Result of FASTA (ccds) for
pFN21AE5347
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE5347, 288 aa
1>>>pF1KE5347 288 - 288 aa - 288 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.3041+/-0.000852; mu= 14.6193+/- 0.051
mean_var=60.6944+/-12.424, 0's: 0 Z-trim(105.2): 28 B-trim: 0 in 0/49
Lambda= 0.164627
statistics sampled from 8274 (8301) to 8274 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.623), E-opt: 0.2 (0.255), width: 16
Scan time: 2.420
The best scores are: opt bits E(32554)
CCDS12023.1 PLPP2 gene_id:8612|Hs108|chr19 ( 288) 1948 471.2 3.9e-133
CCDS12024.1 PLPP2 gene_id:8612|Hs108|chr19 ( 309) 1832 443.7 8.1e-125
CCDS45889.1 PLPP2 gene_id:8612|Hs108|chr19 ( 232) 1558 378.5 2.4e-105
CCDS34159.1 PLPP1 gene_id:8611|Hs108|chr5 ( 284) 1084 266.0 2.3e-71
CCDS34160.1 PLPP1 gene_id:8611|Hs108|chr5 ( 285) 1024 251.7 4.4e-67
CCDS604.1 PLPP3 gene_id:8613|Hs108|chr1 ( 311) 862 213.3 1.8e-55
CCDS30779.1 PLPPR5 gene_id:163404|Hs108|chr1 ( 316) 377 98.1 8.8e-21
CCDS30778.1 PLPPR5 gene_id:163404|Hs108|chr1 ( 321) 368 96.0 3.9e-20
CCDS12258.1 PLPPR2 gene_id:64748|Hs108|chr19 ( 343) 308 81.7 8.1e-16
CCDS6751.1 PLPPR1 gene_id:54886|Hs108|chr9 ( 325) 302 80.3 2.1e-15
CCDS59352.1 PLPPR2 gene_id:64748|Hs108|chr19 ( 427) 300 79.9 3.6e-15
CCDS58636.1 PLPPR3 gene_id:79948|Hs108|chr19 ( 718) 277 74.5 2.5e-13
CCDS757.1 PLPPR4 gene_id:9890|Hs108|chr1 ( 763) 273 73.6 5.2e-13
CCDS47841.1 PLPP5 gene_id:84513|Hs108|chr8 ( 264) 264 71.2 9e-13
CCDS41573.1 PLPP4 gene_id:196051|Hs108|chr10 ( 271) 238 65.1 6.6e-11
>>CCDS12023.1 PLPP2 gene_id:8612|Hs108|chr19 (288 aa)
initn: 1948 init1: 1948 opt: 1948 Z-score: 2503.8 bits: 471.2 E(32554): 3.9e-133
Smith-Waterman score: 1948; 100.0% identity (100.0% similar) in 288 aa overlap (1-288:1-288)
10 20 30 40 50 60
pF1KE5 MQRRWVFVLLDVLCLLVASLPFAILTLVNAPYKRGFYCGDDSIRYPYRPDTITHGLMAGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 MQRRWVFVLLDVLCLLVASLPFAILTLVNAPYKRGFYCGDDSIRYPYRPDTITHGLMAGV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 TITATVILVSAGEAYLVYTDRLYSRSDFNNYVAAVYKVLGTFLFGAAVSQSLTDLAKYMI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 TITATVILVSAGEAYLVYTDRLYSRSDFNNYVAAVYKVLGTFLFGAAVSQSLTDLAKYMI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 GRLRPNFLAVCDPDWSRVNCSVYVQLEKVCRGNPADVTEARLSFYSGHSSFGMYCMVFLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 GRLRPNFLAVCDPDWSRVNCSVYVQLEKVCRGNPADVTEARLSFYSGHSSFGMYCMVFLA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 LYVQARLCWKWARLLRPTVQFFLVAFALYVGYTRVSDYKHHWSDVLVGLLQGALVAALTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 LYVQARLCWKWARLLRPTVQFFLVAFALYVGYTRVSDYKHHWSDVLVGLLQGALVAALTV
