.3% identity (99.6% similar) in 273 aa overlap (1-273:1-273)
10 20 30 40 50 60
pF1KE5 MGGLTASDVHPTLGVQLFSAGIAACLADVITFPLDTAKVRLQVQGECPTSSVIRYKGVLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MGGLTASDVHPTLGVQLFSAGIAACLADVITFPLDTAKVRLQVQGECPTSSVIRYKGVLG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 TITAVVKTEGRMKLYSGLPAGLQRQISSASLRIGLYDTVQEFLTAGKETAPSLGSKILAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TITAVVKTEGRMKLYSGLPAGLQRQISSASLRIGLYDTVQEFLTAGKETAPSLGSKILAG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 LTTGGVAVFIGQPTEVVKVRLQAQSHLHGIKPRYTGTYNAYRIIATTEGLTGLWKGTTPN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LTTGGVAVFIGQPTEVVKVRLQAQSHLHGIKPRYTGTYNAYRIIATTEGLTGLWKGTTPN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 LMRSVIINCTELVTYDLMKEAFVKNNILADDVPCHLVSALIAGFCATAMSSPVDVVKTRF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LMRSVIINCTELVTYDLMKEAFVKNNILADDVPCHLVSALIAGFCATAMSSPVDVVKTRF
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 INSPPGQYKSVPNCAMKVFTNEGPTAFFKGLVPSFLRLGSWNVIMFVCFEQLKRELSKSR
:::::::::::::::::::::::::::::: .:
XP_011 INSPPGQYKSVPNCAMKVFTNEGPTAFFKGKIPHIGK
250 260 270
pF1KE5 QTMDCAT
>>NP_003346 (OMIM: 601693,607447) mitochondrial uncoupli (309 aa)
initn: 1221 init1: 656 opt: 1191 Z-score: 1422.1 bits: 271.2 E(85289): 1.8e-72
Smith-Waterman score: 1191; 59.7% identity (85.0% similar) in 300 aa overlap (1-296:1-298)
10 20 30 40 50
pF1KE5 MGGLTASDVHPTLGVQLFSAGIAACLADVITFPLDTAKVRLQVQGEC--PT--SSVIRYK
: :. :.:: :: :....:: :::.::.:::::::::::::.::: :. .. .:.
NP_003 MVGFKATDVPPTATVKFLGAGTAACIADLITFPLDTAKVRLQIQGESQGPVRATASAQYR
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE5 GVLGTITAVVKTEGRMKLYSGLPAGLQRQISSASLRIGLYDTVQEFLTAGKETAPSLGSK
::.::: ..:.::: .::.:: ::::::.: ::.::::::.:..: : :.: : :.::.
NP_003 GVMGTILTMVRTEGPRSLYNGLVAGLQRQMSFASVRIGLYDSVKQFYTKGSEHA-SIGSR
70 80 90 100 110
120 130 140 150 160 170
pF1KE5 ILAGLTTGGVAVFIGQPTEVVKVRLQAQSHLHGIKPRYTGTYNAYRIIATTEGLTGLWKG
.::: :::..:: ..:::.:::::.:::.. : . :: .: :::. :: ::. :::::
NP_003 LLAGSTTGALAVAVAQPTDVVKVRFQAQARAGGGR-RYQSTVNAYKTIAREEGFRGLWKG
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE5 TTPNLMRSVIINCTELVTYDLMKEAFVKNNILADDVPCHLVSALIAGFCATAMSSPVDVV
:.::. :..:.::.:::::::.:.:..: :...::.:::..::. ::::.:...::::::
NP_003 TSPNVARNAIVNCAELVTYDLIKDALLKANLMTDDLPCHFTSAFGAGFCTTVIASPVDVV
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE5 KTRFINSPPGQYKSVPNCAMKVFTNEGPTAFFKGLVPSFLRLGSWNVIMFVCFEQLKREL
