Result of FASTA (omim) for
pFN21AE5242
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE5242, 201 aa
1>>>pF1KE5242 201 - 201 aa - 201 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.3276+/-0.000411; mu= 13.3663+/- 0.026
mean_var=76.7451+/-15.265, 0's: 0 Z-trim(112.2): 140 B-trim: 0 in 0/51
Lambda= 0.146403
statistics sampled from 20853 (21031) to 20853 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.624), E-opt: 0.2 (0.247), width: 16
Scan time: 3.810
The best scores are: opt bits E(85289)
NP_783859 (OMIM: 609538) phosphatidylglycerophosph ( 201) 1316 287.3 1.1e-77
NP_001137456 (OMIM: 609538) phosphatidylglyceropho ( 151) 384 90.4 1.6e-18
XP_016875477 (OMIM: 607175) PREDICTED: dual specif ( 517) 158 43.0 0.00098
XP_005253545 (OMIM: 607175) PREDICTED: dual specif ( 517) 158 43.0 0.00098
XP_006719218 (OMIM: 607175) PREDICTED: dual specif ( 665) 158 43.1 0.0012
XP_011519159 (OMIM: 607175) PREDICTED: dual specif ( 665) 158 43.1 0.0012
XP_011519158 (OMIM: 607175) PREDICTED: dual specif ( 665) 158 43.1 0.0012
NP_085143 (OMIM: 607175) dual specificity protein ( 665) 158 43.1 0.0012
NP_064570 (OMIM: 616778) dual specificity protein ( 184) 143 39.5 0.0039
NP_001273484 (OMIM: 616778) dual specificity prote ( 205) 143 39.6 0.0043
XP_016883145 (OMIM: 616776) PREDICTED: dual specif ( 311) 145 40.1 0.0044
XP_016883144 (OMIM: 616776) PREDICTED: dual specif ( 332) 145 40.1 0.0047
XP_016883143 (OMIM: 616776) PREDICTED: dual specif ( 335) 145 40.2 0.0047
NP_004410 (OMIM: 603069) dual specificity protein ( 384) 144 40.0 0.0061
NP_004408 (OMIM: 600714) dual specificity protein ( 367) 143 39.8 0.0068
XP_016880743 (OMIM: 606779) PREDICTED: protein pho ( 480) 144 40.1 0.0072
NP_001307407 (OMIM: 616776) dual specificity prote ( 232) 138 38.6 0.0098
NP_542178 (OMIM: 616776) dual specificity protein ( 235) 138 38.6 0.0099
>>NP_783859 (OMIM: 609538) phosphatidylglycerophosphatas (201 aa)
initn: 1316 init1: 1316 opt: 1316 Z-score: 1515.6 bits: 287.3 E(85289): 1.1e-77
Smith-Waterman score: 1316; 100.0% identity (100.0% similar) in 201 aa overlap (1-201:1-201)
10 20 30 40 50 60
pF1KE5 MAATALLEAGLARVLFYPTLLYTLFRGKVPGRAHRDWYHRIDPTVLLGALPLRSLTRQLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_783 MAATALLEAGLARVLFYPTLLYTLFRGKVPGRAHRDWYHRIDPTVLLGALPLRSLTRQLV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 QDENVRGVITMNEEYETRFLCNSSQEWKRLGVEQLRLSTVDMTGIPTLDNLQKGVQFALK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_783 QDENVRGVITMNEEYETRFLCNSSQEWKRLGVEQLRLSTVDMTGIPTLDNLQKGVQFALK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 YQSLGQCVYVHCKAGRSRSATMVAAYLIQVHKWSPEEAVRAIAKIRSYIHIRPGQLDVLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_783 YQSLGQCVYVHCKAGRSRSATMVAAYLIQVHKWSPEEAVRAIAKIRSYIHIRPGQLDVLK
130 140 150 160 170 180
190 200
pF1KE5 EFHKQITARATKDGTFVISKT
:::::::::::::::::::::
NP_783 EFHKQITARATKDGTFVISKT
190 200
>>NP_001137456 (OMIM: 609538) phosphatidylglycerophospha (151 aa)
initn: 384 init1: 384 opt: 384 Z-score: 453.5 bits: 90.4 E(85289): 1.6e-18
Smith-Waterman score: 384; 98.3% identity (100.0% similar) in 59 aa overlap (1-59:1-59)
10 20 30 40 50 60
pF1KE5 MAATALLEAGLARVLFYPTLLYTLFRGKVPGRAHRDWYHRIDPTVLLGALPLRSLTRQLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.