190 200 210 220 230 240
250 260 270 280
pF1KE5 CYISDFFKARPPQHCLKEEELERKPSLSLTLTLGEADHNHYGYPHSSS
::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 CYISDFFKARPPQHCLKEEELERKPSLSLTLTLGEADHNHYGYPHSSS
250 260 270 280
>>CCDS12024.1 PLPP2 gene_id:8612|Hs108|chr19 (309 aa)
initn: 1832 init1: 1832 opt: 1832 Z-score: 2354.4 bits: 443.7 E(32554): 8.1e-125
Smith-Waterman score: 1832; 99.6% identity (99.6% similar) in 273 aa overlap (16-288:37-309)
10 20 30 40
pF1KE5 MQRRWVFVLLDVLCLLVASLPFAILTLVNAPYKRGFYCGDDSIRY
: ::::::::::::::::::::::::::::
CCDS12 PGSRGQHPPPRQQEVCAEGPRARLHPAPPGLGASLPFAILTLVNAPYKRGFYCGDDSIRY
10 20 30 40 50 60
50 60 70 80 90 100
pF1KE5 PYRPDTITHGLMAGVTITATVILVSAGEAYLVYTDRLYSRSDFNNYVAAVYKVLGTFLFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 PYRPDTITHGLMAGVTITATVILVSAGEAYLVYTDRLYSRSDFNNYVAAVYKVLGTFLFG
70 80 90 100 110 120
110 120 130 140 150 160
pF1KE5 AAVSQSLTDLAKYMIGRLRPNFLAVCDPDWSRVNCSVYVQLEKVCRGNPADVTEARLSFY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 AAVSQSLTDLAKYMIGRLRPNFLAVCDPDWSRVNCSVYVQLEKVCRGNPADVTEARLSFY
130 140 150 160 170 180
170 180 190 200 210 220
pF1KE5 SGHSSFGMYCMVFLALYVQARLCWKWARLLRPTVQFFLVAFALYVGYTRVSDYKHHWSDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 SGHSSFGMYCMVFLALYVQARLCWKWARLLRPTVQFFLVAFALYVGYTRVSDYKHHWSDV
190 200 210 220 230 240
230 240 250 260 270 280
pF1KE5 LVGLLQGALVAALTVCYISDFFKARPPQHCLKEEELERKPSLSLTLTLGEADHNHYGYPH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 LVGLLQGALVAALTVCYISDFFKARPPQHCLKEEELERKPSLSLTLTLGEADHNHYGYPH
250 260 270 280 290 300
pF1KE5 SSS
:::
CCDS12 SSS
>>CCDS45889.1 PLPP2 gene_id:8612|Hs108|chr19 (232 aa)
initn: 1558 init1: 1558 opt: 1558 Z-score: 2004.6 bits: 378.5 E(32554): 2.4e-105
Smith-Waterman score: 1558; 100.0% identity (100.0% similar) in 232 aa overlap (57-288:1-232)
30 40 50 60 70 80
pF1KE5 LVNAPYKRGFYCGDDSIRYPYRPDTITHGLMAGVTITATVILVSAGEAYLVYTDRLYSRS
::::::::::::::::::::::::::::::
CCDS45 MAGVTITATVILVSAGEAYLVYTDRLYSRS
10 20 30
90 100 110 120 130 140
pF1KE5 DFNNYVAAVYKVLGTFLFGAAVSQSLTDLAKYMIGRLRPNFLAVCDPDWSRVNCSVYVQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 DFNNYVAAVYKVLGTFLFGAAVSQSLTDLAKYMIGRLRPNFLAVCDPDWSRVNCSVYVQL
