Result of FASTA (ccds) for
pFN21AE5129
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE5129, 164 aa
1>>>pF1KE5129 164 - 164 aa - 164 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.3654+/-0.000856; mu= 10.8201+/- 0.051
mean_var=55.6056+/-11.122, 0's: 0 Z-trim(105.3): 35 B-trim: 0 in 0/48
Lambda= 0.171995
statistics sampled from 8309 (8344) to 8309 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.649), E-opt: 0.2 (0.256), width: 16
Scan time: 1.690
The best scores are: opt bits E(32554)
CCDS76197.1 PPIAL4A gene_id:653505|Hs108|chr1 ( 164) 1109 283.2 4.8e-77
CCDS72898.1 PPIAL4C gene_id:653598|Hs108|chr1 ( 164) 1083 276.8 4.2e-75
CCDS76202.1 PPIAL4F gene_id:728945|Hs108|chr1 ( 164) 1074 274.5 2e-74
CCDS76201.1 PPIAL4E gene_id:730262|Hs108|chr1 ( 164) 1074 274.5 2e-74
CCDS41375.2 PPIAL4G gene_id:644591|Hs108|chr1 ( 164) 1068 273.0 5.6e-74
CCDS59199.1 PPIAL4D gene_id:645142|Hs108|chr1 ( 164) 1066 272.6 7.9e-74
CCDS5494.1 PPIA gene_id:5478|Hs108|chr7 ( 165) 966 247.7 2.3e-66
CCDS7358.1 PPIF gene_id:10105|Hs108|chr10 ( 207) 778 201.1 3.2e-52
CCDS443.1 PPIE gene_id:10450|Hs108|chr1 ( 301) 701 182.0 2.5e-46
CCDS2079.1 RANBP2 gene_id:5903|Hs108|chr2 (3224) 659 171.9 3.1e-42
CCDS442.1 PPIE gene_id:10450|Hs108|chr1 ( 296) 635 165.7 2.1e-41
CCDS53299.1 PPIE gene_id:10450|Hs108|chr1 ( 314) 635 165.7 2.2e-41
CCDS75592.1 PPIA gene_id:5478|Hs108|chr7 ( 105) 622 162.3 7.6e-41
CCDS10191.1 PPIB gene_id:5479|Hs108|chr15 ( 216) 582 152.5 1.4e-37
CCDS3801.1 PPID gene_id:5481|Hs108|chr4 ( 370) 578 151.6 4.7e-37
CCDS4133.1 PPIC gene_id:5480|Hs108|chr5 ( 212) 549 144.3 4.1e-35
CCDS469.1 PPIH gene_id:10465|Hs108|chr1 ( 177) 544 143.0 8.3e-35
CCDS2235.1 PPIG gene_id:9360|Hs108|chr2 ( 754) 461 122.6 5e-28
CCDS2702.1 NKTR gene_id:4820|Hs108|chr3 (1462) 457 121.7 1.8e-27
CCDS69169.1 PPIL6 gene_id:285755|Hs108|chr6 ( 279) 401 107.6 6.1e-24
CCDS5074.1 PPIL6 gene_id:285755|Hs108|chr6 ( 311) 401 107.6 6.7e-24
CCDS81308.1 PPIH gene_id:10465|Hs108|chr1 ( 134) 395 106.0 8.6e-24
CCDS4826.1 PPIL1 gene_id:51645|Hs108|chr6 ( 166) 378 101.8 2e-22
CCDS2333.1 PPIL3 gene_id:53938|Hs108|chr2 ( 161) 342 92.9 9.3e-20
CCDS64162.1 PPWD1 gene_id:23398|Hs108|chr5 ( 490) 345 93.8 1.6e-19
CCDS64161.1 PPWD1 gene_id:23398|Hs108|chr5 ( 616) 345 93.8 1.9e-19
CCDS3985.1 PPWD1 gene_id:23398|Hs108|chr5 ( 646) 345 93.8 2e-19
CCDS13793.1 PPIL2 gene_id:23759|Hs108|chr22 ( 520) 320 87.6 1.2e-17
CCDS46670.1 PPIL2 gene_id:23759|Hs108|chr22 ( 527) 320 87.6 1.2e-17
CCDS75252.1 CWC27 gene_id:10283|Hs108|chr5 ( 381) 281 77.9 7.4e-15
CCDS3982.2 CWC27 gene_id:10283|Hs108|chr5 ( 472) 281 77.9 9.1e-15
CCDS2332.1 PPIL3 gene_id:53938|Hs108|chr2 ( 165) 249 69.8 8.4e-13
>>CCDS76197.1 PPIAL4A gene_id:653505|Hs108|chr1 (164 aa)
initn: 1109 init1: 1109 opt: 1109 Z-score: 1496.6 bits: 283.2 E(32554): 4.8e-77
Smith-Waterman score: 1109; 100.0% identity (100.0% similar) in 164 aa overlap (1-164:1-164)
10 20 30 40 50 60
pF1KE5 MVNSVVFFDITVDGKPLGRISIKLFADKILKTAENFRALSTGEKGFRYKGSCFHRIIPGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 MVNSVVFFDITVDGKPLGRISIKLFADKILKTAENFRALSTGEKGFRYKGSCFHRIIPGF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 MCQGGDFTRHNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICAAKTE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 MCQGGDFTRHNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICAAKTE
