Result of FASTA (ccds) for
pFN21AE5167
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE5167, 156 aa
1>>>pF1KE5167 156 - 156 aa - 156 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.8582+/-0.000695; mu= 15.2508+/- 0.042
mean_var=68.6742+/-13.457, 0's: 0 Z-trim(110.3): 19 B-trim: 6 in 1/49
Lambda= 0.154767
statistics sampled from 11466 (11483) to 11466 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.732), E-opt: 0.2 (0.353), width: 16
Scan time: 1.610
The best scores are: opt bits E(32554)
CCDS9559.1 RNASE1 gene_id:6035|Hs108|chr14 ( 156) 1069 246.7 4.3e-66
CCDS9555.1 RNASE4 gene_id:6038|Hs108|chr14 ( 147) 493 118.1 2.1e-27
CCDS41914.1 RNASE7 gene_id:84659|Hs108|chr14 ( 156) 317 78.8 1.5e-15
CCDS9554.1 ANG gene_id:283|Hs108|chr14 ( 147) 311 77.4 3.6e-15
CCDS9558.1 RNASE6 gene_id:6039|Hs108|chr14 ( 150) 297 74.3 3.2e-14
CCDS9567.1 RNASE8 gene_id:122665|Hs108|chr14 ( 154) 294 73.7 5.2e-14
CCDS32037.1 RNASE12 gene_id:493901|Hs108|chr14 ( 147) 256 65.2 1.8e-11
>>CCDS9559.1 RNASE1 gene_id:6035|Hs108|chr14 (156 aa)
initn: 1069 init1: 1069 opt: 1069 Z-score: 1300.1 bits: 246.7 E(32554): 4.3e-66
Smith-Waterman score: 1069; 100.0% identity (100.0% similar) in 156 aa overlap (1-156:1-156)
10 20 30 40 50 60
pF1KE5 MALEKSLVRLLLLVLILLVLGWVQPSLGKESRAKKFQRQHMDSDSSPSSSSTYCNQMMRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS95 MALEKSLVRLLLLVLILLVLGWVQPSLGKESRAKKFQRQHMDSDSSPSSSSTYCNQMMRR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 RNMTQGRCKPVNTFVHEPLVDVQNVCFQEKVTCKNGQGNCYKSNSSMHITDCRLTNGSRY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS95 RNMTQGRCKPVNTFVHEPLVDVQNVCFQEKVTCKNGQGNCYKSNSSMHITDCRLTNGSRY
70 80 90 100 110 120
130 140 150
pF1KE5 PNCAYRTSPKERHIIVACEGSPYVPVHFDASVEDST
::::::::::::::::::::::::::::::::::::
CCDS95 PNCAYRTSPKERHIIVACEGSPYVPVHFDASVEDST
130 140 150
>>CCDS9555.1 RNASE4 gene_id:6038|Hs108|chr14 (147 aa)
initn: 535 init1: 198 opt: 493 Z-score: 605.4 bits: 118.1 E(32554): 2.1e-27
Smith-Waterman score: 493; 46.3% identity (75.2% similar) in 149 aa overlap (1-149:1-146)
10 20 30 40 50 60
pF1KE5 MALEKSLVRLLLLVLILLVLGWVQPSLGKESRAKKFQRQHMDSDSSPSSSSTYCNQMMRR
:::... ::::.: :: :: :::: :... ..: :::. . . ..:. ::: ::.:
CCDS95 MALQRTHSLLLLLLLTLLGLGLVQPSYGQDGMYQRFLRQHVHPEET-GGSDRYCNLMMQR
10 20 30 40 50
70 80 90 100 110 120
