Result of FASTA (ccds) for
pFN21AE5256
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE5256, 241 aa
1>>>pF1KE5256 241 - 241 aa - 241 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.2070+/-0.000699; mu= 18.1057+/- 0.043
mean_var=100.1292+/-19.390, 0's: 0 Z-trim(113.1): 50 B-trim: 42 in 1/51
Lambda= 0.128172
statistics sampled from 13691 (13742) to 13691 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.761), E-opt: 0.2 (0.422), width: 16
Scan time: 1.950
The best scores are: opt bits E(32554)
CCDS6156.1 RGS20 gene_id:8601|Hs108|chr8 ( 241) 1657 315.7 1.8e-86
CCDS6155.1 RGS20 gene_id:8601|Hs108|chr8 ( 388) 1509 288.5 4.2e-78
CCDS69482.1 RGS20 gene_id:8601|Hs108|chr8 ( 273) 1501 286.9 9.3e-78
CCDS5244.1 RGS17 gene_id:26575|Hs108|chr6 ( 210) 933 181.7 3.2e-46
CCDS13555.1 RGS19 gene_id:10287|Hs108|chr20 ( 217) 850 166.4 1.4e-41
CCDS41448.1 RGS21 gene_id:431704|Hs108|chr1 ( 152) 428 88.2 3.4e-18
CCDS41443.1 RGS8 gene_id:85397|Hs108|chr1 ( 180) 423 87.4 7.1e-18
CCDS1349.1 RGS8 gene_id:85397|Hs108|chr1 ( 198) 423 87.4 7.6e-18
CCDS1374.1 RGS18 gene_id:64407|Hs108|chr1 ( 235) 420 86.9 1.3e-17
CCDS1376.1 RGS13 gene_id:6003|Hs108|chr1 ( 159) 402 83.4 9.7e-17
CCDS44272.1 RGS4 gene_id:5999|Hs108|chr1 ( 187) 399 82.9 1.6e-16
CCDS1243.1 RGS4 gene_id:5999|Hs108|chr1 ( 205) 399 83.0 1.7e-16
CCDS44270.1 RGS4 gene_id:5999|Hs108|chr1 ( 302) 399 83.2 2.2e-16
CCDS1244.1 RGS5 gene_id:8490|Hs108|chr1 ( 181) 396 82.4 2.3e-16
CCDS1377.1 RGS2 gene_id:5997|Hs108|chr1 ( 211) 393 81.9 3.7e-16
CCDS35114.1 RGS3 gene_id:5998|Hs108|chr9 ( 311) 390 81.5 7.1e-16
CCDS6798.1 RGS3 gene_id:5998|Hs108|chr9 ( 519) 390 81.8 1e-15
CCDS1375.2 RGS1 gene_id:5996|Hs108|chr1 ( 209) 385 80.4 1e-15
CCDS65111.1 RGS3 gene_id:5998|Hs108|chr9 ( 591) 390 81.8 1.1e-15
CCDS6797.1 RGS3 gene_id:5998|Hs108|chr9 ( 917) 390 82.0 1.5e-15
CCDS43869.1 RGS3 gene_id:5998|Hs108|chr9 (1198) 390 82.2 1.7e-15
CCDS58041.1 RGS5 gene_id:8490|Hs108|chr1 ( 185) 380 79.4 1.8e-15
CCDS1348.1 RGS16 gene_id:6004|Hs108|chr1 ( 202) 372 78.0 5.3e-15
CCDS60457.1 RGS7 gene_id:6000|Hs108|chr1 ( 424) 373 78.5 7.7e-15
CCDS60458.1 RGS7 gene_id:6000|Hs108|chr1 ( 469) 373 78.6 8.2e-15
CCDS60459.1 RGS7 gene_id:6000|Hs108|chr1 ( 477) 373 78.6 8.3e-15
CCDS31071.1 RGS7 gene_id:6000|Hs108|chr1 ( 487) 373 78.6 8.4e-15
CCDS55924.1 RGS6 gene_id:9628|Hs108|chr14 ( 490) 355 75.3 8.5e-14
CCDS73655.1 RGS6 gene_id:9628|Hs108|chr14 ( 437) 352 74.6 1.2e-13
CCDS9808.1 RGS6 gene_id:9628|Hs108|chr14 ( 472) 352 74.7 1.2e-13
