Result of FASTA (omim) for
pFN21AE5148
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE5148, 64 aa
1>>>pF1KE5148 64 - 64 aa - 64 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.2853+/-0.000243; mu= 10.7845+/- 0.015
mean_var=41.6980+/- 8.482, 0's: 0 Z-trim(121.7): 32 B-trim: 1394 in 1/53
Lambda= 0.198617
statistics sampled from 38574 (38607) to 38574 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.836), E-opt: 0.2 (0.453), width: 16
Scan time: 3.410
The best scores are: opt bits E(85289)
NP_067614 (OMIM: 154020,601814) sodium/potassium-t ( 64) 449 134.4 1.2e-32
NP_001671 (OMIM: 154020,601814) sodium/potassium-t ( 66) 399 120.1 2.5e-28
NP_001265646 (OMIM: 602359) phospholemman precurso ( 92) 194 61.4 1.6e-10
NP_005022 (OMIM: 602359) phospholemman precursor [ ( 92) 194 61.4 1.6e-10
NP_068702 (OMIM: 602359) phospholemman precursor [ ( 92) 194 61.4 1.6e-10
XP_016882363 (OMIM: 602359) PREDICTED: phospholemm ( 92) 194 61.4 1.6e-10
NP_001265647 (OMIM: 602359) phospholemman precurso ( 92) 194 61.4 1.6e-10
XP_016882364 (OMIM: 602359) PREDICTED: phospholemm ( 110) 194 61.5 1.9e-10
XP_016882365 (OMIM: 602359) PREDICTED: phospholemm ( 110) 194 61.5 1.9e-10
NP_071286 (OMIM: 606683) FXYD domain-containing io ( 95) 188 59.7 5.4e-10
NP_001158304 (OMIM: 606683) FXYD domain-containing ( 95) 188 59.7 5.4e-10
NP_001158308 (OMIM: 606683) FXYD domain-containing ( 95) 188 59.7 5.4e-10
NP_001158309 (OMIM: 606683) FXYD domain-containing ( 95) 188 59.7 5.4e-10
NP_001158303 (OMIM: 606683) FXYD domain-containing ( 95) 188 59.7 5.4e-10
NP_071289 (OMIM: 606684) FXYD domain-containing io ( 80) 140 45.9 6.5e-06
NP_005962 (OMIM: 604996) FXYD domain-containing io ( 87) 132 43.7 3.4e-05
XP_016882366 (OMIM: 604996) PREDICTED: FXYD domain ( 87) 132 43.7 3.4e-05
NP_001129483 (OMIM: 604996) FXYD domain-containing ( 87) 132 43.7 3.4e-05
XP_016882367 (OMIM: 604996) PREDICTED: FXYD domain ( 87) 132 43.7 3.4e-05
NP_001129479 (OMIM: 604996) FXYD domain-containing ( 144) 132 43.8 5.2e-05
NP_001171892 (OMIM: 616926) FXYD domain-containing ( 89) 120 40.2 0.00038
NP_775183 (OMIM: 616926) FXYD domain-containing io ( 89) 120 40.2 0.00038
NP_001307842 (OMIM: 606669) FXYD domain-containing ( 147) 118 39.8 0.00086
NP_001129480 (OMIM: 604996) FXYD domain-containing ( 96) 116 39.1 0.00089
NP_659003 (OMIM: 606669) FXYD domain-containing io ( 178) 118 39.8 0.001
NP_054883 (OMIM: 606669) FXYD domain-containing io ( 178) 118 39.8 0.001
NP_001158077 (OMIM: 606669) FXYD domain-containing ( 178) 118 39.8 0.001
XP_005259053 (OMIM: 604996) PREDICTED: FXYD domain ( 113) 116 39.1 0.001
NP_001129484 (OMIM: 604996) FXYD domain-containing ( 113) 116 39.1 0.001
NP_068710 (OMIM: 604996) FXYD domain-containing io ( 113) 116 39.1 0.001