pF1KE5 RNMTQGRCKPVNTFVHEPLVDVQNVCFQEKVTCKNGQGNCYKSNSSMHITDCRLTNGSRY
:.:: .:: :::.:: . .....: .. ::::. ::... ...:::: :..::
CCDS95 RKMTLYHCKRFNTFIHEDIWNIRSICSTTNIQCKNGKMNCHEG--VVKVTDCRDTGSSRA
60 70 80 90 100 110
130 140 150
pF1KE5 PNCAYRTSPKERHIIVACEGSPYVPVHFDASVEDST
::: ::. . :....::::.: ::::::
CCDS95 PNCRYRAIASTRRVVIACEGNPQVPVHFDG
120 130 140
>>CCDS41914.1 RNASE7 gene_id:84659|Hs108|chr14 (156 aa)
initn: 339 init1: 219 opt: 317 Z-score: 392.6 bits: 78.8 E(32554): 1.5e-15
Smith-Waterman score: 317; 36.7% identity (63.3% similar) in 150 aa overlap (14-149:11-153)
10 20 30 40 50
pF1KE5 MALEKSLVRLLLLVLILLVLG-WVQ--PSLGKE---SRAKKFQRQHMDSDSSPSSSSTYC
.:.::.:: :: : .: . .. :. :::. :: .. :
CCDS41 MAPARAGFCPLLLLLLLGLWVAEIPVSAKPKGMTSSQWFKIQHMQ----PSPQA--C
10 20 30 40 50
60 70 80 90 100 110
pF1KE5 NQMMRRRNMTQGRCKPVNTFVHEPLVDVQNVCFQEKVTCKNGQGNCYKSNSSMHITDCRL
:. :. : ::: .:::.:::. .: .: :..::::. ::..:.... .: :.:
CCDS41 NSAMKNINKHTKRCKDLNTFLHEPFSSVAATCQTPKIACKNGDKNCHQSHGAVSLTMCKL
60 70 80 90 100 110
120 130 140 150
pF1KE5 TNGSRYPNCAYRTSPKERHIIVACEGSP--------YVPVHFDASVEDST
:.: ..::: :. . ... .:::. ::::.:
CCDS41 TSG-KHPNCRYKEKRQNKSYVVACKPPQKKDSQQFHLVPVHLDRVL
120 130 140 150
>>CCDS9554.1 ANG gene_id:283|Hs108|chr14 (147 aa)
initn: 259 init1: 131 opt: 311 Z-score: 385.8 bits: 77.4 E(32554): 3.6e-15
Smith-Waterman score: 311; 36.3% identity (69.2% similar) in 146 aa overlap (11-152:7-143)
10 20 30 40 50
pF1KE5 MALEKSLVRLLLLVLILLVLGWVQPSLGKE-SRAKKFQRQHMDSDSSPSSSSTYCNQMMR
.::....: :: . :.:... :: .: ::.:. . . .. ::...::
CCDS95 MVMGLGVLLLVFVLGLGLTPPTLAQDNSRYTHFLTQHYDA-KPQGRDDRYCESIMR
10 20 30 40 50
60 70 80 90 100 110
pF1KE5 RRNMTQGRCKPVNTFVHEPLVDVQNVCFQEKVTCKNGQG---NCYKSNSSMHITDCRLTN
::..:. :: .:::.: ... .: . :::. : :.::...: :.: .
CCDS95 RRGLTSP-CKDINTFIHGNKRSIKAICEN-----KNGNPHRENLRISKSSFQVTTCKLHG
60 70 80 90 100
120 130 140 150
pF1KE5 GSRYPNCAYRTSPKERHIIVACEGSPYVPVHFDASVEDST
:: .: : ::.. :...::::.. .:::.: :.
CCDS95 GSPWPPCQYRATAGFRNVVVACENG--LPVHLDQSIFRRP
110 120 130 140
>>CCDS9558.1 RNASE6 gene_id:6039|Hs108|chr14 (150 aa)
initn: 324 init1: 187 opt: 297 Z-score: 368.7 bits: 74.3 E(32554): 3.2e-14
Smith-Waterman score: 297; 36.2% identity (63.1% similar) in 149 aa overlap (12-150:7-148)
10 20 30 40 50
pF1KE5 MALEKSLVRLLLLVLILLVLGWVQPSLG---KESRAKKFQRQHMDSDSSPSSSSTYCNQM
::.:.:.. : : : . . ..:. :. ::. .:: ::.
