Result of FASTA (ccds) for
pFN21AE5356
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE5356, 309 aa
1>>>pF1KE5356 309 - 309 aa - 309 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.7829+/-0.000919; mu= 9.9024+/- 0.056
mean_var=117.9184+/-22.572, 0's: 0 Z-trim(109.2): 39 B-trim: 241 in 1/52
Lambda= 0.118109
statistics sampled from 10684 (10718) to 10684 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.694), E-opt: 0.2 (0.329), width: 16
Scan time: 2.430
The best scores are: opt bits E(32554)
CCDS45246.1 CAPN3 gene_id:825|Hs108|chr15 ( 309) 2080 365.1 3.9e-101
CCDS45245.1 CAPN3 gene_id:825|Hs108|chr15 ( 821) 2080 365.4 8.5e-101
CCDS32207.1 CAPN3 gene_id:825|Hs108|chr15 ( 815) 2023 355.7 7.1e-98
CCDS10085.1 CAPN3 gene_id:825|Hs108|chr15 ( 729) 1271 227.5 2.4e-59
CCDS10086.1 CAPN3 gene_id:825|Hs108|chr15 ( 156) 1071 193.0 1.3e-49
CCDS12489.1 CAPNS1 gene_id:826|Hs108|chr19 ( 268) 753 138.9 4.1e-33
CCDS44644.1 CAPN1 gene_id:823|Hs108|chr11 ( 714) 744 137.7 2.6e-32
CCDS54010.1 CAPNS2 gene_id:84290|Hs108|chr16 ( 248) 709 131.4 6.9e-31
CCDS81431.1 CAPN9 gene_id:10753|Hs108|chr1 ( 627) 626 117.5 2.6e-26
CCDS31053.1 CAPN9 gene_id:10753|Hs108|chr1 ( 664) 626 117.6 2.7e-26
CCDS1586.1 CAPN9 gene_id:10753|Hs108|chr1 ( 690) 626 117.6 2.8e-26
CCDS53478.1 CAPN2 gene_id:824|Hs108|chr1 ( 622) 594 112.1 1.1e-24
CCDS31035.1 CAPN2 gene_id:824|Hs108|chr1 ( 700) 594 112.1 1.3e-24
CCDS47436.1 CAPN11 gene_id:11131|Hs108|chr6 ( 739) 586 110.8 3.4e-24
CCDS73038.1 CAPN8 gene_id:388743|Hs108|chr1 ( 703) 555 105.5 1.3e-22
CCDS47638.1 SRI gene_id:6717|Hs108|chr7 ( 183) 362 72.2 3.4e-13
CCDS12519.1 CAPN12 gene_id:147968|Hs108|chr19 ( 719) 371 74.1 3.5e-13
CCDS5612.1 SRI gene_id:6717|Hs108|chr7 ( 198) 362 72.2 3.6e-13
CCDS59063.1 SRI gene_id:6717|Hs108|chr7 ( 180) 352 70.5 1.1e-12
CCDS82527.1 GCA gene_id:25801|Hs108|chr2 ( 198) 349 70.0 1.7e-12
CCDS2218.1 GCA gene_id:25801|Hs108|chr2 ( 217) 349 70.0 1.8e-12
CCDS46254.1 CAPN14 gene_id:440854|Hs108|chr2 ( 684) 338 68.5 1.7e-11
CCDS46252.1 CAPN13 gene_id:92291|Hs108|chr2 ( 669) 332 67.5 3.3e-11
>>CCDS45246.1 CAPN3 gene_id:825|Hs108|chr15 (309 aa)
initn: 2080 init1: 2080 opt: 2080 Z-score: 1929.2 bits: 365.1 E(32554): 3.9e-101
Smith-Waterman score: 2080; 100.0% identity (100.0% similar) in 309 aa overlap (1-309:1-309)
10 20 30 40 50 60