:::..:: :::.:. .::. .. .::: ::.::..:::::::::::.::: .::::: :
NP_003 KTRYMNSALGQYSSAGHCALTMLQKEGPRAFYKGFMPSFLRLGSWNVVMFVTYEQLKRAL
240 250 260 270 280 290
300
pF1KE5 SKSRQTMDCAT
NP_003 MAACTSREAPF
300
>>NP_003347 (OMIM: 601665,602044) mitochondrial uncoupli (312 aa)
initn: 1178 init1: 662 opt: 1182 Z-score: 1411.3 bits: 269.3 E(85289): 7.2e-72
Smith-Waterman score: 1182; 58.7% identity (81.8% similar) in 303 aa overlap (1-298:1-303)
10 20 30 40 50
pF1KE5 MGGLTASDVHPTLGVQLFSAGIAACLADVITFPLDTAKVRLQVQGE---CPTSSVIRYKG
: :: ::: ::..:....:: :::.::..::::::::::::.::: :. ...:.:
NP_003 MVGLKPSDVPPTMAVKFLGAGTAACFADLVTFPLDTAKVRLQIQGENQAVQTARLVQYRG
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE5 VLGTITAVVKTEGRMKLYSGLPAGLQRQISSASLRIGLYDTVQEFLTAGKETAPSLGSKI
::::: ..:.::: . :.:: ::::::.: ::.::::::.:.. : :: ..:
NP_003 VLGTILTMVRTEGPCSPYNGLVAGLQRQMSFASIRIGLYDSVKQVYTPKGADNSSLTTRI
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE5 LAGLTTGGVAVFIGQPTEVVKVRLQAQSHLHGIKP--RYTGTYNAYRIIATTEGLTGLWK
::: :::..:: .:::.:::::.::. :: . .:.::..::: :: ::. ::::
NP_003 LAGCTTGAMAVTCAQPTDVVKVRFQASIHLGPSRSDRKYSGTMDAYRTIAREEGVRGLWK
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE5 GTTPNLMRSVIINCTELVTYDLMKEAFVKNNILADDVPCHLVSALIAGFCATAMSSPVDV
:: ::.::..:.::.:.::::..:: .. ..:.:. :::.:::. ::::::...:::::
NP_003 GTLPNIMRNAIVNCAEVVTYDILKEKLLDYHLLTDNFPCHFVSAFGAGFCATVVASPVDV
190 200 210 220 230 240
240 250 260 270 280 290
pF1KE5 VKTRFINSPPGQYKSVPNCAMKVFTNEGPTAFFKGLVPSFLRLGSWNVIMFVCFEQLKRE
::::..::::::: : .: .:. ..::::::.::..:::::::::::.::: .:::::
NP_003 VKTRYMNSPPGQYFSPLDCMIKMVAQEGPTAFYKGFTPSFLRLGSWNVVMFVTYEQLKRA
250 260 270 280 290 300
300
pF1KE5 LSKSRQTMDCAT
: :
NP_003 LMKVQMLRESPF
310
>>NP_073714 (OMIM: 601665,602044) mitochondrial uncoupli (275 aa)
initn: 1044 init1: 528 opt: 1035 Z-score: 1237.5 bits: 236.9 E(85289): 3.4e-62
Smith-Waterman score: 1035; 57.1% identity (81.1% similar) in 275 aa overlap (1-270:1-275)
10 20 30 40 50
pF1KE5 MGGLTASDVHPTLGVQLFSAGIAACLADVITFPLDTAKVRLQVQGE---CPTSSVIRYKG
: :: ::: ::..:....:: :::.::..::::::::::::.::: :. ...:.:
NP_073 MVGLKPSDVPPTMAVKFLGAGTAACFADLVTFPLDTAKVRLQIQGENQAVQTARLVQYRG
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE5 VLGTITAVVKTEGRMKLYSGLPAGLQRQISSASLRIGLYDTVQEFLTAGKETAPSLGSKI
::::: ..:.::: . :.:: ::::::.: ::.::::::.:.. : :: ..:
NP_073 VLGTILTMVRTEGPCSPYNGLVAGLQRQMSFASIRIGLYDSVKQVYTPKGADNSSLTTRI
