FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5201, 218 aa 1>>>pF1KE5201 218 - 218 aa - 218 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.3583+/-0.000414; mu= 13.4030+/- 0.026 mean_var=65.3421+/-13.282, 0's: 0 Z-trim(110.5): 21 B-trim: 0 in 0/51 Lambda= 0.158664 statistics sampled from 18870 (18885) to 18870 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.603), E-opt: 0.2 (0.221), width: 16 Scan time: 5.810 The best scores are: opt bits E(85289) NP_000185 (OMIM: 300322,300323,308000) hypoxanthin ( 218) 1448 340.3 1.4e-93 NP_064585 (OMIM: 610751) phosphoribosyltransferase ( 225) 1009 239.8 2.6e-63 NP_001269715 (OMIM: 610751) phosphoribosyltransfer ( 190) 781 187.6 1.2e-47 >>NP_000185 (OMIM: 300322,300323,308000) hypoxanthine-gu (218 aa) initn: 1448 init1: 1448 opt: 1448 Z-score: 1800.8 bits: 340.3 E(85289): 1.4e-93 Smith-Waterman score: 1448; 100.0% identity (100.0% similar) in 218 aa overlap (1-218:1-218) 10 20 30 40 50 60 pF1KE5 MATRSPGVVISDDEPGYDLDLFCIPNHYAEDLERVFIPHGLIMDRTERLARDVMKEMGGH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 MATRSPGVVISDDEPGYDLDLFCIPNHYAEDLERVFIPHGLIMDRTERLARDVMKEMGGH 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 HIVALCVLKGGYKFFADLLDYIKALNRNSDRSIPMTVDFIRLKSYCNDQSTGDIKVIGGD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 HIVALCVLKGGYKFFADLLDYIKALNRNSDRSIPMTVDFIRLKSYCNDQSTGDIKVIGGD 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 DLSTLTGKNVLIVEDIIDTGKTMQTLLSLVRQYNPKMVKVASLLVKRTPRSVGYKPDFVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 DLSTLTGKNVLIVEDIIDTGKTMQTLLSLVRQYNPKMVKVASLLVKRTPRSVGYKPDFVG 130 140 150 160 170 180 190 200 210 pF1KE5 FEIPDKFVVGYALDYNEYFRDLNHVCVISETGKAKYKA :::::::::::::::::::::::::::::::::::::: NP_000 FEIPDKFVVGYALDYNEYFRDLNHVCVISETGKAKYKA 190 200 210 >>NP_064585 (OMIM: 610751) phosphoribosyltransferase dom (225 aa) initn: 1025 init1: 1009 opt: 1009 Z-score: 1257.5 bits: 239.8 E(85289): 2.6e-63 Smith-Waterman score: 1009; 68.2% identity (88.2% similar) in 211 aa overlap (7-217:14-224) 10 20 30 40 50 pF1KE5 MATRSPGVVISDDEPGYDLDLFCIPNHYAEDLERVFIPHGLIMDRTERLARDV :::: :: :::::.:: :.:: ::: :.::::.:.:: ::::.:. NP_064 MAGSSEEAPDYGRGVVIMDDWPGYDLNLFTYPQHYYGDLEYVLIPHGIIVDRIERLAKDI 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE5 MKEMGGHHIVALCVLKGGYKFFADLLDYIKALNRNSDRSIPMTVDFIRLKSYCNDQSTGD ::..: :..:::::::::: :::....: ..::::: . : ::::::::: :::: :. NP_064 MKDIGYSDIMVLCVLKGGYKFCADLVEHLKNISRNSDRFVSMKVDFIRLKSYRNDQSMGE 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE5 IKVIGGDDLSTLTGKNVLIVEDIIDTGKTMQTLLSLVRQYNPKMVKVASLLVKRTPRSVG ...:::::::::.:::::::::.. ::.::..::: ...:.:.:.:::::::::: :: : NP_064 MQIIGGDDLSTLAGKNVLIVEDVVGTGRTMKALLSNIEKYKPNMIKVASLLVKRTSRSDG 130 140 150 160 170 180 180 190 200 210 pF1KE5 YKPDFVGFEIPDKFVVGYALDYNEYFRDLNHVCVISETGKAKYKA ..::..:::::. ::::::::::::::::::.:::.: :: ::. NP_064 FRPDYAGFEIPNLFVVGYALDYNEYFRDLNHICVINEHGKEKYRV 190 200 210 220 >>NP_001269715 (OMIM: 610751) phosphoribosyltransferase (190 aa) initn: 781 init1: 781 opt: 781 Z-score: 976.6 bits: 187.6 E(85289): 1.2e-47 Smith-Waterman score: 781; 66.1% identity (87.1% similar) in 171 aa overlap (7-177:14-184) 10 20 30 40 50 pF1KE5 MATRSPGVVISDDEPGYDLDLFCIPNHYAEDLERVFIPHGLIMDRTERLARDV :::: :: :::::.:: :.:: ::: :.::::.:.:: ::::.:. NP_001 MAGSSEEAPDYGRGVVIMDDWPGYDLNLFTYPQHYYGDLEYVLIPHGIIVDRIERLAKDI 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE5 MKEMGGHHIVALCVLKGGYKFFADLLDYIKALNRNSDRSIPMTVDFIRLKSYCNDQSTGD ::..: :..:::::::::: :::....: ..::::: . : ::::::::: :::: :. NP_001 MKDIGYSDIMVLCVLKGGYKFCADLVEHLKNISRNSDRFVSMKVDFIRLKSYRNDQSMGE 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE5 IKVIGGDDLSTLTGKNVLIVEDIIDTGKTMQTLLSLVRQYNPKMVKVASLLVKRTPRSVG ...:::::::::.:::::::::.. ::.::..::: ...:.:.:.:::::::::: :: : NP_001 MQIIGGDDLSTLAGKNVLIVEDVVGTGRTMKALLSNIEKYKPNMIKVASLLVKRTSRSDG 130 140 150 160 170 180 180 190 200 210 pF1KE5 YKPDFVGFEIPDKFVVGYALDYNEYFRDLNHVCVISETGKAKYKA ..:: NP_001 FRPDSHMRHQ 190 218 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 22:27:48 2016 done: Mon Nov 7 22:27:49 2016 Total Scan time: 5.810 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]