XP_011525334 (OMIM: 604996) PREDICTED: FXYD domain ( 170) 116 39.2 0.0014
NP_001307841 (OMIM: 606669) FXYD domain-containing ( 194) 113 38.4 0.0029
>>NP_067614 (OMIM: 154020,601814) sodium/potassium-trans (64 aa)
initn: 449 init1: 449 opt: 449 Z-score: 707.2 bits: 134.4 E(85289): 1.2e-32
Smith-Waterman score: 449; 100.0% identity (100.0% similar) in 64 aa overlap (1-64:1-64)
10 20 30 40 50 60
pF1KE5 MDRWYLGGSPKGDVDPFYYDYETVRNGGLIFAGLAFIVGLLILLSRRFRCGGNKKRRQIN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_067 MDRWYLGGSPKGDVDPFYYDYETVRNGGLIFAGLAFIVGLLILLSRRFRCGGNKKRRQIN
10 20 30 40 50 60
pF1KE5 EDEP
::::
NP_067 EDEP
>>NP_001671 (OMIM: 154020,601814) sodium/potassium-trans (66 aa)
initn: 399 init1: 399 opt: 399 Z-score: 629.6 bits: 120.1 E(85289): 2.5e-28
Smith-Waterman score: 399; 100.0% identity (100.0% similar) in 58 aa overlap (7-64:9-66)
10 20 30 40 50
pF1KE5 MDRWYLGGSPKGDVDPFYYDYETVRNGGLIFAGLAFIVGLLILLSRRFRCGGNKKRRQ
::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MTGLSMDGGGSPKGDVDPFYYDYETVRNGGLIFAGLAFIVGLLILLSRRFRCGGNKKRRQ
10 20 30 40 50 60
60
pF1KE5 INEDEP
::::::
NP_001 INEDEP
>>NP_001265646 (OMIM: 602359) phospholemman precursor [H (92 aa)
initn: 187 init1: 187 opt: 194 Z-score: 309.9 bits: 61.4 E(85289): 1.6e-10
Smith-Waterman score: 194; 52.7% identity (80.0% similar) in 55 aa overlap (9-63:22-75)
10 20 30 40
pF1KE5 MDRWYLGGSPKGDVDPFYYDYETVRNGGLIFAGLAFIVGLLILLSRR
::: . ::: :::.... :::..::. ::.:.::.::::
NP_001 MASLGHILVFCVGLLTMAKAESPK-EHDPFTYDYQSLQIGGLVIAGILFILGILIVLSRR
10 20 30 40 50
50 60
pF1KE5 FRCGGNKKRRQINEDEP
:: :...: . ::
NP_001 CRCKFNQQQRTGEPDEEEGTFRSSIRRLSTRRR
60 70 80 90
>>NP_005022 (OMIM: 602359) phospholemman precursor [Homo (92 aa)
initn: 187 init1: 187 opt: 194 Z-score: 309.9 bits: 61.4 E(85289): 1.6e-10
Smith-Waterman score: 194; 52.7% identity (80.0% similar) in 55 aa overlap (9-63:22-75)
10 20 30 40
pF1KE5 MDRWYLGGSPKGDVDPFYYDYETVRNGGLIFAGLAFIVGLLILLSRR
::: . ::: :::.... :::..::. ::.:.::.::::
NP_005 MASLGHILVFCVGLLTMAKAESPK-EHDPFTYDYQSLQIGGLVIAGILFILGILIVLSRR
10 20 30 40 50
50 60
pF1KE5 FRCGGNKKRRQINEDEP
:: :...: . ::
NP_005 CRCKFNQQQRTGEPDEEEGTFRSSIRRLSTRRR
60 70 80 90
>>NP_068702 (OMIM: 602359) phospholemman precursor [Homo (92 aa)
initn: 187 init1: 187 opt: 194 Z-score: 309.9 bits: 61.4 E(85289): 1.6e-10
Smith-Waterman score: 194; 52.7% identity (80.0% similar) in 55 aa overlap (9-63:22-75)
10 20 30 40
pF1KE5 MDRWYLGGSPKGDVDPFYYDYETVRNGGLIFAGLAFIVGLLILLSRR
::: . ::: :::.... :::..::. ::.:.::.::::
NP_068 MASLGHILVFCVGLLTMAKAESPK-EHDPFTYDYQSLQIGGLVIAGILFILGILIVLSRR
10 20 30 40 50
50 60
pF1KE5 FRCGGNKKRRQINEDEP
:: :...: . ::
NP_068 CRCKFNQQQRTGEPDEEEGTFRSSIRRLSTRRR
60 70 80 90
>>XP_016882363 (OMIM: 602359) PREDICTED: phospholemman i (92 aa)