CCDS10403.1 RGS11 gene_id:8786|Hs108|chr16 ( 446) 348 73.9 2e-13
CCDS66884.1 RGS11 gene_id:8786|Hs108|chr16 ( 456) 348 73.9 2e-13
CCDS42088.1 RGS11 gene_id:8786|Hs108|chr16 ( 467) 348 73.9 2e-13
CCDS45764.1 RGS9 gene_id:8787|Hs108|chr17 ( 671) 344 73.4 4.3e-13
CCDS42373.1 RGS9 gene_id:8787|Hs108|chr17 ( 674) 344 73.4 4.3e-13
CCDS41572.1 RGS10 gene_id:6001|Hs108|chr10 ( 167) 328 69.7 1.3e-12
CCDS31294.1 RGS10 gene_id:6001|Hs108|chr10 ( 181) 328 69.8 1.4e-12
CCDS43405.1 RGS14 gene_id:10636|Hs108|chr5 ( 566) 329 70.5 2.6e-12
>>CCDS6156.1 RGS20 gene_id:8601|Hs108|chr8 (241 aa)
initn: 1657 init1: 1657 opt: 1657 Z-score: 1666.0 bits: 315.7 E(32554): 1.8e-86
Smith-Waterman score: 1657; 100.0% identity (100.0% similar) in 241 aa overlap (1-241:1-241)
10 20 30 40 50 60
pF1KE5 MRTADGGEPAGASSPAGRVDGGLQMGSERMEMRKRQMPAAQDTPGAAPGQPGAGSRGSNA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 MRTADGGEPAGASSPAGRVDGGLQMGSERMEMRKRQMPAAQDTPGAAPGQPGAGSRGSNA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 CCFCWCCCCSCSCLTVRNQEDQRPTIASHELRADLPTWEESPAPTLEEVNAWAQSFDKLM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 CCFCWCCCCSCSCLTVRNQEDQRPTIASHELRADLPTWEESPAPTLEEVNAWAQSFDKLM
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 VTPAGRNAFREFLRTEFSEENMLFWMACEELKKEANKNIIEEKARIIYEDYISILSPKEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 VTPAGRNAFREFLRTEFSEENMLFWMACEELKKEANKNIIEEKARIIYEDYISILSPKEV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 SLDSRVREVINRNMVEPSQHIFDDAQLQIYTLMHRDSYPRFMNSAVYKDLLQSLSEKSIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 SLDSRVREVINRNMVEPSQHIFDDAQLQIYTLMHRDSYPRFMNSAVYKDLLQSLSEKSIE
190 200 210 220 230 240
pF1KE5 A
:
CCDS61 A
>>CCDS6155.1 RGS20 gene_id:8601|Hs108|chr8 (388 aa)
initn: 1504 init1: 1504 opt: 1509 Z-score: 1515.6 bits: 288.5 E(32554): 4.2e-78
Smith-Waterman score: 1509; 94.4% identity (96.6% similar) in 234 aa overlap (8-241:155-388)
10 20 30
pF1KE5 MRTADGGEPAGASSPAGRVDGGLQMGSERMEMRKRQM
.: .. ::. . ::::::::::::::
CCDS61 GRLSLLLGAALALPGRPSGGRPLRPPHPVAKPREEDATAGQSSPMPQMGSERMEMRKRQM
130 140 150 160 170 180
40 50 60 70 80 90
pF1KE5 PAAQDTPGAAPGQPGAGSRGSNACCFCWCCCCSCSCLTVRNQEDQRPTIASHELRADLPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 PAAQDTPGAAPGQPGAGSRGSNACCFCWCCCCSCSCLTVRNQEDQRPTIASHELRADLPT
190 200 210 220 230 240
100 110 120 130 140 150
pF1KE5 WEESPAPTLEEVNAWAQSFDKLMVTPAGRNAFREFLRTEFSEENMLFWMACEELKKEANK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 WEESPAPTLEEVNAWAQSFDKLMVTPAGRNAFREFLRTEFSEENMLFWMACEELKKEANK
250 260 270 280 290 300