CCDS95 MVLCFPLLLLLLVLWGPVCPLHAWPKRLTKAHWFEIQHI----QPSP--LQCNRA
10 20 30 40
60 70 80 90 100 110
pF1KE5 MRRRNMTQGRCKPVNTFVHEPLVDVQNVCFQEKVTCKNGQGNCYKSNSSMHITDCRLTNG
: : .:: :::.:. . .: :: ...::: . ::..:.. ...::::::.:
CCDS95 MSGINNYTQHCKHQNTFLHDSFQNVAAVCDLLSIVCKNRRHNCHQSSKPVNMTDCRLTSG
50 60 70 80 90 100
120 130 140 150
pF1KE5 SRYPNCAYRTSPKERHIIVACE-----GSPY--VPVHFDASVEDST
.::.: : .. . . .::::. :: ::::.:.
CCDS95 -KYPQCRYSAAAQYKFFIVACDPPQKSDPPYKLVPVHLDSIL
110 120 130 140 150
>>CCDS9567.1 RNASE8 gene_id:122665|Hs108|chr14 (154 aa)
initn: 311 init1: 179 opt: 294 Z-score: 365.0 bits: 73.7 E(32554): 5.2e-14
Smith-Waterman score: 294; 37.1% identity (59.6% similar) in 151 aa overlap (15-152:11-154)
10 20 30 40 50
pF1KE5 MALEKSLVRLLLLVLILLVLG-WVQPSLGKE-----SRAKKFQRQHMDSDSSPSSSSTYC
:.::.:: :: : . . .. :. ::.. :: .. :
CCDS95 MAPARAGCCPLLLLLLGLWVAEVLVRAKPKDMTSSQWFKTQHVQ----PSPQA--C
10 20 30 40 50
60 70 80 90 100 110
pF1KE5 NQMMRRRNMTQGRCKPVNTFVHEPLVDVQNVCFQEKVTCKNGQGNCYKSNSSMHITDCRL
:. : : ::: .:::.:::. .: .: ...:::. ::..:.. : .: .:
CCDS95 NSAMSIINKYTERCKDLNTFLHEPFSSVAITCQTPNIACKNSCKNCHQSHGPMSLTMGEL
60 70 80 90 100 110
120 130 140 150
pF1KE5 TNGSRYPNCAYRTSPKERHIIVACE-------GSPYVPVHFDASVEDST
:.: .:::: :. . . ::::. : : ::::.: :
CCDS95 TSG-KYPNCRYKEKHLNTPYIVACDPPQQGDPGYPLVPVHLDKVV
120 130 140 150
>>CCDS32037.1 RNASE12 gene_id:493901|Hs108|chr14 (147 aa)
initn: 158 init1: 83 opt: 256 Z-score: 319.4 bits: 65.2 E(32554): 1.8e-11
Smith-Waterman score: 256; 29.4% identity (69.9% similar) in 136 aa overlap (10-139:1-135)
10 20 30 40 50
pF1KE5 MALEKSLVRLLLLVLILLVLGWVQPSLGKESRAKKFQRQHMD--SDSSPSSSSTYCNQMM
....:.:.::: . . .. :. . ... :.: ... : . :::.:.
CCDS32 MIIMVIIFLVLLFWENEVNDEAVMSTLEHLHVDYPQNDVPVPAR-YCNHMI
10 20 30 40 50
60 70 80 90 100 110
pF1KE5 RRRNMTQG--RCKPVNTFVHEPLVDVQNVCFQ-EKVTCKNGQGN-CYKSNSSMHITDCRL
.: . . :: ..:.:: ....:.. .::.:.: .. :..:......: :.:
CCDS32 IQRVIREPDHTCKKEHVFIHERPRKINGICISPKKVACQNLSAIFCFQSETKFKMTVCQL
60 70 80 90 100 110
120 130 140 150
pF1KE5 TNGSRYPNCAYRTSPKERHIIVACEGSPYVPVHFDASVEDST
.:.::: : :. :: : ..:.:.
CCDS32 IEGTRYPACRYHYSPTEGFVLVTCDDLRPDSFLGYVK
120 130 140
156 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 22:13:50 2016 done: Mon Nov 7 22:13:51 2016
Total Scan time: 1.610 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]