40 50 60 70 80 90
150 160 170 180 190 200
pF1KE5 EKVCRGNPADVTEARLSFYSGHSSFGMYCMVFLALYVQARLCWKWARLLRPTVQFFLVAF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 EKVCRGNPADVTEARLSFYSGHSSFGMYCMVFLALYVQARLCWKWARLLRPTVQFFLVAF
100 110 120 130 140 150
210 220 230 240 250 260
pF1KE5 ALYVGYTRVSDYKHHWSDVLVGLLQGALVAALTVCYISDFFKARPPQHCLKEEELERKPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 ALYVGYTRVSDYKHHWSDVLVGLLQGALVAALTVCYISDFFKARPPQHCLKEEELERKPS
160 170 180 190 200 210
270 280
pF1KE5 LSLTLTLGEADHNHYGYPHSSS
::::::::::::::::::::::
CCDS45 LSLTLTLGEADHNHYGYPHSSS
220 230
>>CCDS34159.1 PLPP1 gene_id:8611|Hs108|chr5 (284 aa)
initn: 1074 init1: 808 opt: 1084 Z-score: 1394.8 bits: 266.0 E(32554): 2.3e-71
Smith-Waterman score: 1084; 58.0% identity (78.7% similar) in 286 aa overlap (2-285:4-282)
10 20 30 40 50
pF1KE5 MQRRWVFVLLDVLCLLVASLPFAILTLVNAPYKRGFYCGDDSIRYPYRPDTITHGLMA
. : .: :::::.:.:.::::::: ..:..:: .:.:.::.:::. ::: ..:..
CCDS34 MFDKTRLPYVALDVLCVLLAGLPFAILTSRHTPFQRGVFCNDESIKYPYKEDTIPYALLG
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE5 GVTITATVILVSAGEAYLVYTDRLYSRSDF-NNYVAAVYKVLGTFLFGAAVSQSLTDLAK
:. : ..:.. ::. :: . :.: : . :::.:..::..::::::::.::::::.::
CCDS34 GIIIPFSIIVIILGETLSVYCNLLHSNSFIRNNYIATIYKAIGTFLFGAAASQSLTDIAK
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE5 YMIGRLRPNFLAVCDPDWSRVNCSV-YVQLEKVCRGNPADVTEARLSFYSGHSSFGMYCM
: ::::::.:: :::::::..::: :.. .:::: : :.:::::::::::.::::
CCDS34 YSIGRLRPHFLDVCDPDWSKINCSDGYIEYY-ICRGNAERVKEGRLSFYSGHSSFSMYCM
130 140 150 160 170
180 190 200 210 220 230
pF1KE5 VFLALYVQARLCWKWARLLRPTVQFFLVAFALYVGYTRVSDYKHHWSDVLVGLLQGALVA
.:.:::.:::. ::::::::.:: ::: ..::: .:::::::::::::.::.::::::
CCDS34 LFVALYLQARMKGDWARLLRPTLQFGLVAVSIYVGLSRVSDYKHHWSDVLTGLIQGALVA
180 190 200 210 220 230
240 250 260 270 280
pF1KE5 ALTVCYISDFFKARPPQHCLKEEELERKPSLSLTLTLGEADHNHYGYPHSSS
:.. :.::::: : . :::. . .: : : : ::: :
CCDS34 ILVAVYVSDFFKERTSFKERKEED--SHTTLHETPTTG----NHYPSNHQP
240 250 260 270 280
>>CCDS34160.1 PLPP1 gene_id:8611|Hs108|chr5 (285 aa)
initn: 1008 init1: 808 opt: 1024 Z-score: 1317.8 bits: 251.7 E(32554): 4.4e-67
Smith-Waterman score: 1024; 56.1% identity (75.6% similar) in 287 aa overlap (2-285:4-283)
10 20 30 40 50
pF1KE5 MQRRWVFVLLDVLCLLVASLPFAILTLVNA-PYKRGFYCGDDSIRYPYRPDTITHGLM
. : .: :::::.:.::.:.:.: : . :..:::.: :.:: :::. .:.: ..