160 170 180 190 200 210
pF1KE5 NIIEEKARIIYEDYISILSPKEVSLDSRVREVINRNMVEPSQHIFDDAQLQIYTLMHRDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 NIIEEKARIIYEDYISILSPKEVSLDSRVREVINRNMVEPSQHIFDDAQLQIYTLMHRDS
310 320 330 340 350 360
220 230 240
pF1KE5 YPRFMNSAVYKDLLQSLSEKSIEA
::::::::::::::::::::::::
CCDS61 YPRFMNSAVYKDLLQSLSEKSIEA
370 380
>>CCDS69482.1 RGS20 gene_id:8601|Hs108|chr8 (273 aa)
initn: 1501 init1: 1501 opt: 1501 Z-score: 1509.5 bits: 286.9 E(32554): 9.3e-78
Smith-Waterman score: 1501; 100.0% identity (100.0% similar) in 218 aa overlap (24-241:56-273)
10 20 30 40 50
pF1KE5 MRTADGGEPAGASSPAGRVDGGLQMGSERMEMRKRQMPAAQDTPGAAPGQPGA
::::::::::::::::::::::::::::::
CCDS69 LPLFRAQRYNTDIHQITENEGDLRAVPDIKQMGSERMEMRKRQMPAAQDTPGAAPGQPGA
30 40 50 60 70 80
60 70 80 90 100 110
pF1KE5 GSRGSNACCFCWCCCCSCSCLTVRNQEDQRPTIASHELRADLPTWEESPAPTLEEVNAWA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS69 GSRGSNACCFCWCCCCSCSCLTVRNQEDQRPTIASHELRADLPTWEESPAPTLEEVNAWA
90 100 110 120 130 140
120 130 140 150 160 170
pF1KE5 QSFDKLMVTPAGRNAFREFLRTEFSEENMLFWMACEELKKEANKNIIEEKARIIYEDYIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS69 QSFDKLMVTPAGRNAFREFLRTEFSEENMLFWMACEELKKEANKNIIEEKARIIYEDYIS
150 160 170 180 190 200
180 190 200 210 220 230
pF1KE5 ILSPKEVSLDSRVREVINRNMVEPSQHIFDDAQLQIYTLMHRDSYPRFMNSAVYKDLLQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS69 ILSPKEVSLDSRVREVINRNMVEPSQHIFDDAQLQIYTLMHRDSYPRFMNSAVYKDLLQS
210 220 230 240 250 260
240
pF1KE5 LSEKSIEA
::::::::
CCDS69 LSEKSIEA
270
>>CCDS5244.1 RGS17 gene_id:26575|Hs108|chr6 (210 aa)
initn: 1035 init1: 795 opt: 933 Z-score: 943.2 bits: 181.7 E(32554): 3.2e-46
Smith-Waterman score: 933; 63.3% identity (82.3% similar) in 215 aa overlap (32-241:1-210)
10 20 30 40 50 60
pF1KE5 RTADGGEPAGASSPAGRVDGGLQMGSERMEMRKRQMPAAQDTPGAAPGQPGAGSRGSNAC
:::::. . :: :. :: ..: .:.:
CCDS52 MRKRQQSQNEGTP-AVSQAPG-NQRPNNTC
10 20
70 80 90 100 110
pF1KE5 CFCWCCCCSCSCLTVRNQEDQ----RPTIASHELRAD-LPTWEESPAPTLEEVNAWAQSF
:::::::::::::::::.: ::: : . . . . :: :: ::: .:.:.:
CCDS52 CFCWCCCCSCSCLTVRNEERGENAGRPT---HTTKMESIQVLEECQNPTAEEVLSWSQNF
30 40 50 60 70 80
120 130 140 150 160 170
pF1KE5 DKLMVTPAGRNAFREFLRTEFSEENMLFWMACEELKKEANKNIIEEKARIIYEDYISILS
::.: .::::: ::::::::.::::.:::.:::.:::: ::..::::::.::::::::::
CCDS52 DKMMKAPAGRNLFREFLRTEYSEENLLFWLACEDLKKEQNKKVIEEKARMIYEDYISILS
90 100 110 120 130 140
180 190 200 210 220 230
pF1KE5 PKEVSLDSRVREVINRNMVEPSQHIFDDAQLQIYTLMHRDSYPRFMNSAVYKDLLQSLSE
:::::::::::::::::...:. :...::::::::::::::.:::.:: .::....: .