70 80 90 100 110 120
130 140 150 160
pF1KE5 WLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQF
::::::::::::::::::::::::::::::::::::::::::::
CCDS76 WLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQF
130 140 150 160
>>CCDS72898.1 PPIAL4C gene_id:653598|Hs108|chr1 (164 aa)
initn: 1083 init1: 1083 opt: 1083 Z-score: 1461.8 bits: 276.8 E(32554): 4.2e-75
Smith-Waterman score: 1083; 98.2% identity (98.8% similar) in 164 aa overlap (1-164:1-164)
10 20 30 40 50 60
pF1KE5 MVNSVVFFDITVDGKPLGRISIKLFADKILKTAENFRALSTGEKGFRYKGSCFHRIIPGF
::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::
CCDS72 MVNSVVFFDITVDGKPLGRISIKLFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 MCQGGDFTRHNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICAAKTE
::::::::: :::::::::::::::::::::::::::::::::::::::::::::.::::
CCDS72 MCQGGDFTRPNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICTAKTE
70 80 90 100 110 120
130 140 150 160
pF1KE5 WLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQF
::::::::::::::::::::::::::::::::::::::::::::
CCDS72 WLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQF
130 140 150 160
>>CCDS76202.1 PPIAL4F gene_id:728945|Hs108|chr1 (164 aa)
initn: 1074 init1: 1074 opt: 1074 Z-score: 1449.7 bits: 274.5 E(32554): 2e-74
Smith-Waterman score: 1074; 97.6% identity (98.2% similar) in 164 aa overlap (1-164:1-164)
10 20 30 40 50 60
pF1KE5 MVNSVVFFDITVDGKPLGRISIKLFADKILKTAENFRALSTGEKGFRYKGSCFHRIIPGF
::::::::.:: ::::::::::::::::: ::::::::::::::::::::::::::::::
CCDS76 MVNSVVFFEITRDGKPLGRISIKLFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 MCQGGDFTRHNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICAAKTE
::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 MCQGGDFTRPNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICAAKTE
70 80 90 100 110 120
130 140 150 160
pF1KE5 WLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQF
::::::::::::::::::::::::::::::::::::::::::::
CCDS76 WLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQF
130 140 150 160
>>CCDS76201.1 PPIAL4E gene_id:730262|Hs108|chr1 (164 aa)
initn: 1074 init1: 1074 opt: 1074 Z-score: 1449.7 bits: 274.5 E(32554): 2e-74
Smith-Waterman score: 1074; 97.6% identity (98.2% similar) in 164 aa overlap (1-164:1-164)
10 20 30 40 50 60
pF1KE5 MVNSVVFFDITVDGKPLGRISIKLFADKILKTAENFRALSTGEKGFRYKGSCFHRIIPGF
::::::::.:: ::::::::::::::::: ::::::::::::::::::::::::::::::
CCDS76 MVNSVVFFEITRDGKPLGRISIKLFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 MCQGGDFTRHNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICAAKTE
::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 MCQGGDFTRPNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICAAKTE
70 80 90 100 110 120
130 140 150 160
pF1KE5 WLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQF
::::::::::::::::::::::::::::::::::::::::::::
CCDS76 WLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQF
130 140 150 160
>>CCDS41375.2 PPIAL4G gene_id:644591|Hs108|chr1 (164 aa)
initn: 1068 init1: 1068 opt: 1068 Z-score: 1441.6 bits: 273.0 E(32554): 5.6e-74
Smith-Waterman score: 1068; 96.3% identity (98.2% similar) in 164 aa overlap (1-164:1-164)
10 20 30 40 50 60
pF1KE5 MVNSVVFFDITVDGKPLGRISIKLFADKILKTAENFRALSTGEKGFRYKGSCFHRIIPGF