NP_001 MAATALLEAGLARVLFYPTLLYTLFRGKVPGRAHRDWYHRIDPTVLLGALPLRSLTRQVS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 QDENVRGVITMNEEYETRFLCNSSQEWKRLGVEQLRLSTVDMTGIPTLDNLQKGVQFALK
NP_001 RAGEPGPLPRPRRSVPVGPLGSPPSLLSHLFASAAGTGRERARGDHHERGVRDEVPVQLF
70 80 90 100 110 120
>>XP_016875477 (OMIM: 607175) PREDICTED: dual specificit (517 aa)
initn: 119 init1: 119 opt: 158 Z-score: 188.0 bits: 43.0 E(85289): 0.00098
Smith-Waterman score: 158; 34.0% identity (58.0% similar) in 100 aa overlap (95-194:59-158)
70 80 90 100 110 120
pF1KE5 VRGVITMNEEYETRFLCNSSQEWKRLGVEQLRLSTVDMTGIPTLDNLQKGVQFALKYQSL
::. . : : :.:.:.: : ..
XP_016 QELMQQNGIGYVLNASNTCPKPDFIPESHFLRVPVNDSFCEKILPWLDKSVDFIEKAKAS
30 40 50 60 70 80
130 140 150 160 170 180
pF1KE5 GQCVYVHCKAGRSRSATMVAAYLIQVHKWSPEEAVRAIAKIRSYIHIRPGQLDVLKEFHK
. :: ::: :: :::::.. ::... : .:: : . . : : . : : ...:
XP_016 NGCVLVHCLAGISRSATIAIAYIMKRMDMSLDEAYRFVKEKRPTISPNFNFLGQLLDYEK
90 100 110 120 130 140
190 200
pF1KE5 QITARATKDGTFVISKT
.: .. .:
XP_016 KIKNQTGASGPKSKLKLLHLEKPNEPVPAVSEGGQKSETPLSPPCADSATSEAAGQRPVH
150 160 170 180 190 200
>>XP_005253545 (OMIM: 607175) PREDICTED: dual specificit (517 aa)
initn: 119 init1: 119 opt: 158 Z-score: 188.0 bits: 43.0 E(85289): 0.00098
Smith-Waterman score: 158; 34.0% identity (58.0% similar) in 100 aa overlap (95-194:59-158)
70 80 90 100 110 120
pF1KE5 VRGVITMNEEYETRFLCNSSQEWKRLGVEQLRLSTVDMTGIPTLDNLQKGVQFALKYQSL
::. . : : :.:.:.: : ..
XP_005 QELMQQNGIGYVLNASNTCPKPDFIPESHFLRVPVNDSFCEKILPWLDKSVDFIEKAKAS
30 40 50 60 70 80
130 140 150 160 170 180
pF1KE5 GQCVYVHCKAGRSRSATMVAAYLIQVHKWSPEEAVRAIAKIRSYIHIRPGQLDVLKEFHK
. :: ::: :: :::::.. ::... : .:: : . . : : . : : ...:
XP_005 NGCVLVHCLAGISRSATIAIAYIMKRMDMSLDEAYRFVKEKRPTISPNFNFLGQLLDYEK
90 100 110 120 130 140
190 200
pF1KE5 QITARATKDGTFVISKT
.: .. .:
XP_005 KIKNQTGASGPKSKLKLLHLEKPNEPVPAVSEGGQKSETPLSPPCADSATSEAAGQRPVH
150 160 170 180 190 200
>>XP_006719218 (OMIM: 607175) PREDICTED: dual specificit (665 aa)
initn: 147 init1: 119 opt: 158 Z-score: 186.5 bits: 43.1 E(85289): 0.0012
Smith-Waterman score: 160; 29.5% identity (55.1% similar) in 156 aa overlap (40-194:161-306)
10 20 30 40 50 60
pF1KE5 GLARVLFYPTLLYTLFRGKVPGRAHRDWYHRIDPTVLLGALPLRSLTRQLVQDENVRGVI
:: :.. :: :...:.:.... :.