CCDS52 PKEVSLDSRVREVINRNLLDPNPHMYEDAQLQIYTLMHRDSFPRFLNSQIYKSFVESTAG
150 160 170 180 190 200
240
pF1KE5 KSIEA
.: :.
CCDS52 SSSES
210
>>CCDS13555.1 RGS19 gene_id:10287|Hs108|chr20 (217 aa)
initn: 831 init1: 688 opt: 850 Z-score: 860.1 bits: 166.4 E(32554): 1.4e-41
Smith-Waterman score: 850; 62.4% identity (79.0% similar) in 210 aa overlap (38-241:14-217)
10 20 30 40 50 60
pF1KE5 EPAGASSPAGRVDGGLQMGSERMEMRKRQMPAAQDTPGAAPGQ----PGAGSRGSNACCF
: : : . .. :.: :: : ::.
CCDS13 MPTPHEAEKQITGPEEADRPPSMSSHDTASPAAPSR--NPCCL
10 20 30 40
70 80 90 100 110 120
pF1KE5 CWCCCCSCSCLTVRNQEDQRPTIASHELRAD-LPTWEESPAPTLEEVNAWAQSFDKLMVT
::::::::: ::: .: ::.: . . ::. : .:. :::..::::::::: .
CCDS13 CWCCCCSCS----WNQERRRAWQASRESKLQPLPSCEVCATPSPEEVQSWAQSFDKLMHS
50 60 70 80 90
130 140 150 160 170 180
pF1KE5 PAGRNAFREFLRTEFSEENMLFWMACEELKKEANKNIIEEKARIIYEDYISILSPKEVSL
::::..:: :::::.::::::::.:::::: :::.....::::.:::::.::::::::::
CCDS13 PAGRSVFRAFLRTEYSEENMLFWLACEELKAEANQHVVDEKARLIYEDYVSILSPKEVSL
100 110 120 130 140 150
190 200 210 220 230 240
pF1KE5 DSRVREVINRNMVEPSQHIFDDAQLQIYTLMHRDSYPRFMNSAVYKDLL-QSLSEKSIEA
:::::: ::..: ::: : ::::::::::::::::::::..: .:. :: :. :..: ::
CCDS13 DSRVREGINKKMQEPSAHTFDDAQLQIYTLMHRDSYPRFLSSPTYRALLLQGPSQSSSEA
160 170 180 190 200 210
>>CCDS41448.1 RGS21 gene_id:431704|Hs108|chr1 (152 aa)
initn: 407 init1: 387 opt: 428 Z-score: 440.2 bits: 88.2 E(32554): 3.4e-18
Smith-Waterman score: 428; 45.8% identity (78.6% similar) in 131 aa overlap (103-233:10-139)
80 90 100 110 120 130
pF1KE5 CLTVRNQEDQRPTIASHELRADLPTWEESPAPTLEEVNAWAQSFDKLMVTPAGRNAFREF
.:: : .. :....: :... :: .::: :
CCDS41 MPVKCCFYRSPTAETMT-WSENMDTLLANQAGLDAFRIF
10 20 30
140 150 160 170 180 190
pF1KE5 LRTEFSEENMLFWMACEELKKEANKNIIEEKARIIYEDYISILSPKEVSLDSRVREVINR
:..::::::. ::.:::..:: : . : ::..:: ..: .:::...: .:..:..