pF1KE5 MHGNKQHLQKDFFLYNASKARSKTYINMREVSQRFRLPPSEYVIVPSTYEPHQEGEFILR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 MHGNKQHLQKDFFLYNASKARSKTYINMREVSQRFRLPPSEYVIVPSTYEPHQEGEFILR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 VFSEKRNLSEEVENTISVDRPVKKKKTKPIIFVSDRANSNKELGVDQESEEGKGKTSPDK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 VFSEKRNLSEEVENTISVDRPVKKKKTKPIIFVSDRANSNKELGVDQESEEGKGKTSPDK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 QKQSPQPQPGSSDQESEEQQQFRNIFKQIAGDDMEICADELKKVLNTVVNKHKDLKTHGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 QKQSPQPQPGSSDQESEEQQQFRNIFKQIAGDDMEICADELKKVLNTVVNKHKDLKTHGF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 TLESCRSMIALMDTDGSGKLNLQEFHHLWNKIKAWQKIFKHYDTDQSGTINSYEMRNAVN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 TLESCRSMIALMDTDGSGKLNLQEFHHLWNKIKAWQKIFKHYDTDQSGTINSYEMRNAVN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 DAGFHLNNQLYDIITMRYADKHMNIDFDSFICCFVRLEGMFRAFHAFDKDGDGIIKLNVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 DAGFHLNNQLYDIITMRYADKHMNIDFDSFICCFVRLEGMFRAFHAFDKDGDGIIKLNVL
250 260 270 280 290 300
pF1KE5 EWLQLTMYA
:::::::::
CCDS45 EWLQLTMYA
>>CCDS45245.1 CAPN3 gene_id:825|Hs108|chr15 (821 aa)
initn: 2080 init1: 2080 opt: 2080 Z-score: 1923.1 bits: 365.4 E(32554): 8.5e-101
Smith-Waterman score: 2080; 100.0% identity (100.0% similar) in 309 aa overlap (1-309:513-821)
10 20 30
pF1KE5 MHGNKQHLQKDFFLYNASKARSKTYINMRE
::::::::::::::::::::::::::::::
CCDS45 ALMQKNRRKDRKLGASLFTIGFAIYEVPKEMHGNKQHLQKDFFLYNASKARSKTYINMRE
490 500 510 520 530 540
40 50 60 70 80 90
pF1KE5 VSQRFRLPPSEYVIVPSTYEPHQEGEFILRVFSEKRNLSEEVENTISVDRPVKKKKTKPI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 VSQRFRLPPSEYVIVPSTYEPHQEGEFILRVFSEKRNLSEEVENTISVDRPVKKKKTKPI
550 560 570 580 590 600
100 110 120 130 140 150
pF1KE5 IFVSDRANSNKELGVDQESEEGKGKTSPDKQKQSPQPQPGSSDQESEEQQQFRNIFKQIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 IFVSDRANSNKELGVDQESEEGKGKTSPDKQKQSPQPQPGSSDQESEEQQQFRNIFKQIA
610 620 630 640 650 660
160 170 180 190 200 210
pF1KE5 GDDMEICADELKKVLNTVVNKHKDLKTHGFTLESCRSMIALMDTDGSGKLNLQEFHHLWN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 GDDMEICADELKKVLNTVVNKHKDLKTHGFTLESCRSMIALMDTDGSGKLNLQEFHHLWN
670 680 690 700 710 720
220 230 240 250 260 270
pF1KE5 KIKAWQKIFKHYDTDQSGTINSYEMRNAVNDAGFHLNNQLYDIITMRYADKHMNIDFDSF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 KIKAWQKIFKHYDTDQSGTINSYEMRNAVNDAGFHLNNQLYDIITMRYADKHMNIDFDSF
730 740 750 760 770 780
280 290 300
pF1KE5 ICCFVRLEGMFRAFHAFDKDGDGIIKLNVLEWLQLTMYA
:::::::::::::::::::::::::::::::::::::::
CCDS45 ICCFVRLEGMFRAFHAFDKDGDGIIKLNVLEWLQLTMYA
790 800 810 820
>>CCDS32207.1 CAPN3 gene_id:825|Hs108|chr15 (815 aa)
initn: 1517 init1: 1517 opt: 2023 Z-score: 1870.6 bits: 355.7 E(32554): 7.1e-98
Smith-Waterman score: 2023; 98.1% identity (98.1% similar) in 309 aa overlap (1-309:513-815)
10 20 30
pF1KE5 MHGNKQHLQKDFFLYNASKARSKTYINMRE
::::::::::::::::::::::::::::::
CCDS32 ALMQKNRRKDRKLGASLFTIGFAIYEVPKEMHGNKQHLQKDFFLYNASKARSKTYINMRE
490 500 510 520 530 540
40 50 60 70 80 90
pF1KE5 VSQRFRLPPSEYVIVPSTYEPHQEGEFILRVFSEKRNLSEEVENTISVDRPVKKKKTKPI
