Result of FASTA (ccds) for
pFN21AE5215
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE5215, 241 aa
1>>>pF1KE5215 241 - 241 aa - 241 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.0294+/-0.000592; mu= 12.2237+/- 0.036
mean_var=82.8784+/-16.160, 0's: 0 Z-trim(113.7): 17 B-trim: 22 in 1/52
Lambda= 0.140881
statistics sampled from 14303 (14320) to 14303 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.783), E-opt: 0.2 (0.44), width: 16
Scan time: 2.060
The best scores are: opt bits E(32554)
CCDS254.1 RCAN3 gene_id:11123|Hs108|chr1 ( 241) 1617 337.3 5.5e-93
CCDS59023.1 RCAN2 gene_id:10231|Hs108|chr6 ( 243) 942 200.1 1.1e-51
CCDS43469.1 RCAN2 gene_id:10231|Hs108|chr6 ( 197) 852 181.8 3e-46
CCDS57979.1 RCAN3 gene_id:11123|Hs108|chr1 ( 231) 825 176.3 1.5e-44
CCDS57980.1 RCAN3 gene_id:11123|Hs108|chr1 ( 173) 819 175.0 2.8e-44
CCDS57981.1 RCAN3 gene_id:11123|Hs108|chr1 ( 183) 812 173.6 7.8e-44
CCDS72730.1 RCAN3 gene_id:11123|Hs108|chr1 ( 116) 793 169.7 7.7e-43
CCDS13637.1 RCAN1 gene_id:1827|Hs108|chr21 ( 252) 774 166.0 2.2e-41
CCDS33551.1 RCAN1 gene_id:1827|Hs108|chr21 ( 197) 758 162.7 1.7e-40
CCDS74788.1 RCAN1 gene_id:1827|Hs108|chr21 ( 277) 728 156.6 1.5e-38
CCDS74790.1 RCAN1 gene_id:1827|Hs108|chr21 ( 171) 716 154.1 5.5e-38
CCDS82668.1 RCAN1 gene_id:1827|Hs108|chr21 ( 205) 570 124.5 5.5e-29
CCDS42921.1 RCAN1 gene_id:1827|Hs108|chr21 ( 117) 505 111.1 3.3e-25
CCDS57982.1 RCAN3 gene_id:11123|Hs108|chr1 ( 115) 450 99.9 7.4e-22
>>CCDS254.1 RCAN3 gene_id:11123|Hs108|chr1 (241 aa)
initn: 1617 init1: 1617 opt: 1617 Z-score: 1782.8 bits: 337.3 E(32554): 5.5e-93
Smith-Waterman score: 1617; 100.0% identity (100.0% similar) in 241 aa overlap (1-241:1-241)
10 20 30 40 50 60
pF1KE5 MLRDTMKSWNDSQSDLCSTDQEEEEEMIFGENEDDLDEMMDLSDLPTSLFACSVHEAVFE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS25 MLRDTMKSWNDSQSDLCSTDQEEEEEMIFGENEDDLDEMMDLSDLPTSLFACSVHEAVFE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 AREQKERFEALFTIYDDQVTFQLFKSFRRVRINFSKPEAAARARIELHETDFNGQKLKLY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS25 AREQKERFEALFTIYDDQVTFQLFKSFRRVRINFSKPEAAARARIELHETDFNGQKLKLY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 FAQVQMSGEVRDKSYLLPPQPVKQFLISPPASPPVGWKQSEDAMPVINYDLLCAVSKLGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS25 FAQVQMSGEVRDKSYLLPPQPVKQFLISPPASPPVGWKQSEDAMPVINYDLLCAVSKLGP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 GEKYELHAGTESTPSVVVHVCESETEEEEETKNPKQKIAQTRRPDPPTAALNEPQTFDCA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS25 GEKYELHAGTESTPSVVVHVCESETEEEEETKNPKQKIAQTRRPDPPTAALNEPQTFDCA