CCDS34 MFDKTRLPYVALDVLCVLLASMPMAVLKLGQIYPFQRGFFCKDNSINYPYHDSTVTSTVL
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE5 AGVTITATVILVSAGEAYLVYTDRLYSRSDF-NNYVAAVYKVLGTFLFGAAVSQSLTDLA
: . . . ::. :: . :.: : . :::.:..::..::::::::.::::::.:
CCDS34 ILVGVGLPISSIILGETLSVYCNLLHSNSFIRNNYIATIYKAIGTFLFGAAASQSLTDIA
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE5 KYMIGRLRPNFLAVCDPDWSRVNCSV-YVQLEKVCRGNPADVTEARLSFYSGHSSFGMYC
:: ::::::.:: :::::::..::: :.. .:::: : :.:::::::::::.:::
CCDS34 KYSIGRLRPHFLDVCDPDWSKINCSDGYIEYY-ICRGNAERVKEGRLSFYSGHSSFSMYC
130 140 150 160 170
180 190 200 210 220 230
pF1KE5 MVFLALYVQARLCWKWARLLRPTVQFFLVAFALYVGYTRVSDYKHHWSDVLVGLLQGALV
:.:.:::.:::. ::::::::.:: ::: ..::: .:::::::::::::.::.:::::
CCDS34 MLFVALYLQARMKGDWARLLRPTLQFGLVAVSIYVGLSRVSDYKHHWSDVLTGLIQGALV
180 190 200 210 220 230
240 250 260 270 280
pF1KE5 AALTVCYISDFFKARPPQHCLKEEELERKPSLSLTLTLGEADHNHYGYPHSSS
: :.. :.::::: : . :::. . .: : : : ::: :
CCDS34 AILVAVYVSDFFKERTSFKERKEED--SHTTLHETPTTG----NHYPSNHQP
240 250 260 270 280
>>CCDS604.1 PLPP3 gene_id:8613|Hs108|chr1 (311 aa)
initn: 837 init1: 692 opt: 862 Z-score: 1109.3 bits: 213.3 E(32554): 1.8e-55
Smith-Waterman score: 862; 52.0% identity (79.8% similar) in 252 aa overlap (3-250:32-281)
10 20 30
pF1KE5 MQRRWVFVLLDVLCLLVASLPFAIL-TLVNAP
.: ... ::..::..:.::: :. : . :
CCDS60 QNYKYDKAIVPESKNGGSPALNNNPRRSGSKRVLLICLDLFCLFMAGLPFLIIETSTIKP
10 20 30 40 50 60
40 50 60 70 80 90
pF1KE5 YKRGFYCGDDSIRYPYRP-DTITHGLMAGVTITATVILVSAGEAYLVYTDRLYSRSDFNN
:.:::::.:.::.:: . .::. ... .: :. ... . .:: : .: . ::: ..:
CCDS60 YHRGFYCNDESIKYPLKTGETINDAVLCAVGIVIAILAIITGEFYRIYYLK-KSRSTIQN
70 80 90 100 110 120
100 110 120 130 140
pF1KE5 -YVAAVYKVLGTFLFGAAVSQSLTDLAKYMIGRLRPNFLAVCDPDWSRVNCSV-YVQLEK
::::.:: .: :::: :.:::.::.:: ::::::.::.::.::.:..::: :.: .
CCDS60 PYVAALYKQVGCFLFGCAISQSFTDIAKVSIGRLRPHFLSVCNPDFSQINCSEGYIQNYR
130 140 150 160 170 180
150 160 170 180 190 200
pF1KE5 VCRGNPADVTEARLSFYSGHSSFGMYCMVFLALYVQARLCWKWARLLRPTVQFFLVAFAL
:::. . : ::: ::.:::.::.:: :..:.::.:::. :. :::::: .:: :. .:.