XP_006 CFPGLCEGKSTLVPTCISQPCLPVANIGPTRILPNLYLGC-QRDVLNKELMQQNGIGYVL
140 150 160 170 180
70 80 90 100 110 120
pF1KE5 TM-NEEYETRFLCNSSQEWKRLGVEQLRLSTVDMTGIPTLDNLQKGVQFALKYQSLGQCV
. : . :. .: . ::. . : : :.:.:.: : .. . ::
XP_006 NASNTCPKPDFIPES---------HFLRVPVNDSFCEKILPWLDKSVDFIEKAKASNGCV
190 200 210 220 230 240
130 140 150 160 170 180
pF1KE5 YVHCKAGRSRSATMVAAYLIQVHKWSPEEAVRAIAKIRSYIHIRPGQLDVLKEFHKQITA
::: :: :::::.. ::... : .:: : . . : : . : : ...:.:
XP_006 LVHCLAGISRSATIAIAYIMKRMDMSLDEAYRFVKEKRPTISPNFNFLGQLLDYEKKIKN
250 260 270 280 290 300
190 200
pF1KE5 RATKDGTFVISKT
.. .:
XP_006 QTGASGPKSKLKLLHLEKPNEPVPAVSEGGQKSETPLSPPCADSATSEAAGQRPVHPASV
310 320 330 340 350 360
>>XP_011519159 (OMIM: 607175) PREDICTED: dual specificit (665 aa)
initn: 147 init1: 119 opt: 158 Z-score: 186.5 bits: 43.1 E(85289): 0.0012
Smith-Waterman score: 160; 29.5% identity (55.1% similar) in 156 aa overlap (40-194:161-306)
10 20 30 40 50 60
pF1KE5 GLARVLFYPTLLYTLFRGKVPGRAHRDWYHRIDPTVLLGALPLRSLTRQLVQDENVRGVI
:: :.. :: :...:.:.... :.
XP_011 CFPGLCEGKSTLVPTCISQPCLPVANIGPTRILPNLYLGC-QRDVLNKELMQQNGIGYVL
140 150 160 170 180
70 80 90 100 110 120
pF1KE5 TM-NEEYETRFLCNSSQEWKRLGVEQLRLSTVDMTGIPTLDNLQKGVQFALKYQSLGQCV
. : . :. .: . ::. . : : :.:.:.: : .. . ::
XP_011 NASNTCPKPDFIPES---------HFLRVPVNDSFCEKILPWLDKSVDFIEKAKASNGCV
190 200 210 220 230 240
130 140 150 160 170 180
pF1KE5 YVHCKAGRSRSATMVAAYLIQVHKWSPEEAVRAIAKIRSYIHIRPGQLDVLKEFHKQITA
::: :: :::::.. ::... : .:: : . . : : . : : ...:.:
XP_011 LVHCLAGISRSATIAIAYIMKRMDMSLDEAYRFVKEKRPTISPNFNFLGQLLDYEKKIKN
250 260 270 280 290 300
190 200
pF1KE5 RATKDGTFVISKT
.. .:
XP_011 QTGASGPKSKLKLLHLEKPNEPVPAVSEGGQKSETPLSPPCADSATSEAAGQRPVHPASV
310 320 330 340 350 360
>>XP_011519158 (OMIM: 607175) PREDICTED: dual specificit (665 aa)
initn: 147 init1: 119 opt: 158 Z-score: 186.5 bits: 43.1 E(85289): 0.0012
Smith-Waterman score: 160; 29.5% identity (55.1% similar) in 156 aa overlap (40-194:161-306)
10 20 30 40 50 60
pF1KE5 GLARVLFYPTLLYTLFRGKVPGRAHRDWYHRIDPTVLLGALPLRSLTRQLVQDENVRGVI
:: :.. :: :...:.:.... :.
XP_011 CFPGLCEGKSTLVPTCISQPCLPVANIGPTRILPNLYLGC-QRDVLNKELMQQNGIGYVL
140 150 160 170 180
70 80 90 100 110 120
pF1KE5 TM-NEEYETRFLCNSSQEWKRLGVEQLRLSTVDMTGIPTLDNLQKGVQFALKYQSLGQCV
. : . :. .: . ::. . : : :.:.:.: : .. . ::
XP_011 NASNTCPKPDFIPES---------HFLRVPVNDSFCEKILPWLDKSVDFIEKAKASNGCV
190 200 210 220 230 240
130 140 150 160 170 180
pF1KE5 YVHCKAGRSRSATMVAAYLIQVHKWSPEEAVRAIAKIRSYIHIRPGQLDVLKEFHKQITA
::: :: :::::.. ::... : .:: : . . : : . : : ...:.:
XP_011 LVHCLAGISRSATIAIAYIMKRMDMSLDEAYRFVKEKRPTISPNFNFLGQLLDYEKKIKN
250 260 270 280 290 300
190 200
pF1KE5 RATKDGTFVISKT
.. .:
XP_011 QTGASGPKSKLKLLHLEKPNEPVPAVSEGGQKSETPLSPPCADSATSEAAGQRPVHPASV
310 320 330 340 350 360
>>NP_085143 (OMIM: 607175) dual specificity protein phos (665 aa)
initn: 147 init1: 119 opt: 158 Z-score: 186.5 bits: 43.1 E(85289): 0.0012
Smith-Waterman score: 160; 29.5% identity (55.1% similar) in 156 aa overlap (40-194:161-306)
10 20 30 40 50 60
pF1KE5 GLARVLFYPTLLYTLFRGKVPGRAHRDWYHRIDPTVLLGALPLRSLTRQLVQDENVRGVI
:: :.. :: :...:.:.... :.