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE5 LAGLTTGGVAVFIGQPTEVVKVRLQAQSHLHGIKP--RYTGTYNAYRIIATTEGLTGLWK
::: :::..:: .:::.:::::.::. :: . .:.::..::: :: ::. ::::
NP_073 LAGCTTGAMAVTCAQPTDVVKVRFQASIHLGPSRSDRKYSGTMDAYRTIAREEGVRGLWK
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE5 GTTPNLMRSVIINCTELVTYDLMKEAFVKNNILADDVPCHLVSALIAGFCATAMSSPVDV
:: ::.::..:.::.:.::::..:: .. ..:.:. :::.:::. ::::::...:::::
NP_073 GTLPNIMRNAIVNCAEVVTYDILKEKLLDYHLLTDNFPCHFVSAFGAGFCATVVASPVDV
190 200 210 220 230 240
240 250 260 270 280 290
pF1KE5 VKTRFINSPPGQYKSVPNCAMKVFTNEGPTAFFKGLVPSFLRLGSWNVIMFVCFEQLKRE
::::..::::::: : .: .:. ..::::::.::
NP_073 VKTRYMNSPPGQYFSPLDCMIKMVAQEGPTAFYKG
250 260 270
300
pF1KE5 LSKSRQTMDCAT
>>NP_001269127 (OMIM: 300242) brain mitochondrial carrie (290 aa)
initn: 549 init1: 203 opt: 597 Z-score: 716.9 bits: 140.7 E(85289): 3.4e-33
Smith-Waterman score: 597; 34.9% identity (70.8% similar) in 281 aa overlap (21-294:13-287)
10 20 30 40 50
pF1KE5 MGGLTASDVHPTLGVQLFSAGIAACLADVITFPLDTAKVRLQVQGECPTSSV--IRYKGV
:.:. .:. :::.: .:.::::::. . :.:.:.
NP_001 MSGLNWKPFVYGGLASIVAEFGTFPVDLTKTRLQVQGQSIDARFKEIKYRGM
10 20 30 40 50
60 70 80 90 100 110
pF1KE5 LGTITAVVKTEGRMKLYSGLPAGLQRQISSASLRIGLYDTVQEFLTAGKETAPSLGSKIL
. .. . : :: . ::::. .: :: : ....::.:........ : .: ...
NP_001 FHALFRICKEEGVLALYSGIAPALLRQASYGTIKIGIYQSLKRLFVERLEDE-TLLINMI
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE5 AGLTTGGVAVFIGQPTEVVKVRLQAQSHLHGIKPRYTGTYNAYRIIATTEGLTGLWKGTT
:...: .. :..::.:.:.:.:::. : .. . :.. : :: :::.:..
NP_001 CGVVSGVISSTIANPTDVLKIRMQAQGSL--FQGSMIGSFID---IYQQEGTRGLWRGVV
120 130 140 150 160
180 190 200 210 220 230
pF1KE5 PNLMRSVIINCTELVTYDLMKEAFVKNNILADDVPCHLVSALIAGFCATAMSSPVDVVKT
:. .:..:. .:: .::. :. .. .....: . :.::.. :. .. :.:::::.:
NP_001 PTAQRAAIVVGVELPVYDITKKHLILSGMMGDTILTHFVSSFTCGLAGALASNPVDVVRT
170 180 190 200 210 220
240 250 260 270 280 290
pF1KE5 RFINSPP--GQ---YKSVPNCAMKVFTNEGPTAFFKGLVPSFLRLGSWNVIMFVCFEQLK
:..:. :. ::.. . .:.. .:: :..::. :..:::: ::.:.:. .::::
NP_001 RMMNQRAIVGHVDLYKGTVDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLK
230 240 250 260 270 280
300
pF1KE5 RELSKSRQTMDCAT
:
NP_001 RLQI
290
>>NP_001269125 (OMIM: 300242) brain mitochondrial carrie (322 aa)
initn: 549 init1: 203 opt: 597 Z-score: 716.3 bits: 140.7 E(85289): 3.7e-33
Smith-Waterman score: 597; 34.9% identity (70.8% similar) in 281 aa overlap (21-294:45-319)
10 20 30 40 50
pF1KE5 MGGLTASDVHPTLGVQLFSAGIAACLADVITFPLDTAKVRLQVQGECPTS
:.:. .:. :::.: .:.::::::. .