CCDS41 LKSEFSEENVEFWLACEDFKKTKNADKIASKAKMIYSEFIEADAPKEINIDFGTRDLISK
40 50 60 70 80 90
200 210 220 230 240
pF1KE5 NMVEPSQHIFDDAQLQIYTLMHRDSYPRFMNSAVYKDLLQSLSEKSIEA
:..::. . ::.:: :: :: .::.:::..: .:: :..:
CCDS41 NIAEPTLKCFDEAQKLIYCLMAKDSFPRFLKSEIYKKLVNSQQVPNHKKWLPFL
100 110 120 130 140 150
>>CCDS41443.1 RGS8 gene_id:85397|Hs108|chr1 (180 aa)
initn: 421 init1: 421 opt: 423 Z-score: 434.3 bits: 87.4 E(32554): 7.1e-18
Smith-Waterman score: 423; 45.9% identity (74.8% similar) in 135 aa overlap (105-239:46-179)
80 90 100 110 120 130
pF1KE5 TVRNQEDQRPTIASHELRADLPTWEESPAPTLEEVNAWAQSFDKLMVTPAGRNAFREFLR
. ::.. ::.::: :. : ::: ::.
CCDS41 RLGCLSHKSDSCSDFTAILPDKPNRALKRLSTEEATRWADSFDVLLSHKYGVAAFRAFLK
20 30 40 50 60 70
140 150 160 170 180 190
pF1KE5 TEFSEENMLFWMACEELKKEANKNIIEEKARIIYEDYISILSPKEVSLDSRVREVINRNM
:::::::. ::.::::.:: . . ::. :.:..... .:.::..: ..::. .:.
CCDS41 TEFSEENLEFWLACEEFKKTRSTAKLVSKAHRIFEEFVDVQAPREVNIDFQTREATRKNL
80 90 100 110 120 130
200 210 220 230 240
pF1KE5 VEPSQHIFDDAQLQIYTLMHRDSYPRFMNSAVYKDLLQSLSEKSIEA
::: ::.:: ....::..::::::. : .: ::: : :.. .
CCDS41 QEPSLTCFDQAQGKVHSLMEKDSYPRFLRSKMYLDLL-SQSQRRLS
140 150 160 170 180
>>CCDS1349.1 RGS8 gene_id:85397|Hs108|chr1 (198 aa)
initn: 421 init1: 421 opt: 423 Z-score: 433.8 bits: 87.4 E(32554): 7.6e-18
Smith-Waterman score: 423; 45.9% identity (74.8% similar) in 135 aa overlap (105-239:64-197)
80 90 100 110 120 130
pF1KE5 TVRNQEDQRPTIASHELRADLPTWEESPAPTLEEVNAWAQSFDKLMVTPAGRNAFREFLR
. ::.. ::.::: :. : ::: ::.
CCDS13 RLGCLSHKSDSCSDFTAILPDKPNRALKRLSTEEATRWADSFDVLLSHKYGVAAFRAFLK
40 50 60 70 80 90
140 150 160 170 180 190
pF1KE5 TEFSEENMLFWMACEELKKEANKNIIEEKARIIYEDYISILSPKEVSLDSRVREVINRNM
:::::::. ::.::::.:: . . ::. :.:..... .:.::..: ..::. .:.
CCDS13 TEFSEENLEFWLACEEFKKTRSTAKLVSKAHRIFEEFVDVQAPREVNIDFQTREATRKNL
100 110 120 130 140 150
200 210 220 230 240
pF1KE5 VEPSQHIFDDAQLQIYTLMHRDSYPRFMNSAVYKDLLQSLSEKSIEA
::: ::.:: ....::..::::::. : .: ::: : :.. .