190 200 210 220 230 240
pF1KE5 L
:
CCDS25 L
>>CCDS59023.1 RCAN2 gene_id:10231|Hs108|chr6 (243 aa)
initn: 856 init1: 856 opt: 942 Z-score: 1041.3 bits: 200.1 E(32554): 1.1e-51
Smith-Waterman score: 942; 66.4% identity (83.4% similar) in 217 aa overlap (16-230:28-242)
10 20 30 40
pF1KE5 MLRDTMKSWNDSQSDLCSTDQEEEEEMIFGENEDDLDEMMDLSDLPTS
:: :.. :.: . .. . :..:::.:
CCDS59 MRGESYFIGMRSPGQQGHVPEDGGLFLLCCIDRDWAVTRCFAE--EAFQAITDFNDLPNS
10 20 30 40 50
50 60 70 80 90 100
pF1KE5 LFACSVHEAVFEAREQKERFEALFTIYDDQVTFQLFKSFRRVRINFSKPEAAARARIELH
::::.::..:::..:.::.::.:: ::: :::::::::::::::::.:..:::::::::
CCDS59 LFACNVHQSVFEGEESKEKFEGLFRTYDDCVTFQLFKSFRRVRINFSNPKSAARARIELH
60 70 80 90 100 110
110 120 130 140 150 160
pF1KE5 ETDFNGQKLKLYFAQVQMSGEVRDKSYLLPPQPVKQFLISPPASPPVGWKQSEDAMPVIN
::.: :.:::::::::: :: .: ::::.::::::::.::::::. .:: ::.:
CCDS59 ETQFRGKKLKLYFAQVQTPETDGDKLHLAPPQPAKQFLISPPSSPPVGWQPINDATPVLN
120 130 140 150 160 170
170 180 190 200 210 220
pF1KE5 YDLLCAVSKLGPGEKYELHAGTESTPSVVVHVCESETEEEEETK-NPKQKIAQTRRPD-P
:::: ::.:::::::::::::::::::::::::.:. ::::. : .:: :: ::::: :
CCDS59 YDLLYAVAKLGPGEKYELHAGTESTPSVVVHVCDSDIEEEEDPKTSPKPKIIQTRRPGLP
180 190 200 210 220 230
230 240
pF1KE5 PTAALNEPQTFDCAL
:...
CCDS59 PSVSN
240
>>CCDS43469.1 RCAN2 gene_id:10231|Hs108|chr6 (197 aa)
initn: 784 init1: 784 opt: 852 Z-score: 943.9 bits: 181.8 E(32554): 3e-46
Smith-Waterman score: 852; 70.4% identity (83.3% similar) in 186 aa overlap (47-230:11-196)
20 30 40 50 60 70
pF1KE5 CSTDQEEEEEMIFGENEDDLDEMMDLSDLPTSLFACSVHEAVFEAREQKERFEALFTIYD
..: :: : :: .: ::.::.:: ::
CCDS43 MPAPSMDCDVSTLVACVVDVEVFTNQEVKEKFEGLFRTYD
10 20 30 40
80 90 100 110 120 130
pF1KE5 DQVTFQLFKSFRRVRINFSKPEAAARARIELHETDFNGQKLKLYFAQVQMSGEVRDKSYL
: :::::::::::::::::.:..:::::::::::.: :.:::::::::: :: .:
CCDS43 DCVTFQLFKSFRRVRINFSNPKSAARARIELHETQFRGKKLKLYFAQVQTPETDGDKLHL
50 60 70 80 90 100
140 150 160 170 180 190
pF1KE5 LPPQPVKQFLISPPASPPVGWKQSEDAMPVINYDLLCAVSKLGPGEKYELHAGTESTPSV
::::.::::::::.::::::. .:: ::.::::: ::.::::::::::::::::::::
CCDS43 APPQPAKQFLISPPSSPPVGWQPINDATPVLNYDLLYAVAKLGPGEKYELHAGTESTPSV
110 120 130 140 150 160
200 210 220 230 240
pF1KE5 VVHVCESETEEEEETK-NPKQKIAQTRRPD-PPTAALNEPQTFDCAL
:::::.:. ::::. : .:: :: ::::: ::...