NP_001 KFATAAVIHQKSTTVSHEMSGLNWKPFVYGGLASIVAEFGTFPVDLTKTRLQVQGQSIDA
20 30 40 50 60 70
60 70 80 90 100
pF1KE5 SV--IRYKGVLGTITAVVKTEGRMKLYSGLPAGLQRQISSASLRIGLYDTVQEFLTAGKE
:.:.:.. .. . : :: . ::::. .: :: : ....::.:........ :
NP_001 RFKEIKYRGMFHALFRICKEEGVLALYSGIAPALLRQASYGTIKIGIYQSLKRLFVERLE
80 90 100 110 120 130
110 120 130 140 150 160
pF1KE5 TAPSLGSKILAGLTTGGVAVFIGQPTEVVKVRLQAQSHLHGIKPRYTGTYNAYRIIATTE
.: ... :...: .. :..::.:.:.:.:::. : .. . :.. : :
NP_001 DE-TLLINMICGVVSGVISSTIANPTDVLKIRMQAQGSL--FQGSMIGSFID---IYQQE
140 150 160 170 180
170 180 190 200 210 220
pF1KE5 GLTGLWKGTTPNLMRSVIINCTELVTYDLMKEAFVKNNILADDVPCHLVSALIAGFCATA
: :::.:..:. .:..:. .:: .::. :. .. .....: . :.::.. :. ..
NP_001 GTRGLWRGVVPTAQRAAIVVGVELPVYDITKKHLILSGMMGDTILTHFVSSFTCGLAGAL
190 200 210 220 230 240
230 240 250 260 270 280
pF1KE5 MSSPVDVVKTRFINSPP--GQ---YKSVPNCAMKVFTNEGPTAFFKGLVPSFLRLGSWNV
:.:::::.::..:. :. ::.. . .:.. .:: :..::. :..:::: ::.
NP_001 ASNPVDVVRTRMMNQRAIVGHVDLYKGTVDGILKMWKHEGFFALYKGFWPNWLRLGPWNI
250 260 270 280 290 300
290 300
pF1KE5 IMFVCFEQLKRELSKSRQTMDCAT
:.:. .:::::
NP_001 IFFITYEQLKRLQI
310 320
>>NP_001269124 (OMIM: 300242) brain mitochondrial carrie (325 aa)
initn: 549 init1: 203 opt: 597 Z-score: 716.2 bits: 140.7 E(85289): 3.7e-33
Smith-Waterman score: 597; 34.9% identity (70.8% similar) in 281 aa overlap (21-294:48-322)
10 20 30 40 50
pF1KE5 MGGLTASDVHPTLGVQLFSAGIAACLADVITFPLDTAKVRLQVQGECPTS
:.:. .:. :::.: .:.::::::. .
NP_001 TAAVIVSGHQKSTTVSHEMSGLNWKPFVYGGLASIVAEFGTFPVDLTKTRLQVQGQSIDA
20 30 40 50 60 70
60 70 80 90 100
pF1KE5 SV--IRYKGVLGTITAVVKTEGRMKLYSGLPAGLQRQISSASLRIGLYDTVQEFLTAGKE
:.:.:.. .. . : :: . ::::. .: :: : ....::.:........ :
NP_001 RFKEIKYRGMFHALFRICKEEGVLALYSGIAPALLRQASYGTIKIGIYQSLKRLFVERLE
80 90 100 110 120 130
110 120 130 140 150 160
pF1KE5 TAPSLGSKILAGLTTGGVAVFIGQPTEVVKVRLQAQSHLHGIKPRYTGTYNAYRIIATTE
.: ... :...: .. :..::.:.:.:.:::. : .. . :.. : :
NP_001 DE-TLLINMICGVVSGVISSTIANPTDVLKIRMQAQGSL--FQGSMIGSFID---IYQQE
140 150 160 170 180 190
170 180 190 200 210 220
pF1KE5 GLTGLWKGTTPNLMRSVIINCTELVTYDLMKEAFVKNNILADDVPCHLVSALIAGFCATA
: :::.:..:. .:..:. .:: .::. :. .. .....: . :.::.. :. ..