:::::.::::::::::::::::: ::::: ::::::::::::::::::::::::::::::
CCDS41 MVNSVIFFDITVDGKPLGRISIKQFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 MCQGGDFTRHNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICAAKTE
::::::::. :::::::::::::::::::::::::::::::::::::::::::::.::::
CCDS41 MCQGGDFTHPNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICTAKTE
70 80 90 100 110 120
130 140 150 160
pF1KE5 WLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQF
::::::::::::::::::::::::::::::::::::::::::::
CCDS41 WLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQF
130 140 150 160
>>CCDS59199.1 PPIAL4D gene_id:645142|Hs108|chr1 (164 aa)
initn: 1066 init1: 1066 opt: 1066 Z-score: 1439.0 bits: 272.6 E(32554): 7.9e-74
Smith-Waterman score: 1066; 97.0% identity (97.6% similar) in 164 aa overlap (1-164:1-164)
10 20 30 40 50 60
pF1KE5 MVNSVVFFDITVDGKPLGRISIKLFADKILKTAENFRALSTGEKGFRYKGSCFHRIIPGF
::::::::.:: ::::::::::::::::: ::::::::::::::::::::::::::::::
CCDS59 MVNSVVFFEITRDGKPLGRISIKLFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 MCQGGDFTRHNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICAAKTE
::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 MCQGGDFTRPNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICAAKTE
70 80 90 100 110 120
130 140 150 160
pF1KE5 WLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQF
::::::::::::::::::::: ::::::::::::::::::::::
CCDS59 WLDGKHVAFGKVKERVNIVEATEHFGYRNSKTSKKITIADCGQF
130 140 150 160
>>CCDS5494.1 PPIA gene_id:5478|Hs108|chr7 (165 aa)
initn: 984 init1: 966 opt: 966 Z-score: 1304.8 bits: 247.7 E(32554): 2.3e-66
Smith-Waterman score: 966; 86.0% identity (95.1% similar) in 164 aa overlap (1-164:1-164)
10 20 30 40 50 60
pF1KE5 MVNSVVFFDITVDGKPLGRISIKLFADKILKTAENFRALSTGEKGFRYKGSCFHRIIPGF
::: .:::::.:::.::::.:..:::::. :::::::::::::::: :::::::::::::
CCDS54 MVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 MCQGGDFTRHNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICAAKTE
:::::::::::::: ::::::::.:::.: :::: ::::::::::::::::::::.::::
CCDS54 MCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTE
70 80 90 100 110 120
130 140 150 160
pF1KE5 WLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQF
:::::::.:::::: .:::::::.:: ::.:::::::::::::.
CCDS54 WLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQLE
130 140 150 160
>>CCDS7358.1 PPIF gene_id:10105|Hs108|chr10 (207 aa)
initn: 767 init1: 748 opt: 778 Z-score: 1051.1 bits: 201.1 E(32554): 3.2e-52
Smith-Waterman score: 778; 66.7% identity (87.0% similar) in 162 aa overlap (3-164:45-206)
10 20 30
pF1KE5 MVNSVVFFDITVDGKPLGRISIKLFADKILKT
: .:..:. ..::::::. ..: :: . ::
CCDS73 SVPRSVPLRLPAARACSKGSGDPSSSSSSGNPLVYLDVDANGKPLGRVVLELKADVVPKT
20 30 40 50 60 70
40 50 60 70 80 90
pF1KE5 AENFRALSTGEKGFRYKGSCFHRIIPGFMCQGGDFTRHNGTGDKSIYGEKFDDENLIRKH
::::::: :::::: :::: :::.::.::::.:::: ::::: ::::: .: :::. ::
CCDS73 AENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYGSRFPDENFTLKH
80 90 100 110 120 130
100 110 120 130 140 150
pF1KE5 TGSGILSMANAGPNTNGSQFFICAAKTEWLDGKHVAFGKVKERVNIVEAMEHFGYRNSKT
.: :.::::::::::::::::::. ::.:::::::.::.::: ...:. .: :: ....:
CCDS73 VGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVKEGMDVVKKIESFGSKSGRT
140 150 160 170 180 190
160
pF1KE5 SKKITIADCGQF
::::.:.::::.