CCDS43 VVHVCDSDIEEEEDPKTSPKPKIIQTRRPGLPPSVSN
170 180 190
>>CCDS57979.1 RCAN3 gene_id:11123|Hs108|chr1 (231 aa)
initn: 822 init1: 822 opt: 825 Z-score: 913.2 bits: 176.3 E(32554): 1.5e-44
Smith-Waterman score: 1523; 95.9% identity (95.9% similar) in 241 aa overlap (1-241:1-231)
10 20 30 40 50 60
pF1KE5 MLRDTMKSWNDSQSDLCSTDQEEEEEMIFGENEDDLDEMMDLSDLPTSLFACSVHEAVFE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS57 MLRDTMKSWNDSQSDLCSTDQEEEEEMIFGENEDDLDEMMDLSDLPTSLFACSVHEAVFE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 AREQKERFEALFTIYDDQVTFQLFKSFRRVRINFSKPEAAARARIELHETDFNGQKLKLY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS57 AREQKERFEALFTIYDDQVTFQLFKSFRRVRINFSKPEAAARARIELHETDFNGQKLKLY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 FAQVQMSGEVRDKSYLLPPQPVKQFLISPPASPPVGWKQSEDAMPVINYDLLCAVSKLGP
::: :::::::::::::::::::::::::::::::::::::::::::::::
CCDS57 FAQ----------SYLLPPQPVKQFLISPPASPPVGWKQSEDAMPVINYDLLCAVSKLGP
130 140 150 160 170
190 200 210 220 230 240
pF1KE5 GEKYELHAGTESTPSVVVHVCESETEEEEETKNPKQKIAQTRRPDPPTAALNEPQTFDCA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS57 GEKYELHAGTESTPSVVVHVCESETEEEEETKNPKQKIAQTRRPDPPTAALNEPQTFDCA
180 190 200 210 220 230
pF1KE5 L
:
CCDS57 L
>>CCDS57980.1 RCAN3 gene_id:11123|Hs108|chr1 (173 aa)
initn: 812 init1: 812 opt: 819 Z-score: 908.5 bits: 175.0 E(32554): 2.8e-44
Smith-Waterman score: 819; 93.3% identity (97.0% similar) in 134 aa overlap (1-134:1-134)
10 20 30 40 50 60
pF1KE5 MLRDTMKSWNDSQSDLCSTDQEEEEEMIFGENEDDLDEMMDLSDLPTSLFACSVHEAVFE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS57 MLRDTMKSWNDSQSDLCSTDQEEEEEMIFGENEDDLDEMMDLSDLPTSLFACSVHEAVFE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 AREQKERFEALFTIYDDQVTFQLFKSFRRVRINFSKPEAAARARIELHETDFNGQKLKLY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS57 AREQKERFEALFTIYDDQVTFQLFKSFRRVRINFSKPEAAARARIELHETDFNGQKLKLY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 FAQVQMSGEVRDKSYLLPPQPVKQFLISPPASPPVGWKQSEDAMPVINYDLLCAVSKLGP
::: . . .:..:
CCDS57 FAQERNMNFTREQSRHPAWWFMSVKVKLKRKKRQKTPNRKLPRRGAPTLRPQR
130 140 150 160 170
>>CCDS57981.1 RCAN3 gene_id:11123|Hs108|chr1 (183 aa)
initn: 807 init1: 807 opt: 812 Z-score: 900.4 bits: 173.6 E(32554): 7.8e-44
Smith-Waterman score: 1116; 75.9% identity (75.9% similar) in 241 aa overlap (1-241:1-183)
10 20 30 40 50 60