CCDS60 -CRGDDSKVQEARKSFFSGHASFSMYTMLYLVLYLQARFTWRGARLLRPLLQFTLIMMAF
190 200 210 220 230
210 220 230 240 250 260
pF1KE5 YVGYTRVSDYKHHWSDVLVGLLQGALVAALTVCYISDFFKARPPQHCLKEEELERKPSLS
:.: .::::.::: ::::.:. :::::: : ..::.::..
CCDS60 YTGLSRVSDHKHHPSDVLAGFAQGALVACCIVFFVSDLFKTKTTLSLPAPAIRKEILSPV
240 250 260 270 280 290
270 280
pF1KE5 LTLTLGEADHNHYGYPHSSS
CCDS60 DIIDRNNHHNMM
300 310
>>CCDS30779.1 PLPPR5 gene_id:163404|Hs108|chr1 (316 aa)
initn: 401 init1: 227 opt: 377 Z-score: 486.6 bits: 98.1 E(32554): 8.8e-21
Smith-Waterman score: 420; 28.8% identity (62.4% similar) in 274 aa overlap (34-280:41-308)
10 20 30 40 50
pF1KE5 RWVFVLLDVLCLLVASLPFAILTLVNAPYKRGFYCGDDSIRYPYR--------PDTITHG
.::.: :.. : :: : .. ..
CCDS30 SMLYFQMVIMAGTVMLAYYFEYTDTFTVNVQGFFCHDSAYRKPYPGPEDSSAVPPVLLYS
20 30 40 50 60 70
60 70 80 90 100
pF1KE5 LMAGVTITATVILVSAGEAYLVYTDRLYSRSDFNN-----------YVAAVYK----VLG
: ::: . ::.: ::. :. .: .: ::.: :. . . ::
CCDS30 LAAGVPVL--VIIV--GETA-VFCLQLATR-DFENQEKTILTGDCCYINPLVRRTVRFLG
80 90 100 110 120
110 120 130 140 150
pF1KE5 TFLFGAAVSQSLTDLAKYMIGRLRPNFLAVCDPDWSRVNCSVYVQL---EKVCRGNPADV
. :: ... ... .. . : : :.:::.: :... ..:. :.:. :..: ::: .
CCDS30 IYTFGLFATDIFVNAGQVVTGNLAPHFLALCKPNYTALGCQQYTQFISGEEACTGNPDLI
130 140 150 160 170 180
160 170 180 190 200 210
pF1KE5 TEARLSFYSGHSSFGMYCMVFLALYVQARLCWKWARLLRPTVQFFLVAFALYVGYTRVSD
.:: .: : ......: ..:..:. . : .:: .:.. . :. .:. .: .::..
CCDS30 MRARKTFPSKEAALSVYAAMYLTMYITNTIKAKGTRLAKPVLCLGLMCLAFLTGLNRVAE
190 200 210 220 230 240
220 230 240 250 260 270
pF1KE5 YKHHWSDVLVGLLQGALVAA-LTVCYISDFFKARPPQHCLKEEELERKPSLSLTLTLGEA
:..:::::..:.: : .:. :.:: ...: . .. .. ..: . : .:. . .
CCDS30 YRNHWSDVIAGFLVGISIAVFLVVCVVNNFKGRQAENEHIHMDNLAQMPMISIPRVESPL
250 260 270 280 290 300
280
pF1KE5 DHNHYGYPHSSS
..::
CCDS30 EKNHITAFAEVT
310
>>CCDS30778.1 PLPPR5 gene_id:163404|Hs108|chr1 (321 aa)
initn: 401 init1: 227 opt: 368 Z-score: 475.0 bits: 96.0 E(32554): 3.9e-20
Smith-Waterman score: 411; 29.3% identity (62.7% similar) in 263 aa overlap (34-269:41-297)
10 20 30 40 50
pF1KE5 RWVFVLLDVLCLLVASLPFAILTLVNAPYKRGFYCGDDSIRYPYR--------PDTITHG
.::.: :.. : :: : .. ..