CCDS73 SKKIVITDCGQLS
200
>>CCDS443.1 PPIE gene_id:10450|Hs108|chr1 (301 aa)
initn: 707 init1: 689 opt: 701 Z-score: 945.1 bits: 182.0 E(32554): 2.5e-46
Smith-Waterman score: 701; 61.7% identity (80.9% similar) in 162 aa overlap (3-164:139-300)
10 20 30
pF1KE5 MVNSVVFFDITVDGKPLGRISIKLFADKILKT
: :..:: . .:: :::.. : .: . :
CCDS44 TLEENKEEEGSEPPKAETQEGEPIAKKARSNPQVYMDIKIGNKPAGRIQMLLRSDVVPMT
110 120 130 140 150 160
40 50 60 70 80 90
pF1KE5 AENFRALSTGEKGFRYKGSCFHRIIPGFMCQGGDFTRHNGTGDKSIYGEKFDDENLIRKH
::::: : : :::: .::: :::::: ::::::::: ::::: :::::.::::::.: ::
CCDS44 AENFRCLCTHEKGFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKH
170 180 190 200 210 220
100 110 120 130 140 150
pF1KE5 TGSGILSMANAGPNTNGSQFFICAAKTEWLDGKHVAFGKVKERVNIVEAMEHFGYRNSKT
:: :.:::::.::::::::::. ::.:::::::.::.: : ..... .: : ...:
CCDS44 TGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEAQGSKDGKP
230 240 250 260 270 280
160
pF1KE5 SKKITIADCGQF
..:. :::::..
CCDS44 KQKVIIADCGEYV
290 300
>>CCDS2079.1 RANBP2 gene_id:5903|Hs108|chr2 (3224 aa)
initn: 659 init1: 659 opt: 659 Z-score: 871.7 bits: 171.9 E(32554): 3.1e-42
Smith-Waterman score: 659; 59.0% identity (82.6% similar) in 161 aa overlap (3-163:3063-3223)
10 20 30
pF1KE5 MVNSVVFFDITVDGKPLGRISIKLFADKILKT
: :::::. .::.:::::...::.. . .:
CCDS20 FKKTFEECQQNLMKLQKGHVSLAAELSKETNPVVFFDVCADGEPLGRITMELFSNIVPRT
3040 3050 3060 3070 3080 3090
40 50 60 70 80 90
pF1KE5 AENFRALSTGEKGFRYKGSCFHRIIPGFMCQGGDFTRHNGTGDKSIYGEKFDDENLIRKH
::::::: :::::: .:.: :::.:: :.:::::.:.:.::: .::::.::.:::. ::
CCDS20 AENFRALCTGEKGFGFKNSIFHRVIPDFVCQGGDITKHDGTGGQSIYGDKFEDENFDVKH
3100 3110 3120 3130 3140 3150
100 110 120 130 140 150
pF1KE5 TGSGILSMANAGPNTNGSQFFICAAKTEWLDGKHVAFGKVKERVNIVEAMEHFGYRNSKT
:: :.::::: : :::.::: : :.: :: :::.:: ::. .. :. .: :: ....
CCDS20 TGPGLLSMANQGQNTNNSQFVITLKKAEHLDFKHVVFGFVKDGMDTVKKIESFGSPKGSV
3160 3170 3180 3190 3200 3210
160
pF1KE5 SKKITIADCGQF
..:::..:::
CCDS20 CRRITITECGQI
3220
164 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 07:19:25 2016 done: Tue Nov 8 07:19:26 2016
Total Scan time: 1.690 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]