:::::::::::::::::::::::::::::::::::::::::::::::::::: ::
CCDS32 VSQRFRLPPSEYVIVPSTYEPHQEGEFILRVFSEKRNLSEEVENTISVDRPV------PI
550 560 570 580 590
100 110 120 130 140 150
pF1KE5 IFVSDRANSNKELGVDQESEEGKGKTSPDKQKQSPQPQPGSSDQESEEQQQFRNIFKQIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 IFVSDRANSNKELGVDQESEEGKGKTSPDKQKQSPQPQPGSSDQESEEQQQFRNIFKQIA
600 610 620 630 640 650
160 170 180 190 200 210
pF1KE5 GDDMEICADELKKVLNTVVNKHKDLKTHGFTLESCRSMIALMDTDGSGKLNLQEFHHLWN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 GDDMEICADELKKVLNTVVNKHKDLKTHGFTLESCRSMIALMDTDGSGKLNLQEFHHLWN
660 670 680 690 700 710
220 230 240 250 260 270
pF1KE5 KIKAWQKIFKHYDTDQSGTINSYEMRNAVNDAGFHLNNQLYDIITMRYADKHMNIDFDSF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 KIKAWQKIFKHYDTDQSGTINSYEMRNAVNDAGFHLNNQLYDIITMRYADKHMNIDFDSF
720 730 740 750 760 770
280 290 300
pF1KE5 ICCFVRLEGMFRAFHAFDKDGDGIIKLNVLEWLQLTMYA
:::::::::::::::::::::::::::::::::::::::
CCDS32 ICCFVRLEGMFRAFHAFDKDGDGIIKLNVLEWLQLTMYA
780 790 800 810
>>CCDS10085.1 CAPN3 gene_id:825|Hs108|chr15 (729 aa)
initn: 1264 init1: 1264 opt: 1271 Z-score: 1178.8 bits: 227.5 E(32554): 2.4e-59
Smith-Waterman score: 1698; 85.8% identity (85.8% similar) in 309 aa overlap (1-309:465-729)
10 20 30
pF1KE5 MHGNKQHLQKDFFLYNASKARSKTYINMRE
::::::::::::::::::::::::::::::
CCDS10 ALMQKNRRKDRKLGASLFTIGFAIYEVPKEMHGNKQHLQKDFFLYNASKARSKTYINMRE
440 450 460 470 480 490
40 50 60 70 80 90
pF1KE5 VSQRFRLPPSEYVIVPSTYEPHQEGEFILRVFSEKRNLSEEVENTISVDRPVKKKKTKPI
::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 VSQRFRLPPSEYVIVPSTYEPHQEGEFILRVFSEKRNLSEEVENTISVDRPV--------
500 510 520 530 540
100 110 120 130 140 150
pF1KE5 IFVSDRANSNKELGVDQESEEGKGKTSPDKQKQSPQPQPGSSDQESEEQQQFRNIFKQIA
::::::::::::::::::::::::
CCDS10 ------------------------------------PQPGSSDQESEEQQQFRNIFKQIA
550 560 570
160 170 180 190 200 210
pF1KE5 GDDMEICADELKKVLNTVVNKHKDLKTHGFTLESCRSMIALMDTDGSGKLNLQEFHHLWN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 GDDMEICADELKKVLNTVVNKHKDLKTHGFTLESCRSMIALMDTDGSGKLNLQEFHHLWN
580 590 600 610 620 630
220 230 240 250 260 270
pF1KE5 KIKAWQKIFKHYDTDQSGTINSYEMRNAVNDAGFHLNNQLYDIITMRYADKHMNIDFDSF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 KIKAWQKIFKHYDTDQSGTINSYEMRNAVNDAGFHLNNQLYDIITMRYADKHMNIDFDSF
640 650 660 670 680 690
280 290 300
pF1KE5 ICCFVRLEGMFRAFHAFDKDGDGIIKLNVLEWLQLTMYA
:::::::::::::::::::::::::::::::::::::::
CCDS10 ICCFVRLEGMFRAFHAFDKDGDGIIKLNVLEWLQLTMYA
700 710 720
>>CCDS10086.1 CAPN3 gene_id:825|Hs108|chr15 (156 aa)
initn: 1071 init1: 1071 opt: 1071 Z-score: 1004.3 bits: 193.0 E(32554): 1.3e-49
Smith-Waterman score: 1071; 100.0% identity (100.0% similar) in 156 aa overlap (154-309:1-156)
130 140 150 160 170 180