NP_001 GTRGLWRGVVPTAQRAAIVVGVELPVYDITKKHLILSGMMGDTILTHFVSSFTCGLAGAL
200 210 220 230 240 250
230 240 250 260 270 280
pF1KE5 MSSPVDVVKTRFINSPP--GQ---YKSVPNCAMKVFTNEGPTAFFKGLVPSFLRLGSWNV
:.:::::.::..:. :. ::.. . .:.. .:: :..::. :..:::: ::.
NP_001 ASNPVDVVRTRMMNQRAIVGHVDLYKGTVDGILKMWKHEGFFALYKGFWPNWLRLGPWNI
260 270 280 290 300 310
290 300
pF1KE5 IMFVCFEQLKRELSKSRQTMDCAT
:.:. .:::::
NP_001 IFFITYEQLKRLQI
320
>>XP_011529704 (OMIM: 300242) PREDICTED: brain mitochond (334 aa)
initn: 549 init1: 203 opt: 597 Z-score: 716.0 bits: 140.7 E(85289): 3.8e-33
Smith-Waterman score: 597; 34.9% identity (70.8% similar) in 281 aa overlap (21-294:57-331)
10 20 30 40 50
pF1KE5 MGGLTASDVHPTLGVQLFSAGIAACLADVITFPLDTAKVRLQVQGECPTS
:.:. .:. :::.: .:.::::::. .
XP_011 SKHLHCISHQKSTTVSHEMSGLNWKPFVYGGLASIVAEFGTFPVDLTKTRLQVQGQSIDA
30 40 50 60 70 80
60 70 80 90 100
pF1KE5 SV--IRYKGVLGTITAVVKTEGRMKLYSGLPAGLQRQISSASLRIGLYDTVQEFLTAGKE
:.:.:.. .. . : :: . ::::. .: :: : ....::.:........ :
XP_011 RFKEIKYRGMFHALFRICKEEGVLALYSGIAPALLRQASYGTIKIGIYQSLKRLFVERLE
90 100 110 120 130 140
110 120 130 140 150 160
pF1KE5 TAPSLGSKILAGLTTGGVAVFIGQPTEVVKVRLQAQSHLHGIKPRYTGTYNAYRIIATTE
.: ... :...: .. :..::.:.:.:.:::. : .. . :.. : :
XP_011 DE-TLLINMICGVVSGVISSTIANPTDVLKIRMQAQGSL--FQGSMIGSFID---IYQQE
150 160 170 180 190 200
170 180 190 200 210 220
pF1KE5 GLTGLWKGTTPNLMRSVIINCTELVTYDLMKEAFVKNNILADDVPCHLVSALIAGFCATA
: :::.:..:. .:..:. .:: .::. :. .. .....: . :.::.. :. ..
XP_011 GTRGLWRGVVPTAQRAAIVVGVELPVYDITKKHLILSGMMGDTILTHFVSSFTCGLAGAL
210 220 230 240 250 260
230 240 250 260 270 280
pF1KE5 MSSPVDVVKTRFINSPP--GQ---YKSVPNCAMKVFTNEGPTAFFKGLVPSFLRLGSWNV
:.:::::.::..:. :. ::.. . .:.. .:: :..::. :..:::: ::.
XP_011 ASNPVDVVRTRMMNQRAIVGHVDLYKGTVDGILKMWKHEGFFALYKGFWPNWLRLGPWNI
270 280 290 300 310 320
290 300
pF1KE5 IMFVCFEQLKRELSKSRQTMDCAT
:.:. .:::::
XP_011 IFFITYEQLKRLQI
330
307 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 00:05:46 2016 done: Tue Nov 8 00:05:47 2016
Total Scan time: 5.490 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]