CCDS13 QEPSLTCFDQAQGKVHSLMEKDSYPRFLRSKMYLDLL-SQSQRRLS
160 170 180 190
>>CCDS1374.1 RGS18 gene_id:64407|Hs108|chr1 (235 aa)
initn: 417 init1: 417 opt: 420 Z-score: 429.9 bits: 86.9 E(32554): 1.3e-17
Smith-Waterman score: 420; 42.1% identity (71.1% similar) in 159 aa overlap (79-237:58-208)
50 60 70 80 90 100
pF1KE5 GQPGAGSRGSNACCFCWCCCCSCSCLTVRNQEDQRPTIASHELRADLPTWEESPAPTLEE
.:: : . ..: . : .: ::
CCDS13 SGKEETSKEAKIRAKEKRNRLSLLVQKPEFHEDTRSSRSGHLAK------ETRVSP--EE
30 40 50 60 70
110 120 130 140 150 160
pF1KE5 VNAWAQSFDKLMVTPAGRNAFREFLRTEFSEENMLFWMACEELKKEANKNIIEEKARIIY
. :..:::::. : .:: .::.:::::::. ::.:::..:: . . :. ::. ::
CCDS13 AVKWGESFDKLLSHRDGLEAFTRFLKTEFSEENIEFWIACEDFKKSKGPQQIHLKAKAIY
80 90 100 110 120 130
170 180 190 200 210 220
pF1KE5 EDYISILSPKEVSLDSRVREVINRNMVEPSQHIFDDAQLQIYTLMHRDSYPRFMNSAVYK
: .:. .::::.:: ...:::. ....:. : :: :: ..: ::..::: ::..: .:
CCDS13 EKFIQTDAPKEVNLDFHTKEVITNSITQPTLHSFDAAQSRVYQLMEQDSYTRFLKSDIYL
140 150 160 170 180 190
230 240
pF1KE5 DLLQSLSEKSIEA
::... ..
CCDS13 DLMEGRPQRPTNLRRRSRSFTCNEFQDVQSDVAIWL
200 210 220 230
>>CCDS1376.1 RGS13 gene_id:6003|Hs108|chr1 (159 aa)
initn: 441 init1: 400 opt: 402 Z-score: 414.0 bits: 83.4 E(32554): 9.7e-17
Smith-Waterman score: 402; 45.0% identity (71.4% similar) in 140 aa overlap (99-234:14-153)
70 80 90 100 110 120
pF1KE5 CSCSCLTVRNQEDQRPTIASHELRADLPTWEESPAP----TLEEVNAWAQSFDKLMVTPA
.:: : ::::: :::::..::.:
CCDS13 MSRRNCWICKMCRDESKRPPSNLTLEEVLQWAQSFENLMATKY
10 20 30 40
130 140 150 160 170 180
pF1KE5 GRNAFREFLRTEFSEENMLFWMACEELKKEANKNIIEEKARIIYEDYISILSPKEVSLDS
: .. .:. : :.::. :::::: :: :.. .:. .:. ::. ::.:...::
CCDS13 GPVVYAAYLKMEHSDENIQFWMACETYKKIASRWSRISRAKKLYKIYIQPQSPREINIDS
50 60 70 80 90 100
190 200 210 220 230 240
pF1KE5 RVREVINRNMVEPSQHIFDDAQLQIYTLMHRDSYPRFMNSAVYKDLLQSLSEKSIEA
.::.: ::. ::.. :..:: .: :.:::::::..: .:. ::...
CCDS13 STRETIIRNIQEPTETCFEEAQKIVYMHMERDSYPRFLKSEMYQKLLKTMQSNNSF
110 120 130 140 150
241 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 22:55:15 2016 done: Mon Nov 7 22:55:16 2016
Total Scan time: 1.950 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]