pF1KE5 MLRDTMKSWNDSQSDLCSTDQEEEEEMIFGENEDDLDEMMDLSDLPTSLFACSVHEAVFE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS57 MLRDTMKSWNDSQSDLCSTDQEEEEEMIFGENEDDLDEMMDLSDLPTSLFACSVHEAVFE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 AREQKERFEALFTIYDDQVTFQLFKSFRRVRINFSKPEAAARARIELHETDFNGQKLKLY
:::::
CCDS57 AREQK-------------------------------------------------------
130 140 150 160 170 180
pF1KE5 FAQVQMSGEVRDKSYLLPPQPVKQFLISPPASPPVGWKQSEDAMPVINYDLLCAVSKLGP
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS57 ---VQMSGEVRDKSYLLPPQPVKQFLISPPASPPVGWKQSEDAMPVINYDLLCAVSKLGP
70 80 90 100 110 120
190 200 210 220 230 240
pF1KE5 GEKYELHAGTESTPSVVVHVCESETEEEEETKNPKQKIAQTRRPDPPTAALNEPQTFDCA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS57 GEKYELHAGTESTPSVVVHVCESETEEEEETKNPKQKIAQTRRPDPPTAALNEPQTFDCA
130 140 150 160 170 180
pF1KE5 L
:
CCDS57 L
>>CCDS72730.1 RCAN3 gene_id:11123|Hs108|chr1 (116 aa)
initn: 793 init1: 793 opt: 793 Z-score: 882.6 bits: 169.7 E(32554): 7.7e-43
Smith-Waterman score: 793; 100.0% identity (100.0% similar) in 116 aa overlap (126-241:1-116)
100 110 120 130 140 150
pF1KE5 KPEAAARARIELHETDFNGQKLKLYFAQVQMSGEVRDKSYLLPPQPVKQFLISPPASPPV
::::::::::::::::::::::::::::::
CCDS72 MSGEVRDKSYLLPPQPVKQFLISPPASPPV
10 20 30
160 170 180 190 200 210
pF1KE5 GWKQSEDAMPVINYDLLCAVSKLGPGEKYELHAGTESTPSVVVHVCESETEEEEETKNPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 GWKQSEDAMPVINYDLLCAVSKLGPGEKYELHAGTESTPSVVVHVCESETEEEEETKNPK
40 50 60 70 80 90
220 230 240
pF1KE5 QKIAQTRRPDPPTAALNEPQTFDCAL
::::::::::::::::::::::::::
CCDS72 QKIAQTRRPDPPTAALNEPQTFDCAL
100 110
>>CCDS13637.1 RCAN1 gene_id:1827|Hs108|chr21 (252 aa)
initn: 816 init1: 428 opt: 774 Z-score: 856.6 bits: 166.0 E(32554): 2.2e-41
Smith-Waterman score: 774; 61.7% identity (78.8% similar) in 193 aa overlap (38-225:57-245)
10 20 30 40 50 60
pF1KE5 SWNDSQSDLCSTDQEEEEEMIFGENEDDLDEMMDLSDLPTSLFACSVHEAVFEAREQKER
: .::.:::.. .:: . :: . .
CCDS13 GVTLRPFAPLSGAAEADEGGGDWSFIDCEMEEVDLQDLPSATIACHLDPRVFVDGLCRAK
30 40 50 60 70 80
70 80 90 100 110 120
pF1KE5 FEALFTIYDDQVTFQLFKSFRRVRINFSKPEAAARARIELHETDFNGQKLKLYFAQVQMS
::.:: :: ..::: ::::.:::::::.: .:: ::..::.:.: :...::::::.
CCDS13 FESLFRTYDKDITFQYFKSFKRVRINFSNPFSAADARLQLHKTEFLGKEMKLYFAQTLHI
90 100 110 120 130 140
130 140 150 160 170 180
pF1KE5 GEVRDKSYLLPPQPVKQFLISPPASPPVGWKQSEDAMPVINYDLLCAVSKLGPGEKYELH
: .:.: ::.: ::::::::::::::::: ::: :::::::: :.::::::::::::
CCDS13 G----SSHLAPPNPDKQFLISPPASPPVGWKQVEDATPVINYDLLYAISKLGPGEKYELH
150 160 170 180 190 200
190 200 210 220 230 240
pF1KE5 AGTESTPSVVVHVCESETEEEEET-----KNPKQKIAQTRRPDPPTAALNEPQTFDCAL
:.:..:::::::::::. :.::: . :: :: :::::.