pF1KE5 SPQPQPGSSDQESEEQQQFRNIFKQIAGDDMEICADELKKVLNTVVNKHKDLKTHGFTLE
::::::::::::::::::::::::::::::
CCDS10 MEICADELKKVLNTVVNKHKDLKTHGFTLE
10 20 30
190 200 210 220 230 240
pF1KE5 SCRSMIALMDTDGSGKLNLQEFHHLWNKIKAWQKIFKHYDTDQSGTINSYEMRNAVNDAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 SCRSMIALMDTDGSGKLNLQEFHHLWNKIKAWQKIFKHYDTDQSGTINSYEMRNAVNDAG
40 50 60 70 80 90
250 260 270 280 290 300
pF1KE5 FHLNNQLYDIITMRYADKHMNIDFDSFICCFVRLEGMFRAFHAFDKDGDGIIKLNVLEWL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 FHLNNQLYDIITMRYADKHMNIDFDSFICCFVRLEGMFRAFHAFDKDGDGIIKLNVLEWL
100 110 120 130 140 150
pF1KE5 QLTMYA
::::::
CCDS10 QLTMYA
>>CCDS12489.1 CAPNS1 gene_id:826|Hs108|chr19 (268 aa)
initn: 818 init1: 744 opt: 753 Z-score: 708.1 bits: 138.9 E(32554): 4.1e-33
Smith-Waterman score: 753; 54.6% identity (80.9% similar) in 194 aa overlap (122-309:75-268)
100 110 120 130 140
pF1KE5 FVSDRANSNKELGVDQESEEGKGKTSPDKQKQSPQPQPGSSD------QESEEQQQFRNI
. .:.: : . .:::: .::: .
CCDS12 GGGGGGGGGGGGTAMRILGGVISAISEAAAQYNPEPPPPRTHYSNIEANESEEVRQFRRL
50 60 70 80 90 100
150 160 170 180 190 200
pF1KE5 FKQIAGDDMEICADELKKVLNTVVNKHKDLKTHGFTLESCRSMIALMDTDGSGKLNLQEF
: :.::::::. : :: ..:: ::..: :::: :: ...::::.:.::.: .:::...::
CCDS12 FAQLAGDDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEF
110 120 130 140 150 160
210 220 230 240 250 260
pF1KE5 HHLWNKIKAWQKIFKHYDTDQSGTINSYEMRNAVNDAGFHLNNQLYDIITMRYADKHMNI
..:::.:: :: :.:..:::.:::: : :. .: . ::::::..::..: ::.:. :.
CCDS12 KYLWNNIKRWQAIYKQFDTDRSGTICSSELPGAFEAAGFHLNEHLYNMIIRRYSDESGNM
170 180 190 200 210 220
270 280 290 300
pF1KE5 DFDSFICCFVRLEGMFRAFHAFDKDGDGIIKLNVLEWLQLTMYA
:::.:: :.:::..:::::...:::: : :..:. ::::::::.
CCDS12 DFDNFISCLVRLDAMFRAFKSLDKDGTGQIQVNIQEWLQLTMYS
230 240 250 260
>>CCDS44644.1 CAPN1 gene_id:823|Hs108|chr11 (714 aa)
initn: 988 init1: 667 opt: 744 Z-score: 693.6 bits: 137.7 E(32554): 2.6e-32
Smith-Waterman score: 935; 46.5% identity (72.3% similar) in 303 aa overlap (7-309:459-714)
10 20 30
pF1KE5 MHGNKQHLQKDFFLYNASKARSKTYINMREVSQRFR
::..:::: :::.:::. .::.:::: :::
CCDS44 RRERRFGRDMETIGFAVYEVPPELVGQPAVHLKRDFFLANASRARSEQFINLREVSTRFR
430 440 450 460 470 480
40 50 60 70 80 90
pF1KE5 LPPSEYVIVPSTYEPHQEGEFILRVFSEKRNLSEEVENTISVDRPVKKKKTKPIIFVSDR
:::.:::.::::.::..::.:.:: :::: . :... : .
CCDS44 LPPGEYVVVPSTFEPNKEGDFVLRFFSEKSAGTVELDDQI-------------------Q
490 500 510 520
100 110 120 130 140 150
pF1KE5 ANSNKELGVDQESEEGKGKTSPDKQKQSPQPQPGSSDQESEEQQQFRNIFKQIAGDDMEI
:: ::.: : : : ...:. .:.:.::.::::
CCDS44 ANL------------------PDEQVLS----------EEEIDENFKALFRQLAGEDMEI
530 540 550 560
160 170 180 190 200 210
pF1KE5 CADELKKVLNTVVNKHKDLKTHGFTLESCRSMIALMDTDGSGKLNLQEFHHLWNKIKAWQ
. ::. .:: ...:::::.:.::.:::::::. ::: ::.:::.: ::. :::.:. .