CCDS30 SMLYFQMVIMAGTVMLAYYFEYTDTFTVNVQGFFCHDSAYRKPYPGPEDSSAVPPVLLYS
20 30 40 50 60 70
60 70 80 90 100
pF1KE5 LMAGVTITATVILVSAGEAYLVYTDRLYSRSDFNN-----------YVAAVYK----VLG
: ::: . ::.: ::. :. .: .: ::.: :. . . ::
CCDS30 LAAGVPVL--VIIV--GETA-VFCLQLATR-DFENQEKTILTGDCCYINPLVRRTVRFLG
80 90 100 110 120
110 120 130 140 150
pF1KE5 TFLFGAAVSQSLTDLAKYMIGRLRPNFLAVCDPDWSRVNCSVYVQL---EKVCRGNPADV
. :: ... ... .. . : : :.:::.: :... ..:. :.:. :..: ::: .
CCDS30 IYTFGLFATDIFVNAGQVVTGNLAPHFLALCKPNYTALGCQQYTQFISGEEACTGNPDLI
130 140 150 160 170 180
160 170 180 190 200 210
pF1KE5 TEARLSFYSGHSSFGMYCMVFLALYVQARLCWKWARLLRPTVQFFLVAFALYVGYTRVSD
.:: .: : ......: ..:..:. . : .:: .:.. . :. .:. .: .::..
CCDS30 MRARKTFPSKEAALSVYAAMYLTMYITNTIKAKGTRLAKPVLCLGLMCLAFLTGLNRVAE
190 200 210 220 230 240
220 230 240 250 260 270
pF1KE5 YKHHWSDVLVGLLQGALVAA-LTVCYISDFFKARPPQHCLKEEELERKPSLSLTLTLGEA
:..:::::..:.: : .:. :.:: ...: . .. .. ..: . : .:.
CCDS30 YRNHWSDVIAGFLVGISIAVFLVVCVVNNFKGRQAENEHIHMDNLAQMPMISIPRVESPL
250 260 270 280 290 300
280
pF1KE5 DHNHYGYPHSSS
CCDS30 EKVTSVQNHITAFAEVT
310 320
>>CCDS12258.1 PLPPR2 gene_id:64748|Hs108|chr19 (343 aa)
initn: 377 init1: 251 opt: 308 Z-score: 397.5 bits: 81.7 E(32554): 8.1e-16
Smith-Waterman score: 379; 27.4% identity (56.8% similar) in 317 aa overlap (8-287:24-334)
10 20 30 40
pF1KE5 MQRRWVFVLLDVLCLLVASLPFAILTLVNAPYKRGFYCGDDSIR
::: .. ::. : :. :.. .::.: :..
CCDS12 MAGGRPHLKRSFSIIPCFVFVESVLLGIVILLAYRLEFTDTFPVHT---QGFFCYDSTYA
10 20 30 40 50
50 60 70 80
pF1KE5 YPYR--------PDTITHGLM-AGVTITATVILVSAGEAYL---------VYTDRLYSRS
:: : .....:. :: :.: ..: ..:.. . . . : .