initn: 187 init1: 187 opt: 194 Z-score: 309.9 bits: 61.4 E(85289): 1.6e-10
Smith-Waterman score: 194; 52.7% identity (80.0% similar) in 55 aa overlap (9-63:22-75)
10 20 30 40
pF1KE5 MDRWYLGGSPKGDVDPFYYDYETVRNGGLIFAGLAFIVGLLILLSRR
::: . ::: :::.... :::..::. ::.:.::.::::
XP_016 MASLGHILVFCVGLLTMAKAESPK-EHDPFTYDYQSLQIGGLVIAGILFILGILIVLSRR
10 20 30 40 50
50 60
pF1KE5 FRCGGNKKRRQINEDEP
:: :...: . ::
XP_016 CRCKFNQQQRTGEPDEEEGTFRSSIRRLSTRRR
60 70 80 90
>>NP_001265647 (OMIM: 602359) phospholemman precursor [H (92 aa)
initn: 187 init1: 187 opt: 194 Z-score: 309.9 bits: 61.4 E(85289): 1.6e-10
Smith-Waterman score: 194; 52.7% identity (80.0% similar) in 55 aa overlap (9-63:22-75)
10 20 30 40
pF1KE5 MDRWYLGGSPKGDVDPFYYDYETVRNGGLIFAGLAFIVGLLILLSRR
::: . ::: :::.... :::..::. ::.:.::.::::
NP_001 MASLGHILVFCVGLLTMAKAESPK-EHDPFTYDYQSLQIGGLVIAGILFILGILIVLSRR
10 20 30 40 50
50 60
pF1KE5 FRCGGNKKRRQINEDEP
:: :...: . ::
NP_001 CRCKFNQQQRTGEPDEEEGTFRSSIRRLSTRRR
60 70 80 90
>>XP_016882364 (OMIM: 602359) PREDICTED: phospholemman i (110 aa)
initn: 187 init1: 187 opt: 194 Z-score: 308.7 bits: 61.5 E(85289): 1.9e-10
Smith-Waterman score: 194; 52.7% identity (80.0% similar) in 55 aa overlap (9-63:40-93)
10 20 30
pF1KE5 MDRWYLGGSPKGDVDPFYYDYETVRNGGLIFAGLAFIV
::: . ::: :::.... :::..::. ::.
XP_016 LIRGVPPRTMASLGHILVFCVGLLTMAKAESPK-EHDPFTYDYQSLQIGGLVIAGILFIL
10 20 30 40 50 60
40 50 60
pF1KE5 GLLILLSRRFRCGGNKKRRQINEDEP
:.::.:::: :: :...: . ::
XP_016 GILIVLSRRCRCKFNQQQRTGEPDEEEGTFRSSIRRLSTRRR
70 80 90 100 110
>>XP_016882365 (OMIM: 602359) PREDICTED: phospholemman i (110 aa)
initn: 187 init1: 187 opt: 194 Z-score: 308.7 bits: 61.5 E(85289): 1.9e-10
Smith-Waterman score: 194; 52.7% identity (80.0% similar) in 55 aa overlap (9-63:40-93)
10 20 30
pF1KE5 MDRWYLGGSPKGDVDPFYYDYETVRNGGLIFAGLAFIV
::: . ::: :::.... :::..::. ::.
XP_016 LIRGVPPRTMASLGHILVFCVGLLTMAKAESPK-EHDPFTYDYQSLQIGGLVIAGILFIL
10 20 30 40 50 60
40 50 60
pF1KE5 GLLILLSRRFRCGGNKKRRQINEDEP
:.::.:::: :: :...: . ::
XP_016 GILIVLSRRCRCKFNQQQRTGEPDEEEGTFRSSIRRLSTRRR
70 80 90 100 110
>>NP_071286 (OMIM: 606683) FXYD domain-containing ion tr (95 aa)
initn: 203 init1: 185 opt: 188 Z-score: 300.4 bits: 59.7 E(85289): 5.4e-10
Smith-Waterman score: 188; 51.0% identity (82.4% similar) in 51 aa overlap (13-63:26-76)
10 20 30 40
pF1KE5 MDRWYLGGSPKGDVDPFYYDYETVRNGGLIFAGLAFIVGLLILLSRR
..:::.:::.:.: :::.:: . : ::.:..::::
NP_071 MELVLVFLCSLLAPMVLASAAEKEKEMDPFHYDYQTLRIGGLVFAVVLFSVGILLILSRR
10 20 30 40 50 60
50 60
pF1KE5 FRCGGNKKRRQINEDEP
.:. :.: : ...:
NP_071 CKCSFNQKPRAPGDEEAQVENLITANATEPQKAEN
70 80 90
64 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 21:59:10 2016 done: Mon Nov 7 21:59:10 2016
Total Scan time: 3.410 Total Display time: -0.020
Function used was FASTA [36.3.4 Apr, 2011]