CCDS44 SVKELRTILNRIISKHKDLRTKGFSLESCRSMVNLMDRDGNGKLGLVEFNILWNRIRNYL
570 580 590 600 610 620
220 230 240 250 260 270
pF1KE5 KIFKHYDTDQSGTINSYEMRNAVNDAGFHLNNQLYDIITMRYADKHMNIDFDSFICCFVR
.::...: :.::....:::: :...:::.::..::..: ::.. . .:::.:.::.::
CCDS44 SIFRKFDLDKSGSMSAYEMRMAIESAGFKLNKKLYELIITRYSEPDLAVDFDNFVCCLVR
630 640 650 660 670 680
280 290 300
pF1KE5 LEGMFRAFHAFDKDGDGIIKLNVLEWLQLTMYA
:: ::: :...: : ::.. .....::::::.:
CCDS44 LETMFRFFKTLDTDLDGVVTFDLFKWLQLTMFA
690 700 710
>>CCDS54010.1 CAPNS2 gene_id:84290|Hs108|chr16 (248 aa)
initn: 700 init1: 700 opt: 709 Z-score: 668.0 bits: 131.4 E(32554): 6.9e-31
Smith-Waterman score: 709; 49.5% identity (84.0% similar) in 194 aa overlap (122-309:55-248)
100 110 120 130 140
pF1KE5 FVSDRANSNKELGVDQESEEGKGKTSPDKQKQSPQPQPGSSD------QESEEQQQFRNI
. .:.: : .. .:::: ..::.
CCDS54 GGGQRREGGGRNIGGIVGGIVNFISEAAAAQYTPEPPPTQQHFTSVEASESEEVRRFRQQ
30 40 50 60 70 80
150 160 170 180 190 200
pF1KE5 FKQIAGDDMEICADELKKVLNTVVNKHKDLKTHGFTLESCRSMIALMDTDGSGKLNLQEF
: :.:: :::. : .: ..:: :..::::::: ::.:..:::....::.: .:::...::
CCDS54 FTQLAGPDMEVGATDLMNILNKVLSKHKDLKTDGFSLDTCRSIVSVMDSDTTGKLGFEEF
90 100 110 120 130 140
210 220 230 240 250 260
pF1KE5 HHLWNKIKAWQKIFKHYDTDQSGTINSYEMRNAVNDAGFHLNNQLYDIITMRYADKHMNI
..:::.:: :: ..:.:: :.::...: ..:.:.. :::.::.:::..:. :::.. ..
CCDS54 KYLWNNIKKWQCVYKQYDRDHSGSLGSSQLRGALQAAGFQLNEQLYQMIVRRYANEDGDM
150 160 170 180 190 200
270 280 290 300
pF1KE5 DFDSFICCFVRLEGMFRAFHAFDKDGDGIIKLNVLEWLQLTMYA
::..:: :.:::..:::::...:.: ::.:.... ::::::::.