CCDS12 KPYPGPEAASRVPPALVYALVTAGPTLT--ILLGELARAFFPAPPSAVPVIGESTIVSGA
60 70 80 90 100 110
90 100 110 120 130 140
pF1KE5 --DFNNYVAAVYKVLGTFLFGAAVSQSLTDLAKYMIGRLRPNFLAVCDPDWSRVNC----
:. : . . ::.. :: .. ... .. . : :.::.:: :... ..:
CCDS12 CCRFSPPVRRLVRFLGVYSFGLFTTTIFANAGQVVTGNPTPHFLSVCRPNYTALGCLPPS
120 130 140 150 160 170
150 160 170 180 190
pF1KE5 ------SVYVQLEKVCRGNPADVTEARLSFYSGHSSFGMYCMVFLALYVQARLCWKWARL
. .: . .: :.:. :. :: .: ... : ... :.:: . : .::
CCDS12 PDRPGPDRFVTDQGACAGSPSLVAAARRAFPCKDAALCAYAVTYTAMYVTLVFRVKGSRL
180 190 200 210 220 230
200 210 220 230 240 250
pF1KE5 LRPTVQFFLVAFALYVGYTRVSDYKHHWSDVLVGLLQGALVAALTVCYISDFFKARPP--
..:.. . :. :. :: .::..:..::::::.:.: :: .:.. : . :..:::
CCDS12 VKPSLCLALLCPAFLVGVVRVAEYRNHWSDVLAGFLTGAAIATFLVTCVVHNFQSRPPSG
240 250 260 270 280 290
260 270 280
pF1KE5 QHCLKEEELERKPSLSLTL-----TLGEADHNHYGYPHSSS
.. :.: . :... : . :. : : : :: :
CCDS12 RRLSPWEDLGQAPTMDSPLEKNPRSAGRIRHRH-GSPHPSRRTAPAVAT
300 310 320 330 340
>>CCDS6751.1 PLPPR1 gene_id:54886|Hs108|chr9 (325 aa)
initn: 315 init1: 171 opt: 302 Z-score: 390.2 bits: 80.3 E(32554): 2.1e-15
Smith-Waterman score: 325; 26.4% identity (59.6% similar) in 235 aa overlap (34-246:46-279)
10 20 30 40 50
pF1KE5 RWVFVLLDVLCLLVASLPFAILTLVNAPYKRGFYCGDDSIRYPYRPDT-----ITHGLMA
.::.: : .. :: : : :: ..
CCDS67 CFIFVELVIMAGTVLLAYYFECTDTFQVHIQGFFCQDGDLMKPY-PGTEEESFITPLVLY
20 30 40 50 60 70
60 70 80 90 100
pF1KE5 GVTITATVILVSAGEA--YLVYTDR--LYSRSD---------FNNYVAAVYKVLGTFLFG
: .. . .. :: :.. . : : .. .: . . . :.: ::
CCDS67 CVLAATPTAIIFIGEISMYFIKSTRESLIAQEKTILTGECCYLNPLLRRIIRFTGVFAFG
80 90 100 110 120 130
110 120 130 140 150 160
pF1KE5 AAVSQSLTDLAKYMIGRLRPNFLAVCDPDWSRVNCSVYVQL---EKVCRGNPADVTEARL
... ... .. . :.: : ::.:: :... ..:... :. ..: :. . .::
CCDS67 LFATDIFVNAGQVVTGHLTPYFLTVCKPNYTSADCQAHHQFINNGNICTGDLEVIEKARR
140 150 160 170 180 190
170 180 190 200 210 220
pF1KE5 SFYSGHSSFGMYCMVFLALYVQARLCWKWARLLRPTVQFFLVAFALYVGYTRVSDYKHHW
:: : :.....: .. ..:. . . : .:: .:.. . . :. .: .:::.:..:
CCDS67 SFPSKHAALSIYSALYATMYITSTIKTKSSRLAKPVLCLGTLCTAFLTGLNRVSEYRNHC
200 210 220 230 240 250
230 240 250 260 270 280
pF1KE5 SDVLVGLLQGALVAA-LTVCYISDFFKARPPQHCLKEEELERKPSLSLTLTLGEADHNHY
:::..:.. :. :: : .: . .:
CCDS67 SDVIAGFILGTAVALFLGMCVVHNFKGTQGSPSKPKPEDPRGVPLMAFPRIESPLETLSA
260 270 280 290 300 310
288 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 23:59:44 2016 done: Mon Nov 7 23:59:45 2016
Total Scan time: 2.420 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]