CCDS13 AATDTTPSVVVHVCESDQEKEEEEEMERMRRPKPKIIQTRRPEYTPIHLS
210 220 230 240 250
>>CCDS33551.1 RCAN1 gene_id:1827|Hs108|chr21 (197 aa)
initn: 800 init1: 428 opt: 758 Z-score: 840.6 bits: 162.7 E(32554): 1.7e-40
Smith-Waterman score: 758; 62.5% identity (79.9% similar) in 184 aa overlap (47-225:11-190)
20 30 40 50 60 70
pF1KE5 CSTDQEEEEEMIFGENEDDLDEMMDLSDLPTSLFACSVHEAVFEAREQKERFEALFTIYD
.::.:: .. .: : . .::.:: ::
CCDS33 MHFRNFNYSFSSLIACVANSDIFSESETRAKFESLFRTYD
10 20 30 40
80 90 100 110 120 130
pF1KE5 DQVTFQLFKSFRRVRINFSKPEAAARARIELHETDFNGQKLKLYFAQVQMSGEVRDKSYL
..::: ::::.:::::::.: .:: ::..::.:.: :...::::::. : .:.:
CCDS33 KDITFQYFKSFKRVRINFSNPFSAADARLQLHKTEFLGKEMKLYFAQTLHIG----SSHL
50 60 70 80 90
140 150 160 170 180 190
pF1KE5 LPPQPVKQFLISPPASPPVGWKQSEDAMPVINYDLLCAVSKLGPGEKYELHAGTESTPSV
::.: ::::::::::::::::: ::: :::::::: :.:::::::::::::.:..::::
CCDS33 APPNPDKQFLISPPASPPVGWKQVEDATPVINYDLLYAISKLGPGEKYELHAATDTTPSV
100 110 120 130 140 150
200 210 220 230 240
pF1KE5 VVHVCESETEEEEET-----KNPKQKIAQTRRPDPPTAALNEPQTFDCAL
:::::::. :.::: . :: :: :::::.
CCDS33 VVHVCESDQEKEEEEEMERMRRPKPKIIQTRRPEYTPIHLS
160 170 180 190
>>CCDS74788.1 RCAN1 gene_id:1827|Hs108|chr21 (277 aa)
initn: 767 init1: 428 opt: 728 Z-score: 805.4 bits: 156.6 E(32554): 1.5e-38
Smith-Waterman score: 729; 61.7% identity (77.7% similar) in 188 aa overlap (43-225:94-270)
20 30 40 50 60 70
pF1KE5 QSDLCSTDQEEEEEMIFGENEDDLDEMMDLSDLPTSLFACSVHEAVFEAREQKERFEALF
:.:: . :. : : .: .::.::
CCDS74 QPHVEQASTSASPRLLAVNIPEDTLLSYPESSLPLQRH-CAFH------RFSKAKFESLF
70 80 90 100 110
80 90 100 110 120 130
pF1KE5 TIYDDQVTFQLFKSFRRVRINFSKPEAAARARIELHETDFNGQKLKLYFAQVQMSGEVRD
:: ..::: ::::.:::::::.: .:: ::..::.:.: :...::::::. :
CCDS74 RTYDKDITFQYFKSFKRVRINFSNPFSAADARLQLHKTEFLGKEMKLYFAQTLHIG----
120 130 140 150 160 170
140 150 160 170 180 190
pF1KE5 KSYLLPPQPVKQFLISPPASPPVGWKQSEDAMPVINYDLLCAVSKLGPGEKYELHAGTES
.:.: ::.: ::::::::::::::::: ::: :::::::: :.:::::::::::::.:..
CCDS74 SSHLAPPNPDKQFLISPPASPPVGWKQVEDATPVINYDLLYAISKLGPGEKYELHAATDT
180 190 200 210 220 230
200 210 220 230 240
pF1KE5 TPSVVVHVCESETEEEEET-----KNPKQKIAQTRRPDPPTAALNEPQTFDCAL
:::::::::::. :.::: . :: :: :::::.
CCDS74 TPSVVVHVCESDQEKEEEEEMERMRRPKPKIIQTRRPEYTPIHLS
240 250 260 270
241 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 22:34:55 2016 done: Mon Nov 7 22:34:55 2016
Total Scan time: 2.060 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]