CCDS54 DFNNFISCLVRLDAMFRAFKSLDRDRDGLIQVSIKEWLQLTMYS
210 220 230 240
>>CCDS81431.1 CAPN9 gene_id:10753|Hs108|chr1 (627 aa)
initn: 626 init1: 626 opt: 626 Z-score: 585.8 bits: 117.5 E(32554): 2.6e-26
Smith-Waterman score: 882; 43.4% identity (77.2% similar) in 302 aa overlap (6-307:367-625)
10 20 30
pF1KE5 MHGNKQHLQKDFFLYNASKARSKTYINMREVSQRF
.::.:::: :.::.:::::.::.::::.::
CCDS81 LMQKDRRKLKRFGANVLTIGYAIYECPDKDEHLNKDFFRYHASRARSKTFINLREVSDRF
340 350 360 370 380 390
40 50 60 70 80 90
pF1KE5 RLPPSEYVIVPSTYEPHQEGEFILRVFSEKRNLSEEVENTISVDRPVKKKKTKPIIFVSD
.:::.::...:::.:::::..: ::.::::. ...........: : .:
CCDS81 KLPPGEYILIPSTFEPHQEADFCLRIFSEKKAITRDMDGNVDIDLP------EP------
400 410 420 430 440
100 110 120 130 140 150
pF1KE5 RANSNKELGVDQESEEGKGKTSPDKQKQSPQPQPGSSDQESEEQQQFRNIFKQIAGDDME
:.: : :::.::.:.:: .:.:.::.:::
CCDS81 -----------------------------PKPTP--PDQETEEEQRFRALFEQVAGEDME
450 460 470
160 170 180 190 200 210
pF1KE5 ICADELKKVLNTVVNKHKDLKTHGFTLESCRSMIALMDTDGSGKLNLQEFHHLWNKIKAW
. :.::. :::.:..:.::.: . ..: ::...:.::::.:.:::...::. .:.:.: :
CCDS81 VTAEELEYVLNAVLQKKKDIKFKKLSLISCKNIISLMDTSGNGKLEFDEFKVFWDKLKQW
480 490 500 510 520 530
220 230 240 250 260 270
pF1KE5 QKIFKHYDTDQSGTINSYEMRNAVNDAGFHLNNQLYDIITMRYADKHMNIDFDSFICCFV
..: ..:.:.:::...::.:.:.. :::.:...: ..:..::::.....:::.:. :.:
CCDS81 INLFLRFDADKSGTMSTYELRTALKAAGFQLSSHLLQLIVLRYADEELQLDFDDFLNCLV
540 550 560 570 580 590
280 290 300
pF1KE5 RLEGMFRAFHAFDKDGDGIIKLNVLEWLQLTMYA
:::. :.:.:.. . .:.::. :...:::
CCDS81 RLENASRVFQALSTKNKEFIHLNINEFIHLTMNI
600 610 620
>>CCDS31053.1 CAPN9 gene_id:10753|Hs108|chr1 (664 aa)
initn: 626 init1: 626 opt: 626 Z-score: 585.4 bits: 117.6 E(32554): 2.7e-26
Smith-Waterman score: 882; 43.4% identity (77.2% similar) in 302 aa overlap (6-307:404-662)
10 20 30
pF1KE5 MHGNKQHLQKDFFLYNASKARSKTYINMREVSQRF
.::.:::: :.::.:::::.::.::::.::
CCDS31 LMQKDRRKLKRFGANVLTIGYAIYECPDKDEHLNKDFFRYHASRARSKTFINLREVSDRF
380 390 400 410 420 430
40 50 60 70 80 90
pF1KE5 RLPPSEYVIVPSTYEPHQEGEFILRVFSEKRNLSEEVENTISVDRPVKKKKTKPIIFVSD
.:::.::...:::.:::::..: ::.::::. ...........: : .:
CCDS31 KLPPGEYILIPSTFEPHQEADFCLRIFSEKKAITRDMDGNVDIDLP------EP------
440 450 460 470 480
100 110 120 130 140 150
pF1KE5 RANSNKELGVDQESEEGKGKTSPDKQKQSPQPQPGSSDQESEEQQQFRNIFKQIAGDDME
:.: : :::.::.:.:: .:.:.::.:::
CCDS31 -----------------------------PKPTP--PDQETEEEQRFRALFEQVAGEDME
490 500 510
160 170 180 190 200 210
pF1KE5 ICADELKKVLNTVVNKHKDLKTHGFTLESCRSMIALMDTDGSGKLNLQEFHHLWNKIKAW
. :.::. :::.:..:.::.: . ..: ::...:.::::.:.:::...::. .:.:.: :
CCDS31 VTAEELEYVLNAVLQKKKDIKFKKLSLISCKNIISLMDTSGNGKLEFDEFKVFWDKLKQW
520 530 540 550 560 570
220 230 240 250 260 270
pF1KE5 QKIFKHYDTDQSGTINSYEMRNAVNDAGFHLNNQLYDIITMRYADKHMNIDFDSFICCFV
..: ..:.:.:::...::.:.:.. :::.:...: ..:..::::.....:::.:. :.:
CCDS31 INLFLRFDADKSGTMSTYELRTALKAAGFQLSSHLLQLIVLRYADEELQLDFDDFLNCLV
580 590 600 610 620 630
280 290 300
pF1KE5 RLEGMFRAFHAFDKDGDGIIKLNVLEWLQLTMYA
:::. :.:.:.. . .:.::. :...:::
CCDS31 RLENASRVFQALSTKNKEFIHLNINEFIHLTMNI
640 650 660
309 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 00:04:30 2016 done: Tue Nov 8 00:04:31 2016
Total Scan time: 2.430 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]