NP_085 CFPGLCEGKSTLVPTCISQPCLPVANIGPTRILPNLYLGC-QRDVLNKELMQQNGIGYVL
140 150 160 170 180
70 80 90 100 110 120
pF1KE5 TM-NEEYETRFLCNSSQEWKRLGVEQLRLSTVDMTGIPTLDNLQKGVQFALKYQSLGQCV
. : . :. .: . ::. . : : :.:.:.: : .. . ::
NP_085 NASNTCPKPDFIPES---------HFLRVPVNDSFCEKILPWLDKSVDFIEKAKASNGCV
190 200 210 220 230 240
130 140 150 160 170 180
pF1KE5 YVHCKAGRSRSATMVAAYLIQVHKWSPEEAVRAIAKIRSYIHIRPGQLDVLKEFHKQITA
::: :: :::::.. ::... : .:: : . . : : . : : ...:.:
NP_085 LVHCLAGISRSATIAIAYIMKRMDMSLDEAYRFVKEKRPTISPNFNFLGQLLDYEKKIKN
250 260 270 280 290 300
190 200
pF1KE5 RATKDGTFVISKT
.. .:
NP_085 QTGASGPKSKLKLLHLEKPNEPVPAVSEGGQKSETPLSPPCADSATSEAAGQRPVHPASV
310 320 330 340 350 360
>>NP_064570 (OMIM: 616778) dual specificity protein phos (184 aa)
initn: 131 init1: 117 opt: 143 Z-score: 177.2 bits: 39.5 E(85289): 0.0039
Smith-Waterman score: 143; 29.5% identity (61.1% similar) in 95 aa overlap (91-185:47-141)
70 80 90 100 110 120
pF1KE5 QDENVRGVITMNEEYETRFLCNSSQEWKRLGVEQLRLSTVDMTGIPTLDNLQKGVQFALK
::. : . ..: . .......: .
NP_064 FKDARDAEQLSKNKVTHILSVHDSARPMLEGVKYLCIPAADSPSQNLTRHFKESIKFIHE
20 30 40 50 60 70
130 140 150 160 170 180
pF1KE5 YQSLGQCVYVHCKAGRSRSATMVAAYLIQVHKWSPEEAVRAIAKIRSYIHIRPGQLDVLK
. :. ::: :: :::.:.: ::.. : .. :.:.... :: . : :.
NP_064 CRLRGESCLVHCLAGVSRSVTLVIAYIMTVTDFGWEDALHTVRAGRSCANPNVGFQRQLQ
80 90 100 110 120 130
190 200
pF1KE5 EFHKQITARATKDGTFVISKT
::.:.
NP_064 EFEKHEVHQYRQWLKEEYGESPLQDAEEAKNILAAPGILKFWAFLRRL
140 150 160 170 180
>>NP_001273484 (OMIM: 616778) dual specificity protein p (205 aa)
initn: 117 init1: 117 opt: 143 Z-score: 176.5 bits: 39.6 E(85289): 0.0043
Smith-Waterman score: 143; 29.5% identity (61.1% similar) in 95 aa overlap (91-185:47-141)
70 80 90 100 110 120
pF1KE5 QDENVRGVITMNEEYETRFLCNSSQEWKRLGVEQLRLSTVDMTGIPTLDNLQKGVQFALK
::. : . ..: . .......: .
NP_001 FKDARDAEQLSKNKVTHILSVHDSARPMLEGVKYLCIPAADSPSQNLTRHFKESIKFIHE
20 30 40 50 60 70
130 140 150 160 170 180
pF1KE5 YQSLGQCVYVHCKAGRSRSATMVAAYLIQVHKWSPEEAVRAIAKIRSYIHIRPGQLDVLK
. :. ::: :: :::.:.: ::.. : .. :.:.... :: . : :.
NP_001 CRLRGESCLVHCLAGVSRSVTLVIAYIMTVTDFGWEDALHTVRAGRSCANPNVGFQRQLQ
80 90 100 110 120 130
190 200
pF1KE5 EFHKQITARATKDGTFVISKT
::.:.
NP_001 EFEKHEVHQYRQWLKEEYGESPLQDAEEAKNILGKYKEQGRTEPQPGARRWSSFPALAPL
140 150 160 170 180 190
201 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 22:48:52 2016 done: Mon Nov 7 22:48:53 2016
Total Scan time: 3.810 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]